LongBench v2 / 66f2a414821e116aacb2a3af / Which model is best suited for identifying genes related to neuron migration,…

organism, All Antimicrobials,amikacin,amoxicillin_clavulanicacid,ampicillin,ampicillin_sulbactum,cefaperazone_sulbactum,cefexime,cefotaxime,cefoxitin,ceftazidime,ceftazidime_clavalunicacid,ceftriaxone,chloramphenicol,ciprofloxacin,colistin,cotrimoxazole,ertapenem,erythromycin,gentamicin_highlevel,imipenem,levofloxacin,linezolid,meropenem,netilmicin,nitrofurantoin,penicillin,piperacillin_tazobactum,rifampicin,teicoplanin,tetracycline,ticarcillin_clavulanicacid,tigecycline,vancomycin
acinetobacter,254,7,3,0,0,117,0,7,0,5,0,0,1,9,53,0,0,0,0,14,0,0,20,3,0,0,13,0,0,0,0,2,0
citrobacter,18,1,0,0,0,2,0,1,0,1,0,0,0,1,3,0,0,0,0,3,0,0,2,1,0,0,3,0,0,0,0,0,0
coagulase negative staphylococcus,80,6,7,0,0,0,0,0,6,0,0,0,0,5,0,6,0,1,0,0,0,13,0,10,0,1,0,0,12,0,0,0,13
enterobacter,73,8,2,0,0,11,0,5,0,3,0,0,0,9,5,0,0,0,0,8,0,0,7,4,1,0,10,0,0,0,0,0,0
enterococcus,35,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,1,1,1,0,10,1,0,2,2,1,0,6,1,0,0,6
escherichia,206,26,2,0,0,20,0,3,0,3,0,0,7,3,30,0,0,0,0,42,0,0,29,22,3,0,13,0,0,0,0,3,0
klebsiella,321,25,8,0,0,33,0,11,0,13,0,0,5,24,57,0,0,0,0,53,0,0,36,18,2,0,29,0,0,1,0,5,1
methicillin sensitive staphylococcus aureus(mssa),7,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1
pseudomonas,726,90,2,0,0,123,0,5,0,93,0,0,1,94,53,1,0,0,0,79,0,0,75,6,0,0,104,0,0,0,0,0,0
serratia marcescens,17,2,0,0,0,2,1,1,0,2,0,0,0,2,1,0,0,0,0,2,0,0,2,0,0,0,2,0,0,0,0,0,0
staphyloccus hemolyticus (ms-cons),19,2,2,0,0,0,0,0,2,0,0,0,0,2,0,2,0,0,0,0,0,2,0,2,0,1,0,0,2,0,0,0,2
staphylococcus aureus,101,13,3,0,0,0,0,0,11,0,0,0,0,3,0,11,0,4,0,0,0,13,0,13,0,2,0,4,12,0,0,0,12
staphylococcus aureus(mssa),24,3,3,0,0,0,0,0,3,0,0,0,0,0,0,1,0,1,0,0,0,3,0,3,0,1,0,0,3,0,0,0,3
staphylococcus epidermidis,16,1,1,0,0,0,0,0,2,0,0,0,0,2,0,0,0,1,0,0,0,2,0,1,0,2,0,0,2,0,0,0,2
stenotnophomonas maltophilia,6,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,2,0,0,0,0,0,1,0,0,0,1,0,0


root,component,points,ontology,depth
F00,Dementia in Alzheimer's disease,7.1,ICD10_UMLS,0
G81,Hemiplegia,4.4,ICD10_UMLS,0
G30,Alzheimer's disease,4,ICD10_UMLS,0
I69,Sequelae of cerebrovascular disease (secondary codes),3.7,ICD10_UMLS,0
R29,Other symptoms and signs involving the nervous and musculoskeletal systems (R29.6 Tendency to fall),3.6,ICD10_UMLS,0
N39,Other disorders of urinary system (includes urinary tract infection and urinary incontinence),3.2,ICD10_UMLS,0
F05,"Delirium, not induced by alcohol and other psychoactive substances",3.2,ICD10_UMLS,0
W19,Unspecified fall,3.2,ICD10_UMLS,0
S00,Superficial injury of head,3.2,ICD10_UMLS,0
R31,Unspecified haematuria,3,ICD10_UMLS,0
B96,Other bacterial agents as the cause of diseases classified to other chapters (secondary code),2.9,ICD10_UMLS,0
R41,Other symptoms and signs involving cognitive functions and awareness,2.7,ICD10_UMLS,0
R26,Abnormalities of gait and mobility,2.6,ICD10_UMLS,0
I67,Other cerebrovascular diseases,2.6,ICD10_UMLS,0
R56,"Convulsions, not elsewhere classified",2.6,ICD10_UMLS,0
R40,"Somnolence, stupor and coma",2.5,ICD10_UMLS,0
T83,"Complications of genitourinary prosthetic devices, implants and grafts",2.4,ICD10_UMLS,0
S06,Intracranial injury,2.4,ICD10_UMLS,0
S42,Fracture of shoulder and upper arm,2.3,ICD10_UMLS,0
E87,"Other disorders of fluid, electrolyte and acid-base balance",2.3,ICD10_UMLS,0
M25,"Other joint disorders, not elsewhere classified",2.3,ICD10_UMLS,0
E86,Volume depletion,2.3,ICD10_UMLS,0
R54,Senility,2.2,ICD10_UMLS,0
Z50,Care involving use of rehabilitation procedures,2.1,ICD10_UMLS,0
F03,Unspecified dementia,2.1,ICD10_UMLS,0
W18,Other fall on same level,2.1,ICD10_UMLS,0
Z75,Problems related to medical facilities and other health care,2,ICD10_UMLS,0
F01,Vascular dementia,2,ICD10_UMLS,0
S80,Superficial injury of lower leg,2,ICD10_UMLS,0
L03,Cellulitis,2,ICD10_UMLS,0
H54,Blindness and low vision,1.9,ICD10_UMLS,0
E53,Deficiency of other B group vitamins,1.9,ICD10_UMLS,0
Z60,Problems related to social environment,1.8,ICD10_UMLS,0
G20,Parkinson's disease,1.8,ICD10_UMLS,0
R55,Syncope and collapse,1.8,ICD10_UMLS,0
S22,"Fracture of rib(s), sternum and thoracic spine",1.8,ICD10_UMLS,0
K59,Other functional intestinal disorders,1.8,ICD10_UMLS,0
N17,Acute renal failure,1.8,ICD10_UMLS,0
L89,Decubitus ulcer,1.7,ICD10_UMLS,0
Z22,Carrier of infectious disease,1.7,ICD10_UMLS,0
B95,Streptococcus and staphylococcus as the cause of diseases classified to other chapters,1.7,ICD10_UMLS,0
L97,"Ulcer of lower limb, not elsewhere classified",1.6,ICD10_UMLS,0
R44,Other symptoms and signs involving general sensations and perceptions,1.6,ICD10_UMLS,0
K26,Duodenal ulcer,1.6,ICD10_UMLS,0
I95,Hypotension,1.6,ICD10_UMLS,0
N19,Unspecified renal failure,1.6,ICD10_UMLS,0
A41,Other septicaemia,1.6,ICD10_UMLS,0
Z87,Personal history of other diseases and conditions,1.5,ICD10_UMLS,0
J96,"Respiratory failure, not elsewhere classified",1.5,ICD10_UMLS,0
X59,Exposure to unspecified factor,1.5,ICD10_UMLS,0
M19,Other arthrosis,1.5,ICD10_UMLS,0
G40,Epilepsy,1.5,ICD10_UMLS,0
M81,Osteoporosis without pathological fracture,1.4,ICD10_UMLS,0
S72,Fracture of femur,1.4,ICD10_UMLS,0
S32,Fracture of lumbar spine and pelvis,1.4,ICD10_UMLS,0
E16,Other disorders of pancreatic internal secretion,1.4,ICD10_UMLS,0
R94,Abnormal results of function studies,1.4,ICD10_UMLS,0
N18,Chronic renal failure,1.4,ICD10_UMLS,0
R33,Retention of urine,1.3,ICD10_UMLS,0
R69,Unknown and unspecified causes of morbidity,1.3,ICD10_UMLS,0
N28,"Other disorders of kidney and ureter, not elsewhere classified",1.3,ICD10_UMLS,0
R32,Unspecified urinary incontinence,1.2,ICD10_UMLS,0
G31,"Other degenerative diseases of nervous system, not elsewhere classified",1.2,ICD10_UMLS,0
Y95,Nosocomial condition,1.2,ICD10_UMLS,0
S09,Other and unspecified injuries of head,1.2,ICD10_UMLS,0
R45,Symptoms and signs involving emotional state,1.2,ICD10_UMLS,0
G45,Transient cerebral ischaemic attacks and related syndromes,1.2,ICD10_UMLS,0
Z74,Problems related to care-provider dependency,1.1,ICD10_UMLS,0
M79,"Other soft tissue disorders, not elsewhere classified",1.1,ICD10_UMLS,0
W06,Fall involving bed,1.1,ICD10_UMLS,0
S01,Open wound of head,1.1,ICD10_UMLS,0
A04,Other bacterial intestinal infections,1.1,ICD10_UMLS,0
A09,Diarrhoea and gastroenteritis of presumed infectious origin,1.1,ICD10_UMLS,0
J18,"Pneumonia, organism unspecified",1.1,ICD10_UMLS,0
J69,Pneumonitis due to solids and liquids,1,ICD10_UMLS,0
R47,"Speech disturbances, not elsewhere classified",1,ICD10_UMLS,0
E55,Vitamin D deficiency,1,ICD10_UMLS,0
Z93,Artificial opening status,1,ICD10_UMLS,0
R02,"Gangrene, not elsewhere classified",1,ICD10_UMLS,0
R63,Symptoms and signs concerning food and fluid intake,0.9,ICD10_UMLS,0
H91,Other hearing loss,0.9,ICD10_UMLS,0
W10,Fall on and from stairs and steps,0.9,ICD10_UMLS,0
W01,"Fall on same level from slipping, tripping and stumbling",0.9,ICD10_UMLS,0
E05,Thyrotoxicosis [hyperthyroidism],0.9,ICD10_UMLS,0
M41,Scoliosis,0.9,ICD10_UMLS,0
R13,Dysphagia,0.8,ICD10_UMLS,0
Z99,Dependence on enabling machines and devices,0.8,ICD10_UMLS,0
U80,Agent resistant to penicillin and related antibiotics,0.8,ICD10_UMLS,0
M80,Osteoporosis with pathological fracture,0.8,ICD10_UMLS,0
K92,Other diseases of digestive system,0.8,ICD10_UMLS,0
I63,Cerebral Infarction,0.8,ICD10_UMLS,0
N20,Calculus of kidney and ureter,0.7,ICD10_UMLS,0
F10,Mental and behavioural disorders due to use of alcohol,0.7,ICD10_UMLS,0
Y84,Other medical procedures as the cause of abnormal reaction of the patient,0.7,ICD10_UMLS,0
R00,Abnormalities of heart beat,0.7,ICD10_UMLS,0
J22,Unspecified acute lower respiratory infection,0.7,ICD10_UMLS,0
Z73,Problems related to life-management difficulty,0.6,ICD10_UMLS,0
R79,Other abnormal findings of blood chemistry,0.6,ICD10_UMLS,0
Z91,"Personal history of risk-factors, not elsewhere classified",0.5,ICD10_UMLS,0
S51,Open wound of forearm,0.5,ICD10_UMLS,0
F32,Depressive episode,0.5,ICD10_UMLS,0
M48,Spinal stenosis (secondary code only),0.5,ICD10_UMLS,0
E83,Disorders of mineral metabolism,0.4,ICD10_UMLS,0
M15,Polyarthrosis,0.4,ICD10_UMLS,0
D64,Other anaemias,0.4,ICD10_UMLS,0
L08,Other local infections of skin and subcutaneous tissue,0.4,ICD10_UMLS,0
R11,Nausea and vomiting,0.3,ICD10_UMLS,0
K52,Other noninfective gastroenteritis and colitis,0.3,ICD10_UMLS,0
R50,Fever of unknown origin,0.1,ICD10_UMLS,0

id,occurrenceID,samplingProtocol,organismName,basisOfRecord,decimalLatitude,decimalLongitude,eventDate,geodeticDatum,lifeStage,occurrenceRemarks,reproductiveCondition,sex,scientificName,scientificNameID,taxonRank,datasetID,license
F53:capture1,F53:capture1,capture,F53,HumanObservation,38.2853475,-112.0255436,2014-02-11T00:00:00.000+00:00,WGS84,adult,,reproductive w/1+ dependent cub,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:recovery1,F53:recovery1,bio-logging sensor recovery,F53,HumanObservation,38.4398889,-111.9790506,2014-11-05T00:00:00.000+00:00T,WGS84,adult,Collar removed. Alive at the time of collar recovery.,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IdCoy_P3_1:capture1,IdCoy_P3_1:capture1,capture,IdCoy_P3_1,HumanObservation,43.805269310754184,-112.7119061888433,2004-12-27T00:00:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IdCoy_P3_1:recovery1,IdCoy_P3_1:recovery1,bio-logging sensor recovery,IdCoy_P3_1,HumanObservation,43.81886351026955,-112.70294808352044,2005-02-04T23:59:00.000+00:00,WGS84,,Collar removed.,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IdCoy_P3_1:capture2,IdCoy_P3_1:capture2,capture,IdCoy_P3_1,HumanObservation,43.802316306974156,-112.68706977879135,2005-05-06T00:00:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IdCoy_P3_1:recovery2,IdCoy_P3_1:recovery2,bio-logging sensor recovery,IdCoy_P3_1,HumanObservation,43.79943410541192,-112.72638509515035,2005-06-29T23:59:00.000+00:00,WGS84,,Collar removed.,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295519,GPS fix,F53,MachineObservation,38.2853475,-112.0255436,2014-02-11T21:35:42.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295520,GPS fix,F53,MachineObservation,38.2852533,-112.0256839,2014-02-11T23:01:01.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295521,GPS fix,F53,MachineObservation,38.2855722,-112.0256444,2014-02-12T03:01:18.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295522,GPS fix,F53,MachineObservation,38.2854494,-112.0256564,2014-02-12T07:00:59.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295523,GPS fix,F53,MachineObservation,38.2856031,-112.0256297,2014-02-12T11:01:08.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295524,GPS fix,F53,MachineObservation,38.2866822,-112.0258236,2014-02-12T15:01:12.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295525,GPS fix,F53,MachineObservation,38.2875511,-112.0259192,2014-02-12T19:00:59.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295526,GPS fix,F53,MachineObservation,38.2882522,-112.0228786,2014-02-13T03:01:00.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295527,GPS fix,F53,MachineObservation,38.2903081,-112.0165386,2014-02-13T07:01:32.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295528,GPS fix,F53,MachineObservation,38.2820444,-111.9918983,2014-02-13T11:01:12.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578077,GPS fix,IdCoy_P3_1,MachineObservation,43.805269310754184,-112.7119061888433,2004-12-27T12:01:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578078,GPS fix,IdCoy_P3_1,MachineObservation,43.805253804358244,-112.71187868758769,2004-12-27T12:05:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578079,GPS fix,IdCoy_P3_1,MachineObservation,43.805254611303425,-112.71179898779434,2004-12-27T12:10:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578080,GPS fix,IdCoy_P3_1,MachineObservation,43.80522270918354,-112.7117702884922,2004-12-27T12:15:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578081,GPS fix,IdCoy_P3_1,MachineObservation,43.805277413057865,-112.7116772880469,2004-12-27T12:21:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578082,GPS fix,IdCoy_P3_1,MachineObservation,43.805128005490175,-112.71169478785248,2004-12-27T12:25:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578083,GPS fix,IdCoy_P3_1,MachineObservation,43.80518740520675,-112.71180398777118,2004-12-27T12:30:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578084,GPS fix,IdCoy_P3_1,MachineObservation,43.80520991319645,-112.71169648832122,2004-12-27T12:35:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578085,GPS fix,IdCoy_P3_1,MachineObservation,43.80526351166072,-112.71174758819863,2004-12-27T12:40:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578086,GPS fix,IdCoy_P3_1,MachineObservation,43.80522300704765,-112.71173898820605,2004-12-27T12:45:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447281,GPS fix,IdCoy_P3_1,MachineObservation,43.802316306974156,-112.68706977879135,2005-05-06T12:01:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447282,GPS fix,IdCoy_P3_1,MachineObservation,43.80214740376405,-112.68693647895746,2005-05-06T12:05:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447283,GPS fix,IdCoy_P3_1,MachineObservation,43.80225630345771,-112.68685167885121,2005-05-06T12:10:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447284,GPS fix,IdCoy_P3_1,MachineObservation,43.800630705798866,-112.68615727930909,2005-05-06T12:15:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447285,GPS fix,IdCoy_P3_1,MachineObservation,43.79920380945402,-112.6858830785679,2005-05-06T12:20:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447286,GPS fix,IdCoy_P3_1,MachineObservation,43.796385200885524,-112.68515087908295,2005-05-06T12:25:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447287,GPS fix,IdCoy_P3_1,MachineObservation,43.79458020505868,-112.6823283774607,2005-05-06T12:30:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447288,GPS fix,IdCoy_P3_1,MachineObservation,43.793676007286784,-112.6810311777281,2005-05-06T12:35:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447289,GPS fix,IdCoy_P3_1,MachineObservation,43.79213910405195,-112.679266176522,2005-05-06T12:40:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447290,GPS fix,IdCoy_P3_1,MachineObservation,43.79133100383393,-112.67840417618817,2005-05-06T12:45:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/

"Column name","Requested field","DwC Name","Field name","Field description","Download field name","Download field description","More information"
"data_resource_uid","data_resource_uid","","data_resource_uid","Dataset","data_resource_uid","Data Resource ID","The Atlas ID for the data resource"
"images","images","","images","","images","","Images associated with a record"
"dcterms:language","language","dcterms:language","language","","language","","Language of the record"
"dcterms:license","license","dcterms:license","license","License","license","Licence","The license applying to a record."
"dcterms:rightsHolder","rightsholder","dcterms:rightsHolder","rightsholder","","rightsholder","",""
"access_rights","access_rights","dcterms:accessRights","access_rights","","access_rights","",""
"dcterms:bibliographicCitation","bibliographic_citation","dcterms:bibliographicCitation","bibliographic_citation","","bibliographic_citation","","Bibliographic citation for this record"
"institutionID","institution_id","institutionID","institution_id","Institution ID","institution_id","","http://rs.tdwg.org/dwc/terms/institutionID"
"collectionID","collection_id","collectionID","collection_id","Collection ID","collection_id","","http://rs.tdwg.org/dwc/terms/collectionID"
"datasetID","dataset_id","datasetID","dataset_id","Dataset ID","dataset_id","","http://rs.tdwg.org/dwc/terms/datasetID"
"institutionCode","institution_code","institutionCode","institution_code","Institution Code","institution_code","Institution Code","The institution code for this record. This will be populated if the data has come from a museum or herbaria http://rs.tdwg.org/dwc/terms/institutionCode"
"collectionCode","collection_code","collectionCode","collection_code","Collection Code","collection_code","Collection Code","The collection code for this record. This will be populated if the data has come from a museum or herbaria http://rs.tdwg.org/dwc/terms/collectionCode"
"datasetName","dataset_name","datasetName","dataset_name","Dataset / Survey name","dataset_name","","The name of the dataset for this record. Typically used to share the name of the survey when data has been supplied with multiple surveys in a single data resource. http://rs.tdwg.org/dwc/terms/datasetName"
"ownerInstitutionCode","owner_institution_code","ownerInstitutionCode","owner_institution_code","Owner Institution Code","owner_institution_code","","http://rs.tdwg.org/dwc/terms/ownerInstitutionCode"
"basisOfRecord","basis_of_record","basisOfRecord","basis_of_record","Record type","basis_of_record","Basis Of Record","What this is a record of e.g. specimen, human observation, fossil http://rs.tdwg.org/dwc/terms/basisOfRecord"
"dynamicProperties","dynamic_properties","dynamicProperties","dynamic_properties","Dynamic Properties","dynamic_properties","","http://rs.tdwg.org/dwc/terms/dynamicProperties"
"occurrenceID","occurrence_id","occurrenceID","occurrence_id","Occurrence ID","occurrence_id","","http://rs.tdwg.org/dwc/terms/occurrenceID"
"catalogNumber","catalogue_number","catalogNumber","catalogue_number","Catalogue Number","catalogue_number","Catalogue Number","http://rs.tdwg.org/dwc/terms/catalogNumber"
"recordNumber","record_number","recordNumber","record_number","Record number","record_number","Record number","http://rs.tdwg.org/dwc/terms/recordNumber"
"recordedBy","collector","recordedBy","collector","Collector","collector","Collector","http://rs.tdwg.org/dwc/terms/recordedBy"
"individualCount","individual_count","individualCount","individual_count","Individual count","individual_count","Individual count","http://rs.tdwg.org/dwc/terms/individualCount"
"organism_quantity","organism_quantity","organismQuantity","organism_quantity","Organism Quantity","organism_quantity","","http://rs.tdwg.org/dwc/terms/organismQuantity"
"organism_quantity_type","organism_quantity_type","organismQuantityType","organism_quantity_type","Organism Quantity Type","organism_quantity_type","","http://rs.tdwg.org/dwc/terms/organismQuantityType"
"sex","raw_sex","sex","raw_sex","Sex","raw_sex","Sex","http://rs.tdwg.org/dwc/terms/sex"
"lifeStage","life_stage","lifeStage","life_stage","Life stage","life_stage","","http://rs.tdwg.org/dwc/terms/lifeStage"
"reproductiveCondition","reproductive_condition","reproductiveCondition","reproductive_condition","Reproductive Condition","reproductive_condition","","http://rs.tdwg.org/dwc/terms/reproductiveCondition"
"behavior","behavior","behavior","behavior","Behavior","behavior","","http://rs.tdwg.org/dwc/terms/behavior"
"establishmentMeans","establishment_means","establishmentMeans","establishment_means","Establishment means","establishment_means","","http://rs.tdwg.org/dwc/terms/establishmentMeans"
"occurrenceStatus","occurrence_status","occurrenceStatus","occurrence_status","Presence/Absence","occurrence_status","Occurrence status","A statement about the presence or absence of a taxon at a Location http://rs.tdwg.org/dwc/terms/occurrenceStatus"
"preparations","preparations","preparations","preparations","Preparations","preparations","Preparations","http://rs.tdwg.org/dwc/terms/preparations"
"disposition","disposition","disposition","disposition","Disposition","disposition","","http://rs.tdwg.org/dwc/terms/disposition"
"associatedMedia","associated_media","associatedMedia","associated_media","Associated Media","associated_media","","http://rs.tdwg.org/dwc/terms/associatedMedia"
"associatedReferences","associated_references","associatedReferences","associated_references","Associated References","associated_references","","http://rs.tdwg.org/dwc/terms/associatedReferences"
"associatedSequences","associated_sequences","associatedSequences","associated_sequences","Associated Sequences","associated_sequences","","http://rs.tdwg.org/dwc/terms/associatedSequences"
"associatedTaxa","associated_taxa","associatedTaxa","associated_taxa","Associated Taxa","associated_taxa","","http://rs.tdwg.org/dwc/terms/associatedTaxa"
"otherCatalogNumbers","other_catalog_numbers","otherCatalogNumbers","other_catalog_numbers","Other Catalog Numbers","other_catalog_numbers","","http://rs.tdwg.org/dwc/terms/otherCatalogNumbers"
"occurrenceRemarks","occurrence_remarks","occurrenceRemarks","occurrence_remarks","Occurrence Remarks","occurrence_remarks","","http://rs.tdwg.org/dwc/terms/occurrenceRemarks"
"previousIdentifications","previous_identifications","previousIdentifications","previous_identifications","Previous Identifications","previous_identifications","","http://rs.tdwg.org/dwc/terms/previousIdentifications"
"eventID","event_id","eventID","event_id","Event ID","event_id","","http://rs.tdwg.org/dwc/terms/eventID"
"fieldNumber","field_number","fieldNumber","field_number","Field Number","field_number","","http://rs.tdwg.org/dwc/terms/fieldNumber"
"eventDate","occurrence_date","eventDate","occurrence_date","Date (by decade)","occurrence_date","Event Date - parsed","http://rs.tdwg.org/dwc/terms/eventDate"
"eventTime","event_time","eventTime","event_time","Event Time","event_time","Event Time","http://rs.tdwg.org/dwc/terms/eventTime"
"startDayOfYear","start_day_of_year","startDayOfYear","start_day_of_year","Start Day Of Year","start_day_of_year","","http://rs.tdwg.org/dwc/terms/startDayOfYear"
"endDayOfYear","end_day_of_year","endDayOfYear","end_day_of_year","End Day Of Year","end_day_of_year","","http://rs.tdwg.org/dwc/terms/endDayOfYear"
"year","year","year","year","Year","year","Year","The year in which an occurrence was observed. http://rs.tdwg.org/dwc/terms/year"
"month","month","month","month","Month","month","Month","Month of observation, specimen collection date. http://rs.tdwg.org/dwc/terms/month"
"day","day","day","day","Day","day","Day","http://rs.tdwg.org/dwc/terms/day"
"verbatimEventDate","verbatim_event_date","verbatimEventDate","verbatim_event_date","Verbatim event date","verbatim_event_date","Verbatim event date","http://rs.tdwg.org/dwc/terms/verbatimEventDate"
"habitat","habitat","habitat","habitat","Habitat","habitat","","http://rs.tdwg.org/dwc/terms/habitat"
"samplingProtocol","sampling_protocol","samplingProtocol","sampling_protocol","Sampling Protocol","sampling_protocol","","http://rs.tdwg.org/dwc/terms/samplingProtocol"
"samplingEffort","sampling_effort","samplingEffort","sampling_effort","Sampling Effort","sampling_effort","","http://rs.tdwg.org/dwc/terms/samplingEffort"
"fieldNotes","field_notes","fieldNotes","field_notes","Field Notes","field_notes","","http://rs.tdwg.org/dwc/terms/fieldNotes"
"eventRemarks","event_remarks","eventRemarks","event_remarks","Event Remarks","event_remarks","","http://rs.tdwg.org/dwc/terms/eventRemarks"
"locationID","location_id","locationID","location_id","Location ID","location_id","","http://rs.tdwg.org/dwc/terms/locationID"
"higherGeography","higher_geography","higherGeography","higher_geography","Higher Geography","higher_geography","","http://rs.tdwg.org/dwc/terms/higherGeography"
"continent","continent","continent","continent","Continent","continent","","http://rs.tdwg.org/dwc/terms/continent"
"waterBody","water_body","waterBody","water_body","Water Body","water_body","","http://rs.tdwg.org/dwc/terms/waterBody"
"islandGroup","island_group","islandGroup","island_group","Island Group","island_group","","http://rs.tdwg.org/dwc/terms/islandGroup"
"island","island","island","island","Island","island","","http://rs.tdwg.org/dwc/terms/island"
"country","country","country","country","Country","country","Country - parsed","The country where the specimen was collected or observation was made http://rs.tdwg.org/dwc/terms/country"
"countryCode","country_code","countryCode","country_code","Country Code","country_code","","http://rs.tdwg.org/dwc/terms/countryCode"
"stateProvince","state","stateProvince","state","State/Territory","state","State - parsed","http://rs.tdwg.org/dwc/terms/stateProvince"
"county","county","county","county","County","county","","http://rs.tdwg.org/dwc/terms/county"
"municipality","municipality","municipality","municipality","Municipality","municipality","","http://rs.tdwg.org/dwc/terms/municipality"
"locality","raw_locality","locality","raw_locality","Locality","raw_locality","Locality","http://rs.tdwg.org/dwc/terms/locality"
"verbatimLocality","verbatim_locality","verbatimLocality","verbatim_locality","Verbatim Locality","verbatim_locality","","http://rs.tdwg.org/dwc/terms/verbatimLocality"
"minimumElevationInMeters","min_elevation_d","minimumElevationInMeters","min_elevation_d","Minimum elevation in meters","min_elevation_d","Minimum elevation in meters","http://rs.tdwg.org/dwc/terms/minimumElevationInMeters"
"maximumElevationInMeters","max_elevation_d","maximumElevationInMeters","max_elevation_d","Maximum elevation in meters","max_elevation_d","Maximum elevation in meters","http://rs.tdwg.org/dwc/terms/maximumElevationInMeters"
"verbatimElevation","elevation","verbatimElevation","elevation","Verbatim Elevation","elevation","","http://rs.tdwg.org/dwc/terms/verbatimElevation"
"minimumDepthInMeters","min_depth_d","minimumDepthInMeters","min_depth_d","Minimum depth in meters","min_depth_d","Minimum depth in meters","http://rs.tdwg.org/dwc/terms/minimumDepthInMeters"
"maximumDepthInMeters","max_depth_d","maximumDepthInMeters","max_depth_d","Maximum depth in meters","max_depth_d","Maximum depth in meters","http://rs.tdwg.org/dwc/terms/maximumDepthInMeters"
"locationAccordingTo","location_according_to","locationAccordingTo","location_according_to","Location According To","location_according_to","","http://rs.tdwg.org/dwc/terms/locationAccordingTo"
"locationRemarks","location_remarks","locationRemarks","location_remarks","Location Remarks","location_remarks","","http://rs.tdwg.org/dwc/terms/locationRemarks"
"decimalLatitude","latitude","decimalLatitude","latitude","Latitude","latitude","Latitude","The decimal latitude associated with this record. If the original latitude was supplied in degrees, minutes, seconds, this value represents the converted value. http://rs.tdwg.org/dwc/terms/decimalLatitude"
"decimalLongitude","longitude","decimalLongitude","longitude","Longitude","longitude","Longitude","The decimal longitude associated with this record. If the original longitude was supplied in degrees, minutes, seconds, this value represents the converted value. http://rs.tdwg.org/dwc/terms/decimalLongitude"
"geodeticDatum","datum","geodeticDatum","datum","Geodetic datum","datum","Geodetic datum","http://rs.tdwg.org/dwc/terms/geodeticDatum"
"coordinateUncertaintyInMeters","coordinate_uncertainty","coordinateUncertaintyInMeters","coordinate_uncertainty","Coordinate uncertainty (in metres)","coordinate_uncertainty","Coordinate Uncertainty in Metres","A radius in metres defining the smallest circle the location could occur within http://rs.tdwg.org/dwc/terms/coordinateUncertaintyInMeters"
"coordinatePrecision","coordinate_precision","coordinatePrecision","coordinate_precision","Coordinate Precision","coordinate_precision","Coordinate Precision","http://rs.tdwg.org/dwc/terms/coordinatePrecision"
"verbatimCoordinates","verbatim_coordinates","verbatimCoordinates","verbatim_coordinates","Verbatim Coordinates","verbatim_coordinates","","http://rs.tdwg.org/dwc/terms/verbatimCoordinates"
"verbatimLatitude","raw_latitude","verbatimLatitude","raw_latitude","Latitude - original","raw_latitude","Latitude - original","http://rs.tdwg.org/dwc/terms/verbatimLatitude"
"verbatimLatitude","verbatim_latitude","verbatimLatitude","verbatim_latitude","Verbatim Latitude","verbatim_latitude","","http://rs.tdwg.org/dwc/terms/verbatimLatitude"
"verbatimLongitude","raw_longitude","verbatimLongitude","raw_longitude","Longitude - original","raw_longitude","Longitude - original","http://rs.tdwg.org/dwc/terms/verbatimLongitude"
"verbatimLongitude","verbatim_longitude","verbatimLongitude","verbatim_longitude","Verbatim Longitude","verbatim_longitude","","http://rs.tdwg.org/dwc/terms/verbatimLongitude"
"verbatimCoordinateSystem","raw_datum","verbatimCoordinateSystem","raw_datum","Datum","raw_datum","Geodetic datum - original","http://rs.tdwg.org/dwc/terms/verbatimCoordinateSystem"
"verbatimCoordinateSystem","verbatim_coordinate_system","verbatimCoordinateSystem","verbatim_coordinate_system","Verbatim Coordinate System","verbatim_coordinate_system","","http://rs.tdwg.org/dwc/terms/verbatimCoordinateSystem"
"verbatimSRS","verbatim_srs","verbatimSRS","verbatim_srs","Verbatim SRS","verbatim_srs","","http://rs.tdwg.org/dwc/terms/verbatimSRS"
"footprintWKT","footprint_wkt","footprintWKT","footprint_wkt","Footprint WKT","footprint_wkt","","http://rs.tdwg.org/dwc/terms/footprintWKT"
"footprintSRS","footprint_srs","footprintSRS","footprint_srs","Footprint SRS","footprint_srs","","http://rs.tdwg.org/dwc/terms/footprintSRS"
"georeferencedBy","georeferenced_by","georeferencedBy","georeferenced_by","Georeferenced By","georeferenced_by","","http://rs.tdwg.org/dwc/terms/georeferencedBy"
"georeferencedDate","georeferenced_date","georeferencedDate","georeferenced_date","Georeferenced Date","georeferenced_date","","http://rs.tdwg.org/dwc/terms/georeferencedDate"
"georeferenceProtocol","georeference_protocol","georeferenceProtocol","georeference_protocol","Georeference Protocol","georeference_protocol","","http://rs.tdwg.org/dwc/terms/georeferenceProtocol"
"georeferenceSources","georeference_sources","georeferenceSources","georeference_sources","Georeference Sources","georeference_sources","","http://rs.tdwg.org/dwc/terms/georeferenceSources"
"georeference_verification_status","georeference_verification_status","georeferenceVerificationStatus","georeference_verification_status","Georeference Verification Status","georeference_verification_status","","http://rs.tdwg.org/dwc/terms/georeferenceVerificationStatus"
"georeferenceRemarks","georeference_remarks","georeferenceRemarks","georeference_remarks","Georeference Remarks","georeference_remarks","","http://rs.tdwg.org/dwc/terms/georeferenceRemarks"
"identificationID","identification_id","identificationID","identification_id","Identification ID","identification_id","","http://rs.tdwg.org/dwc/terms/identificationID"
"identificationQualifier","identification_qualifier","identificationQualifier","identification_qualifier","Identification Qualifier","identification_qualifier","","http://rs.tdwg.org/dwc/terms/identificationQualifier"
"typeStatus","type_status","typeStatus","type_status","Specimen type","type_status","","http://rs.tdwg.org/dwc/terms/typeStatus"
"identifiedBy","identified_by","identifiedBy","identified_by","Identified by","identified_by","","http://rs.tdwg.org/dwc/terms/identifiedBy"
"dateIdentified","identified_date","dateIdentified","identified_date","Date Identified","identified_date","","http://rs.tdwg.org/dwc/terms/dateIdentified"
"identificationReferences","identification_references","identificationReferences","identification_references","Identification References","identification_references","","http://rs.tdwg.org/dwc/terms/identificationReferences"
"identificationVerificationStatus","identification_verification_status","identificationVerificationStatus","identification_verification_status","Identification Verification Status","identification_verification_status","","http://rs.tdwg.org/dwc/terms/identificationVerificationStatus"
"identificationRemarks","identification_remarks","identificationRemarks","identification_remarks","Identification Remarks","identification_remarks","","http://rs.tdwg.org/dwc/terms/identificationRemarks"
"taxonID","taxon_id","taxonID","taxon_id","Taxon ID","taxon_id","","http://rs.tdwg.org/dwc/terms/taxonID"
"scientificNameID","scientific_name_id","scientificNameID","scientific_name_id","Scientific Name ID","scientific_name_id","","http://rs.tdwg.org/dwc/terms/scientificNameID"
"taxonConceptID","taxon_concept_lsid","taxonConceptID","taxon_concept_lsid","Taxon Concept GUID","taxon_concept_lsid","Taxon Concept GUID","http://rs.tdwg.org/dwc/terms/taxonConceptID"
"scientificName","raw_taxon_name","scientificName","raw_taxon_name","Scientific name (unprocessed)","raw_taxon_name","Scientific Name - original","http://rs.tdwg.org/dwc/terms/scientificName"
"scientificName","taxon_name","scientificName","taxon_name","Scientific name","taxon_name","Scientific Name","http://rs.tdwg.org/dwc/terms/scientificName"
"acceptedNameUsage","accepted_name_usage","acceptedNameUsage","accepted_name_usage","Accepted Name Usage","accepted_name_usage","","http://rs.tdwg.org/dwc/terms/acceptedNameUsage"
"parentNameUsage","parent_name_usage","parentNameUsage","parent_name_usage","Parent Name Usage","parent_name_usage","","http://rs.tdwg.org/dwc/terms/parentNameUsage"
"originalNameUsage","original_name_usage","originalNameUsage","original_name_usage","Original name usage","original_name_usage","","http://rs.tdwg.org/dwc/terms/originalNameUsage"
"namePublishedIn","name_published_in","namePublishedIn","name_published_in","Name Published In","name_published_in","","http://rs.tdwg.org/dwc/terms/namePublishedIn"
"higherClassification","higher_classification","higherClassification","higher_classification","Higher Classification","higher_classification","","http://rs.tdwg.org/dwc/terms/higherClassification"
"kingdom","kingdom","kingdom","kingdom","Kingdom","kingdom","Kingdom","The kingdom the Atlas has matched this record to in the system classification http://rs.tdwg.org/dwc/terms/kingdom"
"phylum","phylum","phylum","phylum","Phylum","phylum","Phylum","The phylum the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/phylum"
"class","class","class","class","Class","class","Class","The class the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/class"
"order","order","order","order","Order","order","Order","The order the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/order"
"family","family","family","family","Family","family","Family","The family the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/family"
"genus","genus","genus","genus","Genus","genus","Genus","The genus the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/genus"
"subgenus","subgenus","subgenus","subgenus","Subgenus","subgenus","","http://rs.tdwg.org/dwc/terms/subgenus"
"specificEpithet","specific_epithet","specificEpithet","specific_epithet","Specific Epithet","specific_epithet","","http://rs.tdwg.org/dwc/terms/specificEpithet"
"infraspecificEpithet","infraspecific_epithet","infraspecificEpithet","infraspecific_epithet","Infraspecific Epithet","infraspecific_epithet","","http://rs.tdwg.org/dwc/terms/infraspecificEpithet"
"taxonRank","rank","taxonRank","rank","Identified to rank","rank","Taxon Rank","http://rs.tdwg.org/dwc/terms/taxonRank"
"vernacularName","common_name","vernacularName","common_name","Common name (processed)","common_name","Vernacular name","http://rs.tdwg.org/dwc/terms/vernacularName"
"nomenclaturalCode","nomenclatural_code","nomenclaturalCode","nomenclatural_code","Nomenclatural Code","nomenclatural_code","","http://rs.tdwg.org/dwc/terms/nomenclaturalCode"
"taxonomicStatus","taxonomic_status","taxonomicStatus","taxonomic_status","Taxonomic Status","taxonomic_status","","http://rs.tdwg.org/dwc/terms/taxonomicStatus"
"nomenclaturalStatus","nomenclatural_status","nomenclaturalStatus","nomenclatural_status","Nomenclatural Status","nomenclatural_status","","http://rs.tdwg.org/dwc/terms/nomenclaturalStatus"
"taxonRemarks","taxon_remarks","taxonRemarks","taxon_remarks","Taxon Remarks","taxon_remarks","","http://rs.tdwg.org/dwc/terms/taxonRemarks"
"individualID","individual_id","individualID","individual_id","","individual_id","","http://rs.tdwg.org/dwc/terms/individualID"
"identifierRole","identifier_role","identifierRole","identifier_role","","identifier_role","","http://rs.tdwg.org/dwc/terms/identifierRole"
"species","species","species","species","Species","species","Species","The species the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/species"
"measurementID","measurement_id","measurementID","measurement_id","Measurement ID","measurement_id","","http://rs.tdwg.org/dwc/terms/measurementID"
"verbatimIdentificationQualifier","raw_identification_qualifier","verbatimIdentificationQualifier","raw_identification_qualifier","","raw_identification_qualifier","","http://rs.tdwg.org/dwc/terms/verbatimIdentificationQualifier"
"provenance","provenance","dcterms:provenance","provenance","Provenance","provenance","","Provenance of this dataset. e.g. Published dataset, Draft, Individual sightings"
"measurementDeterminedBy","measurement_determined_by","measurementDeterminedBy","measurement_determined_by","Measurement Determined By","measurement_determined_by","","http://rs.tdwg.org/dwc/terms/measurementDeterminedBy"
"measurementDeterminedDate","measurement_determined_date","measurementDeterminedDate","measurement_determined_date","Measurement Determined Date","measurement_determined_date","","http://rs.tdwg.org/dwc/terms/measurementDeterminedDate"
"recordID","id","recordID","id","Record ID","id","Record ID","Atlas unique ID for this record http://rs.tdwg.org/dwc/terms/recordID"
"dcterms:accessRights","rights","dcterms:rights","rights","","rights","",""
"source","source","dcterms:source","source","","source","",""
"measurementValue","measurement_value","measurementValue","measurement_value","Measurement Value","measurement_value","","http://rs.tdwg.org/dwc/terms/measurementValue"
"relationship_remarks","relationship_remarks","relationshipRemarks","relationship_remarks","Relationship Remarks","relationship_remarks","","http://rs.tdwg.org/dwc/terms/relationshipRemarks"
"verbatimContinent","raw_continent","verbatimContinent","raw_continent","","raw_continent","","http://rs.tdwg.org/dwc/terms/verbatimContinent"
"relatedResourceID","related_resource_id","relatedResourceID","related_resource_id","Related Resource ID","related_resource_id","","http://rs.tdwg.org/dwc/terms/relatedResourceID"
"measurementAccuracy","measurement_accuracy","measurementAccuracy","measurement_accuracy","Measurement Accuracy","measurement_accuracy","","http://rs.tdwg.org/dwc/terms/measurementAccuracy"
"verbatimBasisOfRecord","raw_basis_of_record","verbatimBasisOfRecord","raw_basis_of_record","Basis Of Record - original","raw_basis_of_record","Basis Of Record - original","The basis of record as supplied by the data publisher http://rs.tdwg.org/dwc/terms/verbatimBasisOfRecord"
"measurement_method","measurement_method","measurementMethod","measurement_method","Measurement Method","measurement_method","","http://rs.tdwg.org/dwc/terms/measurementMethod"
"relationshipOfResource","relationship_of_resource","relationshipOfResource","relationship_of_resource","Relationship Of Resource","relationship_of_resource","","http://rs.tdwg.org/dwc/terms/relationshipOfResource"
"measurementType","measurement_type","measurementType","measurement_type","Measurement Type","measurement_type","","http://rs.tdwg.org/dwc/terms/measurementType"
"measurementUnit","measurement_unit","measurementUnit","measurement_unit","Measurement Unit","measurement_unit","","http://rs.tdwg.org/dwc/terms/measurementUnit"
"measurement_remarks","measurement_remarks","measurementRemarks","measurement_remarks","Measurement Remarks","measurement_remarks","","http://rs.tdwg.org/dwc/terms/measurementRemarks"
"Precipitation - seasonality (Bio15)","el882","","el882","Precipitation - seasonality (Bio15)","el882","Precipitation - seasonality (Bio15)","https://sampling.ala.org.au/sampling-service/layers/view/more/el882"
"Precipitation - driest quarter  (Bio17)","el889","","el889","Precipitation - driest quarter  (Bio17)","el889","Precipitation - driest quarter  (Bio17)","https://sampling.ala.org.au/sampling-service/layers/view/more/el889"
"Radiation - seasonality (Bio23)","el887","","el887","Radiation - seasonality (Bio23)","el887","Radiation - seasonality (Bio23)","https://sampling.ala.org.au/sampling-service/layers/view/more/el887"
"Radiation - warmest quarter  (Bio26)","el894","","el894","Radiation - warmest quarter  (Bio26)","el894","Radiation - warmest quarter  (Bio26)","https://sampling.ala.org.au/sampling-service/layers/view/more/el894"
"Moisture Index - highest quarter mean (Bio32)","el865","","el865","Moisture Index - highest quarter mean (Bio32)","el865","Moisture Index - highest quarter mean (Bio32)","https://sampling.ala.org.au/sampling-service/layers/view/more/el865"


ucsc,ncbi,date,organism,ensembldb
araTha1,TAIR10,2011-02,Arabidopsis thaliana,FALSE
canFam3,CanFam3.1,2011-09,Canis familiaris,TRUE
ce10,WS220,2010-10,Caenorhabditis elegans,FALSE
ce11,WBcel235,2013-02,Caenorhabditis elegans,TRUE
danRer10,GRCz10,2014-09,Danio rerio,TRUE
danRer11,GRCz11,2017-05,Danio rerio,TRUE
dm3,BDGP5,2006-04,Drosophila melanogaster,FALSE
dm6,BDGP6,2014-08,Drosophila melanogaster,TRUE
galGal4,Galgal4,2011-11,Gallus gallus,FALSE
galGal5,Gallus_gallus-5.0,2015-12,Gallus gallus,TRUE
galGal6,GRCg6a,2018-03,Gallus gallus,FALSE
hg19,GRCh37,2009-02,Homo sapiens,TRUE
hg38,GRCh38,2013-12,Homo sapiens,TRUE
hg38-noalt,GRCh38,2013-12,Homo sapiens,TRUE
mm9,GRCm37,2007-07,Mus musculus,FALSE
mm10,GRCm38,2011-12,Mus musculus,TRUE
rn5,Rnor_5.0,2012-03,Rattus norvegicus,FALSE
rn6,Rnor_6.0,2014-07,Rattus norvegicus,TRUE
sacCer3,R64-1-1,2011-04,Saccharomyces cerevisiae,TRUE
susScr11,Sscrofa11.1,2017-02,Sus scrofa,TRUE
xenTro2,JGI_4.1,2005-08,Xenopus tropicalis,FALSE
xenTro3,JGI_4.2,2009-11,Xenopus tropicalis,TRUE


,index2,feature(1-50),frequency(1-50),feature(51-100),frequency(51-100),feature(101-150),frequency(101-150),feature(151-200),frequency(151-200),feature(201-250),frequency(201-250),feature(251-300),frequency(251-300),feature(301-350),frequency(301-350),feature(351-400),frequency(351-400),feature(401-450),frequency(401-450),feature(451-500),frequency(451-500),feature(501-550),frequency(501-550),feature(551-600),frequency(551-600),feature(551-616),frequency(551-616)
0,0,Building,2033,Spring,117,Asphalt,34,Plant community,15,Net,8,Pole,5,University,4,Nonbuilding structure,2,Megalith,2,Ford motor company,1,Full-size car,1,Customer,1,Aquatic plant,1
1,1,Architecture,1922,Waterway,114,Prairie,33,Player,15,Agriculture,8,Industry,5,Herd,4,Countertop,2,Sports training,2,California-style pizza,1,Automotive tire,1,Organism,1,Musician,1
2,2,Landmark,1249,Tower,113,Farm,32,Hill,15,Outdoor play equipment,8,Parking lot,5,First-class cricket,4,Railway,2,State park,2,Exercise,1,Calm,1,"Ducks, geese and swans",1,Musical ensemble,1
3,3,Sky,1003,Pasture,110,Arch,31,Grazing,14,Turret,8,Supermarket,5,Convent,4,Subcompact car,2,Road trip,2,Number,1,Dish,1,Basketball moves,1,Pizza,1
4,4,Estate,991,Road,109,Monument,30,Ecoregion,14,Sculpture,8,Font,5,Deck,3,Shopping,2,Hill station,2,Weights,1,Electrical supply,1,Violet family,1,Black,1
5,5,House,846,Body of water,103,Morning,30,Column,14,Company,7,Tidal marsh,5,Dairy cow,3,Coffeehouse,2,Village,2,Road bicycle,1,Waterfowl,1,Clay pigeon shooting,1,Pizza cheese,1
6,6,Property,826,Rural area,102,Suburb,30,Fence,14,Headquarters,7,Sunlight,5,Bog,3,Sheep,2,Boulder,2,Palm tree,1,Steel,1,Cricket,1,Outdoor bench,1
7,7,Tree,821,Castle,94,Campus,30,Memorial,14,Street light,7,Convenience store,5,Inflatable,3,Skatepark,2,Duck,2,Dog agility,1,Play,1,Clock,1,Window film,1
8,8,Mansion,722,Street,93,Leisure,30,Signage,13,Business,7,Light,5,Mammal,3,Kiosk,2,Groundcover,2,Market,1,Red,1,Vault,1,Mountain bike,1
9,9,Palace,680,Spire,87,Aerial photography,29,Brickwork,13,Abbey,7,Siding,5,Bazaar,3,Project,2,Car dealership,2,Resort,1,Monastery,1,Mast,1,Bookselling,1
10,10,City,641,Plaza,87,Lake,29,Bovine,13,Ball game,7,Bench,5,Water transportation,3,Cycling,2,Twig,2,Tennis,1,Forest,1,Sporting Group,1,Classic,1
11,11,Facade,618,Roof,84,Photography,29,Bicycle,13,Door,7,Shore,5,Blossom,3,Cherry blossom,2,Weight training,2,Crocus,1,Classic car,1,Wheel,1,Rye,1
12,12,Stately home,544,Gothic architecture,83,Urban design,28,Cobblestone,13,Art,7,Baptistery,5,Hall,3,Airport,2,Rain,2,Laminate flooring,1,Flatbread,1,Crane,1,Riparian forest,1
13,13,Classical architecture,512,Pond,82,Thoroughfare,28,Soil,13,Gasoline,7,Dome,5,Clock tower,3,Food,2,Sidewalk,2,Tundra,1,Screen door,1,Scaffolding,1,Outdoor furniture,1
14,14,Grass,493,Presidential palace,81,Stream,26,Sports,12,Lighting,7,Wildlife,5,Temple,3,Circle,2,Engineering,2,Working animal,1,Thermokarst,1,Bayou,1,Annual plant,1
15,15,Town,486,Watercourse,80,Wetland,26,Interior design,12,Shade,7,Guard rail,5,Motor vehicle,3,Hotel,2,Skyscraper,2,Train station,1,Ranch,1,Home fencing,1,Ceremony,1
16,16,Medieval architecture,461,Town square,79,Parish,26,Highland,12,Steppe,7,Marketplace,5,Football,3,Cow-goat family,2,Barn,2,Luxury vehicle,1,Arcade,1,Loft,1,,
17,17,Natural landscape,394,Mixed-use,77,Snow,26,Mode of transport,12,Filling station,7,Straw,5,Shack,3,Wildflower,2,Ancient history,2,Yurt,1,Basketball hoop,1,Brassica rapa,1,,
18,18,Ch?teau,367,Vehicle,76,Bird's-eye view,26,Corporate headquarters,12,Bridge,7,Stream bed,5,Walking,3,Adaptation,2,Technology,2,Cyclo-cross bicycle,1,Kettlebell,1,Home door,1,,
19,19,Church,363,Green,76,Marsh,26,Pedestrian,12,Tower block,7,Aisle,5,Alley,3,Grove,2,Petroleum,2,Automotive wheel system,1,Brutalist architecture,1,Traffic,1,,
20,20,Official residence,338,Landscape,75,Downtown,23,Competition event,12,Dock,7,Light fixture,5,Grocery store,3,Beach,2,Environmental art,2,Goat,1,Off-roading,1,Public transport,1,,
21,21,Water,310,Tourism,73,Almshouse,23,Rock,12,Sea,7,Boardwalk,5,Mid-size car,3,Coastal and oceanic landforms,2,Bell tower,1,Graffiti,1,Basketball,1,Picket fence,1,,
22,22,Place of worship,305,Plain,71,Biome,23,Evening,12,Leisure centre,6,Holy places,5,Awning,3,Golf course,2,Flowering plant,1,Streetball,1,Wood flooring,1,Wall clock,1,,
23,23,Cathedral,249,Field,71,College,23,Flooring,12,Physical fitness,6,Race track,5,Boutique,3,Thatching,2,Electronic signage,1,Snapshot,1,Hatchback,1,Antique car,1,,
24,24,Natural environment,246,Wall,71,Yard,23,Condominium,11,Machine,6,Travel,5,Monochrome,3,Shopping mall,2,Electrical wiring,1,Caravanserai,1,Afterglow,1,Humpback bridge,1,,
25,25,Human settlement,227,Metropolitan area,70,Infrastructure,22,History,11,Summer,6,Shed,5,Metal,3,bounce house,2,Swing,1,Performance,1,Futsal,1,Brand,1,,
26,26,Garden,225,Daytime,68,Reservoir,22,Restaurant,11,Swimming pool,6,Crop,4,Construction,3,White,2,City car,1,Deciduous,1,Hacienda,1,Plant stem,1,,
27,27,Botany,222,Fountain,67,Riparian zone,21,Vacation,10,Cityscape,6,Warehouse,4,Port,3,Channel,2,Passenger car,1,Blizzard,1,Goats,1,Meteorological phenomenon,1,,
28,28,Home,211,Transport,65,Lane,20,Metropolis,10,Floodplain,6,Harbor,4,Compact car,3,Exercise equipment,2,Sand,1,Gazebo,1,Textile,1,Fair,1,,
29,29,Neighbourhood,187,Meadow,63,Walkway,20,Branch,10,Flag,6,Hut,4,Inventory,3,Tent,2,Junction,1,Toy,1,Shooting,1,Racquet sport,1,,
30,30,Public space,186,Reflection,60,Horizon,20,Gas,10,Shrubland,6,Rapeseed,4,Advertising,3,Community centre,2,Treadmill,1,Kitchen,1,Vehicle door,1,Cemetery,1,,
31,31,Urban area,186,Historic house,57,Freshwater marsh,20,Farmhouse,10,Villa,6,Baseball field,4,Watercraft,3,Bus stop,2,Tulip,1,Tradition,1,Shelf,1,Closet,1,,
32,32,Residential area,175,Sport venue,55,Chapel,20,Yellow,10,Salt marsh,6,Rest area,4,Track,3,Community,2,Grain,1,Fog,1,Swimming,1,Maze,1,,
33,33,Real estate,174,Water feature,49,Atmospheric phenomenon,20,Fish pond,10,Hay,6,Bird,4,Hedge,3,Material property,2,Stone carving,1,Stock photography,1,Composite material,1,Snout,1,,
34,34,Nature,171,Tourist attraction,48,Canal,19,Playground,10,Factory,6,Ruins,4,Creek,3,Swan,2,Auto part,1,Bicycle wheel,1,Barley,1,Caf?,1,,
35,35,Manor house,170,Flower,47,Freezing,18,Trail,10,Product,6,Soccer,4,Mustard,3,Fell,2,Jungle,1,Tunnel,1,Map,1,Tennis Equipment,1,,
36,36,Land lot,166,Leaf,47,Apartment,18,Floor,10,Games,6,Sports equipment,4,Family car,3,Train,2,Labyrinth,1,Trunk,1,Workshop,1,Air travel,1,,
37,37,Plant,158,Shrub,46,Seat of local government,18,Byzantine architecture,9,Coast,6,Courtyard,4,Water bird,3,Paddy field,2,Antique,1,Dog sports,1,Exercise machine,1,Obelisk,1,,
38,38,Grassland,156,Grass family,46,Stadium,18,Furniture,9,Soccer-specific stadium,6,Sunset,4,Basketball court,3,Fisheye lens,2,Pier,1,Weightlifting machine,1,Handrail,1,Concrete bridge,1,,
39,39,Cloud,154,Courthouse,44,Team sport,18,Line,9,Frost,6,Hardwood,4,Arena,3,Trade,2,Shot tower,1,Shooting sport,1,Ingredient,1,Arecales,1,,
40,40,Bank,151,Reflecting pool,43,Road surface,17,National historic landmark,9,Event,6,Crowd,4,Canola,3,Concrete,2,Running,1,Highway,1,Artificial turf,1,Ship,1,,
41,41,Water resources,148,Winter,41,Fortification,17,Atmosphere,9,Fuel,6,Arroyo,4,Slope,3,Land vehicle,2,Levee,1,Strength training,1,Animal sports,1,Logo,1,,
42,42,Historic site,133,Wilderness,41,Fen,17,Team,9,Goal,6,Ditch,4,Dusk,3,Baseball park,2,Harvest,1,Diner,1,Air sports,1,Reinforced concrete,1,,
43,43,Nature reserve,132,Cottage,39,Autumn,16,Fun,8,Iron,6,Marina,4,Ancient roman architecture,3,Canopy,2,Cabinetry,1,Mass production,1,Cuisine,1,Outhouse,1,,
44,44,Vegetation,130,Brick,38,Room,16,Outlet store,8,Table,6,Listed building,4,Mustard plant,3,Driveway,2,Classical sculpture,1,Toyota prius,1,Italian food,1,Winter storm,1,,
45,45,Steeple,128,Commercial building,37,Window,16,Dirt road,8,Panorama,6,Black-and-white,4,Boat,3,Rolling stock,2,Skeet shooting,1,Golf club,1,Tournament,1,Tall ship,1,,
46,46,Botanical garden,126,Landscaping,36,Geological phenomenon,16,Ceiling,8,Glass,6,Fast food,4,Freeway,3,Loch,2,Intersection,1,Tire,1,Ocean,1,Toolroom,1,,
47,47,River,121,Car,36,Retail,15,Observation tower,8,Basilica,6,Gym,4,Log cabin,3,Parking,2,Woodland,1,Polder,1,Boating,1,Vintage car,1,,
48,48,Park,121,Woody plant,35,Statue,15,Night,8,Wood,5,Fast food restaurant,4,Backyard,3,Path,2,Mountainous landforms,1,water lily,1,Barware,1,Water castle,1,,
49,49,Lawn,118,Recreation,34,Mountain,15,Cumulus,8,Livestock,5,Blue,4,Tennis court,3,Championship,2,Playground slide,1,Musical instrument,1,Music,1,Bar,1,,


IRI,label,displayOrder,variable,dataFile,definition,category,parentLabel,parentIRI,codebookDescription,codebookValues,termType,replaces
http://purl.obolibrary.org/obo/PCO_0000024,Household,,,,,Household,,http://www.w3.org/2002/07/owl#Thing,,,,
http://purl.obolibrary.org/obo/ENVO_00000004,Country,,country_code,score_sm_cohort_ken_tan_march3_2020,,Household,Geographic location,http://purl.obolibrary.org/obo/GAZ_00000448,Country code,,variable,
http://purl.obolibrary.org/obo/GAZ_00000448,Geographic location,,,,,Household,Household,http://purl.obolibrary.org/obo/PCO_0000024,,,,
http://purl.obolibrary.org/obo/EUPATH_0020097,Household administrative information,,,,,Household,Household,http://purl.obolibrary.org/obo/PCO_0000024,,,category,
http://purl.obolibrary.org/obo/EUPATH_0044175,Village study arm,,study_arm,score_sm_cohort_ken_tan_march3_2020,,Household,Household administrative information,http://purl.obolibrary.org/obo/EUPATH_0020097,Study arm,,variable,
http://purl.obolibrary.org/obo/EUPATH_0000738,Observation,,,,,Observation,,http://www.w3.org/2002/07/owl#Thing,,,,
http://purl.obolibrary.org/obo/EUPATH_0010075,Height (cm),,hght,score_sm_cohort_ken_tan_march3_2020,Height,Observation,Anthropometry,http://purl.obolibrary.org/obo/EUPATH_0000649,Height measured using standardized technique (stadiometer),,variable,
http://purl.obolibrary.org/obo/EUPATH_0000732,Weight (kg),,wght,score_sm_cohort_ken_tan_march3_2020,,Observation,Anthropometry,http://purl.obolibrary.org/obo/EUPATH_0000649,Weight measured using standardized technique (calibrated scale),,variable,
http://purl.obolibrary.org/obo/EUPATH_0000090,Malaria diagnosis,3,malaria,score_sm_cohort_ken_tan_march3_2020,,Observation,Diagnosis,http://purl.obolibrary.org/obo/OGMS_0000073,Malaria blood smear test,,variable,
http://purl.obolibrary.org/obo/EUPATH_0000649,Anthropometry,,,,,Observation,Observation,http://purl.obolibrary.org/obo/EUPATH_0000738,,,,
http://purl.obolibrary.org/obo/OGMS_0000073,Diagnosis,,,,,Observation,Observation,http://purl.obolibrary.org/obo/EUPATH_0000738,,,,
http://purl.obolibrary.org/obo/EUPATH_0000310,Observation details,,,,,Observation,Observation,http://purl.obolibrary.org/obo/EUPATH_0000738,,,,
http://purl.obolibrary.org/obo/OBI_0001508,Study timepoint,1,study_year,score_sm_cohort_ken_tan_march3_2020,"5 year study with observations at year 1, 3 & 5.",Observation,Observation,http://purl.obolibrary.org/obo/EUPATH_0000738,Study year,,variable,
http://purl.obolibrary.org/obo/OBI_0001169,Age,2,age,score_sm_cohort_ken_tan_march3_2020,Age in years,Observation,Observation details,http://purl.obolibrary.org/obo/EUPATH_0000310,Age of study participant,,variable,
http://purl.obolibrary.org/obo/EUPATH_0000096,Participant,,,,,Participant,,http://www.w3.org/2002/07/owl#Thing,,,,
http://purl.obolibrary.org/obo/PATO_0000047,Sex,,sex,score_sm_cohort_ken_tan_march3_2020,Gender,Participant,Demographics,http://purl.obolibrary.org/obo/EUPATH_0010981,Sex of study participant,,variable,
http://purl.obolibrary.org/obo/EUPATH_0010035,Administrative information,,,,,Participant,Participant,http://purl.obolibrary.org/obo/EUPATH_0000096,,,,
http://purl.obolibrary.org/obo/EUPATH_0010981,Demographics,,,,,Participant,Participant,http://purl.obolibrary.org/obo/EUPATH_0000096,,,,
http://purl.obolibrary.org/obo/EUPATH_0000609,Sample,,,,,Sample,,http://www.w3.org/2002/07/owl#Thing,,,,
http://purl.obolibrary.org/obo/EUPATH_0030115,Eukaryote in stool detection aggregate data,,,,,Sample,Aggregate organism in stool detection data,http://purl.obolibrary.org/obo/EUPATH_0030114,,,,
http://purl.obolibrary.org/obo/EUPATH_0030030,"Any Hookworm, by microscopy",,hook_binary,score_sm_cohort_ken_tan_march3_2020,,Sample,Ancylostomatoidea in stool aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030027,Hookworm infection: Presence or Absence,,variable,
http://purl.obolibrary.org/obo/EUPATH_0030031,"Any Ascaris lumbricoides, by microscopy",,asc_binary,score_sm_cohort_ken_tan_march3_2020,Presence or absence of ascaris eggs,Sample,Ascaris in stool aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030028,Ascaris infection: Presence or Absence,,variable,
http://purl.obolibrary.org/obo/EUPATH_0000047,Hemoglobin (g/dL),,hgb,score_sm_cohort_ken_tan_march3_2020,,Sample,Blood test,http://purl.obolibrary.org/obo/EUPATH_0011795,Hemoglobin measured using capillary blood,,variable,
http://purl.obolibrary.org/obo/EUPATH_0030027,Ancylostomatoidea in stool aggregate data,,,,,Sample,Eukaryote in stool detection aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030115,,,,
http://purl.obolibrary.org/obo/EUPATH_0030028,Ascaris in stool aggregate data,,,,,Sample,Eukaryote in stool detection aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030115,,,,
http://purl.obolibrary.org/obo/EUPATH_0030116,Schistosoma in stool aggregate data,,,,,Sample,Eukaryote in stool detection aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030115,,,,
http://purl.obolibrary.org/obo/EUPATH_0030029,Trichuris in stool aggregate data,,,,,Sample,Eukaryote in stool detection aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030115,,,,
http://purl.obolibrary.org/obo/EUPATH_0011795,Blood test,,,,,Sample,Laboratory test,http://purl.obolibrary.org/obo/OGMS_0000056,,,,
http://purl.obolibrary.org/obo/EUPATH_0000724,Stool microbiology test,,,,,Sample,Laboratory test,http://purl.obolibrary.org/obo/OGMS_0000056,,,,
http://purl.obolibrary.org/obo/OGMS_0000056,Laboratory test,,,,,Sample,Sample,http://purl.obolibrary.org/obo/EUPATH_0000609,,,,
http://purl.obolibrary.org/obo/EUPATH_0030023,"Any Schistosoma mansoni, by microscopy",,sm_binary,score_sm_cohort_ken_tan_march3_2020,,Sample,Schistosoma in stool aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030116,S. mansoni infection: Presence or Absence,,variable,
http://purl.obolibrary.org/obo/EUPATH_0030024,"Mean Schistosoma mansoni count eggs per gram, by microscopy",,mean_epg,score_sm_cohort_ken_tan_march3_2020,"Mean Schistosoma mansoni eggs per gram, from all samples for this study participant",Sample,Schistosoma in stool aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030116,"Mean Schistosoma mansoni infection intensity (eggs per gram of stool): arithmetic mean of sm1a_epg, sm1b_epg, sm2a_epg, sm2b_epg, sm3a_epg, sm3b_epg",,variable,
http://purl.obolibrary.org/obo/EUPATH_0030114,Aggregate organism in stool detection data,,,,,Sample,Stool microbiology test,http://purl.obolibrary.org/obo/EUPATH_0000724,,,,
http://purl.obolibrary.org/obo/EUPATH_0030032,"Any Trichuris trichiura, by microscopy",,trich_binary,score_sm_cohort_ken_tan_march3_2020,,Sample,Trichuris in stool aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030029,Trichuris infection: Presence or Absence,,variable,

function,name,type,value,default,restrictions,description,used_,comment_,comparator
MRMFeatureFilter.filter_MRMFeatures,flag_or_filter,string,filter,flag,filter; flag,"Flag or Filter (i.e., remove) Components or transitions that do not pass the QC.",TRUE,,
MRMFeatureFilter.filter_MRMFeatures,report_xic,string,FALSE,FALSE,true; false,Embed an image of the XIC in the QC report.,TRUE,,
MRMFeatureFilter.filter_MRMFeatures,report_tic,string,FALSE,FALSE,true; false,Embed an image of the TIC in the QC report.,TRUE,,
MRMFeatureFilter.filter_MRMFeatures.qc,flag_or_filter,string,flag,flag,filter; flag,"Flag or Filter (i.e., remove) Components or transitions that do not pass the QC.",TRUE,,
MRMFeatureFilter.filter_MRMFeatures.qc,report_xic,string,FALSE,FALSE,true; false,Embed an image of the XIC in the QC report.,TRUE,,
MRMFeatureFilter.filter_MRMFeatures.qc,report_tic,string,FALSE,FALSE,true; false,Embed an image of the TIC in the QC report.,TRUE,,
FIAMS,acquisition_start,float,0,0,0,The start time to use when extracting out the spectra windows from the MSExperiment,TRUE,,
FIAMS,acquisition_end,float,90,30,,The end time to use when extracting out the spectra windows from the MSExperiment,TRUE,,
FIAMS,resolution,float,120000,120000,,The instrument settings: resolution,TRUE,,
FIAMS,max_mz,float,1200,1500,,Maximum mz,TRUE,,
FIAMS,bin_step,float,20,20,,The size of the step to recalculated the bin size used for adding up spectra along the time axis,TRUE,,
PickMS1Features,frame_length,int,11,11,,SavitzkyGolayFilter parameter. The number of subsequent data points used for smoothing,TRUE,,
PickMS1Features,polynomial_order,int,4,4,,SavitzkyGolayFilter parameter. Order or the polynomial that is fitted,TRUE,,
PickMS1Features,sne:window,float,10,10,,SignalToNoiseEstimatorMedianRapid parameter. Signal-to-noise estimation window (in mz),TRUE,,
PickMS1Features,write_convex_hull,boolean,FALSE,FALSE,true; false,Whether to write out all points of all features into the featureXML,TRUE,,
PickMS1Features,compute_peak_shape_metrics,boolean,TRUE,FALSE,true; false,"Calulates various peak shape metrics (e.g., tailing) that can be used for downstream QC/QA.",TRUE,,
PickMS1Features,min_intensity,float,1000,86000,,All features below the minimum intensity will be discarded,TRUE,,
PickMS1Features,baseline_type,string,vertical_division,,,,TRUE,,
PickMS1Features,integration_type,string,trapezoid,,,,TRUE,,
AccurateMassSearchEngine,mass_error_value,float,2,5,,Tolerance allowed for accurate mass search.,TRUE,,
AccurateMassSearchEngine,mass_error_unit,string,ppm,ppm,ppm; Da,Unit of mass error (ppm or Da),TRUE,,
AccurateMassSearchEngine,ionization_mode,string,auto,,positive; negative; auto,"Positive or negative ionization mode? If 'auto' is used, the first feature of the input map must contain the meta-value 'scan_polarity'. If its missing, the tool will exit with error.",TRUE,,
AccurateMassSearchEngine,isotopic_similarity,boolean,FALSE,FALSE,true; false,Computes a similarity score for each hit (only if the feature exhibits at least two isotopic mass traces).,FALSE,,
AccurateMassSearchEngine,db:mapping,list,["C:/Users/dmccloskey/Desktop/20201105_FIA_MS_OrganismTest/CHEMISTRY/iJO1366_mapping.tsv"],["CHEMISTRY/iJO1366_mapping.tsv"],,"Database input file(s), containing four tab-separated columns of identifier, name, SMILES, INCHI.  The identifier should match with mapping file. SMILES and INCHI are reported in the output, but not used otherwise. By default CHEMISTRY/iJO1366_struct.tsv in OpenMS/share is used! If empty, the default will be used.",TRUE,,
AccurateMassSearchEngine,db:struct,list,["C:/Users/dmccloskey/Desktop/20201105_FIA_MS_OrganismTest/CHEMISTRY/iJO1366_struct.tsv"],["CHEMISTRY/iJO1366_struct.tsv"],,"Database input file(s), containing four tab-separated columns of identifier, name, SMILES, INCHI.  The identifier should match with mapping file. SMILES and INCHI are reported in the output, but not used otherwise. By default CHEMISTRY/iJO1366_struct.tsv in OpenMS/share is used! If empty, the default will be used.",TRUE,,
AccurateMassSearchEngine,positive_adducts,string,C:/Users/dmccloskey/Desktop/20201105_FIA_MS_OrganismTest/CHEMISTRY/positive_adducts.tsv,CHEMISTRY/PositiveAdducts.tsv,,This file contains the list of potential positive adducts that will be looked for in the database. Edit the list if you wish to exclude/include adducts. By default CHEMISTRY/PositiveAdducts.tsv in OpenMS/share is used.,TRUE,,
AccurateMassSearchEngine,negative_adducts,string,C:/Users/dmccloskey/Desktop/20201105_FIA_MS_OrganismTest/CHEMISTRY/negative_adducts.tsv,CHEMISTRY/NegativeAdducts.tsv,,This file contains the list of potential negative adducts that will be looked for in the database. Edit the list if you wish to exclude/include adducts. By default CHEMISTRY/NegativeAdducts.tsv in OpenMS/share is used.,TRUE,,
AccurateMassSearchEngine,use_feature_adducts,boolean,FALSE,FALSE,true; false,Whether to filter AMS candidates mismatching available feature adduct annotation.,FALSE,,
AccurateMassSearchEngine,keep_unidentified_masses,boolean,FALSE,FALSE,true; false,Keep features that did not yield any DB hit.,FALSE,,
AccurateMassSearchEngine,mzTab:exportIsotopeIntensities,boolean,FALSE,FALSE,true; false,[featureXML input only] Export column with available isotope trace intensities (opt_global_MTint),FALSE,,
SequenceProcessor,n_thread,int,29,1,,Number of threads to use,TRUE,,
MergeInjections,scan_polarity_merge_rule,string,WeightedMean,,,,TRUE,,
MergeInjections,mass_range_merge_rule,string,Sum,,,,TRUE,,
MergeInjections,dilution_series_merge_rule,string,Max,,,,TRUE,,
MergeInjections,scan_polarity_merge_feature_name,string,peak_apex_int,,,,TRUE,,
MergeInjections,mass_range_merge_feature_name,string,peak_apex_int,,,,TRUE,,
MergeInjections,dilution_series_merge_feature_name,string,peak_apex_int,,,,TRUE,,
MergeInjections,merge_subordinates,boolean,FALSE,TRUE,,,TRUE,,


"Individual_ID..RNAseq.library.BID.","CaseID..RNA.passed.QC..final.","BrainBank","Organism","PMI","pH","BrainWeight","YearAutopsy","Sex","Ethnicity","AgeDeath","Diagnosis","AgeOnset","DurationIllness","CauseDeath","Hemisphere","RIN","LibraryBatch","Group","ReadDepth","RNAdeg","PicardQC_TOTAL_READS","PicardQC_PF_READS_ALIGNED","PicardQC_PF_HQ_ALIGNED_READS","PicardQC_PCT_CHIMERAS","PicardQC_PF_ALIGNED_BASES","PicardQC_CORRECT_STRAND_READS","PicardQC_PCT_CORRECT_STRAND_READS","PicardQC_MEDIAN_CV_COVERAGE","PicardQC_MEDIAN_5PRIME_TO_3PRIME_BIAS","PicardQC_AT_DROPOUT","PicardQC_READ_PAIR_DUPLICATES","PicardQC_READ_PAIR_OPTICAL_DUPLICATES"
"2014-2200","N-18","SMRI ""New""","Homo sapiens",31,6.68,1330,2002,"M","CAUC",48,"BP",25,23,"CARDIAC","Right",7,"11/6/2014","BD",94.93106,0.553023,94931060,94931060,85397976,0.000756,9402531425,29075263,0.987703,0.383688,0.553023,9.281641,6367552,4943118
"2014-2201","N-21","SMRI ""New""","Homo sapiens",78,6.7,1286,2003,"M","CAUC",43,"SCZ",20,23,"SUIC:JUMPED","Right",7.3,"12/31/2014","SCZ",132.96079,0.562799,132960790,132960790,118912558,0.000659,13127685357,38248565,0.986157,0.415328,0.562799,9.99027,9245219,7288260
"2014-2621","N-9","SMRI ""New""","Homo sapiens",36,6.62,1980,1997,"M","CAUC",56,"Control",NA,NA,"CARDIAC","Right",7.8,"12/29/2014","CTL",87.090292,0.544017,87090292,87090292,76366340,0.000896,8496745600,27821135,0.975314,0.411702,0.544017,14.824147,10335088,7943242
"2014-2622","N-10","SMRI ""New""","Homo sapiens",26,6.6,1530,1998,"M","CAUC",53,"SCZ",28,25,"SUIC:JUMPED","Right",8.1,"12/29/2014","SCZ",85.231866,0.577014,85231866,85231866,76873842,0.000699,8353161814,24175909,0.975001,0.365859,0.577014,10.324155,6371154,5196045
"2014-2624","N-12","SMRI ""New""","Homo sapiens",45,6.473,1360,2002,"F","CAUC",55,"BP",25,30,"SUIC:OD","Right",8.2,"12/29/2014","BD",99.552422,0.664604,99552422,99552422,86865558,0.000822,9705539799,30498697,0.984636,0.364136,0.664604,15.561212,9523027,7983368
"2014-2625","N-13","SMRI ""New""","Homo sapiens",16,6.58,1265,2002,"F","AA",52,"SCZ",30,22,"COPD","Left",8.3,"12/29/2014","SCZ",90.601358,0.622181,90601358,90601358,79820276,0.000902,8869098651,27188853,0.982401,0.368989,0.622181,13.148183,7882191,6713053
"2014-2626","N-14","SMRI ""New""","Homo sapiens",47,6.55,1490,2002,"M","CAUC",49,"Control",NA,NA,"CARDIAC","Right",8.2,"12/29/2014","CTL",89.81813,0.582622,89818130,89818130,80394798,0.000783,8786659501,26646316,0.985048,0.372593,0.582622,10.417277,6656024,5502761
"2014-2627","N-15","SMRI ""New""","Homo sapiens",20,6.72,1505,2002,"M","HiSP",51,"Control",NA,NA,"CARDIAC","Right",8.1,"12/29/2014","CTL",76.868534,0.605641,76868534,76868534,67331400,0.000725,7500142101,22810267,0.984924,0.392624,0.605641,13.031839,6584318,5529648
"2014-2628","N-16","SMRI ""New""","Homo sapiens",44,6.81,1375,2002,"F","CAUC",53,"SCZ",30,23,"CARDIAC","Left",NA,"12/29/2014","SCZ",81.475462,0.586033,81475462,81475462,72213286,0.000797,7979901668,24411299,0.984778,0.394944,0.586033,13.082563,5996410,4916446
"2015-1","N-17","SMRI ""New""","Homo sapiens",NA,NA,1300,2002,"F","CAUC",NA,"SCZ",20,40,"CARDIAC","Left",NA,"12/31/2014","SCZ",90.551108,0.600096,90551108,90551108,79402586,0.000801,8828716603,27371766,0.976527,0.379725,0.600096,14.356329,8210874,6962113
"2015-17","N-1","SMRI ""New""","Homo sapiens",17,6.69,1600,1995,"M","CAUC",48,"Control",NA,NA,"CARDIAC","Left",8.7,"1/5/2015","CTL",83.650758,0.513966,83650758,83650758,74796360,0.000799,8267442413,25319949,0.986782,0.397117,0.513966,10.12378,5556079,4515423
"2015-18","N-2","SMRI ""New""","Homo sapiens",12,6.51,1410,1995,"M","HiSP",48,"Control",NA,NA,"CARDIAC","Right",8.4,"1/5/2015","CTL",79.194294,0.551499,79194294,79194294,70700394,0.000849,7813953975,23247909,0.985509,0.397223,0.551499,11.820383,4975584,4098253
"2015-19","N-3","SMRI ""New""","Homo sapiens",23,6.79,1700,1995,"M","CAUC",34,"Control",NA,NA,"CARDIAC","Right",8.6,"1/5/2015","CTL",86.16832,0.556769,86168320,86168320,76278678,0.000822,8509853628,26907222,0.988051,0.388397,0.556769,10.715171,6541973,5428319
"2015-20","N-4","SMRI ""New""","Homo sapiens",24,6.72,1500,1996,"M","CAUC",56,"Control",NA,NA,"CARDIAC","Right",8,"1/5/2015","CTL",80.92777,0.564925,80927770,80927770,70567290,0.000854,7960092290,25039655,0.988006,0.395544,0.564925,12.958011,6849632,5759339
"2015-21","N-5","SMRI ""New""","Homo sapiens",142,6.63,1320,1996,"M","CAUC",37,"SCZ",20,17,"SUIC:JUMPED","Left",7.7,"1/5/2015","SCZ",76.986616,0.579046,76986616,76986616,68515666,0.000774,7528306229,22221144,0.98678,0.395047,0.579046,9.930877,5184223,4315720
"2015-22","N-6","SMRI ""New""","Homo sapiens",121,6.69,1510,1996,"M","CAUC",46,"SCZ",20,26,"SUIC:OD","Right",6.5,"1/5/2015","SCZ",89.231282,0.6,89231282,89231282,77256802,0.000895,8792523734,28815683,0.986923,0.376082,0.6,17.055443,8804670,7426285
"2015-23","N-7","SMRI ""New""","Homo sapiens",53,6.59,1420,1997,"M","AS",70,"Control",NA,NA,"CARDIAC","Right",8.1,"1/5/2015","CTL",77.489038,0.547983,77489038,77489038,69861992,0.000849,7634109982,22890182,0.98583,0.379592,0.547983,8.819086,5159661,4229606
"2015-24","N-8","SMRI ""New""","Homo sapiens",41,6.36,1370,1997,"M","AS",55,"Control",NA,NA,"CARDIAC","Right",7.9,"1/5/2015","CTL",81.331062,0.537256,81331062,81331062,72585684,0.000815,8022780758,23657991,0.986789,0.395356,0.537256,10.003122,5399966,4475868
"2015-2572","AC-38","SMRI ""Array""","Homo sapiens",47,6.8,1460,1998,"M","CAUC",60,"Control",NA,NA,"CARDIAC","Right",7.3,"9/10/2015","CTL",72.735812,0.556449,72735812,72735812,65193736,0.000722,7192153878,20595736,0.981865,0.420639,0.556449,14.453849,5970698,5120039
"2015-2573","AC-42","SMRI ""Array""","Homo sapiens",16,6.1,1340,1999,"M","CAUC",64,"BP",19,45,"PNEUMONIA","Right",7.9,"9/10/2015","BD",73.49278,0.512758,73492780,73492780,66601096,0.000656,7282361291,18857878,0.97981,0.417865,0.512758,12.03507,4897630,4186652
"2015-2574","AC-44","SMRI ""Array""","Homo sapiens",36,6.8,1340,1999,"F","CAUC",32,"SCZ",29,3,"SUIC:JUMPED","Left",8.5,"9/10/2015","SCZ",39.02249,0.34871,39022490,39022490,35917854,0.000578,3861196760,10859357,0.978919,0.575606,0.34871,9.186062,3019784,2341717
"2015-2575","AC-47","SMRI ""Array""","Homo sapiens",32,6.67,1560,1999,"M","CAUC",44,"SCZ",9,35,"CARDIAC","Left",7.3,"9/10/2015","SCZ",57.963008,0.589477,57963008,57963008,51139724,0.000653,5687306610,15313981,0.981036,0.464387,0.589477,20.89511,7215682,6565064
"2015-2576","AC-49","SMRI ""Array""","Homo sapiens",22,6.48,1480,1999,"M","CAUC",34,"Control",NA,NA,"CARDIAC","Right",7.9,"9/10/2015","CTL",49.353156,0.580784,49353156,49353156,44066228,0.000684,4875184459,13935610,0.982155,0.469986,0.580784,18.178092,5062441,4515973
"2015-2577","AC-58","SMRI ""Array""","Homo sapiens",32,6.97,1290,2000,"F","CAUC",63,"BP",43,20,"CARDIAC","Left",8.9,"9/10/2015","BD",65.218444,0.632738,65218444,65218444,57608564,0.000853,6446215736,20207642,0.979008,0.487975,0.632738,19.657648,7157749,6157934
"2015-2578","AC-100","SMRI ""Array""","Homo sapiens",38,6.93,1515,2002,"F","CAUC",59,"SCZ",14,45,"CARDIAC","Right",7.6,"9/10/2015","SCZ",62.588506,0.654114,62588506,62588506,55538208,0.000756,6183907461,17851234,0.982882,0.449722,0.654114,18.79371,6211926,5524301
"2015-2579","AC-65","SMRI ""Array""","Homo sapiens",23,6.93,1390,2000,"M","CAUC",49,"Control",NA,NA,"CARDIAC","Left",8.6,"9/10/2015","CTL",43.902558,0.509342,43902558,43902558,39651276,0.000683,4347009877,13019695,0.980328,0.537931,0.509342,19.624052,4692087,4069778
"2015-2580","AC-66","SMRI ""Array""","Homo sapiens",35,6.66,1390,2000,"M","CAUC",45,"SCZ",15,30,"CARDIAC","Left",8.4,"9/14/2015","SCZ",39.819038,0.486266,39819038,39819038,36232710,0.000672,3956206614,11265432,0.983482,0.506055,0.486266,13.835786,3158702,2600905
"2015-2581","AC-67","SMRI ""Array""","Homo sapiens",24,7.03,1415,2000,"M","CAUC",35,"Control",NA,NA,"CARDIAC","Left",8.6,"9/14/2015","CTL",41.662236,0.4986,41662236,41662236,37425182,0.000825,4118835736,12910439,0.9862,0.51253,0.4986,18.286834,4401895,3933640
"2015-2582","AC-70","SMRI ""Array""","Homo sapiens",31,6.7,1515,2000,"M","CAUC",55,"Control",NA,NA,"CARDIAC","Left",7.7,"9/14/2015","CTL",55.926934,0.486254,55926934,55926934,50182380,0.000784,5546223128,16568304,0.98572,0.458569,0.486254,15.271577,5528510,4757084
"2015-2583","AC-72","SMRI ""Array""","Homo sapiens",38,6.39,1190,2000,"F","CAUC",49,"BP",20,29,"OD","Right",6.9,"9/14/2015","BD",41.106946,0.469966,41106946,41106946,37771450,0.000641,4068094723,11093983,0.981788,0.45398,0.469966,8.859602,2761815,2369871
"2015-2584","AC-74","SMRI ""Array""","Homo sapiens",24,6.51,1450,2000,"F","CAUC",33,"BP",15,18,"SUIC:HANGING","Left",8.2,"9/14/2015","BD",49.818308,0.506553,49818308,49818308,44664626,0.000749,4927161240,14816089,0.985268,0.493615,0.506553,16.00603,4555775,3926558
"2015-2585","AC-75","SMRI ""Array""","Homo sapiens",42,6.65,1170,2000,"F","CAUC",54,"SCZ",17,37,"PNEUMONIA","Right",8.5,"9/14/2015","SCZ",39.403664,0.446528,39403664,39403664,36399448,0.00068,3912320116,10859147,0.98439,0.525933,0.446528,10.484764,2614187,2033924
"2015-2586","AC-82","SMRI ""Array""","Homo sapiens",26,6.8,1470,2001,"M","CAUC",39,"SCZ",34,5,"SUIC:HANGING","Right",8.1,"9/14/2015","SCZ",105.610496,0.697496,105610496,105610496,91613628,0.000861,10423192130,32968810,0.984735,0.474277,0.697496,22.019751,13492436,12020805
"2015-2587","AC-83","SMRI ""Array""","Homo sapiens",13,6.57,1410,2001,"M","CAUC",32,"Control",NA,NA,"CARDIAC","Right",8.6,"9/14/2015","CTL",50.719062,0.513081,50719062,50719062,46222172,0.000741,5033938873,15102424,0.985313,0.501862,0.513081,13.909067,3905458,3309732
"2015-2588","AC-84","SMRI ""Array""","Homo sapiens",11,6.6,1495,2001,"M","CAUC",47,"Control",NA,NA,"CARDIAC","Left",9,"9/16/2015","CTL",61.073236,0.514853,61073236,61073236,55102110,0.000759,6063903705,18694062,0.987593,0.514743,0.514853,16.454639,6029491,5296114
"2015-2589","AC-87","SMRI ""Array""","Homo sapiens",54,6.18,1629,2001,"M","CAUC",41,"SCZ",20,21,"CARDIAC","Left",8.3,"9/16/2015","SCZ",47.796686,0.501286,47796686,47796686,43573958,0.000631,4726088098,12651901,0.983026,0.488779,0.501286,13.14058,3735320,3222334
"2015-2590","AC-88","SMRI ""Array""","Homo sapiens",65,6.67,1490,2001,"M","CAUC",43,"SCZ",25,18,"SUIC:HANGING","Right",8.4,"9/16/2015","SCZ",63.959442,0.51032,63959442,63959442,58015496,0.000663,6319164576,18499464,0.979795,0.511157,0.51032,15.853199,6377671,5363334
"2015-2591","AC-91","SMRI ""Array""","Homo sapiens",22,6.71,1900,2001,"M","CAUC",51,"Control",NA,NA,"CARDIAC","Left",8.7,"9/16/2015","CTL",54.553752,0.625519,54553752,54553752,48246798,0.000827,5400055427,16830464,0.985928,0.476119,0.625519,20.023201,6006121,5391445
"2015-2592","AC-92","SMRI ""Array""","Homo sapiens",26,6.19,1410,2001,"M","CAUC",42,"SCZ",24,18,"SUIC:JUMPED","Right",7.5,"9/16/2015","SCZ",55.260236,0.564782,55260236,55260236,50148060,0.000625,5460460095,15551337,0.982926,0.458073,0.564782,12.435333,4556275,3922132
"2015-2593","AC-96","SMRI ""Array""","Homo sapiens",24,6.91,1321,2002,"M","CAUC",48,"Control",NA,NA,"CARDIAC","Right",8.2,"9/16/2015","CTL",67.874126,0.583667,67874126,67874126,60135940,0.000685,6675357855,18909016,0.979239,0.492136,0.583667,20.512235,8219351,7319487
"2015-2594","AC-97","SMRI ""Array""","Homo sapiens",30,6.72,1630,2002,"M","CAUC",46,"SCZ",22,24,"PNEUMONIA","Left",6.6,"9/16/2015","SCZ",71.131222,0.530625,71131222,71131222,64103304,0.000761,7008122477,20528093,0.983188,0.420101,0.530625,13.54729,5950732,5011229
"2015-2595","AC-98","SMRI ""Array""","Homo sapiens",23,6.07,1670,2002,"M","CAUC",56,"BP",28,28,"SUIC:OD","Right",9,"9/16/2015","BD",29.590694,0.396956,29590694,29590694,27429944,0.000669,2927294552,8332259,0.983256,0.585901,0.396956,8.284022,1813191,1446854
"2015-2603","AC-2","SMRI ""Array""","Homo sapiens",60,6.7,1430,1995,"M","CAUC",29,"BP",17,12,"SUIC:CO","Left",8.5,"9/21/2015","BD",44.214026,0.410026,44214026,44214026,40532904,0.000862,4377736846,13263660,0.981073,0.583209,0.410026,17.597797,5086858,4434143
"2015-2604","AC-4","SMRI ""Array""","Homo sapiens",28,6.35,1480,1996,"M","CAUC",45,"BP",35,10,"CARDIAC","Right",8.3,"9/21/2015","BD",65.39616,0.466779,65396160,65396160,59535924,0.000721,6484491159,18129250,0.98501,0.490333,0.466779,14.447484,6201345,5397745
"2015-2605","AC-5","SMRI ""Array""","Homo sapiens",70,6.71,1625,1996,"M","NatAM",41,"BP",22,19,"SUIC:OD","Left",8.3,"9/21/2015","BD",54.037796,0.437556,54037796,54037796,49163086,0.000622,5359394218,14706006,0.984749,0.497443,0.437556,12.429433,4800687,4156187
"2015-2606","AC-7","SMRI ""Array""","Homo sapiens",33,6.2,1480,1996,"M","CAUC",31,"SCZ",22,9,"CARDIAC","Right",7.7,"9/21/2015","SCZ",48.936778,0.450051,48936778,48936778,45610532,0.000651,4866962598,12645747,0.982582,0.443029,0.450051,6.673977,2416325,1799135
"2015-2607","AC-8","SMRI ""Array""","Homo sapiens",19,6.74,1660,1996,"M","CAUC",44,"BP",33,11,"SUIC:HANGING","Right",8.5,"9/21/2015","BD",82.536392,0.444489,82536392,82536392,74642446,0.000654,8160004420,23121393,0.983248,0.574472,0.444489,16.985178,10276591,8806030
"2015-2608","AC-9","SMRI ""Array""","Homo sapiens",52,6.51,1510,1996,"F","CAUC",45,"SCZ",34,11,"SUIC:JUMPED","Right",8.6,"9/21/2015","SCZ",63.065204,0.477866,63065204,63065204,57838294,0.000778,6274508941,19121596,0.984788,0.493376,0.477866,15.787456,6542996,5804805
"2015-2609","AC-10","SMRI ""Array""","Homo sapiens",34,6.18,1480,1996,"M","CAUC",40,"SCZ",21,19,"PNEUMONIA","Right",8.6,"9/21/2015","SCZ",87.27171,0.596769,87271710,87271710,77830846,0.000695,8613331494,23809228,0.979989,0.507174,0.596769,18.748665,10318400,9431915
"2015-2610","AC-12","SMRI ""Array""","Homo sapiens",28,6.73,1465,1997,"M","CAUC",19,"SCZ",18,1,"OD","Left",8.7,"9/21/2015","SCZ",40.34462,0.425968,40344620,40344620,36469932,0.000652,3988148235,11617118,0.982748,0.558109,0.425968,15.268671,4201838,3792218
"2015-2623","AC-14","SMRI ""Array""","Homo sapiens",18,6.5,1205,1997,"F","CAUC",48,"BP",33,15,"CARDIAC","Left",8.7,"9/23/2015","BD",67.031598,0.427927,67031598,67031598,62490228,0.000577,6649695034,18368843,0.974718,0.506532,0.427927,4.270183,3565197,2952328
"2015-2625","AC-22","SMRI ""Array""","Homo sapiens",30,6.8,1550,1997,"M","CAUC",37,"SCZ",13,24,"CARDIAC","Right",8.8,"9/23/2015","SCZ",72.57287,0.748903,72572870,72572870,64719812,0.000868,7201690380,21549703,0.98062,0.511133,0.748903,17.382679,7540424,6725268
"2015-2626","AC-23","SMRI ""Array""","Homo sapiens",17,6.1,1250,1997,"F","CAUC",35,"BP",21,14,"SUIC:CO","Right",8.1,"9/23/2015","BD",39.149188,0.429776,39149188,39149188,36648446,0.000642,3887555784,10451401,0.982043,0.529164,0.429776,3.436955,2131470,1639898
"2015-2627","AC-25","SMRI ""Array""","Homo sapiens",10,6.1,1450,1998,"M","CAUC",52,"SCZ",28,24,"CARDIAC","Right",6.2,"9/23/2015","SCZ",43.457568,0.518786,43457568,43457568,40462962,0.000661,4331564746,11596247,0.980992,0.478967,0.518786,3.488891,1907042,1454159
"2015-2628","AC-26","SMRI ""Array""","Homo sapiens",15,6.2,1505,1998,"M","CAUC",24,"SCZ",20,4,"SUIC:OD","Right",8.6,"9/23/2015","SCZ",51.376954,0.585728,51376954,51376954,47411560,8e-04,5110208154,14972330,0.982983,0.493672,0.585728,7.162256,3448627,2944740
"2015-2629","AC-30","SMRI ""Array""","Homo sapiens",28,6,1340,1998,"M","CAUC",53,"Control",NA,NA,"CARDIAC","Left",8.1,"9/23/2015","CTL",80.377326,0.68895,80377326,80377326,73227320,0.000843,7978408468,23153002,0.980364,0.489615,0.68895,11.937051,6034879,5166882
"2015-2630","AC-31","SMRI ""Array""","Homo sapiens",9,5.9,1415,1998,"M","CAUC",44,"SCZ",19,25,"EXHAUSTIVE MANIA/NMS","Left",8,"9/23/2015","SCZ",73.2425,0.684593,73242500,73242500,66614464,0.000791,7265467951,21507167,0.97909,0.469222,0.684593,11.315993,5568839,4787701
"2015-2881","AC-34","SMRI ""Array""","Homo sapiens",35,6.5,1440,1998,"F","CAUC",58,"BP",27,31,"SUIC:GSW","Left",8.8,"10/15/2015","BD",51.86286,0.254055,51862860,51862860,48848906,0.000553,5132104722,13869486,0.980337,0.539547,0.254055,4.80045,2841266,2318249
"2015-2882","AC-35","SMRI ""Array""","Homo sapiens",28,6.7,1350,1998,"F","CAUC",38,"Control",NA,NA,"CARDIAC","Right",8.2,"10/15/2015","CTL",43.558204,0.250368,43558204,43558204,40768462,0.000543,4302939697,12470808,0.980106,0.61146,0.250368,9.895576,3700463,3214741
"2015-2884","AC-37","SMRI ""Array""","Homo sapiens",80,6.6,1355,1998,"M","CAUC",39,"SCZ",17,22,"MVA","Left",8.1,"10/15/2015","SCZ",26.719856,0.262423,26719856,26719856,24701710,0.000532,2623146405,7518482,0.9824,0.629346,0.262423,12.264012,2901575,2502122
"2015-2885","AC-39","SMRI ""Array""","Homo sapiens",29,6.5,1470,1999,"M","CAUC",33,"SCZ",19,14,"CARDIAC","Left",8.1,"10/15/2015","SCZ",43.996284,0.25091,43996284,43996284,41522004,0.000537,4364650909,11564009,0.983365,0.561885,0.25091,4.037859,2317157,1735012
"2015-2886","AC-41","SMRI ""Array""","Homo sapiens",18,6.3,1520,1999,"M","CAUC",43,"SCZ",18,25,"CIRRHOSIS","Right",8.3,"10/15/2015","SCZ",36.41173,0.323191,36411730,36411730,33951924,0.000513,3588940686,9813643,0.983471,0.522266,0.323191,5.78904,2163736,1662530
"2015-2887","AC-43","SMRI ""Array""","Homo sapiens",52,6.7,1700,1999,"M","CAUC",35,"Control",NA,NA,"MYOCARDITIS","Right",7.6,"10/15/2015","CTL",44.976912,0.370212,44976912,44976912,40849136,0.000593,4353661009,12785000,0.978379,0.543059,0.370212,17.800439,5851029,5158981
"2015-2888","AC-45","SMRI ""Array""","Homo sapiens",47,6.4,1370,1999,"M","CAUC",35,"SCZ",14,21,"CARDIAC","Right",7.4,"10/15/2015","SCZ",40.621336,0.269406,40621336,40621336,38383002,0.000556,4007598724,11377843,0.982551,0.56131,0.269406,4.760364,2481217,1773177
"2015-2917","AC-46","SMRI ""Array""","Homo sapiens",84,6.65,1300,1999,"M","CAUC",59,"BP",25,34,"SLEEP APNEA","Right",8,"10/20/2015","BD",65.278716,0.404069,65278716,65278716,60289470,0.000566,6379022530,16894999,0.976893,0.452219,0.404069,8.242922,4584711,3687249
"2015-2918","AC-51","SMRI ""Array""","Homo sapiens",21,6.81,1550,2000,"M","CAUC",47,"Control",NA,NA,"CARDIAC","Left",8,"10/20/2015","CTL",125.618036,0.60881,125618036,125618036,113929270,0.000585,11966733629,33347374,0.954203,0.469256,0.60881,24.94073,23686443,22146736
"2015-2919","AC-52","SMRI ""Array""","Homo sapiens",29,6.94,1405,2000,"M","CAUC",45,"Control",NA,NA,"CARDIAC","Right",8.4,"10/20/2015","CTL",29.188568,0.286112,29188568,29188568,27222006,5e-04,2855643031,7888733,0.97948,0.61641,0.286112,8.355554,2591771,1962684
"2015-2921","AC-54","SMRI ""Array""","Homo sapiens",37,6.91,1340,2000,"M","CAUC",42,"Control",NA,NA,"CARDIAC","Left",7.8,"10/20/2015","CTL",48.03109,0.46726,48031090,48031090,43774082,0.000675,4672096188,13876202,0.976639,0.499605,0.46726,16.785885,5345883,4645656
"2015-2922","AC-55","SMRI ""Array""","Homo sapiens",13,6.3,1310,2000,"M","CAUC",47,"SCZ",20,27,"ACUTE PANCREAT","Left",8.1,"10/20/2015","SCZ",38.55192,0.365916,38551920,38551920,35707820,0.000483,3776066983,10361992,0.979999,0.547359,0.365916,7.46386,2626826,2143487
"2015-2923","AC-56","SMRI ""Array""","Homo sapiens",10,6.2,1305,2000,"F","CAUC",44,"Control",NA,NA,"CARDIAC","Right",7.9,"10/20/2015","CTL",63.145718,0.463268,63145718,63145718,57527788,0.00052,6147209389,16897712,0.983133,0.481255,0.463268,11.910748,5821365,5085777
"2015-2924","AC-57","SMRI ""Array""","Homo sapiens",23,6.67,1590,2000,"M","CAUC",51,"BP",23,28,"CARDIAC","Right",8.1,"10/20/2015","BD",65.578954,0.48247,65578954,65578954,59414952,0.000562,6389272395,18221259,0.982191,0.54667,0.48247,18.16881,8110966,7307012
"2015-2945","AC-61","SMRI ""Array""","Homo sapiens",37,6.37,1200,2000,"F","CAUC",44,"BP",26,18,"MYOCARDITIS","Right",6.4,"10/22/2015","BD",67.750834,0.449823,67750834,67750834,62754006,0.000558,6676219997,17548657,0.978655,0.436657,0.449823,7.682436,4108167,3140405
"2015-2946","AC-62","SMRI ""Array""","Homo sapiens",26,6.58,1170,2000,"F","CAUC",56,"BP",14,42,"DROWNING","Left",7.8,"10/22/2015","BD",63.867966,0.612812,63867966,63867966,58043200,0.000649,6285200098,17707323,0.980861,0.455451,0.612812,14.119737,5391040,4800230
"2015-2947","AC-63","SMRI ""Array""","Homo sapiens",39,6.74,1505,2000,"F","CAUC",43,"BP",25,18,"SUIC:OD","Left",8.4,"10/22/2015","BD",97.116178,0.551471,97116178,97116178,85830196,0.000629,9474889790,27534122,0.983156,0.485579,0.551471,19.434277,11977761,10800122
"2015-2948","AC-64","SMRI ""Array""","Homo sapiens",22,6.58,1390,2000,"M","CAUC",35,"BP",14,21,"DROWNING","Right",8.7,"10/22/2015","BD",51.740908,0.408287,51740908,51740908,46310330,0.000629,5059674031,14562130,0.984574,0.536264,0.408287,16.428833,5890770,5238109
"2015-2949","AC-68","SMRI ""Array""","Homo sapiens",27,6.49,1480,2000,"F","CAUC",36,"SCZ",33,3,"SUIC:HANGING","Left",7.9,"10/22/2015","SCZ",90.566722,0.554566,90566722,90566722,82589036,0.000628,8849677245,24781765,0.980407,0.480028,0.554566,13.224402,8589089,7337406
"2015-2950","AC-69","SMRI ""Array""","Homo sapiens",62,6.51,1400,2000,"F","CAUC",50,"BP",25,25,"SUIC:OD","Left",8,"10/22/2015","BD",129.182748,0.649413,129182748,129182748,112472996,0.000702,12512504659,36879152,0.981718,0.467367,0.649413,22.887677,18563477,16896418
"2015-2951","AC-77","SMRI ""Array""","Homo sapiens",29,6.52,1360,2001,"F","CAUC",33,"Control",NA,NA,"ASTHMA","Left",7.2,"10/22/2015","CTL",156.063492,0.499922,156063492,156063492,140501762,0.000596,15144695653,41554117,0.971246,0.483673,0.499922,16.54918,17656766,15165056
"2015-2952","AC-85","SMRI ""Array""","Homo sapiens",35,6.68,1210,2001,"M","HiSP",38,"SCZ",17,21,"OD","Left",8.5,"10/22/2015","SCZ",64.839814,0.36863,64839814,64839814,60192732,0.000626,6356041979,18150587,0.981318,0.525553,0.36863,9.339341,4904886,4004597
"2015-3","N-19","SMRI ""New""","Homo sapiens",43,6.52,1440,2002,"M","AS",49,"BP",34,15,"SUIC:HANGING","Left",8.3,"12/31/2014","BD",85.46587,0.568747,85465870,85465870,76091858,0.00082,8407177988,25210751,0.983533,0.38064,0.568747,11.149217,6275628,5167594
"2015-3079","AC-86","SMRI ""Array""","Homo sapiens",31,6.67,1360,2001,"M","CAUC",46,"Control",NA,NA,"CARDIAC","Left",7.9,"11/3/2015","CTL",71.75274,0.354725,71752740,71752740,66366624,0.000586,7051133931,19709371,0.982206,0.470381,0.354725,7.099587,4385061,3395150
"2015-3080","AC-89","SMRI ""Array""","Homo sapiens",57,5.92,1340,2001,"F","CAUC",43,"BP",29,14,"OD","Left",7.7,"11/3/2015","BD",87.200344,0.594994,87200344,87200344,79000126,0.000732,8577422986,24479307,0.980787,0.426205,0.594994,14.196187,7280644,6418138
"2015-3081","AC-90","SMRI ""Array""","Homo sapiens",38,6.67,1498,2001,"M","CAUC",40,"Control",NA,NA,"CARDIAC","Left",8.6,"11/3/2015","CTL",73.312276,0.482094,73312276,73312276,65779710,0.000665,7141852809,21034292,0.977566,0.536039,0.482094,17.987001,8946969,7833209
"2015-3082","AC-93","SMRI ""Array""","Homo sapiens",35,6.5,1575,2002,"F","CAUC",47,"SCZ",20,27,"CARDIAC","Left",8.5,"11/3/2015","SCZ",82.025112,0.568079,82025112,82025112,71536032,0.000658,7944571588,24364102,0.980677,0.501047,0.568079,23.606159,12284090,11159905
"2015-3083","AC-95","SMRI ""Array""","Homo sapiens",11,6.13,1335,2002,"M","CAUC",31,"Control",NA,NA,"PULM EMBOL","Right",7.5,"11/3/2015","CTL",70.208226,0.560484,70208226,70208226,64824298,0.000602,6857873833,18969092,0.976459,0.466278,0.560484,14.163177,6974496,6168827
"2015-3084","AC-99","SMRI ""Array""","Homo sapiens",58,6.46,1260,2002,"F","CAUC",39,"Control",NA,NA,"CARDIAC","Right",7.9,"11/3/2015","CTL",54.317634,0.521555,54317634,54317634,49336990,0.000748,5371769084,15914318,0.98285,0.443901,0.521555,12.132872,4336668,3794810
"2015-3085","AC-102","SMRI ""Array""","Homo sapiens",23,6.9,1466,2002,"M","CAUC",48,"BP",31,17,"SUIC:HANGING","Left",7.7,"11/3/2015","BD",46.367268,0.520555,46367268,46367268,41888106,0.000603,4586700933,12560540,0.981764,0.475676,0.520555,15.344538,4231516,3796419
"2015-3086","AC-103","SMRI ""Array""","Homo sapiens",36,6.57,1535,2002,"M","CAUC",47,"Control",NA,NA,"CARDIAC","Left",7.9,"11/3/2015","CTL",44.944146,0.273828,44944146,44944146,41925550,0.000543,4390083304,12333463,0.977933,0.609523,0.273828,6.707433,3791680,2768764
"2015-3164","AC-6","SMRI ""Array""","Homo sapiens",62,6.74,1330,1996,"F","CAUC",29,"BP",18,11,"OD","Left",7.5,"11/16/2015","BD",50.832286,0.352788,50832286,50832286,46957220,0.00065,5049283928,13901559,0.980521,0.440806,0.352788,8.840863,2806292,2260809
"2015-3165","AC-17","SMRI ""Array""","Homo sapiens",13,6.49,1345,1997,"F","CAUC",53,"SCZ",29,24,"CARDIAC","Left",8.2,"11/16/2015","SCZ",48.589108,0.26803,48589108,48589108,45281886,0.000536,4824737502,12840416,0.983081,0.543153,0.26803,6.537895,3871522,3363316
"2015-3166","AC-19","SMRI ""Array""","Homo sapiens",46,6.5,1605,1997,"M","CAUC",49,"Control",NA,NA,"CARDIAC","Right",7.1,"11/16/2015","CTL",38.06382,0.35116,38063820,38063820,35048978,0.000607,3762384545,10298896,0.981525,0.496229,0.35116,9.506952,3359062,2902973
"2015-3167","AC-79","SMRI ""Array""","Homo sapiens",31,6.86,1580,2001,"M","CAUC",48,"Control",NA,NA,"CARDIAC","Right",8.4,"11/16/2015","CTL",67.910468,0.361933,67910468,67910468,61559936,0.000705,6746096988,19397100,0.981924,0.505572,0.361933,9.333019,5352834,4604788
"2015-3168","AC-32","SMRI ""Array""","Homo sapiens",49,6.65,1335,2002,"F","CAUC",42,"BP",20,22,"OD","Left",7.6,"11/16/2015","BD",79.39126,0.481683,79391260,79391260,73003202,0.000645,7863825767,21205093,0.977669,0.457962,0.481683,11.209124,6325766,5389750
"2015-3169","AC-60","SMRI ""Array""","Homo sapiens",18,6.81,1585,2000,"M","CAUC",45,"Control",NA,NA,"CARDIAC","Left",8.3,"11/16/2015","CTL",31.725638,0.31797,31725638,31725638,29152936,0.00054,3133272045,8647092,0.972787,0.622192,0.31797,14.263749,3416403,2947183
"2015-3170","AC-71","SMRI ""Array""","Homo sapiens",45,6.72,1435,2000,"F","CAUC",49,"Control",NA,NA,"CARDIAC","Left",7.7,"11/16/2015","CTL",43.196618,0.459878,43196618,43196618,39035448,0.000765,4275485557,12636277,0.979939,0.515935,0.459878,20.410495,5249641,4780976
"2015-3227","AC-73","SMRI ""Array""","Homo sapiens",38,6.17,1400,2000,"M","CAUC",53,"SCZ",23,30,"CARDIAC","Right",8,"12/3/2015","SCZ",72.796804,0.386777,72796804,72796804,67804774,0.000685,7208652811,20199923,0.983943,0.447705,0.386777,5.58735,3786390,2844925
"2015-3228","AC-76","SMRI ""Array""","Homo sapiens",28,6.44,1360,2001,"F","CAUC",41,"BP",14,27,"CARDIAC","Left",6.5,"12/3/2015","BD",87.877492,0.502338,87877492,87877492,80252690,0.00064,8643600538,23192701,0.98246,0.450689,0.502338,8.370472,6089191,5060770
"2015-3229","AC-40","SMRI ""Array""","Homo sapiens",9,6.2,1400,1999,"M","CAUC",50,"SCZ",31,19,"CARDIAC","Right",7.6,"12/3/2015","SCZ",121.788856,0.475071,121788856,121788856,111495476,0.000668,12063709058,33388075,0.983165,0.424126,0.475071,8.7266,8638021,7042812
"2015-3230","AC-20","SMRI ""Array""","Homo sapiens",53,6.2,1410,1997,"F","CAUC",59,"BP",48,11,"SUIC:OD","Right",8.1,"12/3/2015","BD",45.389068,0.393903,45389068,45389068,41297408,0.000689,4492151150,13165392,0.983012,0.474119,0.393903,8.615616,3348834,2791304
"2015-3231","AC-80","SMRI ""Array""","Homo sapiens",49,6.75,1645,2001,"M","CAUC",50,"Control",NA,NA,"CARDIAC","Right",8.1,"12/3/2015","CTL",102.248116,0.384984,102248116,102248116,92197170,0.000678,10141964815,30579137,0.985745,0.518535,0.384984,14.07962,11516034,10022630
"2015-3232","AC-81","SMRI ""Array""","Homo sapiens",30,6.47,1430,2001,"F","CAUC",47,"SCZ",23,24,"OD","Right",7.4,"12/3/2015","SCZ",77.021248,0.466429,77021248,77021248,70896364,0.000555,7641636568,18819145,0.981112,0.444354,0.466429,7.656886,4682850,3914403
"2015-3233","AC-94","SMRI ""Array""","Homo sapiens",19,6.48,1310,2002,"M","CAUC",42,"SCZ",18,24,"CARDIAC","Right",8.6,"12/3/2015","SCZ",79.025484,0.346129,79025484,79025484,72662918,0.000654,7855153151,22937381,0.98623,0.518255,0.346129,9.309258,6944586,5772884
"2015-3234","AC-1","SMRI ""Array""","Homo sapiens",48,6.39,1570,1994,"M","CAUC",29,"BP",22,7,"SUIC:JUMPED","Left",8.6,"12/3/2015","BD",74.088612,0.304508,74088612,74088612,68226386,0.000645,7362072800,21932350,0.98724,0.575963,0.304508,9.49519,7017542,5810764
"2015-3235","AC-11","SMRI ""Array""","Homo sapiens",43,6.63,1390,1997,"M","CAUC",51,"SCZ",23,28,"CARDIAC","Left",8.2,"12/3/2015","SCZ",77.273638,0.426213,77273638,77273638,69616806,0.000718,7610635318,22001528,0.985822,0.524877,0.426213,17.312314,10154806,8964561
"2015-3236","AC-13","SMRI ""Array""","Homo sapiens",19,5.87,1380,1997,"F","CAUC",49,"BP",22,27,"SUIC:MVA","Right",6.8,"12/3/2015","BD",99.412608,0.49281,99412608,99412608,91641916,0.000551,9821556089,24429589,0.981885,0.470209,0.49281,8.277658,7647480,6148356
"2015-3237","AC-15","SMRI ""Array""","Homo sapiens",28,6.59,1330,1997,"F","CAUC",44,"Control",NA,NA,"CARDIAC","Right",8.8,"12/3/2015","CTL",45.938154,0.387279,45938154,45938154,42168618,0.000664,4559442636,13616017,0.986163,0.552292,0.387279,14.04337,4806491,4051736
"2015-3238","AC-18","SMRI ""Array""","Homo sapiens",35,6.3,1490,1997,"M","CAUC",35,"BP",19,16,"CARDIAC","Left",8.4,"12/3/2015","BD",61.324598,0.421911,61324598,61324598,57186492,0.000722,6075025035,19050071,0.98506,0.562629,0.421911,11.00029,4979153,3984196
"2015-3275","AC-24","SMRI ""Array""","Homo sapiens",9,6.4,1500,1997,"M","CAUC",53,"Control",NA,NA,"CARDIAC","Left",8.1,"12/7/2015","CTL",53.698292,0.320207,53698292,53698292,50192608,0.000593,5346679244,14703214,0.985492,0.496581,0.320207,6.006356,3341505,2656121
"2015-3276","AC-29","SMRI ""Array""","Homo sapiens",31,6.7,1400,1998,"M","CAUC",51,"Control",NA,NA,"CARDIAC","Right",8.7,"12/7/2015","CTL",51.295126,0.280472,51295126,51295126,47318392,0.000632,5093449959,15444050,0.986419,0.592234,0.280472,11.795702,5266733,4332747
"2015-3277","AC-33","SMRI ""Array""","Homo sapiens",33,6,1120,1998,"F","CAUC",38,"Control",NA,NA,"CARDIAC","Right",8.4,"12/7/2015","CTL",43.413556,0.325285,43413556,43413556,40060386,0.000648,4306404009,12488766,0.98441,0.56673,0.325285,13.043433,4221762,3618640
"2015-3278","AC-21","SMRI ""Array""","Homo sapiens",44,6.5,1510,1997,"M","CAUC",54,"BP",45,9,"SUIC:OD","Left",7.1,"12/7/2015","BD",63.277756,0.428179,63277756,63277756,58086372,0.000802,6260205027,18882349,0.980937,0.40945,0.428179,10.990845,4299958,3172178
"2015-3279","AC-53","SMRI ""Array""","Homo sapiens",24,6.87,1255,2000,"F","CAUC",34,"Control",NA,NA,"CARDIAC","Right",8.3,"12/7/2015","CTL",57.533676,0.37214,57533676,57533676,53102332,0.000625,5637712604,15881915,0.974737,0.541275,0.37214,15.297786,7458866,6493228
"2015-3280","AC-3","SMRI ""Array""","Homo sapiens",26,6.42,1620,1995,"M","CAUC",43,"SCZ",21,22,"PNEUMONIA","Left",7.5,"12/7/2015","SCZ",52.45487,0.384515,52454870,52454870,48523548,0.000597,5151212733,13149566,0.978348,0.497387,0.384515,10.995068,5583917,4449298
"2015-3281","AC-27","SMRI ""Array""","Homo sapiens",13,6.5,1600,1998,"M","CAUC",37,"Control",NA,NA,"CARDIAC","Left",8.1,"12/7/2015","CTL",59.078738,0.529851,59078738,59078738,52897152,0.000708,5792361586,16190149,0.976968,0.464288,0.529851,20.10219,8101646,7464114
"2015-3282","AC-101","SMRI ""Array""","Homo sapiens",16,6.52,1340,2002,"M","CAUC",52,"SCZ",19,33,"PNEUMONIA","Right",7,"12/7/2015","SCZ",45.256708,0.507225,45256708,45256708,40840576,0.000657,4443803602,12748419,0.981717,0.489145,0.507225,17.044324,5225412,4519688
"2015-3283","AC-104","SMRI ""Array""","Homo sapiens",12,5.97,1484,2002,"M","CAUC",19,"BP",17,2,"OD","Right",7.4,"12/7/2015","BD",148.238904,0.691858,148238904,148238904,132938072,0.000869,14384226539,42533942,0.975839,0.450002,0.691858,21.753496,21490005,18651657
"2015-3284","AC-105","SMRI ""Array""","Homo sapiens",50,6.17,1290,2002,"F","CAUC",41,"Control",NA,NA,"CARDIAC","Right",7,"12/7/2015","CTL",74.587812,0.665679,74587812,74587812,68085208,0.000688,7286835078,19053714,0.979035,0.443713,0.665679,16.80785,7475891,6436368
"2015-35","N-25","SMRI ""New""","Homo sapiens",61,6.43,1390,2003,"F","CAUC",19,"BP",14,5,"SUIC:INHALED HELIUM","Right",6.1,"1/7/2015","BD",96.83317,0.612615,96833170,96833170,86866810,0.000817,9485878950,26655029,0.969734,0.375524,0.612615,14.077038,8163088,6845747
"2015-36","N-26","SMRI ""New""","Homo sapiens",65,6.59,1415,2003,"M","CAUC",24,"BP",18,6,"OD","Right",7.4,"1/7/2015","BD",87.82829,0.658718,87828290,87828290,78117086,0.00077,8445287851,25175003,0.926186,0.362738,0.658718,18.553665,11457656,9831269
"2015-37","N-27","SMRI ""New""","Homo sapiens",12,6.84,1390,2003,"M","CAUC",41,"Control",NA,NA,"CARDIAC","Left",8.5,"1/7/2015","CTL",110.446018,0.585013,110446018,110446018,99842158,0.000774,10645347968,32901053,0.938373,0.351014,0.585013,13.38184,11444595,9704818
"2015-38","N-28","SMRI ""New""","Homo sapiens",22,6.39,1379,2003,"F","CAUC",40,"SCZ",16,24,"CARDIAC","Right",7.9,"1/7/2015","SCZ",132.18358,0.616753,132183580,132183580,119041284,0.000717,12821528133,37828530,0.969749,0.394626,0.616753,11.337392,9882598,7829393
"2015-39","N-29","SMRI ""New""","Homo sapiens",37,6.52,1363,2003,"M","CAUC",64,"BP",32,32,"SUIC:OD","Left",8.1,"1/7/2015","BD",94.956634,0.587836,94956634,94956634,85824382,0.000579,9015006040,25262933,0.881887,0.384743,0.587836,17.462867,12818082,11272600
"2015-4","N-20","SMRI ""New""","Homo sapiens",36,6.77,1080,2002,"F","CAUC",49,"BP",21,28,"SUIC:JUMPED","Left",7.7,"12/31/2014","BD",89.52661,0.583862,89526610,89526610,78079736,0.000825,8786831206,27000871,0.982933,0.38315,0.583862,15.352435,9255269,7049968
"2015-40","N-30","SMRI ""New""","Homo sapiens",34,6.92,1423,2003,"M","CAUC",45,"Control",NA,NA,"CARDIAC","Right",8.3,"1/7/2015","CTL",105.061582,0.613063,105061582,105061582,94813408,0.000609,9866765714,26116027,0.829339,0.369304,0.613063,19.811504,18080415,16459088
"2015-41","N-31","SMRI ""New""","Homo sapiens",52,6.4,1520,2003,"F","CAUC",42,"BP",NA,NA,"CARDIAC","Left",6.8,"1/7/2015","BD",108.952494,0.615347,108952494,108952494,96535082,0.000823,10458528200,31463838,0.934022,0.359876,0.615347,17.506005,13517579,11643917
"2015-42","N-32","SMRI ""New""","Homo sapiens",32,6.65,1670,2003,"M","CAUC",28,"SCZ",25,3,"SUIC:JUMPED","Left",8.5,"1/7/2015","SCZ",109.483286,0.624991,109483286,109483286,98818518,0.00063,10416808195,28656607,0.874414,0.354,0.624991,16.588057,15413318,13740381
"2015-43","N-33","SMRI ""New""","Homo sapiens",62,6.73,1140,2003,"M","CAUC",47,"SCZ",25,22,"OD","Right",7.6,"1/7/2015","SCZ",90.761102,0.642829,90761102,90761102,81757172,0.000687,8646217599,24262653,0.889881,0.357873,0.642829,18.29661,12739322,11242694
"2015-45","N-35","SMRI ""New""","Homo sapiens",18,6.46,1233,2003,"F","CAUC",29,"BP",28,1,"SUIC:OD","Left",7.7,"1/7/2015","BD",95.507698,0.625145,95507698,95507698,86441970,0.000732,9215392349,26110200,0.923777,0.352907,0.625145,14.375088,10053081,8655442
"2015-46","N-36","SMRI ""New""","Homo sapiens",15,6.61,1338,2003,"F","CAUC",28,"SCZ",18,10,"OD","Left",7.8,"1/7/2015","SCZ",113.746736,0.628332,113746736,113746736,102352904,0.000655,10947422790,30845858,0.927871,0.362558,0.628332,14.066632,12348688,10623599
"2015-6","N-22","SMRI ""New""","Homo sapiens",20,6.71,1545,2003,"M","CAUC",44,"Control",NA,NA,"CARDIAC","Right",8.5,"12/31/2014","CTL",96.092628,0.58098,96092628,96092628,84376872,0.000822,9450358704,30526989,0.984674,0.373086,0.58098,12.532729,8184320,6787601
"2015-7","N-23","SMRI ""New""","Homo sapiens",9,6.57,1305,2003,"F","CAUC",61,"SCZ",23,38,"PNEUMONIA","Right",8.1,"12/31/2014","SCZ",96.932604,0.554935,96932604,96932604,86186184,0.000718,9484797567,28665677,0.983804,0.402319,0.554935,10.499033,6773116,5483709
"2015-8","N-24","SMRI ""New""","Homo sapiens",13,6.58,1376,2003,"F","CAUC",56,"BP",35,21,"CARDIAC","Right",8.3,"12/31/2014","BD",89.480328,0.535662,89480328,89480328,79946800,0.000737,8762871155,27101883,0.986584,0.387246,0.535662,8.889265,5914885,4734946
"2015-854","N-37","SMRI ""New""","Homo sapiens",35,6.67,1227,2003,"F","CAUC",53,"BP",33,20,"SUIC:OD","Left",7.1,"4/2/2015","BD",119.167398,0.554429,119167398,119167398,108696148,0.00078,11696352751,35039244,0.985895,0.364272,0.554429,10.60625,8655371,6887602
"2015-855","N-39","SMRI ""New""","Homo sapiens",115,6.51,1594,2003,"M","CAUC",46,"BP",20,26,"SUIC:STABBED","Left",5.6,"4/2/2015","BD",106.99414,0.630915,106994140,106994140,95758114,0.001058,10476422829,34760368,0.987004,0.385223,0.630915,16.001545,9258437,7670137
"2015-856","N-40","SMRI ""New""","Homo sapiens",32,6.54,1360,2004,"F","CAUC",49,"SCZ",22,27,"TRAUMA--INTERNAL BLEEDING","Right",6.4,"4/2/2015","SCZ",125.214248,0.558589,125214248,125214248,113990378,0.000835,12291719010,36816515,0.985358,0.374657,0.558589,11.534268,8163772,6638327
"2015-857","N-41","SMRI ""New""","Homo sapiens",29,6.83,1625,2004,"M","CAUC",38,"Control",NA,NA,"CARDIAC","Left",7,"4/2/2015","CTL",84.310028,0.562304,84310028,84310028,76814946,0.000856,8282709933,24961073,0.986968,0.370116,0.562304,11.367723,5123670,4088075
"2015-858","N-42","SMRI ""New""","Homo sapiens",21,6.67,1404,2004,"F","CAUC",44,"BP",25,19,"OD","Right",7.4,"4/2/2015","BD",123.08136,0.597124,123081360,123081360,110802018,0.000933,12101507505,37616146,0.987551,0.383835,0.597124,12.58934,9405625,7783465
"2015-859","N-43","SMRI ""New""","Homo sapiens",38,5.92,1350,2004,"M","CAUC",45,"SCZ",32,13,"UNDETERMINED","Left",6.9,"4/2/2015","SCZ",99.958574,0.52318,99958574,99958574,91662164,0.000816,9844385513,28635533,0.986025,0.373443,0.52318,8.282758,5770972,4503465
"2015-860","N-45","SMRI ""New""","Homo sapiens",33,6.48,1310,2004,"F","CAUC",36,"BP",15,21,"OD","Right",6.8,"4/2/2015","BD",128.088456,0.539028,128088456,128088456,117060542,0.000942,12579185296,36835168,0.986399,0.374988,0.539028,11.043771,8509312,6936937
"2015-861","N-46","SMRI ""New""","Homo sapiens",49,6.43,1380,2004,"F","CAUC",45,"SCZ",23,22,"CARDIAC","Right",6,"4/2/2015","SCZ",101.326772,0.581779,101326772,101326772,92125124,0.000824,9941387609,28342242,0.985326,0.373673,0.581779,12.745858,6600750,5151808
"2015-862","N-48","SMRI ""New""","Homo sapiens",32,6.84,1360,2004,"M","CAUC",57,"Control",NA,NA,"CARDIAC","Right",8.1,"4/2/2015","CTL",102.361374,0.542635,102361374,102361374,93132238,0.00084,10077635349,30500516,0.987621,0.367494,0.542635,10.565785,7089754,5829632
"2015-863","N-49","SMRI ""New""","Homo sapiens",21,6.51,1410,2004,"M","CAUC",54,"Control",NA,NA,"CARDIAC","Right",8.5,"4/2/2015","CTL",111.705724,0.575758,111705724,111705724,100914608,0.000851,10983412693,33300142,0.987439,0.368188,0.575758,12.039941,7661158,6332300
"2015-864","N-51","SMRI ""New""","Homo sapiens",11,6.02,1540,2004,"M","CAUC",63,"BP",26,37,"SUIC:OD","Left",6.5,"4/2/2015","BD",106.44741,0.573359,106447410,106447410,96796712,0.000698,10448694060,27398753,0.982557,0.395729,0.573359,10.94062,6746652,5426152
"2015-865","N-52","SMRI ""New""","Homo sapiens",40,6.29,1340,2005,"M","CAUC",44,"SCZ",16,28,"CARDIAC","Left",7.4,"4/2/2015","SCZ",116.17452,0.62322,116174520,116174520,105355878,0.000809,11416773900,32554404,0.985698,0.37762,0.62322,10.327873,7289606,5788739
"2015-891","N-38","SMRI ""New""","Homo sapiens",38,6.62,1099,2003,"F","CAUC",59,"SCZ",21,38,"ASPHYXIA","Right",8.1,"4/7/2015","SCZ",104.619474,0.597597,104619474,104619474,94772102,0.000832,10205519067,30376949,0.98047,0.367045,0.597597,12.455263,9058605,7606004
"2015-892","N-44","SMRI ""New""","Homo sapiens",90,6.33,1551,2004,"M","CAUC",54,"Control",NA,NA,"PULM EMBOL","Right",6.3,"4/7/2015","CTL",113.97396,0.612297,113973960,113973960,101684450,0.000831,11104395813,32684179,0.983012,0.403697,0.612297,16.024672,9848809,8364757
"2015-893","N-50","SMRI ""New""","Homo sapiens",20,6.3,1470,2004,"M","CAUC",63,"Control",NA,NA,"CARDIAC","Right",8.5,"4/7/2015","CTL",110.39939,0.56828,110399390,110399390,99845506,0.000779,10772509464,31600185,0.980624,0.372685,0.56828,12.784042,9140093,7706845
"2015-894","N-53","SMRI ""New""","Homo sapiens",33,6.32,1380,2005,"M","CAUC",52,"SCZ",23,29,"CARDIAC","Right",7.9,"4/7/2015","SCZ",117.20337,0.610742,117203370,117203370,105806366,0.000793,11407377734,33796584,0.981404,0.377737,0.610742,12.524453,9995352,8388980
"2015-895","N-54","SMRI ""New""","Homo sapiens",24,6.59,1510,2005,"M","CAUC",57,"Control",NA,NA,"CARDIAC","Left",8.5,"4/7/2015","CTL",122.989484,0.562963,122989484,122989484,112204326,0.000766,11879328718,33314912,0.967242,0.36991,0.562963,14.725957,13263948,11583761
"2015-896","N-55","SMRI ""New""","Homo sapiens",17,6.65,1460,2005,"M","CAUC",57,"Control",NA,NA,"CARDIAC","Left",9,"4/7/2015","CTL",82.732338,0.366295,82732338,82732338,77479106,7e-04,8118920479,23144482,0.981788,0.412947,0.366295,4.710226,5887919,3914528
"2015-897","N-56","SMRI ""New""","Homo sapiens",38,6.4,1540,2005,"M","CAUC",46,"SCZ",16,30,"OD","Right",9.2,"4/7/2015","SCZ",112.834948,0.649509,112834948,112834948,101674418,0.000741,10861489415,30625124,0.965598,0.362265,0.649509,16.29156,14011202,12521761
"2015-898","N-57","SMRI ""New""","Homo sapiens",39,6.66,1600,2005,"M","CAUC",63,"BP",22,41,"CARDIAC","Right",8.9,"4/7/2015","BD",113.664856,0.584025,113664856,113664856,102792908,0.000893,11092460811,33704356,0.980593,0.365235,0.584025,12.383857,10124194,8554157
"2015-899","N-58","SMRI ""New""","Homo sapiens",35,6.88,1570,2005,"M","CAUC",48,"BP",23,25,"SUIC:DROWNED","Left",8.8,"4/7/2015","BD",105.07516,0.584989,105075160,105075160,95489000,0.000721,10142448716,29549762,0.966776,0.384676,0.584989,15.227885,12790824,11283387


Name,Model,TrainedOn,Extracts,DatasetLink
assertion_dl,AssertionDLModel,"Trained on 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text with `embeddings_clinical`","hypothetical, present, absent, possible, conditional, associated_with_someone_else",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
assertion_ml,AssertionLogRegModel,"Trained on 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text with `embeddings_clinical`","hypothetical, present, absent, possible, conditional, associated_with_someone_else",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
assertion_dl_large,AssertionDLModel,"Trained on 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text with `embeddings_clinical`","hypothetical, present, absent, possible, conditional, associated_with_someone_else",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
chunkresolve_cpt_clinical,ChunkEntityResolverModel,Trained on Current Procedural Terminology dataset,,
chunkresolve_icd10cm_clinical,ChunkEntityResolverModel,Trained on ICD10 Clinical Modification datasetwith tenths of variations per code,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/
chunkresolve_icd10pcs_clinical,ChunkEntityResolverModel,Trained on ICD10 Procedure Coding System dataset,ICD10-PCS Codes and their normalized definition,https://www.icd10data.com/ICD10PCS/Codes
chunkresolve_icdo_clinical,ChunkEntityResolverModel,Trained on ICD-O Histology Behaviour dataset,ICD-O Codes and their normalized definition,https://apps.who.int/iris/bitstream/handle/10665/96612/9789241548496_eng.pdf
deidentify_rb,DeIdentificationModel,Rule based DeIdentifier based on `ner_deid`,,
deidentify_rb_no_regex,DeIdentificationModel,Rule based DeIdentifier based on `ner_deid`,,
embeddings_clinical,WordEmbeddingsModel,Trained on PubMed corpora,,
embeddings_healthcare,WordEmbeddingsModel,Trained on PubMed + ICD10 + UMLS + MIMIC III corpora,,
embeddings_healthcare_100d,WordEmbeddingsModel,Trained on PubMed + ICD10 + UMLS + MIMIC III corpora,,
embeddings_healthcare_200d,WordEmbeddingsModel,Trained on PubMed + ICD10 + UMLS + MIMIC III corpora,,
embeddings_healthcare_300d,WordEmbeddingsModel,Trained on PubMed + ICD10 + UMLS + MIMIC III corpora,,
embeddings_scielo_50d,WordEmbeddingsModel,Trained on Scielo Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_scielo_150d,WordEmbeddingsModel,Trained on Scielo Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_scielo_300d,WordEmbeddingsModel,Trained on Scielo Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_wiki_50d,WordEmbeddingsModel,Trained on Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_wiki_150d,WordEmbeddingsModel,Trained on Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_wiki_300d,WordEmbeddingsModel,Trained on Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_scielowiki_50d,WordEmbeddingsModel,Trained on Scielo Articles + Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_scielowiki_150d,WordEmbeddingsModel,Trained on Scielo Articles + Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_scielowiki_300d,WordEmbeddingsModel,Trained on Scielo Articles + Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
ner_bionlp,NerDLModel,Trained on Cancer Genetics (CG) task of the BioNLP Shared Task 2013 with `embeddings_clinical`,"Amino_acid, Anatomical_system, Cancer, Cell, Cellular_component, Developing_anatomical_Structure, Gene_or_gene_product, Immaterial_anatomical_entity, Multi-tissue_structure, Organ, Organism, Organism_subdivision, Simple_chemical, Tissue.",http://2013.bionlp-st.org/tasks/cancer-genetics
ner_clinical,NerDLModel,"Trained on 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text with `embeddings_clinical`.","Problem, Test, Treatment.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp
ner_diseases,NerDLModel,Trained on i2b2 with `embeddings_clinical.,Disease,
ner_drugs,NerDLModel,Trained on i2b2_med7 + FDA with `embeddings_clinical`.,DrugChem (Drug and Chemicals),https://www.i2b2.org/NLP/Medication
ner_healthcare,NerDLModel,"Trained on 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text with `embeddings_healthcare`.","Problem, Test, Treatment.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
ner_posology,NerDLModel,Trained on the 2018 i2b2 dataset and FDA Drug datasets with `embeddings_clinical`.,"Dosage, Drug, Duration, Form,  Frequency, Route, Strength.",https://open.fda.gov/
pos_clinical,PerceptronModel,Trained with MedPost dataset,,
spellcheck_clinical,ContextSpellCheckerModel,Trained with PubMed and i2b2 datasets,,
textmatch_cpt_token,TextMatcherModel,"Trai,ned on NER Synonym Augmented Procedural Terminology bigram tokens combined up to a window of one",,
textmatch_icdo_ner,TextMatcherModel,Trained on NER Synonym Augmented ICD Histology Behaviour bigram tokens up to a window of four,,
ner_cellular,NerDLModel,Trained on the JNLPBA corpus containing more than 2.404 publication abstracts with `embeddings_clinical`,"DNA, Cell_type, Cell_line, RNA, Protein.",http://www.geniaproject.org/
ner_anatomy,NerDLModel,Trained on the Anatomical Entity Mention (AnEM) corpus with `embeddings_clinical`,"Anatomical_system, Cell, Cellular_component, Developing_anatomical_structure, Immaterial_anatomical_entity, Multi-tissue_structure, Organ, Organism_subdivision, Organism_substance, Pathological_formation, Tissue.",http://www.nactem.ac.uk/anatomy/
ner_deid_enriched,NerDLModel,Trained on JSL enriched n2c2 2014: De-identification and Heart Disease Risk Factors Challenge datasets with `embeddings_clinical`,"Age, City, Country, Date, Doctor, Hospital, Idnum, Medicalrecord, Organization, Patient, Phone, Profession, State, Street, Username, Zip.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-2014/
ner_deid_large,NerDLModel,Trained on plain n2c2 2014: De-identification and Heart Disease Risk Factors Challenge datasets with `embeddings_clinical`,"Age, Contact, Date, Id, Location, Name, Profession.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-2014/
ner_jsl,NerDLModel,Trained on data gathered andmanually annotated by John Snow Labs,"Age, Diagnosis, Dosage, Drug_name, Frequency, Gender, Lab_name, Lab_result, Modifier, Name, Negation, Symptom_name",https://www.johnsnowlabs.com/data/
ner_jsl_enriched,NerDLModel,Trained on data gathered and manually annotated by John Snow Labs,"Age, Diagnosis, Dosage, Drug_name, Frequency, Gender, Lab_name, Lab_result, Modifier, Name, Negation, Symptom_name",https://www.johnsnowlabs.com/data/
ner_posology_large,NerDLModel,Trained on the 2018 i2b2 dataset and FDA Drug datasets with `embeddings_clinical`.,"Dosage, Drug, Duration, Form,  Frequency, Route, Strength.",https://open.fda.gov/
ner_posology_small,NerDLModel,Trained on the 2018 i2b2 dataset (no FDA) with `embeddings_clinical`.,"Dosage, Drug, Duration, Form,  Frequency, Route, Strength.",https://www.i2b2.org/NLP/Medication
ner_risk_factors,NerDLModel,Trained on plain n2c2 2014: De-identification and Heart Disease Risk Factors Challenge datasets with `embeddings_clinical`,"Cad, Diabetes, Family_hist, Hyperlipidemia, Hypertension, Medication, Obese, Phi, Smoker.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-2014/
chunkresolve_icd10cm_neoplasms_clinical,ChunkEntityResolverModel,"Trained on ICD10CM Dataset Ranges: C000-D489, R590-R599",ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/C00-D49
chunkresolve_icd10cm_puerile_clinical,ChunkEntityResolverModel,Trained on ICD10CM Dataset Range: O0000-O9989,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/O00-O9A
chunkresolve_icd10cm_diseases_clinical,ChunkEntityResolverModel,Trained on ICD10CM Dataset Range: A000-N989 Except Neoplasms and Musculoskeletal,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/
chunkresolve_icd10cm_injuries_clinical,ChunkEntityResolverModel,Trained on ICD10CM Dataset Range: S0000XA-S98929S ,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/S00-T88
chunkresolve_icd10cm_musculoskeletal_clinical,ChunkEntityResolverModel,Trained on ICD10CM Dataset Range: M0000-M9979XXS,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/M00-M99
chunkresolve_icd10cm_poisoning_ext_clinical,ChunkEntityResolverModel,Trained on ICD10CM Dataset Range: T1500XA-T879,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/S00-T88
ner_events_clinical,NerDLModel,Trained on i2b2 events data with `clinical_embeddings`,"Problem, Test, Treatment, Occurence, Clinical_Dept, Date, Evidential, Duration, Frequency, Admission, Discharge, Time",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
ner_clinical_large,NerDLModel,Trained on i2b2 augmented data with `clinical_embeddings`,"Problem, Test, Treatment",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
chunkresolve_loinc_clinical,ChunkEntityResolverModel,Trained on LOINC dataset with `embeddings_clinical`,LOINC Codes and ther Standard Name,https://loinc.org/
deidentify_large,DeIdentificatoinModel,"Trained on 10.000 Contact, Location, Name and Profession random replacements","Contact, Location, Name, Profession.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-2014/
ner_medmentions_coarse,NerDLModel,Trained on MedMentions dataset,,
chunkresolve_snomed_findings_clinical,ChunkEntityResolverModel,Trained on SNOMED CT Findings,Snomed Codes and their normalized definition,http://www.snomed.org/
ner_diag_proc,NerDLModel,Trained on CodiEsp Challenge dataset,"Diagnostico, Procedimiento",https://temu.bsc.es/codiesp/
ner_neoplasms,NerDLModel,Trained on MedMentions dataset,MalignantNeoplasm,https://temu.bsc.es/cantemist/
chunkresolve_rxnorm_cd_clinical,ChunkEntityResolverModel,Trained on December 2019 RxNorm Clinical Drugs (TTY=CD) ontology graph with `embeddings_clinical`,RxNorm Codes and their normalized definition,https://www.nlm.nih.gov/pubs/techbull/nd19/brief/nd19_rxnorm_december_2019_release.html
chunkresolve_rxnorm_scd_clinical,ChunkEntityResolverModel,Trained on December 2019 RxNorm Clinical Drugs (TTY=SCD) ontology graph with `embeddings_clinical`,RxNorm Codes and their normalized definition,https://www.nlm.nih.gov/pubs/techbull/nd19/brief/nd19_rxnorm_december_2019_release.html
chunkresolve_rxnorm_sbd_clinical,ChunkEntityResolverModel,Trained on December 2019 RxNorm Clinical Drugs (TTY=SBD) ontology graph with `embeddings_clinical`,RxNorm Codes and their normalized definition,https://www.nlm.nih.gov/pubs/techbull/nd19/brief/nd19_rxnorm_december_2019_release.html
re_clinical,RelationExtractionModel,Trained on i2b2 augmented data with `clinical_embeddings`,"TrIP (improved), TrWP (worsened), TrCP (caused problem), TrAP (administered), TrNAP (avoided), TeRP (revealed problem), TeCP (investigate problem), PIP (problems related)",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
re_temporal_events_clinical,RelationExtractionModel,Trained on i2b2 augmented data with `clinical_embeddings`,"TrIP (improved), TrWP (worsened), TrCP (caused problem), TrAP (administered), TrNAP (avoided), TeRP (revealed problem), TeCP (investigate problem), PIP (problems related)",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
re_temporal_events_enriched_clinical,RelationExtractionModel,Trained on i2b2 augmented data with `clinical_embeddings`,"Extracts: Temporal relations (BEFORE, AFTER, SIMULTANEOUS, BEGUN_BY, ENDED_BY, DURING, BEFORE_OVERLAP) between clinical events (`ner_events_clinical`)",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/


Date_Collected,Date_Processed,Processor,Farm,Sample_Location,Replicate,Time,Sample_ID,Subsample_ID,Size_Class,Subsample,Nematode,Annelid,Clam,HSC_egg,Gastropod,Copepod,Ostracod,Foraminifera,Empty_oyster,Single_clam_valve,Empty_gastropod,Empty_ostracod,Exoskeleton,Isopod,Amphipod,Unknown Star Organism,Unknown,Notes_during_Collection,Notes_during_Processing
6/2/20,11/11/20,Elizabeth,B,Control,1,11:57,Farm B Control 1,B-Control1-2mm,2,1,0,0,1,0,1,0,0,0,0,1,0,0,0,0,0,0,0,,1 full clam valve
6/2/20,11/11/20,Elizabeth,B,Control,1,11:57,Farm B Control 1,B-Control1-1mm,1,1,7,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,,3 whole clam valves
6/2/20,11/11/20,Elizabeth,B,Control,1,11:57,Farm B Control 1,B-Control1-0.5mm,0.5,1,16,2,4,0,0,0,0,0,0,3,2,0,0,0,0,0,0,,"4*4 nematodes; 3 single clam valve; one of the clams is full but gaping and it contains tissues. I think both empty gastropod shells in 0.5mm are the same species. For first shell, see pictures: FarmB_Control1_0.5mm_gastropodshell, FarmB_Control1_0.5mm_gastropodshell1. Second picture taken with above light source. For second shell, see FarmB_Control1_0.5mm_gastropodshell2"
6/2/20,11/12/20,Elizabeth,B,Control,2,12:00,Farm B Control 2,B-Control2-2mm,2,1,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,"1 full clam valve; 1 bivalve that looks like a razor mussel and there is tissue inside. See images: FarmB_Control2_2mm_bivalveseam, FarmB_Control2_2mm_bivalvetissue"
6/2/20,11/12/20,Elizabeth,B,Control,2,12:00,Farm B Control 2,B-Control2-1mm,1,1,17,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,,2 full clam valves
6/2/20,11/12/20,Elizabeth,B,Control,2,12:00,Farm B Control 2,B-Control2-0.5mm,0.5,1,48,4,1,0,0,0,1,0,0,7,1,0,0,0,0,0,0,,12*4 nematodes; 7 full single clam valves. Empty gastropod: FarmB_Control2_0.5mm_gastropodshell
6/2/20,11/12/20,Elizabeth,B,Control,3,12:00,Farm B Control 3,B-Control3-2mm,2,1,1,0,0,0,3,0,0,0,0,1,0,0,0,0,0,0,0,,Gastropods are eastern mud snail; 1 single clam shell
6/2/20,11/12/20,Elizabeth,B,Control,3,12:00,Farm B Control 3,B-Control3-1mm,1,1,20,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,,The empty gastropod shell is the same type as the one from FarmB_Alley2_1mm_gastropod; 2 single clam valves
6/2/20,11/12/20,Elizabeth,B,Control,3,12:00,Farm B Control 3,B-Control3-0.5mm,0.5,1,48,0,1,0,0,0,1,0,0,3,3,0,0,0,0,0,0,,12*4 nematodes; empty gastropod is an eastern mud snail; 3 single clam valves
6/2/20,11/9/20,Elizabeth,B,Alley,1,11:47,Farm B Alley 1,B-Alley1-2mm,2,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,11/9/20,Elizabeth,B,Alley,1,11:47,Farm B Alley 1,B-Alley1-1mm,1,1,7,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,11/9/20,Elizabeth,B,Alley,1,11:47,Farm B Alley 1,B-Alley1-0.5mm,0.5,1,52,5,0,0,0,0,1,0,0,2,1,0,0,0,0,0,0,, 13*4 nematodes; 2 single clam valves. image of fecal pellets: FarmB_Alley1_0.5mm_mystery
6/2/20,11/11/20,Elizabeth,B,Alley,2,11:50,Farm B Alley 2,B-Alley2-2mm,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,3 pieces of empty tubes but no worms
6/2/20,11/11/20,Elizabeth,B,Alley,2,11:50,Farm B Alley 2,B-Alley2-1mm,1,1,10,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,,not an organism but really cool spikey thing (FarmB_Alley2_1mm_cool). empty gastropod pic is FarmB_Alley2_1mm_gastropod
6/2/20,11/11/20,Elizabeth,B,Alley,2,11:50,Farm B Alley 2,B-Alley2-0.5mm,0.5,1,32,10,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,,8*4 nematodes;
6/2/20,11/12/20,Elizabeth,B,Alley,3,11:50,Farm B Alley 3,B-Alley3-2mm,2,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,,gastropods are eastern mud snail
6/2/20,11/12/20,Elizabeth,B,Alley,3,11:50,Farm B Alley 3,B-Alley3-1mm,1,1,12,1,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,,2 single clam valve
6/2/20,11/12/20,Elizabeth,B,Alley,3,11:50,Farm B Alley 3,B-Alley3-0.5mm,0.5,1,40,3,0,0,0,0,1,0,0,2,0,0,0,0,1,0,0,,10*4 nematodes; 2 single clam valves; mystery shrimpy organism: FarmB_Alley3_0.5mm_mystery. Dave says mystery organism is amphipod.
6/2/20,11/12/20,Elizabeth,B,Rack,1,11:50,Farm B Rack 1,B-Rack1-2mm,2,1,0,0,1,0,3,0,0,0,0,1,0,0,0,0,0,0,0,,Gastropods are eastern mud snails; one bivalve that has no tissues but valves are still attached: FarmB_UnderRack_2mm_bivalve
6/2/20,11/12/20,Elizabeth,B,Rack,1,11:50,Farm B Rack 1,B-Rack1-1mm,1,1,10,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,,2 single clam valves
6/2/20,11/12/20,Elizabeth,B,Rack,1,11:50,Farm B Rack 1,B-Rack1-0.5mm,0.5,1,48,2,3,0,0,0,0,0,0,1,2,0,0,0,0,0,0,,12*4 nematodes; 1 single clam valve; one empty gastropod shell is an eastern mud snail and the other empty gastropod is the same shell as species from FarmB_Alley2_1mm_gastropod
6/2/20,11/11/20,Elizabeth,B,Rack,2,11:53,Farm B Rack 2,B-Rack2-2mm,2,1,1,0,0,0,3,0,0,0,0,1,1,0,0,0,0,0,0,,One gastropod is giant! Part of it is above water so it was difficult to get a high quality image: FarmB_UnderRack_2mm_gastropod2. Is is most definitely an eastern mud snail. All snails are same species. 1 full clam valve. Many long tubes but do not appear to have worm inside (dark tube).
6/2/20,11/11/20,Elizabeth,B,Rack,2,11:53,Farm B Rack 2,B-Rack2-1mm,1,1,19,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,,
6/2/20,11/11/20,Elizabeth,B,Rack,2,11:53,Farm B Rack 2,B-Rack2-0.5mm,0.5,1,56,4,1,0,0,0,0,0,0,0,3,0,0,0,0,0,0,,14*4 nematodes;
6/2/20,11/11/20,Elizabeth,B,Rack,3,11:56,Farm B Rack 3,B-Rack3-2mm,2,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,,"BIG polychaete. picture of 2mm ""whelk"":  FarmB_UnderRack_2mm_gastropod, FarmB_UnderRack_2mm_gastropod1; Dave says it doesn't look quite like boonea impressa, might be mud snail (ilyanassa obsoleta)"
6/2/20,11/11/20,Elizabeth,B,Rack,3,11:56,Farm B Rack 3,B-Rack3-1mm,1,1,9,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,11/11/20,Elizabeth,B,Rack,3,11:56,Farm B Rack 3,B-Rack3-0.5mm,0.5,1,40,8,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,,10*4 nematodes; gastropod shell appears to be same species as earlier today
6/2/20,1/27/21,Elizabeth,A,Control,1,12:08,Farm A Control 1,A-Control1-2mm,2,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,1/27/21,Elizabeth,A,Control,1,12:08,Farm A Control 1,A-Control1-1mm,1,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,
6/2/20,1/27/21,Elizabeth,A,Control,1,12:08,Farm A Control 1,A-Control1-0.5mm,0.5,1,NA,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,1/25/21,Elizabeth,A,Control,2,12:10,Farm A Control 2,A-Control2-2mm,2,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Pebbles.
6/2/20,1/25/21,Elizabeth,A,Control,2,12:10,Farm A Control 2,A-Control2-1mm,1,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,Nematodes present.
6/2/20,1/25/21,Elizabeth,A,Control,2,12:10,Farm A Control 2,A-Control2-0.5mm,0.5,1,NA,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Nematodes present.
6/2/20,1/18/21,Elizabeth,A,Control,3,12:09,Farm A Control 3,A-Control3-2mm,2,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,There was one single full (unbroken but not attached to second valve) clam valve.
6/2/20,1/18/21,Elizabeth,A,Control,3,12:09,Farm A Control 3,A-Control3-1mm,1,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Some nematodes
6/2/20,1/18/21,Elizabeth,A,Control,3,12:09,Farm A Control 3,A-Control3-0.5mm,0.5,1,NA,3,0,0,0,1,0,0,0,1,0,0,0,0,0,0,2,,"Nematodes present. One unknown organism looks kind of like an ant - See images: FarmA_Control3_0.5mm_unknown, FarmA_Control3_0.5mm_unknownbottom, FarmA_Control3_0.5mm_unknowntop, FarmA_Control3_0.5mm_unknowntop2. Looks somewhat similar to isopod we've seen from Doris genus, but this organism is more narrow than the Doris images we've captured. SEcond unknown organism is different organism. See images: FarmA_Control3_0.5mm_unknown2, FarmA_Control3_0.5mm_unknown2.1. Picutre of copepod is: FarmA_Control3_0.5mm_copepod. Back half of copepod is missing. The copepod looks like Plankton from Spongebob Squarepants."
6/2/20,1/18/21,Elizabeth,A,Alley,1,12:56,Farm A Alley 1,A-Alley1-2mm,2,1,NA,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,Muddy; mud snails; still wet sediment,
6/2/20,1/18/21,Elizabeth,A,Alley,1,12:56,Farm A Alley 1,A-Alley1-1mm,1,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,Muddy; mud snails; still wet sediment,
6/2/20,1/18/21,Elizabeth,A,Alley,1,12:56,Farm A Alley 1,A-Alley1-0.5mm,0.5,1,NA,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,Muddy; mud snails; still wet sediment,Clam is the most common type we've been seeing
6/2/20,1/27/21,Elizabeth,A,Alley,2,11:58,Farm A Alley 2,A-Alley2-2mm,2,1,NA,2,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,,Single_clam_valve is a single oyster valve. Gastropod is the large snail species we've been seeing.
6/2/20,1/27/21,Elizabeth,A,Alley,2,11:58,Farm A Alley 2,A-Alley2-1mm,1,1,NA,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,
6/2/20,1/27/21,Elizabeth,A,Alley,2,11:58,Farm A Alley 2,A-Alley2-0.5mm,0.5,1,NA,3,1,0,0,0,0,0,0,1,2,0,0,0,0,0,0,,
6/2/20,1/20/21,Elizabeth,A,Alley,3,12:00,Farm A Alley 3,A-Alley3-2mm,2,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,One single clam valve: FarmA_Alley3_2mm_valve. One tubeworm tube but no evidence of worm inside.
6/2/20,1/20/21,Elizabeth,A,Alley,3,12:00,Farm A Alley 3,A-Alley3-1mm,1,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,Valve is the most common species we've been finding. Nematodes present.
6/2/20,1/20/21,Elizabeth,A,Alley,3,12:00,Farm A Alley 3,A-Alley3-0.5mm,0.5,1,NA,14,0,0,0,0,0,0,0,6,0,0,0,0,0,0,0,,Two single valves are the most common species we see in samples. 
6/2/20,1/18/21,Elizabeth,A,Rack,1,12:03,Farm A Rack 1,A-Rack1-2mm,2,1,NA,0,1,0,1,0,0,0,0,1,1,0,0,0,0,0,0,,"Empty gastropod is slipper shell - might be empty common slipper shell (Crepidula fornicata) - Farm A_Rack1_2mm_unknownshell, Farm A_Rack1_2mm_unknownshellbottom. Does this count as an animal for our analysis? Single clam valve might be little surf clam (mulinia lateralis), or northern quahog (merceneria merceneria). It is one of the common clams in these samples - Farm A_Rack1_2mm_singlevalve. Clam looks similar to coquina clam (Donax variabilis), but unsure what it is - FarmA_Rack1_2mm_clam1. Clam still contains flesh and both valves are still connected and intact. Gastropod contains tissues and is one of the species common to these samples - FarmA_Rack1_2mm_gastropod. Many empty worm tubes."
6/2/20,1/18/21,Elizabeth,A,Rack,1,12:03,Farm A Rack 1,A-Rack1-1mm,1,1,NA,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,,Single clam valve species is same as that found in 2mm. Nematodes present.
6/2/20,1/18/21,Elizabeth,A,Rack,1,12:03,Farm A Rack 1,A-Rack1-0.5mm,0.5,1,NA,4,0,0,0,0,0,0,0,1,4,0,0,0,0,0,0,,Empty gastropod shell is one of the common types we've seen in these samples - FarmA_Rack1_0.5mm_gastropod. Could it be Melampus bidentatus?
6/2/20,1/22/21,Elizabeth,A,Rack,2,12:06,Farm A Rack 2,A-Rack2-2mm,2,1,NA,2,0,0,4,0,0,0,0,2,0,0,0,0,0,0,0,,Picture of first worm is: FarmA_Rack2_2mm_worm. Picture of second worm is: FarmA_Rack2_2mm_worm2. Tubeworm tubes present. Picture of two single clam valves: FarmA_Rack2_2mm_valves. Note tha valves are different sizes so likely different individuals. Snails all appear to be same species. Three snails are about 2cm (too large to take image). Image of smaller snail: FarmA_Rack2_2mm_snail.
6/2/20,1/22/21,Elizabeth,A,Rack,2,12:06,Farm A Rack 2,A-Rack2-1mm,1,1,NA,2,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,,Picture of two worms: FarmA_Rack2_1mm_worms.
6/2/20,1/22/21,Elizabeth,A,Rack,2,12:06,Farm A Rack 2,A-Rack2-0.5mm,0.5,1,NA,9,0,0,0,0,0,0,0,5,2,0,0,0,0,0,0,,"Picture of empty snail shell is: FarmA_Rack2_0.5mm_snail. Pictures of second empty snail are: FarmA_Rack2_0.5mm_snail2, FarmA_Rack2_0.5mm_snail3."
6/2/20,1/27/21,Elizabeth,A,Rack,3,12:13,Farm A Rack 3,A-Rack3-2mm,2,1,NA,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,,Snail is the common large species we have seen
6/2/20,1/27/21,Elizabeth,A,Rack,3,12:13,Farm A Rack 3,A-Rack3-1mm,1,1,NA,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,,Snail is the common large species we have seen. Clam is most common species we see.
6/2/20,1/27/21,Elizabeth,A,Rack,3,12:13,Farm A Rack 3,A-Rack3-0.5mm,0.5,1,NA,18,1,0,0,0,0,0,0,6,4,0,0,0,0,0,0,,
6/2/20,1/29/21,Elizabeth,C,Control,1,12:05,Farm C Control 1,C-Control1-2mm,2,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Empty tube worm tubes: One very long one (~3cm) and several other fragmented tubes
6/2/20,1/29/21,Elizabeth,C,Control,1,12:05,Farm C Control 1,C-Control1-1mm,1,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,1/29/21,Elizabeth,C,Control,1,12:05,Farm C Control 1,C-Control1-0.5mm,0.5,1,NA,3,1,0,0,1,1,0,0,4,2,0,0,0,0,0,0,,"I think it's a copepod but doublecheck picture and ask for help: FarmC_Control1_0.5mm_amphipod1, FarmC_Control1_0.5mm_amphipod2"
6/2/20,1/27/21,Elizabeth,C,Control,2,12:10,Farm C Control 2,C-Control2-2mm,2,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,1/27/21,Elizabeth,C,Control,2,12:10,Farm C Control 2,C-Control2-1mm,1,1,NA,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,,Clam valves are both the small species that we commonly see.
6/2/20,1/27/21,Elizabeth,C,Control,2,12:10,Farm C Control 2,C-Control2-0.5mm,0.5,1,NA,1,1,0,0,0,2,0,0,2,0,0,0,0,0,0,0,,Clams and single valves were the small specie we've been commonly seeing.
6/2/20,1/22/21,Elizabeth,C,Control,3,12:10,Farm C Control 3,C-Control3-2mm,2,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,Picture of clam valve is: FarmC_Control3_2mm_valve. One tube from a tubeworm: FarmC_Control3_2mm_tube.
6/2/20,1/22/21,Elizabeth,C,Control,3,12:10,Farm C Control 3,C-Control3-1mm,1,1,NA,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Picture of clam is: FarmC_Control3_1mm_clam.
6/2/20,1/22/21,Elizabeth,C,Control,3,12:10,Farm C Control 3,C-Control3-0.5mm,0.5,1,NA,2,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,,
6/2/20,1/20/21,Elizabeth,C,Alley,1,12:20,Farm C Alley 1,C-Alley1-2mm,2,1,NA,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,Narrow,"Listed slipper shell as an empty gastropod: FarmC_Alley1_2mm_unknown1, FarmC_Alley1_2mm_unknown2. There is a tubeworm tube that is about 2cm long."
6/2/20,1/20/21,Elizabeth,C,Alley,1,12:20,Farm C Alley 1,C-Alley1-1mm,1,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,Narrow,
6/2/20,1/20/21,Elizabeth,C,Alley,1,12:20,Farm C Alley 1,C-Alley1-0.5mm,0.5,1,NA,2,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,Narrow,"Excluded unkown organism that might be part of a worm: FarmC_Alley1_0.5mm_unknown1. Image of annelid is FarmC_Alley1_0.5mm_worm. Two of the single clam valves appear to be same species: FarmC_Alley1_0.5mm_valve1, FarmC_Alley1_0.5mm_valve2"
6/2/20,1/25/21,Elizabeth,C,Alley,2,12:14,Farm C Alley 2,C-Alley2-2mm,2,1,NA,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,,"Two of the single clam valves are the species we commonly see and one of the valves looks like a razor clam: FarmC_Alley2_2mm_clams, FarmC_Alley2_2mm_clams2. Maybe razor clam is Little Green Razor Clam or Common Razor Clam."
6/2/20,1/25/21,Elizabeth,C,Alley,2,12:14,Farm C Alley 2,C-Alley2-1mm,1,1,NA,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,,"Single clam valve is the common species that we've been seeing. Gastropod is one of the common ones we have seen: FarmC_Alley2_1mm_snail, FarmC_Alley2_1mm_snail2."
6/2/20,1/25/21,Elizabeth,C,Alley,2,12:14,Farm C Alley 2,C-Alley2-0.5mm,0.5,1,NA,2,1,0,0,0,0,0,0,5,1,0,0,0,0,0,0,,"Clam is the small common type of clam that we've been seeing. Gastropod is: FarmC_Alley2_0.5mm_snail, FarmC_Alley2_0.5mm_snail2"
6/2/20,1/25/21,Elizabeth,C,Alley,3,12:17,Farm C Alley 3,C-Alley3-2mm,2,1,NA,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,,Snail is the large species that we commonly see. Single clam valve is the small clam species that we commonly see. 
6/2/20,1/25/21,Elizabeth,C,Alley,3,12:17,Farm C Alley 3,C-Alley3-1mm,1,1,NA,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Razor clam is transparent: FarmC_Alley3_1mm_razor
6/2/20,1/25/21,Elizabeth,C,Alley,3,12:17,Farm C Alley 3,C-Alley3-0.5mm,0.5,1,NA,2,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,,Worms are typical species we've been seeing. Clam valves are from typical species we've seen.
6/2/20,1/18/21,Elizabeth,C,Rack,1,12:06,Farm C Rack 1,C-Rack1-2mm,2,1,NA,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,,Both gastropods are the species we have seen most often. I took a picture of the smaller gastropod: FarmC_Rack1_2mm_gastropod
6/2/20,1/18/21,Elizabeth,C,Rack,1,12:06,Farm C Rack 1,C-Rack1-1mm,1,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,1/18/21,Elizabeth,C,Rack,1,12:06,Farm C Rack 1,C-Rack1-0.5mm,0.5,1,NA,1,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,,
6/2/20,1/25/21,Elizabeth,C,Rack,2,12:09,Farm C Rack 2,C-Rack2-2mm,2,1,NA,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,,Single clam valve: FarmC_Rack2_2mm_valve1. Gastropod is dark bron and has beaded/pimpled surface texture: FarmC_Rack2_2mm_snail; FarmC_Rack2_2mm_snail2. Empty tubeworm tubes are present.
6/2/20,1/25/21,Elizabeth,C,Rack,2,12:09,Farm C Rack 2,C-Rack2-1mm,1,1,NA,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,Nematodes present. Single clam valve is same species as intact clam. Intact (both valves) clam is: FarmC_Rack2_1mm_clam2.
6/2/20,1/25/21,Elizabeth,C,Rack,2,12:09,Farm C Rack 2,C-Rack2-0.5mm,0.5,1,NA,2,1,0,1,0,0,0,0,2,1,0,0,0,0,0,0,,"Clam is same species as those in 1mm size class. Listed slipper shell as empty gastropod: FarmC_Rack2_0.5mm_slipper1, FarmC_Rack2_0.5mm_slipper2."
6/2/20,1/20/21,Elizabeth,C,Rack,3,12:12,Farm C Rack 3,C-Rack3-2mm,2,1,NA,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,,Tubeworm tube in sample is about 1cm long. Image of bivalve shells is FarmC_Rack2_2mm_bivalve. Gastropod species is one we've seen in other samples; see image FarmC_Rack2_2mm_gastropod.
6/2/20,1/20/21,Elizabeth,C,Rack,3,12:12,Farm C Rack 3,C-Rack3-1mm,1,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,"Nematodes present. Single clam valve is the species we see commonly, and image is FarmC_Rack2_1mm_clam"
6/2/20,1/20/21,Elizabeth,C,Rack,3,12:12,Farm C Rack 3,C-Rack3-0.5mm,0.5,1,NA,1,0,0,0,0,1,0,0,0,3,0,0,0,0,0,0,,One empty gastropod is same species we've seen in other samples - FarmC_Rack2_0.5mm_gastropod. Second empty gastropod is another species - FarmC_Rack2_0.5mm_gastrpod2. Third gastropod image is FarmC_Rack2_0.5mm_gastropod3. Worm image is FarmC_Rack2_0.5mm_worm. Ostracod image is FarmC_Rack2_0.5mm_ostracod. Nematodes present.

SN.,size of cluster,cluster member,merge reason,first match count,second match count
0,76,"['able', 'leader', 'ability', 'skills', 'capable', 'intelligence', 'smart', 'leadership', 'wise', 'knowledgeable', 'diplomacy', 'good', 'basic', 'kindness', 'well', 'morality', 'honest', 'honesty', 'integrity', 'unity', 'whole', 'knowledge', 'compassion', 'achievement', 'situations', 'office', 'president', 'negotiator', 'time', 'term', 'experience', 'serve', 'qualified', 'character', 'qualities', 'logical', 'fulfilled', 'different', 'empathy', 'empathize', 'understanding', 'sense', 'u', 'motives', 'think', 'political', 'politics', 'sociology', 'ideas', 'deliberate', 'problem', 'nice', 'polite', 'course', 'run', 'working', 'making', 'constitution', 'goals', 'work', 'care', 'caring', 'solving', 'determination', 'management', 'decisions', 'decisiveness', 'compromise', 'teamwork', 'selfless', 'prejudice', 'prejudices', 'dedication', 'promises', 'dedicated', 'commitment']","[((Synset('ability.n.02'), 'possession of the qualities (especially mental qualities) required to do something or get something done'), (Synset('cognition.n.01'), 'the psychological result of perception and learning and reasoning'))]","(15, (0, 'leadership', 17, 29))","(0, None)"
1,7,"['ethic', 'systems', 'relations', 'groups', 'people', 'country', 'county']","[((Synset('forgivingness.n.01'), 'tendency to be kind and forgiving'), (Synset('compassion.n.02'), 'the humane quality of understanding the suffering of others and wanting to do something about it'))]","(3, (2, 'relate to diverse groups', 8, 17))","(0, None)"
2,5,"['friendly', 'approachable', 'willingness', 'calm', 'agreeable']","[((Synset('kindness.n.03'), 'a kind act'), (Synset('accomplishment.n.01'), 'the action of accomplishing something'))]","(4, (1, 'diplomacy', 18, 22))","(1, (0, 'leadership', 17, 29))"
3,2,"['trustworthy', 'trustworthiness']","[((Synset('intelligence.n.02'), 'a unit responsible for gathering and interpreting information about an enemy'), (Synset('agency.n.01'), 'an administrative unit of government'))]","(2, (6, 'honesty', 7, 10))","(0, None)"
4,2,"['common', 'lot']","[((Synset('president_of_the_united_states.n.01'), 'the person who holds the office of head of state of the United States government'), (Synset('negotiator.n.01'), 'someone who negotiates (confers with others in order to reach a settlement)'))]","(1, (5, 'intelligence/knowledge', 9, 12))","(0, None)"
5,2,"['sure', 'confident']","[((Synset('presidency.n.01'), 'the tenure of a president'), (Synset('term.n.02'), 'a limited period of time'))]","(1, (8, 'confident', 3, 3))","(0, None)"
6,2,"['strong', 'hard']","[((Synset('ability.n.01'), 'the quality of being able to perform; a quality that permits or facilitates achievement or accomplishment'), (Synset('quality.n.01'), 'an essential and distinguishing attribute of something or someone'))]","(1, (0, 'leadership', 17, 29))","(0, None)"
7,2,"['humility', 'humble']","[((Synset('quality.n.01'), 'an essential and distinguishing attribute of something or someone'), (Synset('logicality.n.01'), 'correct and valid reasoning'))]","(2, (9, 'humble', 2, 2))","(0, None)"
8,1,['long'],"[((Synset('suffice.v.01'), 'be sufficient; be adequate, either in quality or quantity'), (Synset('satisfy.v.01'), 'meet the requirements or expectations of'))]","(1, (0, 'leadership', 17, 29))","(0, None)"
9,1,['proud'],"[((Synset('quality.n.01'), 'an essential and distinguishing attribute of something or someone'), (Synset('difference.n.01'), 'the quality of being unlike or dissimilar'))]","(1, (8, 'confident', 3, 3))","(0, None)"
10,1,['mature'],"[((Synset('compassion.n.01'), ""a deep awareness of and sympathy for another's suffering""), (Synset('empathy.n.01'), ""understanding and entering into another's feelings""))]","(1, (0, 'leadership', 17, 29))","(0, None)"
11,1,['eloquent'],"[((Synset('understanding.n.01'), 'the cognitive condition of someone who understands'), (Synset('sense.n.05'), 'a natural appreciation or ability'))]","(1, (1, 'diplomacy', 18, 22))","(0, None)"
12,1,['appeals'],"[((Synset('character.n.08'), 'a written symbol that is used to represent speech'), (Synset('u.n.03'), 'the 21st letter of the Roman alphabet'))]","(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
13,1,['idiot'],"[((Synset('ethical_motive.n.01'), 'motivation based on ideas of right and wrong'), (Synset('motivation.n.01'), 'the psychological feature that arouses an organism to action toward a desired goal; the reason for the action; that which gives purpose and direction to behavior'))]","(1, (5, 'intelligence/knowledge', 9, 12))","(0, None)"
14,1,['born'],"[((Synset('situation.n.03'), 'a complex or critical or unusual difficulty'), (Synset('problem.n.01'), 'a state of difficulty that needs to be resolved'))]","(0, None)","(0, None)"
15,1,['vast'],"[((Synset('kindness.n.03'), 'a kind act'), (Synset('politeness.n.02'), 'the act of showing regard for others'))]","(1, (5, 'intelligence/knowledge', 9, 12))","(0, None)"
16,1,['preferably'],"[((Synset('feel_for.v.01'), 'share the suffering of'), (Synset('care.v.01'), 'feel concern or interest'))]","(0, None)","(0, None)"
17,1,['genuine'],"[((Synset('settle.v.03'), 'settle conclusively; come to terms'), (Synset('compromise.v.02'), 'settle by concession'))]","(1, (1, 'diplomacy', 18, 22))","(0, None)"
18,1,['exceptionally'],"[((Synset('compromise.n.01'), 'a middle way between two extremes'), (Synset('teamwork.n.01'), 'cooperative work done by a team (especially when it is effective)'))]","(1, (5, 'intelligence/knowledge', 9, 12))","(0, None)"
19,1,['progressive'],"[((Synset('compromise.n.01'), 'a middle way between two extremes'), (Synset('selflessness.n.02'), 'acting with less concern for yourself than for the success of the joint activity'))]","(0, None)","(0, None)"
20,1,['oriented'],"[((Synset('influence.v.01'), 'have and exert influence or effect'), (Synset('prejudice.v.02'), ""influence (somebody's) opinion in advance""))]","(1, (0, 'leadership', 17, 29))","(0, None)"
21,1,['others'],"[((Synset('compromise.n.01'), 'a middle way between two extremes'), (Synset('commitment.n.02'), 'the act of binding yourself (intellectually or emotionally) to a course of action'))]","(1, (1, 'diplomacy', 18, 22))","(0, None)"
22,1,['level-headed'],"[((Synset('friendliness.n.02'), 'a friendly disposition'), (Synset('willingness.n.01'), 'cheerful compliance'))]","(1, (0, 'leadership', 17, 29))","(0, None)"
23,1,['international'],"[((Synset('friendliness.n.02'), 'a friendly disposition'), (Synset('composure.n.01'), 'steadiness of mind under stress'))]","(1, (3, 'political skills ', 9, 16))","(0, None)"
24,1,["i'm"],"[((Synset('friendliness.n.02'), 'a friendly disposition'), (Synset('agreeableness.n.02'), 'a temperamental disposition to be agreeable'))]","(0, None)","(0, None)"
25,1,['together'],"[((Synset('park.n.02'), 'a piece of open land for recreational use in an urban area'), (Synset('lot.n.02'), 'a parcel of land having fixed boundaries'))]","(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
26,1,['sophisticated'],"[((Synset('ethic.n.01'), 'the principles of right and wrong that are accepted by an individual or a social group'), (Synset('relation_back.n.01'), '(law) the principle that an act done at a later time is deemed by law to have occurred at an earlier time'))]","(1, (0, 'leadership', 17, 29))","(0, None)"
27,1,['inclusivity'],"[((Synset('system.n.02'), 'a group of independent but interrelated elements comprising a unified whole'), (Synset('group.n.01'), 'any number of entities (members) considered as a unit'))]","(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
28,1,['join'],"[((Synset('group.n.01'), 'any number of entities (members) considered as a unit'), (Synset('people.n.01'), '(plural) any group of human beings (men or women or children) collectively'))]","(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
29,1,['controlling'],"[((Synset('people.n.01'), '(plural) any group of human beings (men or women or children) collectively'), (Synset('nation.n.02'), 'the people who live in a nation or country'))]","(1, (0, 'leadership', 17, 29))","(0, None)"
30,1,['passion'],"[((Synset('country.n.02'), 'the territory occupied by a nation'), (Synset('county.n.02'), '(United States) the largest administrative district within a state'))]","(1, (4, 'determination', 8, 13))","(0, None)"
31,1,['umm'],NA,"(0, None)","(0, None)"
32,1,['bravery'],NA,"(1, (8, 'confident', 3, 3))","(0, None)"
33,1,['someone'],NA,"(0, None)","(0, None)"
34,1,['crucial'],NA,"(1, (0, 'leadership', 17, 29))","(0, None)"
35,1,['underprivileged'],NA,"(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
36,1,['stressful'],NA,"(1, (0, 'leadership', 17, 29))","(0, None)"
37,1,['levelheadedness'],NA,"(1, (0, 'leadership', 17, 29))","(0, None)"
38,1,['peaceful'],NA,"(1, (0, 'leadership', 17, 29))","(0, None)"
39,1,['ulterior'],NA,"(1, (6, 'honesty', 7, 10))","(0, None)"
40,1,['equality'],NA,"(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
41,1,['politically'],NA,"(1, (3, 'political skills ', 9, 16))","(0, None)"


collection_id,collection_label,member_id,part_label
g000,unspecified organism group,p0000,unspecified part
g000,unspecified organism group,p0001,entire organism
g001,woody angiosperms,p0000,unspecified part
g001,woody angiosperms,p0001,entire organism
g001,woody angiosperms,p0002,bark
g001,woody angiosperms,p0003,twig
g001,woody angiosperms,p0005,leaf
g001,woody angiosperms,p0007,inflorescence
g001,woody angiosperms,p0008,fruit
g001,woody angiosperms,p0009,seed
g001,woody angiosperms,p0012,flower
g002,herbaceous angiosperms,p0000,unspecified part
g002,herbaceous angiosperms,p0001,entire organism
g002,herbaceous angiosperms,p0004,stem
g002,herbaceous angiosperms,p0005,leaf
g002,herbaceous angiosperms,p0007,inflorescence
g002,herbaceous angiosperms,p0008,fruit
g002,herbaceous angiosperms,p0009,seed
g002,herbaceous angiosperms,p0012,flower
g003,gymnosperms,p0000,unspecified part
g003,gymnosperms,p0001,entire organism
g003,gymnosperms,p0002,bark
g003,gymnosperms,p0003,twig
g003,gymnosperms,p0005,leaf
g003,gymnosperms,p0006,cone
g003,gymnosperms,p0009,seed
g003,gymnosperms,p0010,male cone
g003,gymnosperms,p0011,female cone
g007,fishes,p0001,entire organism
g007,fishes,p0000,unspecified part
g007,fishes,p0013,head
g007,fishes,p0027,skull
g007,fishes,p0030,fin
g009,mammals,p0001,entire organism
g009,mammals,p0000,unspecified part
g009,mammals,p0013,head
g009,mammals,p0028,cranium
g009,mammals,p0029,mandible
g009,mammals,p0027,skull
g010,birds,p0001,entire organism
g010,birds,p0000,unspecified part
g010,birds,p0013,head
g010,birds,p0028,cranium
g010,birds,p0029,mandible
g010,birds,p0027,skull
g010,birds,p0017,wing
g010,birds,p0031,egg
g011,reptiles/amphibians,p0001,entire organism
g011,reptiles/amphibians,p0000,unspecified part
g011,reptiles/amphibians,p0013,head
g011,reptiles/amphibians,p0028,cranium
g011,reptiles/amphibians,p0029,mandible
g011,reptiles/amphibians,p0027,skull
g011,reptiles/amphibians,p0026,genitalia
g008,grasses,p0000,unspecified part
g008,grasses,p0001,entire organism
g012,insects,p0000,unspecified part
g012,insects,p0001,entire organism
g012,insects,p0013,head
g012,insects,p0014,thorax
g012,insects,p0015,abdomen
g012,insects,p0016,leg
g012,insects,p0017,wing
g012,insects,p0018,antenna
g012,insects,p0019,forewing
g012,insects,p0020,hindwing
g012,insects,p0021,foreleg
g012,insects,p0022,midleg
g012,insects,p0023,hindleg
g012,insects,p0024,eye
g012,insects,p0026,genitalia
p0000,unspecified morphological feature,r0000,unspecified orientation
p0001,entire organism,r0000,unspecified orientation
p0001,entire organism,r0001,anterior side
p0001,entire organism,r0002,posterior side
p0001,entire organism,r0003,lateral side
p0001,entire organism,r0004,right side
p0001,entire organism,r0005,left side
p0001,entire organism,r0006,dorsal side
p0001,entire organism,r0007,ventral side
p0013,head,r0000,unspecified orientation
p0013,head,r0001,anterior side
p0013,head,r0003,lateral side
p0013,head,r0004,right side
p0013,head,r0005,left side
p0013,head,r0006,dorsal side
p0013,head,r0007,ventral side
p0014,thorax,r0000,unspecified orientation
p0014,thorax,r0003,lateral side
p0014,thorax,r0004,right side
p0014,thorax,r0005,left side
p0014,thorax,r0006,dorsal side
p0014,thorax,r0007,ventral side
p0015,abdomen,r0000,unspecified orientation
p0015,abdomen,r0002,posterior side
p0015,abdomen,r0003,lateral side
p0015,abdomen,r0004,right side
p0015,abdomen,r0005,left side
p0015,abdomen,r0006,dorsal side
p0015,abdomen,r0007,ventral side
p0016,leg,r0003,lateral side
p0017,wing,r0000,unspecified orientation
p0017,wing,r0006,dorsal side
p0017,wing,r0007,ventral side
p0018,antenna,r0003,lateral side
p0019,forewing,r0000,unspecified orientation
p0019,forewing,r0006,dorsal side
p0019,forewing,r0007,ventral side
p0020,hindwing,r0000,unspecified orientation
p0020,hindwing,r0006,dorsal side
p0020,hindwing,r0007,ventral side
p0021,foreleg,r0003,lateral side
p0022,midleg,r0003,lateral side
p0023,hindleg,r0003,lateral side
p0024,eye,r0003,lateral side
p0026,genitalia,r0000,unspecified orientation
p0026,genitalia,r0002,posterior side
p0026,genitalia,r0003,lateral side
p0026,genitalia,r0004,right side
p0026,genitalia,r0005,left side
p0026,genitalia,r0006,dorsal side
p0026,genitalia,r0007,ventral side
p0002,bark,r0003,lateral side
p0003,twig,r0003,lateral side
p0005,leaf,r0008,adaxial (top) side
p0005,leaf,r0009,abaxial (bottom) side
p0004,stem,r0003,lateral side
p0001,entire organism,r0010,apical side
p0007,inflorescence,r0003,lateral side
p0007,inflorescence,r0010,apical side
p0008,fruit,r0010,apical side
p0008,fruit,r0003,lateral side
p0001,entire organism,r0011,basal side
p0008,fruit,r0011,basal side
p0009,seed,r0003,lateral side
p0012,flower,r0010,apical (front) side
p0012,flower,r0003,lateral side
p0012,flower,r0011,basal (back) side
p0006,cone,r0010,apical (front) side
p0006,cone,r0003,lateral side
p0006,cone,r0011,basal (back) side
p0027,skull,r0006,dorsal side
p0027,skull,r0007,ventral side
p0027,skull,r0003,lateral side
p0028,cranium,r0006,dorsal side
p0028,cranium,r0007,ventral side
p0028,cranium,r0003,lateral side
p0029,mandible,r0006,dorsal side
p0029,mandible,r0007,ventral side
p0029,mandible,r0003,lateral side
p0030,fin,r0003,lateral side
p0031,egg,r0003,lateral side
p0010,male cone,r0010,apical (front) side
p0010,male cone,r0003,lateral side
p0010,male cone,r0011,basal (back) side
p0011,female cone,r0010,apical (front) side
p0011,female cone,r0003,lateral side
p0011,female cone,r0011,basal (back) side

Run,Assay Type,AvgSpotLen,Bases,BioProject,BioSample,Bytes,Center Name,Consent,DATASTORE filetype,DATASTORE provider,DATASTORE region,dev_stage,Experiment,Instrument,Library Name,LibraryLayout,LibrarySelection,LibrarySource,Organism,Platform,ReleaseDate,Sample Name,sample_name,sex,SRA Study,strain,host,bioproject_id,Description,sample_title,biotic_relationship,replicate
DRR029433,RNA-Seq,202,9740523628,PRJDB3457,SAMD00024932,6015442140,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",1st stage larvae,DRX026493,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019559,SvL1,mix,DRP002634,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis 1st stage larvae,S.venezuelensis_L1,,
DRR029434,RNA-Seq,202,6404337482,PRJDB3457,SAMD00024932,3791411031,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",1st stage larvae,DRX026494,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019559,SvL1,mix,DRP002634,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis 1st stage larvae,S.venezuelensis_L1,,
DRR029435,RNA-Seq,202,9992095438,PRJDB3457,SAMD00024935,6175532991,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",3st stage infective larvae,DRX026495,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019557,SviL3,female,DRP002632,HH1,,PRJDB3457,Strongyloides venezuelensis 3rd stage infective larvae,S.venezuelensis_iL3,,
DRR029436,RNA-Seq,202,4702786846,PRJDB3457,SAMD00024935,2744178187,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",3st stage infective larvae,DRX026496,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019557,SviL3,female,DRP002632,HH1,,PRJDB3457,Strongyloides venezuelensis 3rd stage infective larvae,S.venezuelensis_iL3,,
DRR029437,RNA-Seq,202,9144401832,PRJDB3457,SAMD00024933,5641673572,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",3st stage larvae in lung,DRX026497,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019599,SvL3lung,female,DRP002639,HH1,Mus musculus,PRJDB3457,Strongyloides venezuelensis 3rd stage larvae in lung,S.venezuelensis_L3lung,,
DRR029438,RNA-Seq,202,3711262978,PRJDB3457,SAMD00024933,2150951649,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",3st stage larvae in lung,DRX026498,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019599,SvL3lung,female,DRP002639,HH1,Mus musculus,PRJDB3457,Strongyloides venezuelensis 3rd stage larvae in lung,S.venezuelensis_L3lung,,
DRR029439,RNA-Seq,202,8747297102,PRJDB3457,SAMD00024934,5370153220,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",young adult female,DRX026499,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019561,SvYAF,female,DRP002636,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis young adult females,S.venezuelensis_YoungAdult,,
DRR029440,RNA-Seq,202,4784200724,PRJDB3457,SAMD00024934,2768158304,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",young adult female,DRX026500,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019561,SvYAF,female,DRP002636,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis young adult females,S.venezuelensis_YoungAdult,,
DRR029441,RNA-Seq,202,10883623246,PRJDB3457,SAMD00024930,6754221540,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",adult female,DRX026501,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019530,SvAF,female,DRP002629,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis adult females,S.venezuelensis_Adult,,
DRR029442,RNA-Seq,202,4484826624,PRJDB3457,SAMD00024930,2623093390,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",adult female,DRX026502,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019530,SvAF,female,DRP002629,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis adult females,S.venezuelensis_Adult,,
DRR029443,RNA-Seq,202,9484330664,PRJDB3457,SAMD00024936,5843368867,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",induced 3rd stage infective larvae 1day,DRX026503,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019562,SviL3_1d,female,DRP002637,HH1,,PRJDB3457,Strongyloides venezuelensis 3rd stage infective larvae induced invitro (1day),S.venezuelensis_iL3induced1day,,
DRR029444,RNA-Seq,202,7762833740,PRJDB3457,SAMD00024937,4792084214,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",induced 3rd stage infective larvae 5day,DRX026504,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019558,SviL3_5d,female,DRP002633,HH1,,PRJDB3457,Strongyloides venezuelensis 3rd stage infective larvae induced in vitoro (5day),S.venezuelensis_iL3induced5day,,
DRR029445,RNA-Seq,202,6026968354,PRJDB3457,SAMD00024931,3485957516,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",egg,DRX026505,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019560,SvEgg,mix,DRP002635,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis Eggs,S.venezuelensis_Egg,,
DRR029282,RNA-Seq,202,7639514760,PRJDB3457,SAMD00024931,4730590553,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",egg,DRX026342,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2016-05-08T00:00:00Z,DRS019560,SvEgg,mix,DRP002629,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis Eggs,S.venezuelensis_Egg,,
DRR106346,RNA-Seq,300,5422588800,PRJDB3457,SAMD00096905,3457258771,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099447,Illumina MiSeq,SvFFWTA1,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096905,N703_SvFFWTA1,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 1
DRR106347,RNA-Seq,300,5537360100,PRJDB3457,SAMD00096905,3493727295,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099447,Illumina MiSeq,SvFFWTA1,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096905,N703_SvFFWTA1,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 1
DRR106348,RNA-Seq,300,5591790300,PRJDB3457,SAMD00096906,3431321034,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099448,Illumina MiSeq,SvFFWTA2,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096906,N704_SvFFWTA2,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 2
DRR106349,RNA-Seq,300,5717313300,PRJDB3457,SAMD00096906,3463640394,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099448,Illumina MiSeq,SvFFWTA2,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096906,N704_SvFFWTA2,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 2
DRR106350,RNA-Seq,300,3915915900,PRJDB3457,SAMD00096907,2422579923,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099449,Illumina MiSeq,SvFFWTA3,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096907,N705_SvFFWTA3,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 3
DRR106351,RNA-Seq,300,4009223700,PRJDB3457,SAMD00096907,2449117284,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099449,Illumina MiSeq,SvFFWTA3,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096907,N705_SvFFWTA3,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 3
DRR106352,RNA-Seq,300,5360814900,PRJDB3457,SAMD00096908,3371355325,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099450,Illumina MiSeq,SvPFWTA1,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096908,N706_SvPFWTA1,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 1
DRR106353,RNA-Seq,300,5460815700,PRJDB3457,SAMD00096908,3394407218,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099450,Illumina MiSeq,SvPFWTA1,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096908,N706_SvPFWTA1,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 1
DRR106354,RNA-Seq,300,4443784200,PRJDB3457,SAMD00096909,2813562712,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099451,Illumina MiSeq,SvPFWTA2,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096909,N707_SvPFWTA2,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 2
DRR106355,RNA-Seq,300,4541997900,PRJDB3457,SAMD00096909,2842776067,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099451,Illumina MiSeq,SvPFWTA2,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096909,N707_SvPFWTA2,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 2
DRR106356,RNA-Seq,300,4735392300,PRJDB3457,SAMD00096910,3033850153,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099452,Illumina MiSeq,SvPFWTA3,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096910,N708_SvPFWTA3,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 3
DRR106357,RNA-Seq,300,4818647100,PRJDB3457,SAMD00096910,3053585186,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099452,Illumina MiSeq,SvPFWTA3,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096910,N708_SvPFWTA3,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 3

"PatientID","CultureID","culture_relative_age","organism"
"0491",782,0,"Staphylococcus aureus (MSSA)"
"0541",893,583,"Staphylococcus aureus (MRSA)"
"0541",895,505,"Staphylococcus aureus (MSSA)"
"0541",895,505,"Stenotrophomonas maltophilia complex"
"0541",895,505,"Haemophilus influenzae"
"0558",944,0,"Staphylococcus aureus (MSSA)"
"0558",944,0,"Pseudomonas aeruginosa"
"0561",958,691,"Staphylococcus aureus (MRSA)"
"0561",959,619,"Staphylococcus aureus (MRSA)"
"0543",4516,644,"Pseudomonas aeruginosa"
"0543",4516,644,"Pseudomonas aeruginosa"
"0543",4516,644,"Staphylococcus aureus (MSSA)"
"0362",4762,161,"Staphylococcus aureus (MSSA)"
"0561",4850,477,"Staphylococcus aureus (MRSA)"
"0543",4900,553,"Pseudomonas aeruginosa"
"0543",4900,553,"Staphylococcus aureus (MSSA)"
"0543",4900,553,"Pseudomonas aeruginosa"
"0541",4967,324,"Staphylococcus aureus (MRSA)"
"0541",4967,324,"Stenotrophomonas maltophilia complex"
"0362",5056,98,"Staphylococcus aureus (MRSA)"
"0543",5108,511,"Pseudomonas aeruginosa"
"0543",5108,511,"Pseudomonas aeruginosa"
"0543",5108,511,"Staphylococcus aureus (MSSA)"
"0541",5146,288,"Aspergillus fumigatus"
"0541",5146,288,"Staphylococcus aureus (MRSA)"
"0541",5146,288,"Staphylococcus aureus (MRSA)"
"0541",5317,254,"Aspergillus fumigatus"
"0541",5317,254,"Staphylococcus aureus (MRSA)"
"0541",5575,206,"enteric gram negative rod"
"0541",5575,206,"Staphylococcus aureus (MRSA)"
"0541",5575,206,"Stenotrophomonas maltophilia complex"
"0362",5583,0,"Staphylococcus aureus (MSSA)"
"0543",5625,413,"Staphylococcus aureus (MSSA)"
"0561",5698,315,"Staphylococcus aureus (MRSA)"
"0543",5791,384,"Pseudomonas aeruginosa"
"0543",5791,384,"Pseudomonas aeruginosa"
"0561",5864,286,"Staphylococcus aureus (MRSA)"
"0541",5971,138,"Aspergillus fumigatus"
"0541",5971,138,"Staphylococcus aureus (MSSA)"
"0561",5991,256,"Staphylococcus aureus (MRSA)"
"0543",6312,286,"Pseudomonas aeruginosa"
"0543",6312,286,"Pseudomonas aeruginosa"
"0543",6312,286,"Staphylococcus aureus (MSSA)"
"0541",6421,51,"Aspergillus fumigatus"
"0541",6421,51,"enteric gram negative rod"
"0541",6421,51,"Staphylococcus aureus (MRSA)"
"0561",6456,176,"Staphylococcus aureus (MRSA)"
"0561",6646,142,"Staphylococcus aureus (MRSA)"
"0541",6721,0,"Staphylococcus aureus (MSSA)"
"0543",6810,195,"Pseudomonas aeruginosa"
"0543",6810,195,"Pseudomonas aeruginosa"
"0543",6810,195,"Staphylococcus aureus (MSSA)"
"0561",6967,81,"Achromobacter species"
"0561",6967,81,"enteric gram negative rod"
"0561",6967,81,"Staphylococcus aureus (MRSA)"
"0561",7164,43,"Staphylococcus aureus (MRSA)"
"0561",7352,7,"Staphylococcus aureus (MRSA)"
"0561",7388,0,"Aspergillus fumigatus"
"0561",7388,0,"Staphylococcus aureus (MRSA)"
"0543",7400,84,"Pseudomonas aeruginosa"
"0543",7400,84,"Pseudomonas aeruginosa"
"0543",7400,84,"Staphylococcus aureus (MSSA)"
"0543",7587,42,"Pseudomonas aeruginosa"
"0543",7587,42,"Pseudomonas aeruginosa"
"0543",7587,42,"Staphylococcus aureus (MSSA)"
"0543",7837,0,"Pseudomonas aeruginosa"
"0543",7837,0,"Staphylococcus aureus (MSSA)"
"0076",11143,455,"Achromobacter xylosoxidans"
"0076",11144,414,"Achromobacter xylosoxidans"
"0076",11145,379,"Achromobacter xylosoxidans"
"0076",11146,279,"Achromobacter xylosoxidans"
"0076",11147,188,"Achromobacter xylosoxidans"
"0076",11148,72,"Achromobacter xylosoxidans"
"0076",11149,0,"Achromobacter xylosoxidans"
"0244",11262,545,"Achromobacter xylosoxidans"
"0076",11328,678,"Achromobacter xylosoxidans"
"0076",11329,617,"Achromobacter xylosoxidans"
"0076",11330,566,"Achromobacter xylosoxidans"
"0076",11331,527,"Achromobacter xylosoxidans"
"0244",11572,475,"Achromobacter xylosoxidans"
"0324",11765,373,"Achromobacter xylosoxidans"
"0324",11766,70,"Achromobacter xylosoxidans"
"0324",11767,0,"Achromobacter xylosoxidans"
"0367",11798,714,"Achromobacter xylosoxidans"
"0367",11799,671,"Achromobacter xylosoxidans"
"0487",11817,432,"Achromobacter xylosoxidans"
"0487",11818,398,"Achromobacter xylosoxidans"
"0487",11819,377,"Achromobacter xylosoxidans"
"0487",11820,357,"Achromobacter xylosoxidans"
"0487",11821,286,"Achromobacter xylosoxidans"
"0487",11822,238,"Achromobacter xylosoxidans"
"0487",11823,191,"Achromobacter xylosoxidans"
"0487",11824,161,"Achromobacter xylosoxidans"
"0487",11825,147,"Achromobacter xylosoxidans"
"0487",11826,105,"Achromobacter xylosoxidans"
"0487",11827,77,"Achromobacter xylosoxidans"
"0487",11828,56,"Achromobacter xylosoxidans"
"0487",11829,52,"Achromobacter xylosoxidans"
"0487",11830,27,"Achromobacter xylosoxidans"
"0487",11831,3,"Achromobacter xylosoxidans"
"0117",11945,679,"Alcaligenes species"
"0117",11946,385,"Alcaligenes species"
"0117",11946,385,"Aspergillus fumigatus"
"0117",11986,294,"Aspergillus fumigatus"
"0310",12128,305,"Aspergillus fumigatus"
"0310",12129,214,"Aspergillus fumigatus"
"0310",12130,109,"Aspergillus fumigatus"
"0310",12131,0,"Aspergillus fumigatus"
"0204",12153,293,"Aspergillus fumigatus"
"0204",12154,161,"Aspergillus fumigatus"
"0229",12254,441,"Aspergillus fumigatus"
"0244",11262,545,"Aspergillus fumigatus"
"0244",12387,493,"Aspergillus fumigatus"
"0244",11572,475,"Aspergillus fumigatus"
"0244",12388,353,"Aspergillus fumigatus"
"0244",12389,294,"Aspergillus fumigatus"
"0336",12570,318,"Aspergillus fumigatus"
"0336",12571,0,"Aspergillus fumigatus"
"0160",12593,623,"Aspergillus fumigatus"
"0233",12626,641,"Aspergillus fumigatus"
"0233",12627,551,"Aspergillus fumigatus"
"0233",12628,480,"Aspergillus fumigatus"
"0233",12629,295,"Aspergillus fumigatus"
"0328",12641,725,"Aspergillus fumigatus"
"0328",12642,217,"Aspergillus fumigatus"
"0320",12653,258,"Aspergillus fumigatus"
"0320",12654,237,"Aspergillus fumigatus"
"0320",12655,209,"Aspergillus fumigatus"
"0320",12656,90,"Aspergillus fumigatus"
"0320",12657,0,"Aspergillus fumigatus"
"0324",12669,691,"Aspergillus fumigatus"
"0324",12670,420,"Aspergillus fumigatus"
"0324",11767,0,"Aspergillus fumigatus"
"0324",12671,-22,"Aspergillus fumigatus"
"0328",12743,73,"Aspergillus fumigatus"
"0233",12750,97,"Aspergillus fumigatus"
"0199",12763,27,"Aspergillus fumigatus"
"0132",12787,728,"Aspergillus species"
"0229",12850,242,"Aspergillus species"
"0229",12851,46,"Aspergillus species"
"0172",12859,1,"Aspergillus species"
"0172",12860,0,"Aspergillus species"
"0244",12873,659,"Aspergillus species"
"0244",12874,185,"Aspergillus species"
"0336",12943,503,"Aspergillus species"
"0233",12959,389,"Aspergillus species"
"0233",12960,259,"Aspergillus species"
"0324",12979,707,"Aspergillus species"
"0324",12980,154,"Aspergillus species"
"0324",12981,151,"Aspergillus species"
"0199",13006,334,"Aspergillus species"
"0233",13009,134,"Aspergillus species"
"0199",13024,40,"Aspergillus species"
"0199",13025,0,"Aspergillus species"
"0244",13042,714,"Aspergillus terreus"
"0244",12387,493,"Burkholderia cepacia complex"
"0244",13199,451,"Burkholderia cepacia complex"
"0244",12388,353,"Burkholderia cepacia complex"
"0244",12389,294,"Burkholderia cepacia complex"
"0244",13200,252,"Burkholderia cepacia complex"
"0244",13201,218,"Burkholderia cepacia complex"
"0244",12874,185,"Burkholderia cepacia complex"
"0244",13202,153,"Burkholderia cepacia complex"
"0244",13203,70,"Burkholderia cepacia complex"
"0244",13204,43,"Burkholderia cepacia complex"
"0244",13466,224,"Burkholderia cepacia complex"
"0558",13814,539,"Enteric gram negative rods"
"0558",13815,385,"Enteric gram negative rods"
"0244",12874,185,"Enteric gram negative rods"
"0172",12859,1,"Enteric gram negative rods"
"0208",13945,322,"Enteric gram negative rods"
"0208",13946,251,"Enteric gram negative rods"
"0233",12628,480,"Enteric gram negative rods"
"0320",12657,0,"Enteric gram negative rods"
"0324",11767,0,"Enteric gram negative rods"
"0367",13961,97,"Enteric gram negative rods"
"0558",13968,287,"Enteric gram negative rods"
"0172",14101,612,"Hemophilus influenzae"
"0172",14102,588,"Hemophilus influenzae"
"0172",14103,300,"Hemophilus influenzae"
"0172",14104,220,"Hemophilus influenzae"
"0172",12859,1,"Hemophilus influenzae"
"0172",12860,0,"Hemophilus influenzae"
"0491",14326,643,"Hemophilus influenzae"
"0491",14327,412,"Hemophilus influenzae"
"0491",14328,407,"Hemophilus influenzae"
"0336",14341,671,"Hemophilus influenzae"
"0160",14342,644,"Hemophilus influenzae"
"0558",13814,539,"Hemophilus influenzae"
"0558",14370,471,"Hemophilus influenzae"
"0324",14382,527,"Hemophilus influenzae"
"0324",11766,70,"Hemophilus influenzae"
"0328",12743,73,"Hemophilus influenzae"
"0132",14493,637,"Mycelia sterilia"
"0132",14494,546,"Mycelia sterilia"
"0132",14495,406,"Mycelia sterilia"
"0132",14496,351,"Mycelia sterilia"
"0132",14497,301,"Mycelia sterilia"
"0132",14498,280,"Mycelia sterilia"
"0132",14499,203,"Mycelia sterilia"
"0132",14500,105,"Mycelia sterilia"
"0132",14501,0,"Mycelia sterilia"
"0229",14502,0,"Mycelia sterilia"
"0117",14522,202,"Nonfermenting gram negative rod"
"0199",13024,40,"Oral flora"
"0117",11986,294,"Pandoraea apista/pulmonicola"
"0117",14580,0,"Pandoraea pnomenusa"
"0244",13042,714,"Pandoraea sputorum"
"0244",12873,659,"Pandoraea sputorum"
"0244",14585,605,"Pandoraea sputorum"
"0244",11262,545,"Pandoraea sputorum"
"0244",11572,475,"Pandoraea sputorum"
"0244",13466,224,"Pandoraea sputorum"
"0244",14586,0,"Pandoraea sputorum"
"0244",14586,0,"Pandoraea sputorum"
"0199",14599,349,"Penicillium species"
"0076",11328,678,"Probable pseudomonas mendocina"
"0132",14495,406,"Pse domonas aeruginosa 3, cf"
"0117",11945,679,"Pseudomonas aeruginosa"
"0117",11946,385,"Pseudomonas aeruginosa"
"0117",11986,294,"Pseudomonas aeruginosa"
"0117",14522,202,"Pseudomonas aeruginosa"
"0117",14580,0,"Pseudomonas aeruginosa"
"0132",12787,728,"Pseudomonas aeruginosa"
"0132",14493,637,"Pseudomonas aeruginosa"
"0132",14494,546,"Pseudomonas aeruginosa"
"0132",14495,406,"Pseudomonas aeruginosa"
"0132",14496,351,"Pseudomonas aeruginosa"
"0132",14497,301,"Pseudomonas aeruginosa"
"0132",14498,280,"Pseudomonas aeruginosa"
"0132",14499,203,"Pseudomonas aeruginosa"
"0132",14500,105,"Pseudomonas aeruginosa"
"0132",14501,0,"Pseudomonas aeruginosa"
"0076",11143,455,"Pseudomonas aeruginosa"
"0076",11144,414,"Pseudomonas aeruginosa"
"0076",11145,379,"Pseudomonas aeruginosa"
"0076",11146,279,"Pseudomonas aeruginosa"
"0076",11147,188,"Pseudomonas aeruginosa"
"0076",11148,72,"Pseudomonas aeruginosa"
"0076",11149,0,"Pseudomonas aeruginosa"
"0310",14945,725,"Pseudomonas aeruginosa"
"0310",14946,627,"Pseudomonas aeruginosa"
"0310",14947,497,"Pseudomonas aeruginosa"
"0310",14948,403,"Pseudomonas aeruginosa"
"0310",12128,305,"Pseudomonas aeruginosa"
"0310",12129,214,"Pseudomonas aeruginosa"
"0310",12130,109,"Pseudomonas aeruginosa"
"0310",12131,0,"Pseudomonas aeruginosa"
"0204",12153,293,"Pseudomonas aeruginosa"
"0204",15058,0,"Pseudomonas aeruginosa"
"0229",15142,643,"Pseudomonas aeruginosa"
"0229",15143,559,"Pseudomonas aeruginosa"
"0229",15144,483,"Pseudomonas aeruginosa"
"0229",12254,441,"Pseudomonas aeruginosa"
"0229",12850,242,"Pseudomonas aeruginosa"
"0229",15145,130,"Pseudomonas aeruginosa"
"0229",12851,46,"Pseudomonas aeruginosa"
"0229",14502,0,"Pseudomonas aeruginosa"
"0244",13042,714,"Pseudomonas aeruginosa"
"0244",15752,667,"Pseudomonas aeruginosa"
"0244",12873,659,"Pseudomonas aeruginosa"
"0244",15753,644,"Pseudomonas aeruginosa"
"0244",14585,605,"Pseudomonas aeruginosa"
"0244",11262,545,"Pseudomonas aeruginosa"
"0244",12387,493,"Pseudomonas aeruginosa"
"0244",13199,451,"Pseudomonas aeruginosa"
"0244",15754,403,"Pseudomonas aeruginosa"
"0244",12388,353,"Pseudomonas aeruginosa"
"0244",12389,294,"Pseudomonas aeruginosa"
"0244",13200,252,"Pseudomonas aeruginosa"
"0244",13201,218,"Pseudomonas aeruginosa"
"0244",12874,185,"Pseudomonas aeruginosa"
"0244",13202,153,"Pseudomonas aeruginosa"
"0244",13203,70,"Pseudomonas aeruginosa"
"0244",13204,43,"Pseudomonas aeruginosa"
"0244",14586,0,"Pseudomonas aeruginosa"
"0076",11328,678,"Pseudomonas aeruginosa"
"0076",11329,617,"Pseudomonas aeruginosa"
"0076",11330,566,"Pseudomonas aeruginosa"
"0076",11331,527,"Pseudomonas aeruginosa"
"0336",12571,0,"Pseudomonas aeruginosa"
"0160",16738,714,"Pseudomonas aeruginosa"
"0160",14342,644,"Pseudomonas aeruginosa"
"0160",12593,623,"Pseudomonas aeruginosa"
"0160",16739,532,"Pseudomonas aeruginosa"
"0160",16740,427,"Pseudomonas aeruginosa"
"0160",16741,329,"Pseudomonas aeruginosa"
"0160",16742,231,"Pseudomonas aeruginosa"
"0160",16743,127,"Pseudomonas aeruginosa"
"0160",16744,98,"Pseudomonas aeruginosa"
"0160",16745,0,"Pseudomonas aeruginosa"
"0199",17282,506,"Pseudomonas aeruginosa"
"0199",17283,454,"Pseudomonas aeruginosa"
"0558",17357,126,"Pseudomonas aeruginosa"
"0199",12763,27,"Pseudomonas aeruginosa"
"0199",13025,0,"Pseudomonas aeruginosa"
"0172",17559,436,"Pseudomonas aeruginosa"
"0172",17560,399,"Pseudomonas aeruginosa"
"0172",17561,317,"Pseudomonas aeruginosa"
"0172",17561,317,"Pseudomonas aeruginosa"
"0172",14103,300,"Pseudomonas aeruginosa"
"0172",17562,280,"Pseudomonas aeruginosa"
"0172",14104,220,"Pseudomonas aeruginosa"
"0336",14341,671,"Pseudomonas aeruginosa"
"0336",17906,601,"Pseudomonas aeruginosa"
"0336",12570,318,"Pseudomonas aeruginosa"
"0336",17907,160,"Pseudomonas aeruginosa"
"0336",17908,104,"Pseudomonas aeruginosa"
"0336",17909,41,"Pseudomonas aeruginosa"
"0336",12571,0,"Pseudomonas aeruginosa"
"0336",12571,0,"Pseudomonas aeruginosa"
"0208",13945,322,"Pseudomonas aeruginosa"
"0208",13946,251,"Pseudomonas aeruginosa"
"0208",17933,0,"Pseudomonas aeruginosa"
"0233",12626,641,"Pseudomonas aeruginosa"
"0233",17938,557,"Pseudomonas aeruginosa"
"0233",12627,551,"Pseudomonas aeruginosa"
"0233",12628,480,"Pseudomonas aeruginosa"
"0233",12959,389,"Pseudomonas aeruginosa"
"0233",12629,295,"Pseudomonas aeruginosa"
"0233",12960,259,"Pseudomonas aeruginosa"
"0328",17949,427,"Pseudomonas aeruginosa"
"0328",17950,422,"Pseudomonas aeruginosa"
"0320",12657,0,"Pseudomonas aeruginosa"
"0487",11818,398,"Pseudomonas aeruginosa"
"0487",11819,377,"Pseudomonas aeruginosa"
"0487",11821,286,"Pseudomonas aeruginosa"
"0487",11822,238,"Pseudomonas aeruginosa"
"0487",11823,191,"Pseudomonas aeruginosa"
"0487",11824,161,"Pseudomonas aeruginosa"
"0487",11825,147,"Pseudomonas aeruginosa"
"0487",11827,77,"Pseudomonas aeruginosa"
"0487",11828,56,"Pseudomonas aeruginosa"
"0487",11829,52,"Pseudomonas aeruginosa"
"0487",11831,3,"Pseudomonas aeruginosa"
"0199",18020,699,"Pseudomonas aeruginosa"
"0199",18021,594,"Pseudomonas aeruginosa"
"0199",18022,386,"Pseudomonas aeruginosa"
"0199",13006,334,"Pseudomonas aeruginosa"
"0233",13009,134,"Pseudomonas aeruginosa"
"0199",18030,188,"Pseudomonas aeruginosa"
"0233",12750,97,"Pseudomonas aeruginosa"
"0233",12959,389,"Pseudomonas fluorescens"
"0199",14599,349,"Rhizopus species"
"0320",12654,237,"Scedosporium apiospermum"
"0320",12655,209,"Scedosporium apiospermum"
"0199",13025,0,"Scedosporium apiospermum"
"0132",14493,637,"Staphylococcus"
"0132",14496,351,"Staphylococcus"
"0132",14500,105,"Staphylococcus"
"0310",14945,725,"Staphylococcus"
"0310",12128,305,"Staphylococcus"
"0310",12131,0,"Staphylococcus"
"0204",15058,0,"Staphylococcus"
"0244",13042,714,"Staphylococcus aureus (MRSA)"
"0336",12571,0,"Staphylococcus"
"0160",16741,329,"Staphylococcus"
"0160",16743,127,"Staphylococcus"
"0160",16744,98,"Staphylococcus"
"0204",18089,266,"Staphylococcus"
"0172",18112,689,"Staphylococcus"
"0172",17559,436,"Staphylococcus"
"0172",17561,317,"Staphylococcus"
"0491",14326,643,"Staphylococcus"
"0491",18225,587,"Staphylococcus"
"0491",18226,496,"Staphylococcus"
"0491",14327,412,"Staphylococcus"
"0491",14328,407,"Staphylococcus"
"0336",17906,601,"Staphylococcus"
"0336",12943,503,"Staphylococcus"
"0336",12570,318,"Staphylococcus"
"0336",17907,160,"Staphylococcus"
"0336",17908,104,"Staphylococcus"
"0336",17909,41,"Staphylococcus"
"0336",12571,0,"Staphylococcus"
"0558",18270,729,"Staphylococcus"
"0558",13814,539,"Staphylococcus"
"0558",14370,471,"Staphylococcus"
"0558",13815,385,"Staphylococcus"
"0328",12641,725,"Staphylococcus"
"0328",18277,693,"Staphylococcus"
"0328",18278,602,"Staphylococcus"
"0328",17949,427,"Staphylococcus"
"0328",17950,422,"Staphylococcus"
"0328",18279,357,"Staphylococcus"
"0328",18280,324,"Staphylococcus"
"0328",18281,262,"Staphylococcus"
"0328",18282,240,"Staphylococcus"
"0324",12980,154,"Staphylococcus"
"0324",12981,151,"Staphylococcus"
"0324",11766,70,"Staphylococcus"
"0324",11767,0,"Staphylococcus"
"0324",12671,-22,"Staphylococcus"
"0367",18317,265,"Staphylococcus"
"0487",11820,357,"Staphylococcus"
"0487",11821,286,"Staphylococcus"
"0487",11822,238,"Staphylococcus"
"0328",12743,73,"Staphylococcus aureus"
"0558",18346,233,"Staphylococcus aureus"
"0491",18348,237,"Staphylococcus aureus"
"0558",17357,126,"Staphylococcus aureus"
"0491",18356,132,"Staphylococcus aureus"
"0160",18362,714,"Staphylococcus aureus"
"0233",13009,134,"Staphylococcus aureus (MRSA)"
"0233",12750,97,"Staphylococcus aureus (MRSA)"
"0491",18379,133,"Staphylococcus aureus (MRSA)"
"0117",11986,294,"Staphylococcus"
"0117",14522,202,"Staphylococcus"
"0229",15142,643,"Staphylococcus"
"0229",15143,559,"Staphylococcus"
"0229",12851,46,"Staphylococcus"
"0076",11328,678,"Staphylococcus"
"0076",11329,617,"Staphylococcus"
"0076",11330,566,"Staphylococcus"
"0160",14342,644,"Staphylococcus"
"0204",18440,315,"Staphylococcus"
"0204",12154,161,"Staphylococcus"
"0208",13945,322,"Staphylococcus"
"0208",13946,251,"Staphylococcus"
"0320",19084,272,"Staphylococcus"
"0320",12654,237,"Staphylococcus"
"0320",12655,209,"Staphylococcus"
"0320",12657,0,"Staphylococcus"
"0324",14382,527,"Staphylococcus"
"0324",12670,420,"Staphylococcus"
"0367",11799,671,"Staphylococcus"
"0367",19108,552,"Staphylococcus"
"0367",19109,454,"Staphylococcus"
"0558",13968,287,"Staphylococcus"
"0132",14494,546,"Staphylococcus aureus (MRSA)"
"0132",14499,203,"Staphylococcus aureus (MRSA)"
"0132",14501,0,"Staphylococcus aureus (MRSA)"
"0244",15752,667,"Staphylococcus aureus (MRSA)"
"0244",12873,659,"Staphylococcus aureus (MRSA)"
"0244",15753,644,"Staphylococcus aureus (MRSA)"
"0244",14585,605,"Staphylococcus aureus (MRSA)"
"0244",11262,545,"Staphylococcus aureus (MRSA)"
"0244",12387,493,"Staphylococcus aureus (MRSA)"
"0244",13199,451,"Staphylococcus aureus (MRSA)"
"0244",15754,403,"Staphylococcus aureus (MRSA)"
"0244",12388,353,"Staphylococcus aureus (MRSA)"
"0244",12389,294,"Staphylococcus aureus (MRSA)"
"0244",13200,252,"Staphylococcus aureus (MRSA)"
"0244",13201,218,"Staphylococcus aureus (MRSA)"
"0244",12874,185,"Staphylococcus aureus (MRSA)"
"0244",13202,153,"Staphylococcus aureus (MRSA)"
"0244",13203,70,"Staphylococcus aureus (MRSA)"
"0244",13204,43,"Staphylococcus aureus (MRSA)"
"0244",14586,0,"Staphylococcus aureus (MRSA)"
"0160",16738,714,"Staphylococcus aureus (MRSA)"
"0160",12593,623,"Staphylococcus aureus (MRSA)"
"0160",16739,532,"Staphylococcus aureus (MRSA)"
"0160",16740,427,"Staphylococcus aureus (MRSA)"
"0160",16742,231,"Staphylococcus aureus (MRSA)"
"0160",16745,0,"Staphylococcus aureus (MRSA)"
"0172",17560,399,"Staphylococcus aureus (MRSA)"
"0172",17561,317,"Staphylococcus aureus (MRSA)"
"0172",14103,300,"Staphylococcus aureus (MRSA)"
"0172",17562,280,"Staphylococcus aureus (MRSA)"
"0172",14104,220,"Staphylococcus aureus (MRSA)"
"0172",12859,1,"Staphylococcus aureus (MRSA)"
"0172",12860,0,"Staphylococcus aureus (MRSA)"
"0244",11572,475,"Staphylococcus aureus (MRSA)"
"0244",13466,224,"Staphylococcus aureus (MRSA)"
"0336",12571,0,"Staphylococcus aureus (MRSA)"
"0336",19354,-20,"Staphylococcus aureus (MRSA)"
"0233",12626,641,"Staphylococcus aureus (MRSA)"
"0233",17938,557,"Staphylococcus aureus (MRSA)"
"0233",12627,551,"Staphylococcus aureus (MRSA)"
"0233",12628,480,"Staphylococcus aureus (MRSA)"
"0233",12959,389,"Staphylococcus aureus (MRSA)"
"0233",12629,295,"Staphylococcus aureus (MRSA)"
"0233",12960,259,"Staphylococcus aureus (MRSA)"
"0320",12653,258,"Staphylococcus aureus (MRSA)"
"0324",11765,373,"Staphylococcus aureus"
"0324",19398,294,"Staphylococcus aureus (MRSA)"
"0367",11798,714,"Staphylococcus aureus (MRSA)"
"0367",19421,363,"Staphylococcus aureus (MRSA)"
"0367",19422,195,"Staphylococcus aureus (MRSA)"
"0367",13961,97,"Staphylococcus aureus (MRSA)"
"0367",19423,6,"Staphylococcus aureus (MRSA)"
"0367",19424,0,"Staphylococcus aureus (MRSA)"
"0367",19425,-15,"Staphylococcus aureus (MRSA)"
"0367",19426,-30,"Staphylococcus aureus (MRSA)"
"0487",11817,432,"Staphylococcus aureus (MRSA)"
"0487",11823,191,"Staphylococcus aureus (MRSA)"
"0487",11824,161,"Staphylococcus aureus (MRSA)"
"0487",11826,105,"Staphylococcus aureus (MRSA)"
"0487",11831,3,"Staphylococcus aureus (MRSA)"
"0244",11572,475,"Stenotrophomonas maltophilia"
"0172",12859,1,"Stenotrophomonas maltophilia complex"
"0208",13945,322,"Stenotrophomonas maltophilia complex"
"0208",13946,251,"Stenotrophomonas maltophilia complex"
"0208",17933,0,"Stenotrophomonas maltophilia complex"
"0233",12626,641,"Stenotrophomonas maltophilia complex"
"0558",13814,539,"Stenotrophomonas maltophilia complex"
"0328",12641,725,"Stenotrophomonas maltophilia complex"
"0328",18277,693,"Stenotrophomonas maltophilia complex"
"0328",18280,324,"Stenotrophomonas maltophilia complex"
"0328",18281,262,"Stenotrophomonas maltophilia complex"
"0328",12642,217,"Stenotrophomonas maltophilia complex"
"0324",12979,707,"Stenotrophomonas maltophilia complex"
"0324",12669,691,"Stenotrophomonas maltophilia complex"
"0324",14382,527,"Stenotrophomonas maltophilia complex"
"0324",12670,420,"Stenotrophomonas maltophilia complex"
"0324",11765,373,"Stenotrophomonas maltophilia complex"
"0324",19398,294,"Stenotrophomonas maltophilia complex"
"0324",11767,0,"Stenotrophomonas maltophilia complex"
"0324",12671,-22,"Stenotrophomonas maltophilia complex"


"","query","significant","p_value","term_size","query_size","intersection_size","precision","recall","term_id","source","term_name","effective_domain_size","source_order","parents","IC"
"1","antiquewhite4",TRUE,0.0107027778755038,168,95,8,0.0842105263157895,0.0476190476190476,"GO:0070507","GO:BP","regulation of microtubule cytoskeleton organization",15979,19174,"c(""GO:0000226"", ""GO:0032886"", ""GO:0051493"")",NA
"2","antiquewhite4",TRUE,0.0328688545468697,196,95,8,0.0842105263157895,0.0408163265306122,"GO:0032886","GO:BP","regulation of microtubule-based process",15979,9156,"c(""GO:0007017"", ""GO:0050794"")",NA
"3","antiquewhite4",TRUE,0.0214512687589629,9937,103,79,0.766990291262136,0.00795008553889504,"GO:0005737","GO:CC","cytoplasm",16963,402,"c(""GO:0005622"", ""GO:0110165"")",NA
"4","black",TRUE,0.0095846740818279,9588,211,148,0.701421800947867,0.01543596161869,"GO:0043231","GO:CC","intracellular membrane-bounded organelle",16963,2153,"c(""GO:0043227"", ""GO:0043229"")",NA
"5","black",TRUE,0.0108003330213634,12994,211,185,0.876777251184834,0.0142373403109127,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"6","black",TRUE,0.0373073765686741,11093,211,163,0.772511848341232,0.0146939511403588,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"7","black",TRUE,0.0495369390107976,12231,211,175,0.829383886255924,0.0143079061401357,"GO:0043226","GO:CC","organelle",16963,2148,"GO:0110165",NA
"8","blue",TRUE,0.0250678891495921,3,99,2,0.0202020202020202,0.666666666666667,"GO:0045120","GO:CC","pronucleus",16963,2457,"GO:0005634",NA
"9","blue",TRUE,0.0378314581776834,11572,93,82,0.881720430107527,0.00708606982371241,"GO:0005515","GO:MF","protein binding",16268,1897,"GO:0005488",NA
"10","brown",TRUE,0.0215993740728563,102,97,7,0.0721649484536082,0.0686274509803922,"KEGG:04064","KEGG","NF-kappa B signaling pathway",7747,234,"KEGG:00000",NA
"11","brown4",TRUE,0.0345817229376848,8,130,3,0.0230769230769231,0.375,"REAC:R-HSA-416550","REAC","Sema4D mediated inhibition of cell attachment and migration",10588,1930,"REAC:R-HSA-400685",NA
"12","coral1",TRUE,0.0440496515112906,6463,145,77,0.531034482758621,0.0119139718397029,"GO:0005634","GO:CC","nucleus",16963,310,"GO:0043231",NA
"13","darkgreen",TRUE,0.0122639940005792,12994,226,197,0.871681415929204,0.0151608434662152,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"14","darkgreen",TRUE,0.0198234366916543,9588,226,156,0.690265486725664,0.016270337922403,"GO:0043231","GO:CC","intracellular membrane-bounded organelle",16963,2153,"c(""GO:0043227"", ""GO:0043229"")",NA
"15","darkgreen",TRUE,0.0166763816209719,67,151,7,0.0463576158940397,0.104477611940299,"REAC:R-HSA-909733","REAC","Interferon alpha/beta signaling",10588,1102,"REAC:R-HSA-913531",NA
"16","darkgrey",TRUE,0.0037135938082669,4723,209,87,0.416267942583732,0.0184204954478086,"GO:0032991","GO:CC","protein-containing complex",16963,1590,"GO:0005575",NA
"17","darkgrey",TRUE,0.0324499352424078,8,209,3,0.0143540669856459,0.375,"GO:0030130","GO:CC","clathrin coat of trans-Golgi network vesicle",16963,1089,"c(""GO:0005794"", ""GO:0012510"", ""GO:0030125"")",NA
"18","darkgrey",TRUE,0.0482327512794707,9,209,3,0.0143540669856459,0.333333333333333,"GO:0012510","GO:CC","trans-Golgi network transport vesicle membrane",16963,840,"c(""GO:0030140"", ""GO:0030658"", ""GO:0030660"", ""GO:0030665"")",NA
"19","darkmagenta",TRUE,0.0197198203750484,2,145,2,0.0137931034482759,1,"GO:0031416","GO:CC","NatB complex",16963,1345,"GO:0031414",NA
"20","darkmagenta",TRUE,0.0404520088631474,2,133,2,0.0150375939849624,1,"GO:0071885","GO:MF","N-terminal protein N-methyltransferase activity",16268,10110,"GO:0008276",NA
"21","darkolivegreen",TRUE,0.0401083083630166,2,130,2,0.0153846153846154,1,"GO:0004557","GO:MF","alpha-galactosidase activity",16268,1156,"GO:0015925",NA
"22","darkolivegreen",TRUE,0.0401083083630166,2,130,2,0.0153846153846154,1,"GO:0050733","GO:MF","RS domain binding",16268,9124,"GO:0019904",NA
"23","darkorange2",TRUE,0.0171281553378554,12994,167,148,0.88622754491018,0.0113898722487302,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"24","darkorange2",TRUE,0.00666485754120884,159,89,9,0.101123595505618,0.0566037735849057,"KEGG:03013","KEGG","RNA transport",7747,204,"KEGG:00000",NA
"25","darkseagreen4",TRUE,0.0263846428822407,1025,111,19,0.171171171171171,0.0185365853658537,"GO:0043169","GO:MF","cation binding",16268,6833,"GO:0043167",NA
"26","darkturquoise",TRUE,0.00706695094258292,835,163,24,0.147239263803681,0.0287425149700599,"GO:0006396","GO:BP","RNA processing",15979,2421,"c(""GO:0010467"", ""GO:0016070"")",NA
"27","darkturquoise",TRUE,0.0195836690265514,768,163,22,0.134969325153374,0.0286458333333333,"GO:0016071","GO:BP","mRNA metabolic process",15979,5718,"GO:0016070",NA
"28","darkturquoise",TRUE,0.0205125835879357,105,163,8,0.049079754601227,0.0761904761904762,"GO:0045047","GO:BP","protein targeting to ER",15979,13225,"c(""GO:0006605"", ""GO:0072599"")",NA
"29","darkturquoise",TRUE,0.0249700713110824,178,163,10,0.0613496932515337,0.0561797752808989,"GO:0006413","GO:BP","translational initiation",15979,2437,"c(""GO:0006412"", ""GO:0044237"")",NA
"30","darkturquoise",TRUE,0.0270033862914432,109,163,8,0.049079754601227,0.073394495412844,"GO:0072599","GO:BP","establishment of protein localization to endoplasmic reticulum",15979,20662,"c(""GO:0070972"", ""GO:0072594"")",NA
"31","darkturquoise",TRUE,0.00141836689679498,4723,179,78,0.435754189944134,0.0165149269532077,"GO:0032991","GO:CC","protein-containing complex",16963,1590,"GO:0005575",NA
"32","darkturquoise",TRUE,0.00552985034608256,213,179,11,0.0614525139664804,0.0516431924882629,"GO:0005840","GO:CC","ribosome",16963,497,"GO:0043232",NA
"33","darkturquoise",TRUE,0.0150274008481814,637,179,19,0.106145251396648,0.0298273155416013,"GO:1990904","GO:CC","ribonucleoprotein complex",16963,4437,"GO:0032991",NA
"34","darkturquoise",TRUE,0.0398192741063755,46,179,5,0.0279329608938547,0.108695652173913,"GO:0022627","GO:CC","cytosolic small ribosomal subunit",16963,1035,"c(""GO:0015935"", ""GO:0022626"")",NA
"35","darkturquoise",TRUE,0.0437197130522843,106,179,7,0.0391061452513966,0.0660377358490566,"GO:0022626","GO:CC","cytosolic ribosome",16963,1034,"c(""GO:0005829"", ""GO:0005840"")",NA
"36","darkturquoise",TRUE,0.0437679162534517,10,179,3,0.0167597765363128,0.3,"GO:0005885","GO:CC","Arp2/3 protein complex",16963,531,"c(""GO:0015629"", ""GO:0032991"")",NA
"37","darkturquoise",TRUE,0.00175510914772097,1736,179,40,0.223463687150838,0.0230414746543779,"GO:0003723","GO:MF","RNA binding",16268,446,"GO:0003676",NA
"38","darkturquoise",TRUE,0.00048954578429686,94,122,9,0.0737704918032787,0.0957446808510638,"REAC:R-HSA-2408557","REAC","Selenocysteine synthesis",10588,1926,"REAC:R-HSA-2408522",NA
"39","darkturquoise",TRUE,0.00304516530889936,117,122,9,0.0737704918032787,0.0769230769230769,"REAC:R-HSA-2408522","REAC","Selenoamino acid metabolism",10588,1925,"REAC:R-HSA-71291",NA
"40","darkturquoise",TRUE,0.00472779900220764,94,122,8,0.0655737704918033,0.0851063829787234,"REAC:R-HSA-156842","REAC","Eukaryotic Translation Elongation",10588,780,"REAC:R-HSA-72766",NA
"41","darkturquoise",TRUE,0.00862654900113157,102,122,8,0.0655737704918033,0.0784313725490196,"REAC:R-HSA-72689","REAC","Formation of a pool of free 40S subunits",10588,854,"REAC:R-HSA-72737",NA
"42","darkturquoise",TRUE,0.0107524211247031,52,122,6,0.0491803278688525,0.115384615384615,"REAC:R-HSA-72695","REAC","Formation of the ternary complex, and subsequently, the 43S complex",10588,865,"REAC:R-HSA-72737",NA
"43","darkturquoise",TRUE,0.0119766608778296,292,122,13,0.10655737704918,0.0445205479452055,"REAC:R-HSA-72766","REAC","Translation",10588,2264,"REAC:R-HSA-392499",NA
"44","darkturquoise",TRUE,0.0169962080648984,112,122,8,0.0655737704918033,0.0714285714285714,"REAC:R-HSA-156827","REAC","L13a-mediated translational silencing of Ceruloplasmin expression",10588,1163,"REAC:R-HSA-72613",NA
"45","darkturquoise",TRUE,0.0181168523290671,113,122,8,0.0655737704918033,0.0707964601769911,"REAC:R-HSA-1799339","REAC","SRP-dependent cotranslational protein targeting to membrane",10588,1898,"REAC:R-HSA-72766",NA
"46","darkturquoise",TRUE,0.0181168523290671,113,122,8,0.0655737704918033,0.0707964601769911,"REAC:R-HSA-72706","REAC","GTP hydrolysis and joining of the 60S ribosomal subunit",10588,916,"REAC:R-HSA-72737",NA
"47","darkturquoise",TRUE,0.0189447752464881,183,122,10,0.0819672131147541,0.0546448087431694,"REAC:R-HSA-6791226","REAC","Major pathway of rRNA processing in the nucleolus and cytosol",10588,1247,"REAC:R-HSA-8868773",NA
"48","darkturquoise",TRUE,0.0222845935171712,59,122,6,0.0491803278688525,0.101694915254237,"REAC:R-HSA-72649","REAC","Translation initiation complex formation",10588,2265,"REAC:R-HSA-72662",NA
"49","darkturquoise",TRUE,0.0222845935171712,59,122,6,0.0491803278688525,0.101694915254237,"REAC:R-HSA-72702","REAC","Ribosomal scanning and start codon recognition",10588,1861,"REAC:R-HSA-72737",NA
"50","darkturquoise",TRUE,0.0245295662840984,60,122,6,0.0491803278688525,0.1,"REAC:R-HSA-72662","REAC","Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S",10588,100,"REAC:R-HSA-72737",NA
"51","darkturquoise",TRUE,0.0278204565861084,120,122,8,0.0655737704918033,0.0666666666666667,"REAC:R-HSA-72737","REAC","Cap-dependent Translation Initiation",10588,281,"REAC:R-HSA-72613",NA
"52","darkturquoise",TRUE,0.0278204565861084,120,122,8,0.0655737704918033,0.0666666666666667,"REAC:R-HSA-72613","REAC","Eukaryotic Translation Initiation",10588,781,"REAC:R-HSA-72766",NA
"53","darkturquoise",TRUE,0.029670969820756,193,122,10,0.0819672131147541,0.0518134715025907,"REAC:R-HSA-8868773","REAC","rRNA processing in the nucleus and cytosol",10588,2411,"REAC:R-HSA-72312",NA
"54","darkturquoise",TRUE,0.0302540472994886,90,122,7,0.0573770491803279,0.0777777777777778,"REAC:R-HSA-192823","REAC","Viral mRNA Translation",10588,2341,"REAC:R-HSA-168273",NA
"55","darkturquoise",TRUE,0.0302540472994886,90,122,7,0.0573770491803279,0.0777777777777778,"REAC:R-HSA-156902","REAC","Peptide chain elongation",10588,1544,"REAC:R-HSA-156842",NA
"56","darkturquoise",TRUE,0.0399046652905945,94,122,7,0.0573770491803279,0.074468085106383,"REAC:R-HSA-72764","REAC","Eukaryotic Translation Termination",10588,782,"REAC:R-HSA-72766",NA
"57","darkturquoise",TRUE,0.0451789158750672,203,122,10,0.0819672131147541,0.0492610837438424,"REAC:R-HSA-72312","REAC","rRNA processing",10588,2409,"REAC:R-HSA-8953854",NA
"58","darkturquoise",TRUE,0.045593853939934,96,122,7,0.0573770491803279,0.0729166666666667,"REAC:R-HSA-975956","REAC","Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)",10588,1437,"REAC:R-HSA-927802",NA
"59","floralwhite",TRUE,0.0492744170782885,483,105,11,0.104761904761905,0.0227743271221532,"GO:0000139","GO:CC","Golgi membrane",16963,20,"c(""GO:0005794"", ""GO:0098588"")",NA
"60","green",TRUE,0.0188313882466598,26,186,5,0.0268817204301075,0.192307692307692,"GO:0042558","GO:BP","pteridine-containing compound metabolic process",15979,11941,"c(""GO:0006725"", ""GO:0046483"", ""GO:1901360"", ""GO:1901564"")",NA
"61","green",TRUE,0.047473241433876,31,98,4,0.0408163265306122,0.129032258064516,"KEGG:01523","KEGG","Antifolate resistance",7747,192,"KEGG:00000",NA
"62","green",TRUE,0.0132841516869802,16,133,4,0.0300751879699248,0.25,"REAC:R-HSA-196757","REAC","Metabolism of folate and pterines",10588,1271,"REAC:R-HSA-196849",NA
"63","grey60",TRUE,0.0144153559183172,10,129,3,0.0232558139534884,0.3,"GO:0097440","GO:CC","apical dendrite",16963,3383,"GO:0030425",NA
"64","honeydew1",TRUE,0.0337586266197042,11,154,3,0.0194805194805195,0.272727272727273,"GO:0032433","GO:CC","filopodium tip",16963,1549,"c(""GO:0030175"", ""GO:0110165"")",NA
"65","ivory",TRUE,0.0496588711734215,2,156,2,0.0128205128205128,1,"GO:0030158","GO:MF","protein xylosyltransferase activity",16268,4787,"c(""GO:0035252"", ""GO:0140096"")",NA
"66","ivory",TRUE,0.0496588711734215,2,156,2,0.0128205128205128,1,"GO:0004923","GO:MF","leukemia inhibitory factor receptor activity",16268,1476,"GO:0004897",NA
"67","lavenderblush3",TRUE,0.0355053232399048,3,62,2,0.032258064516129,0.666666666666667,"REAC:R-HSA-8853336","REAC","Signaling by plasma membrane FGFR1 fusions",10588,2037,"REAC:R-HSA-1839124",NA
"68","lightpink4",TRUE,0.0250595045859288,3,97,2,0.0206185567010309,0.666666666666667,"GO:0000306","GO:CC","extrinsic component of vacuolar membrane",16963,58,"c(""GO:0005774"", ""GO:0031312"")",NA
"69","lightsteelblue",TRUE,0.0499388079223489,2,85,2,0.0235294117647059,1,"GO:0099527","GO:BP","postsynapse to nucleus signaling pathway",15979,22680,"GO:0098926",NA
"70","lightyellow",TRUE,4.25107632532058e-05,9937,263,194,0.737642585551331,0.0195229948676663,"GO:0005737","GO:CC","cytoplasm",16963,402,"c(""GO:0005622"", ""GO:0110165"")",NA
"71","lightyellow",TRUE,0.000682274006695181,12994,263,231,0.878326996197719,0.0177774357395721,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"72","lightyellow",TRUE,0.00373598060040482,261,263,15,0.0570342205323194,0.0574712643678161,"GO:0098798","GO:CC","mitochondrial protein complex",16963,3662,"c(""GO:0005739"", ""GO:0032991"")",NA
"73","magenta",TRUE,0.0258561610409862,77,61,5,0.0819672131147541,0.0649350649350649,"KEGG:05412","KEGG","Arrhythmogenic right ventricular cardiomyopathy (ARVC)",7747,460,"KEGG:00000",NA
"74","mediumorchid",TRUE,0.0142094000205865,32,242,6,0.0247933884297521,0.1875,"GO:0051965","GO:BP","positive regulation of synapse assembly",15979,16476,"c(""GO:0007416"", ""GO:0051962"", ""GO:0051963"", ""GO:1901890"")",NA
"75","mediumpurple2",TRUE,0.0496887720961713,7,259,3,0.0115830115830116,0.428571428571429,"GO:0015180","GO:MF","L-alanine transmembrane transporter activity",16268,3025,"c(""GO:0015179"", ""GO:0022858"")",NA
"76","mediumpurple3",TRUE,0.0465312429541571,48,151,5,0.033112582781457,0.104166666666667,"GO:0016836","GO:MF","hydro-lyase activity",16268,3830,"GO:0016835",NA
"77","mediumpurple3",TRUE,0.0497620346197972,2,151,2,0.0132450331125828,1,"GO:0004649","GO:MF","poly(ADP-ribose) glycohydrolase activity",16268,1242,"GO:0004553",NA
"78","mediumpurple3",TRUE,0.0170304940586918,147,86,8,0.0930232558139535,0.054421768707483,"KEGG:04072","KEGG","Phospholipase D signaling pathway",7747,239,"KEGG:00000",NA
"79","navajowhite2",TRUE,0.0195427286560799,55,147,6,0.0408163265306122,0.109090909090909,"GO:0075733","GO:BP","intracellular transport of virus",15979,21164,"c(""GO:0019058"", ""GO:0046794"")",NA
"80","navajowhite2",TRUE,0.026674238330664,58,147,6,0.0408163265306122,0.103448275862069,"GO:0046794","GO:BP","transport of virus",15979,14577,"c(""GO:0016032"", ""GO:0044766"")",NA
"81","navajowhite2",TRUE,0.0357730360030576,61,147,6,0.0408163265306122,0.0983606557377049,"GO:0044766","GO:BP","multi-organism transport",15979,13108,"c(""GO:0006810"", ""GO:1902579"")",NA
"82","navajowhite2",TRUE,0.0357730360030576,61,147,6,0.0408163265306122,0.0983606557377049,"GO:1902579","GO:BP","multi-organism localization",15979,25914,"c(""GO:0051179"", ""GO:0051704"")",NA
"83","navajowhite2",TRUE,0.0333527257382407,681,151,17,0.112582781456954,0.0249632892804699,"GO:0016604","GO:CC","nuclear body",16963,917,"c(""GO:0005654"", ""GO:0110165"")",NA
"84","navajowhite2",TRUE,0.0466236057209944,71,113,6,0.0530973451327434,0.0845070422535211,"REAC:R-HSA-159236","REAC","Transport of Mature mRNA derived from an Intron-Containing Transcript",10588,2281,"REAC:R-HSA-72202",NA
"85","orangered4",TRUE,0.0188998217697609,119,38,5,0.131578947368421,0.0420168067226891,"KEGG:04722","KEGG","Neurotrophin signaling pathway",7747,328,"KEGG:00000",NA
"86","paleturquoise",TRUE,0.0188645501946606,4576,178,78,0.438202247191011,0.0170454545454545,"GO:0006139","GO:BP","nucleobase-containing compound metabolic process",15979,2192,"c(""GO:0006725"", ""GO:0034641"", ""GO:0044238"", ""GO:0046483"", ""GO:1901360"")",NA
"87","paleturquoise",TRUE,0.0354572388718691,4731,178,79,0.443820224719101,0.0166983724371169,"GO:0046483","GO:BP","heterocycle metabolic process",15979,14371,"GO:0044237",NA
"88","paleturquoise",TRUE,0.0418210610414698,4751,178,79,0.443820224719101,0.0166280782993054,"GO:0006725","GO:BP","cellular aromatic compound metabolic process",15979,2726,"GO:0044237",NA
"89","paleturquoise",TRUE,0.0106594351745174,11093,186,147,0.790322580645161,0.0132516001081763,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"90","paleturquoise",TRUE,0.0153647970259671,12994,186,164,0.881720430107527,0.0126212097891334,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"91","paleturquoise",TRUE,0.00791718892723475,15,187,4,0.0213903743315508,0.266666666666667,"GO:0070628","GO:MF","proteasome binding",16268,9993,"GO:0044877",NA
"92","paleturquoise",TRUE,0.0114727760631452,6,123,3,0.024390243902439,0.5,"REAC:R-HSA-177135","REAC","Conjugation of benzoate with glycine",10588,358,"REAC:R-HSA-159424",NA
"93","paleturquoise",TRUE,0.0315807683224323,8,123,3,0.024390243902439,0.375,"REAC:R-HSA-177128","REAC","Conjugation of salicylate with glycine",10588,361,"REAC:R-HSA-159424",NA
"94","paleturquoise",TRUE,0.0384101834672204,125,123,8,0.0650406504065041,0.064,"REAC:R-HSA-162909","REAC","Host Interactions of HIV factors",10588,1013,"REAC:R-HSA-162906",NA
"95","paleturquoise",TRUE,0.0469693793678764,9,123,3,0.024390243902439,0.333333333333333,"REAC:R-HSA-156587","REAC","Amino Acid conjugation",10588,131,"REAC:R-HSA-156580",NA
"96","paleturquoise",TRUE,0.0469693793678764,9,123,3,0.024390243902439,0.333333333333333,"REAC:R-HSA-159424","REAC","Conjugation of carboxylic acids",10588,359,"REAC:R-HSA-156587",NA
"97","palevioletred3",TRUE,0.0124048323451663,176,187,11,0.0588235294117647,0.0625,"GO:0048511","GO:BP","rhythmic process",15979,15050,"GO:0008150",NA
"98","palevioletred3",TRUE,0.0261483951892659,156,187,10,0.053475935828877,0.0641025641025641,"GO:0007623","GO:BP","circadian rhythm",15979,3518,"GO:0048511",NA
"99","palevioletred3",TRUE,0.000978663102602954,3932,206,77,0.37378640776699,0.0195829094608342,"GO:0005654","GO:CC","nucleoplasm",16963,327,"c(""GO:0031981"", ""GO:0110165"")",NA
"100","palevioletred3",TRUE,0.0122153325587978,4639,206,83,0.402912621359223,0.0178917870230653,"GO:0031981","GO:CC","nuclear lumen",16963,1472,"c(""GO:0005634"", ""GO:0070013"")",NA
"101","palevioletred3",TRUE,0.0206081265779978,6463,206,106,0.514563106796116,0.0164010521429677,"GO:0005634","GO:CC","nucleus",16963,310,"GO:0043231",NA
"102","palevioletred3",TRUE,0.0359045427654479,5682,206,95,0.461165048543689,0.0167194649771207,"GO:0070013","GO:CC","intracellular organelle lumen",16963,2747,"c(""GO:0043229"", ""GO:0043233"")",NA
"103","palevioletred3",TRUE,0.0359045427654479,5682,206,95,0.461165048543689,0.0167194649771207,"GO:0031974","GO:CC","membrane-enclosed lumen",16963,1466,"GO:0110165",NA
"104","palevioletred3",TRUE,0.0359045427654479,5682,206,95,0.461165048543689,0.0167194649771207,"GO:0043233","GO:CC","organelle lumen",16963,2155,"c(""GO:0031974"", ""GO:0043226"")",NA
"105","palevioletred3",TRUE,0.0401550435566502,11333,206,162,0.786407766990291,0.0142945380746493,"GO:0043227","GO:CC","membrane-bounded organelle",16963,2149,"GO:0043226",NA
"106","pink",TRUE,0.0134650883266081,10,109,3,0.0275229357798165,0.3,"GO:0009982","GO:MF","pseudouridine synthase activity",16268,2770,"GO:0016866",NA
"107","plum1",TRUE,0.0150877018575057,7,146,3,0.0205479452054795,0.428571428571429,"GO:0032050","GO:MF","clathrin heavy chain binding",16268,5381,"GO:0030276",NA
"108","plum2",TRUE,0.0211632686816449,12994,217,189,0.870967741935484,0.0145451746960135,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"109","plum2",TRUE,0.0289528854697005,4850,217,88,0.405529953917051,0.0181443298969072,"GO:0005829","GO:CC","cytosol",16963,487,"c(""GO:0005737"", ""GO:0110165"")",NA
"110","purple",TRUE,0.000281674828110006,12994,240,213,0.8875,0.0163921810066184,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"111","purple",TRUE,0.000300550242641181,9937,240,176,0.733333333333333,0.0177115829727282,"GO:0005737","GO:CC","cytoplasm",16963,402,"c(""GO:0005622"", ""GO:0110165"")",NA
"112","purple",TRUE,0.0127848305076476,4850,240,97,0.404166666666667,0.02,"GO:0005829","GO:CC","cytosol",16963,487,"c(""GO:0005737"", ""GO:0110165"")",NA
"113","purple",TRUE,0.0182134435257094,944,240,29,0.120833333333333,0.0307203389830508,"GO:0031967","GO:CC","organelle envelope",16963,1460,"c(""GO:0031975"", ""GO:0043227"", ""GO:0043229"")",NA
"114","purple",TRUE,0.0182134435257094,944,240,29,0.120833333333333,0.0307203389830508,"GO:0031975","GO:CC","envelope",16963,1467,"GO:0110165",NA
"115","purple",TRUE,0.0424982496302885,11093,240,183,0.7625,0.0164968899305869,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"116","red",TRUE,0.0136194202753312,11093,213,166,0.779342723004695,0.014964391958893,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"117","royalblue",TRUE,0.0399979347802004,19,91,3,0.032967032967033,0.157894736842105,"GO:0035145","GO:CC","exon-exon junction complex",16963,1853,"c(""GO:0005634"", ""GO:0032991"")",NA
"118","salmon",TRUE,0.00926747565160542,2,103,2,0.0194174757281553,1,"GO:0042709","GO:CC","succinate-CoA ligase complex",16963,2095,"c(""GO:0045239"", ""GO:1902494"")",NA
"119","salmon",TRUE,0.0355586449113526,319,103,9,0.087378640776699,0.0282131661442006,"GO:0031301","GO:CC","integral component of organelle membrane",16963,1296,"c(""GO:0016021"", ""GO:0031300"")",NA
"120","salmon",TRUE,0.016924783602763,30,106,4,0.0377358490566038,0.133333333333333,"GO:0016878","GO:MF","acid-thiol ligase activity",16268,3871,"GO:0016877",NA
"121","salmon",TRUE,0.0329331511850015,37,68,4,0.0588235294117647,0.108108108108108,"REAC:R-HSA-5685938","REAC","HDR through Single Strand Annealing (SSA)",10588,983,"REAC:R-HSA-5693567",NA
"122","salmon",TRUE,0.040620074788158,39,68,4,0.0588235294117647,0.102564102564103,"REAC:R-HSA-5693616","REAC","Presynaptic phase of homologous DNA pairing and strand exchange",10588,1613,"REAC:R-HSA-5693579",NA
"123","salmon4",TRUE,0.00438990982226168,11093,205,162,0.790243902439024,0.0146038042008474,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"124","salmon4",TRUE,0.0164626372021568,12231,205,172,0.839024390243902,0.014062627749162,"GO:0043226","GO:CC","organelle",16963,2148,"GO:0110165",NA
"125","salmon4",TRUE,0.0480020059810289,11333,205,161,0.785365853658537,0.0142063001852996,"GO:0043227","GO:CC","membrane-bounded organelle",16963,2149,"GO:0043226",NA
"126","sienna3",TRUE,0.0499575557038343,2,113,2,0.0176991150442478,1,"REAC:R-HSA-380612","REAC","Metabolism of serotonin",10588,1282,"REAC:R-HSA-380615",NA
"127","skyblue1",TRUE,0.0238742335908663,9,97,3,0.0309278350515464,0.333333333333333,"REAC:R-HSA-198203","REAC","PI3K/AKT activation",10588,1499,"REAC:R-HSA-187037",NA
"128","skyblue2",TRUE,0.0413777101637395,3,65,2,0.0307692307692308,0.666666666666667,"REAC:R-HSA-5635851","REAC","GLI proteins bind promoters of Hh responsive genes to promote transcription",10588,906,"REAC:R-HSA-5632684",NA
"129","skyblue3",TRUE,0.0305289972040628,1608,172,36,0.209302325581395,0.0223880597014925,"GO:0046907","GO:BP","intracellular transport",15979,14653,"c(""GO:0006810"", ""GO:0051641"", ""GO:0051649"")",NA
"130","skyblue3",TRUE,0.0257513452198785,84,86,6,0.0697674418604651,0.0714285714285714,"KEGG:04012","KEGG","ErbB signaling pathway",7747,223,"KEGG:00000",NA
"131","skyblue3",TRUE,0.0182115935955634,36,118,5,0.0423728813559322,0.138888888888889,"REAC:R-HSA-109704","REAC","PI3K Cascade",10588,1495,"c(""REAC:R-HSA-112399"", ""REAC:R-HSA-9607240"")",NA
"132","skyblue3",TRUE,0.0270819070594607,39,118,5,0.0423728813559322,0.128205128205128,"REAC:R-HSA-112399","REAC","IRS-mediated signalling",10588,1044,"c(""REAC:R-HSA-2428928"", ""REAC:R-HSA-74751"")",NA
"133","skyblue3",TRUE,0.043525170510755,9,118,3,0.0254237288135593,0.333333333333333,"REAC:R-HSA-198203","REAC","PI3K/AKT activation",10588,1499,"REAC:R-HSA-187037",NA
"134","skyblue3",TRUE,0.043697964060931,43,118,5,0.0423728813559322,0.116279069767442,"REAC:R-HSA-2428928","REAC","IRS-related events triggered by IGF1R",10588,1045,"REAC:R-HSA-2428924",NA
"135","skyblue3",TRUE,0.043697964060931,43,118,5,0.0423728813559322,0.116279069767442,"REAC:R-HSA-2428924","REAC","IGF1R signaling cascade",10588,1022,"REAC:R-HSA-2404192",NA
"136","skyblue3",TRUE,0.0488647008363626,44,118,5,0.0423728813559322,0.113636363636364,"REAC:R-HSA-2404192","REAC","Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)",10588,2022,"REAC:R-HSA-9006934",NA
"137","steelblue",TRUE,0.0113465386812033,73,88,5,0.0568181818181818,0.0684931506849315,"GO:0048475","GO:CC","coated membrane",16963,2564,"GO:0016020",NA
"138","steelblue",TRUE,0.0113465386812033,73,88,5,0.0568181818181818,0.0684931506849315,"GO:0030117","GO:CC","membrane coat",16963,1076,"c(""GO:0005737"", ""GO:0048475"", ""GO:0098796"")",NA
"139","steelblue",TRUE,0.0331544694943231,126,40,5,0.125,0.0396825396825397,"KEGG:04114","KEGG","Oocyte meiosis",7747,246,"KEGG:00000",NA
"140","tan",TRUE,0.00381098397439919,12994,196,174,0.887755102040816,0.0133907957518855,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"141","tan",TRUE,0.0366860715802383,4890,188,81,0.430851063829787,0.0165644171779141,"GO:0003824","GO:MF","catalytic activity",16268,520,"GO:0003674",NA
"142","thistle1",TRUE,0.00470311559794943,49,165,6,0.0363636363636364,0.122448979591837,"GO:0003684","GO:MF","damaged DNA binding",16268,414,"GO:0003677",NA
"143","thistle1",TRUE,0.0328086351984155,33,83,4,0.0481927710843374,0.121212121212121,"KEGG:03410","KEGG","Base excision repair",7747,215,"KEGG:00000",NA
"144","thistle2",TRUE,0.00133953268293821,12994,230,203,0.882608695652174,0.0156225950438664,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"145","thistle2",TRUE,0.0129405474759006,11093,230,178,0.773913043478261,0.0160461552330298,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"146","thistle2",TRUE,0.00107652412241703,3,232,3,0.0129310344827586,1,"GO:0019797","GO:MF","procollagen-proline 3-dioxygenase activity",16268,4614,"c(""GO:0019798"", ""GO:0031544"")",NA
"147","thistle2",TRUE,0.00426062633460505,4,232,3,0.0129310344827586,0.75,"GO:0031544","GO:MF","peptidyl-proline 3-dioxygenase activity",16268,5134,"GO:0031543",NA
"148","yellow4",TRUE,0.0055343440926393,9937,208,151,0.725961538461538,0.0151957331186475,"GO:0005737","GO:CC","cytoplasm",16963,402,"c(""GO:0005622"", ""GO:0110165"")",NA
"149","yellow4",TRUE,0.00905485733596725,4850,208,87,0.418269230769231,0.0179381443298969,"GO:0005829","GO:CC","cytosol",16963,487,"c(""GO:0005737"", ""GO:0110165"")",NA
"150","yellow4",TRUE,0.0169998682093607,12994,208,182,0.875,0.0140064645220871,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"151","yellow4",TRUE,0.0237423550760287,11572,209,173,0.827751196172249,0.0149498790183201,"GO:0005515","GO:MF","protein binding",16268,1897,"GO:0005488",NA
"152","yellowgreen",TRUE,0.0154244035027446,9269,225,162,0.72,0.0174776135505448,"GO:0044237","GO:BP","cellular metabolic process",15979,12812,"c(""GO:0008152"", ""GO:0009987"")",NA
"153","yellowgreen",TRUE,0.002803676836537,1291,229,37,0.161572052401747,0.0286599535243997,"GO:1902494","GO:CC","catalytic complex",16963,3994,"GO:0032991",NA
"154","yellowgreen",TRUE,0.00515983637411196,4723,229,93,0.406113537117904,0.0196908744442092,"GO:0032991","GO:CC","protein-containing complex",16963,1590,"GO:0005575",NA
"155","yellowgreen",TRUE,0.0153692486927194,4890,234,99,0.423076923076923,0.0202453987730061,"GO:0003824","GO:MF","catalytic activity",16268,520,"GO:0003674",NA
"156","yellowgreen",TRUE,0.0268929049922614,11572,234,192,0.82051282051282,0.0165917732457656,"GO:0005515","GO:MF","protein binding",16268,1897,"GO:0005488",NA
"157","yellowgreen",TRUE,0.0439714330824532,54,234,6,0.0256410256410256,0.111111111111111,"GO:0004402","GO:MF","histone acetyltransferase activity",16268,1026,"GO:0061733",NA


"row_id","blast","patient_id","patient_code","blast2","blast_ssam_se_id","accession_id","seq_name","subtype","country","sampling_year","days_from_first_sample","fiebig_stage","days_from_treatment_end","days_from_treatment_start","days_from_infection","days_from_seroconversion","genomic_region","seq_length","organism","pos","ncbi_url","pos_ini","pos_end","sampling.dates"
1,"Blast",31107,"221F","Blast",271494,"FJ186485","ZM221F07MAR03PB_101","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,855,"HIV-1","6625:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186485?report=graph&log$=seqview",6625,7478,"07-Mar-2003"
2,"Blast",31107,"221F","Blast",271493,"FJ186486","ZM221F07MAR03PB_103","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,894,"HIV-1","6581:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186486?report=graph&log$=seqview",6581,7478,"07-Mar-2003"
3,"Blast",31107,"221F","Blast",271492,"FJ186487","ZM221F07MAR03PB_2","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,924,"HIV-1","6560:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186487?report=graph&log$=seqview",6560,7478,"07-Mar-2003"
4,"Blast",31107,"221F","Blast",271491,"FJ186488","ZM221F07MAR03PB_28","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,819,"HIV-1","6639:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186488?report=graph&log$=seqview",6639,7478,"07-Mar-2003"
5,"Blast",31107,"221F","Blast",271490,"FJ186489","ZM221F07MAR03PB_29","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6560:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186489?report=graph&log$=seqview",6560,7478,"07-Mar-2003"
6,"Blast",31107,"221F","Blast",271489,"FJ186490","ZM221F07MAR03PB_34","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,897,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186490?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
7,"Blast",31107,"221F","Blast",271488,"FJ186491","ZM221F07MAR03PB_35","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186491?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
8,"Blast",31107,"221F","Blast",271487,"FJ186492","ZM221F07MAR03PB_37","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6581:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186492?report=graph&log$=seqview",6581,7478,"07-Mar-2003"
9,"Blast",31107,"221F","Blast",271486,"FJ186493","ZM221F07MAR03PB_4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,855,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186493?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
10,"Blast",31107,"221F","Blast",271485,"FJ186494","ZM221F07MAR03PB_41","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,855,"HIV-1","6625:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186494?report=graph&log$=seqview",6625,7478,"07-Mar-2003"
11,"Blast",31107,"221F","Blast",271484,"FJ186495","ZM221F07MAR03PB_43","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,870,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186495?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
12,"Blast",31107,"221F","Blast",271483,"FJ186496","ZM221F07MAR03PB_45","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186496?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
13,"Blast",31107,"221F","Blast",271482,"FJ186497","ZM221F07MAR03PB_46","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186497?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
14,"Blast",31107,"221F","Blast",271481,"FJ186498","ZM221F07MAR03PB_47","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186498?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
15,"Blast",31107,"221F","Blast",271480,"FJ186499","ZM221F07MAR03PB_58","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,867,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186499?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
16,"Blast",31107,"221F","Blast",271479,"FJ186500","ZM221F07MAR03PB_6","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,837,"HIV-1","6645:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186500?report=graph&log$=seqview",6645,7478,"07-Mar-2003"
17,"Blast",31107,"221F","Blast",271478,"FJ186501","ZM221F07MAR03PB_67","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186501?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
18,"Blast",31107,"221F","Blast",271477,"FJ186502","ZM221F07MAR03PB_84","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,873,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186502?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
19,"Blast",31107,"221F","Blast",271476,"FJ186503","ZM221F07MAR03PB_87","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,879,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186503?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
20,"Blast",31107,"221F","Blast",271475,"FJ186504","ZM221F07MAR03PB_91","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,870,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186504?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
21,"Blast",31107,"221F","Blast",271474,"FJ186505","ZM221F07MAR03PB_95","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,822,"HIV-1","6656:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186505?report=graph&log$=seqview",6656,7478,"07-Mar-2003"
22,"Blast",31107,"221F","Blast",271473,"FJ186506","ZM221F07MAR03PL_1","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,897,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186506?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
23,"Blast",31107,"221F","Blast",271472,"FJ186507","ZM221F07MAR03PL_14","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,924,"HIV-1","6560:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186507?report=graph&log$=seqview",6560,7478,"07-Mar-2003"
24,"Blast",31107,"221F","Blast",271471,"FJ186508","ZM221F07MAR03PL_33","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,870,"HIV-1","6606:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186508?report=graph&log$=seqview",6606,7478,"07-Mar-2003"
25,"Blast",31107,"221F","Blast",271470,"FJ186509","ZM221F07MAR03PL_35","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186509?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
26,"Blast",31107,"221F","Blast",271469,"FJ186510","ZM221F07MAR03PL_42","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,924,"HIV-1","6560:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186510?report=graph&log$=seqview",6560,7478,"07-Mar-2003"
27,"Blast",31107,"221F","Blast",271468,"FJ186511","ZM221F07MAR03PL_44","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,852,"HIV-1","6615:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186511?report=graph&log$=seqview",6615,7478,"07-Mar-2003"
28,"Blast",31107,"221F","Blast",271467,"FJ186512","ZM221F07MAR03PL_48","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,855,"HIV-1","6625:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186512?report=graph&log$=seqview",6625,7478,"07-Mar-2003"
29,"Blast",31107,"221F","Blast",271466,"FJ186513","ZM221F07MAR03PL_51","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186513?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
30,"Blast",31107,"221F","Blast",271465,"FJ186514","ZM221F07MAR03PL_55","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6598:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186514?report=graph&log$=seqview",6598,7478,"07-Mar-2003"
31,"Blast",31107,"221F","Blast",271464,"FJ186515","ZM221F07MAR03PL_57","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,837,"HIV-1","6624:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186515?report=graph&log$=seqview",6624,7478,"07-Mar-2003"
32,"Blast",31107,"221F","Blast",271463,"FJ186516","ZM221F07MAR03PL_70","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186516?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
33,"Blast",31107,"221F","Blast",271462,"FJ186517","ZM221F07MAR03PL_71","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186517?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
34,"Blast",31107,"221F","Blast",271461,"FJ186518","ZM221F07MAR03PL_72","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186518?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
35,"Blast",31107,"221F","Blast",271460,"FJ186519","ZM221F07MAR03PL_80","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186519?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
36,"Blast",31107,"221F","Blast",271459,"FJ186520","ZM221F07MAR03PL_83","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186520?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
37,"Blast",31107,"221F","Blast",271458,"FJ186521","ZM221F07MAR03PL_9","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186521?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
38,"Blast",31107,"221F","Blast",313585,"FJ606281","ZM221F","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,1509,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/FJ606281?report=graph&log$=seqview",790,2292,"08-Mar-2003"
39,"Blast",31107,"221F","Blast",450965,"HQ858211","ZM221_F_CA_14B7","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858211?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
40,"Blast",31107,"221F","Blast",450699,"HQ858212","ZM221_F_SW_14A11","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858212?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
41,"Blast",31107,"221F","Blast",450964,"HQ858213","ZM221_F_SW_14A4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858213?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
42,"Blast",31107,"221F","Blast",450698,"HQ858214","ZM221_F_SW_14B2","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858214?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
43,"Blast",31107,"221F","Blast",450963,"HQ858215","ZM221_F_SW_14C2","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858215?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
44,"Blast",31107,"221F","Blast",450697,"HQ858216","ZM221_F_SW_14C4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858216?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
45,"Blast",31107,"221F","Blast",450962,"HQ858217","ZM221_F_SW_14C6","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858217?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
46,"Blast",31107,"221F","Blast",450696,"HQ858218","ZM221_F_SW_14D1","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858218?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
47,"Blast",31107,"221F","Blast",450961,"HQ858219","ZM221_F_SW_14D5","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,855,"HIV-1","6625:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858219?report=graph&log$=seqview",6625,7478,"08-Mar-2003"
48,"Blast",31107,"221F","Blast",450695,"HQ858220","ZM221_F_SW_14H14","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858220?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
49,"Blast",31107,"221F","Blast",450960,"HQ858221","ZM221_F_SW_14H16","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,924,"HIV-1","6560:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858221?report=graph&log$=seqview",6560,7478,"08-Mar-2003"
50,"Blast",31107,"221F","Blast",450694,"HQ858222","ZM221_F_SW_14H22","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858222?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
51,"Blast",31107,"221F","Blast",450959,"HQ858223","ZM221_F_SW_14H31","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858223?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
52,"Blast",31107,"221F","Blast",450693,"HQ858224","ZM221_F_SW_14H8","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858224?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
53,"Blast",31107,"221F","Blast",450958,"HQ858225","ZM221_F_SW_14H9","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858225?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
54,"Blast",31107,"221F","Blast",450692,"HQ858226","ZM221_F_SW_14I11","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858226?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
55,"Blast",31107,"221F","Blast",450957,"HQ858227","ZM221_F_SW_14I14","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858227?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
56,"Blast",31107,"221F","Blast",450691,"HQ858228","ZM221_F_SW_14I15","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858228?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
57,"Blast",31107,"221F","Blast",450956,"HQ858229","ZM221_F_SW_14I17","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858229?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
58,"Blast",31107,"221F","Blast",450690,"HQ858230","ZM221_F_SW_14I20","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858230?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
59,"Blast",31107,"221F","Blast",450955,"HQ858231","ZM221_F_SW_14I23","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858231?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
60,"Blast",31107,"221F","Blast",450689,"HQ858232","ZM221_F_SW_14I27","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858232?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
61,"Blast",31107,"221F","Blast",450954,"HQ858233","ZM221_F_SW_14I30","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858233?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
62,"Blast",31107,"221F","Blast",450688,"HQ858234","ZM221_F_SW_14I6","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858234?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
63,"Blast",31107,"221F","Blast",450953,"HQ858235","ZM221_F_SW_14I9","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858235?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
64,"Blast",31107,"221F","Blast",450687,"HQ858236","ZM221_F_SW_14J10","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858236?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
65,"Blast",31107,"221F","Blast",450952,"HQ858237","ZM221_F_SW_14J11","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858237?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
66,"Blast",31107,"221F","Blast",450686,"HQ858238","ZM221_F_SW_14J12","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858238?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
67,"Blast",31107,"221F","Blast",450951,"HQ858239","ZM221_F_SW_14J25","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858239?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
68,"Blast",31107,"221F","Blast",450685,"HQ858240","ZM221_F_SW_14J27","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858240?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
69,"Blast",31107,"221F","Blast",450950,"HQ858241","ZM221_F_SW_14J28","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858241?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
70,"Blast",31107,"221F","Blast",450684,"HQ858242","ZM221_F_SW_14J29","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858242?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
71,"Blast",31107,"221F","Blast",450949,"HQ858243","ZM221_F_SW_14J30","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858243?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
72,"Blast",31107,"221F","Blast",450683,"HQ858244","ZM221_F_SW_14J5","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858244?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
73,"Blast",31107,"221F","Blast",450948,"HQ858245","ZM221_F_SW_14J9","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858245?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
74,"Blast",31107,"221F","Blast",599491,"KM049513","ZM221F","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049513?report=graph&log$=seqview",8797,9417,"08-Mar-2003"
75,"Blast",31107,"221F","Blast",598604,"KM050400","ZM221F","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050400?report=graph&log$=seqview",2085,5096,"08-Mar-2003"
1,"Blast",31093,"221M","Blast",271457,"FJ186522","ZM221M07MAR03PB_2","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186522?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
2,"Blast",31093,"221M","Blast",271456,"FJ186523","ZM221M07MAR03PB_25","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186523?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
3,"Blast",31093,"221M","Blast",271455,"FJ186524","ZM221M07MAR03PB_27","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186524?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
4,"Blast",31093,"221M","Blast",271454,"FJ186525","ZM221M07MAR03PB_30","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186525?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
5,"Blast",31093,"221M","Blast",271453,"FJ186526","ZM221M07MAR03PB_31","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186526?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
6,"Blast",31093,"221M","Blast",271452,"FJ186527","ZM221M07MAR03PB_32","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186527?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
7,"Blast",31093,"221M","Blast",271451,"FJ186528","ZM221M07MAR03PB_4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186528?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
8,"Blast",31093,"221M","Blast",271450,"FJ186529","ZM221M07MAR03PB_55","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186529?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
9,"Blast",31093,"221M","Blast",271449,"FJ186530","ZM221M07MAR03PB_60","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186530?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
10,"Blast",31093,"221M","Blast",271448,"FJ186531","ZM221M07MAR03PB_64","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186531?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
11,"Blast",31093,"221M","Blast",271447,"FJ186532","ZM221M07MAR03PB_65","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186532?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
12,"Blast",31093,"221M","Blast",271446,"FJ186533","ZM221M07MAR03PB_69","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186533?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
13,"Blast",31093,"221M","Blast",271445,"FJ186534","ZM221M07MAR03PB_7","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186534?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
14,"Blast",31093,"221M","Blast",271444,"FJ186535","ZM221M07MAR03PB_70","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186535?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
15,"Blast",31093,"221M","Blast",271443,"FJ186536","ZM221M07MAR03PB_71","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186536?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
16,"Blast",31093,"221M","Blast",271442,"FJ186537","ZM221M07MAR03PB_74","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186537?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
17,"Blast",31093,"221M","Blast",271441,"FJ186538","ZM221M07MAR03PB_77","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186538?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
18,"Blast",31093,"221M","Blast",271440,"FJ186539","ZM221M07MAR03PB_78","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186539?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
19,"Blast",31093,"221M","Blast",271439,"FJ186540","ZM221M07MAR03PB_8","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186540?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
20,"Blast",31093,"221M","Blast",271438,"FJ186541","ZM221M07MAR03PB_80","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186541?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
21,"Blast",31093,"221M","Blast",271437,"FJ186542","ZM221M07MAR03PB_81","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186542?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
22,"Blast",31093,"221M","Blast",271436,"FJ186543","ZM221M07MAR03PB_82","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186543?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
23,"Blast",31093,"221M","Blast",271435,"FJ186544","ZM221M07MAR03PB_83","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186544?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
24,"Blast",31093,"221M","Blast",271434,"FJ186545","ZM221M07MAR03PB_84","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186545?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
25,"Blast",31093,"221M","Blast",271433,"FJ186546","ZM221M07MAR03PB_86","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186546?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
26,"Blast",31093,"221M","Blast",271432,"FJ186547","ZM221M07MAR03PB_87","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186547?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
27,"Blast",31093,"221M","Blast",271431,"FJ186548","ZM221M07MAR03PL_4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186548?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
28,"Blast",31093,"221M","Blast",271430,"FJ186549","ZM221M07MAR03PL_49","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186549?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
29,"Blast",31093,"221M","Blast",271429,"FJ186550","ZM221M07MAR03PL_5","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186550?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
30,"Blast",31093,"221M","Blast",271428,"FJ186551","ZM221M07MAR03PL_50","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186551?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
31,"Blast",31093,"221M","Blast",271427,"FJ186552","ZM221M07MAR03PL_52","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186552?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
32,"Blast",31093,"221M","Blast",271426,"FJ186553","ZM221M07MAR03PL_54","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186553?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
33,"Blast",31093,"221M","Blast",271425,"FJ186554","ZM221M07MAR03PL_55","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186554?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
34,"Blast",31093,"221M","Blast",271424,"FJ186555","ZM221M07MAR03PL_58","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186555?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
35,"Blast",31093,"221M","Blast",271423,"FJ186556","ZM221M07MAR03PL_59","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186556?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
36,"Blast",31093,"221M","Blast",271422,"FJ186557","ZM221M07MAR03PL_6","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186557?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
37,"Blast",31093,"221M","Blast",271421,"FJ186558","ZM221M07MAR03PL_61","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186558?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
38,"Blast",31093,"221M","Blast",271420,"FJ186559","ZM221M07MAR03PL_62","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186559?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
39,"Blast",31093,"221M","Blast",271419,"FJ186560","ZM221M07MAR03PL_64","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186560?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
40,"Blast",31093,"221M","Blast",271418,"FJ186561","ZM221M07MAR03PL_65","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186561?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
41,"Blast",31093,"221M","Blast",271417,"FJ186562","ZM221M07MAR03PL_66","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186562?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
42,"Blast",31093,"221M","Blast",271416,"FJ186563","ZM221M07MAR03PL_67","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186563?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
43,"Blast",31093,"221M","Blast",271415,"FJ186564","ZM221M07MAR03PL_68","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186564?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
44,"Blast",31093,"221M","Blast",271414,"FJ186565","ZM221M07MAR03PL_69","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186565?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
45,"Blast",31093,"221M","Blast",271413,"FJ186566","ZM221M07MAR03PL_72","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186566?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
46,"Blast",31093,"221M","Blast",271412,"FJ186567","ZM221M07MAR03PL_73","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186567?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
47,"Blast",31093,"221M","Blast",271411,"FJ186568","ZM221M07MAR03PL_74","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186568?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
48,"Blast",31093,"221M","Blast",271410,"FJ186569","ZM221M07MAR03PL_75","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186569?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
49,"Blast",31093,"221M","Blast",271409,"FJ186570","ZM221M07MAR03PL_76","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186570?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
50,"Blast",31093,"221M","Blast",271408,"FJ186571","ZM221M07MAR03PL_77","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186571?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
51,"Blast",31093,"221M","Blast",313699,"FJ606167","ZM1221M","C","ZAMBIA",2005,NA,NA,NA,NA,NA,NA,NA,1476,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/FJ606167?report=graph&log$=seqview",790,2292,"13-Sep-2005"
52,"Blast",31093,"221M","Blast",313584,"FJ606282","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,1509,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/FJ606282?report=graph&log$=seqview",790,2292,"07-Mar-2003"
53,"Blast",31093,"221M","Blast",356180,"HM068598","Z221MPL7MAR03ENV2_1","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,2592,"HIV-1","6225:8795","http://www.ncbi.nlm.nih.gov/nuccore/HM068598?report=graph&log$=seqview",6225,8795,NA
54,"Blast",31093,"221M","Blast",356179,"HM068599","Z221MPL26FEB05ENV3_1","C","ZAMBIA",2005,NA,NA,NA,NA,NA,731,NA,2580,"HIV-1","6225:8795","http://www.ncbi.nlm.nih.gov/nuccore/HM068599?report=graph&log$=seqview",6225,8795,NA
55,"Blast",31093,"221M","Blast",450682,"HQ858246","ZM221_M_CA_1","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858246?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
56,"Blast",31093,"221M","Blast",450947,"HQ858247","ZM221_M_CA_10","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858247?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
57,"Blast",31093,"221M","Blast",450681,"HQ858248","ZM221_M_CA_14","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858248?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
58,"Blast",31093,"221M","Blast",450946,"HQ858249","ZM221_M_CA_2","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858249?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
59,"Blast",31093,"221M","Blast",450680,"HQ858250","ZM221_M_CA_20","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858250?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
60,"Blast",31093,"221M","Blast",450945,"HQ858251","ZM221_M_CA_21","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858251?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
61,"Blast",31093,"221M","Blast",450679,"HQ858252","ZM221_M_CA_23","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858252?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
62,"Blast",31093,"221M","Blast",450944,"HQ858253","ZM221_M_CF_1","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858253?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
63,"Blast",31093,"221M","Blast",450678,"HQ858254","ZM221_M_CF_11","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858254?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
64,"Blast",31093,"221M","Blast",450943,"HQ858255","ZM221_M_CF_14","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858255?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
65,"Blast",31093,"221M","Blast",450677,"HQ858256","ZM221_M_CF_15","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858256?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
66,"Blast",31093,"221M","Blast",450942,"HQ858257","ZM221_M_CF_19","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858257?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
67,"Blast",31093,"221M","Blast",450676,"HQ858258","ZM221_M_CF_20","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858258?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
68,"Blast",31093,"221M","Blast",450941,"HQ858259","ZM221_M_CF_21","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858259?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
69,"Blast",31093,"221M","Blast",450675,"HQ858260","ZM221_M_CF_21A","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858260?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
70,"Blast",31093,"221M","Blast",450940,"HQ858261","ZM221_M_CF_24","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858261?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
71,"Blast",31093,"221M","Blast",450674,"HQ858262","ZM221_M_CF_24A","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858262?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
72,"Blast",31093,"221M","Blast",450939,"HQ858263","ZM221_M_CF_4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858263?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
73,"Blast",31093,"221M","Blast",450673,"HQ858264","ZM221_M_CF_6","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858264?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
74,"Blast",31093,"221M","Blast",450938,"HQ858265","ZM221_M_CF_7","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858265?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
75,"Blast",31093,"221M","Blast",450672,"HQ858266","ZM221_M_CF_8","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858266?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
76,"Blast",31093,"221M","Blast",450937,"HQ858267","ZM221_M_CF_9","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858267?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
77,"Blast",31093,"221M","Blast",600233,"KM048771","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,1479,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/KM048771?report=graph&log$=seqview",790,2292,"07-Mar-2003"
78,"Blast",31093,"221M","Blast",600232,"KM048772","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,1479,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/KM048772?report=graph&log$=seqview",790,2292,"26-Aug-2003"
79,"Blast",31093,"221M","Blast",600231,"KM048773","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,1479,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/KM048773?report=graph&log$=seqview",790,2292,"28-Feb-2004"
80,"Blast",31093,"221M","Blast",600230,"KM048774","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,1479,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/KM048774?report=graph&log$=seqview",790,2292,"24-Sep-2004"
81,"Blast",31093,"221M","Blast",599814,"KM049190","ZM1221M","C","ZAMBIA",2005,NA,NA,NA,NA,NA,NA,NA,615,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049190?report=graph&log$=seqview",8797,9417,"13-Sep-2005"
82,"Blast",31093,"221M","Blast",599490,"KM049514","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049514?report=graph&log$=seqview",8797,9417,"07-Mar-2003"
83,"Blast",31093,"221M","Blast",599489,"KM049515","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049515?report=graph&log$=seqview",8797,9417,"26-Aug-2003"
84,"Blast",31093,"221M","Blast",599488,"KM049516","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049516?report=graph&log$=seqview",8797,9417,"28-Feb-2004"
85,"Blast",31093,"221M","Blast",599487,"KM049517","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049517?report=graph&log$=seqview",8797,9417,"24-Sep-2004"
86,"Blast",31093,"221M","Blast",599486,"KM049518","ZM221M","C","ZAMBIA",2005,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049518?report=graph&log$=seqview",8797,9417,"26-Feb-2005"
87,"Blast",31093,"221M","Blast",598923,"KM050081","ZM1221M","C","ZAMBIA",2005,NA,NA,NA,NA,NA,NA,NA,2997,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050081?report=graph&log$=seqview",2085,5096,"13-Sep-2005"
88,"Blast",31093,"221M","Blast",598603,"KM050401","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050401?report=graph&log$=seqview",2085,5096,"07-Mar-2003"
89,"Blast",31093,"221M","Blast",598602,"KM050402","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050402?report=graph&log$=seqview",2085,5096,"26-Aug-2003"
90,"Blast",31093,"221M","Blast",598601,"KM050403","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050403?report=graph&log$=seqview",2085,5096,"28-Feb-2004"
91,"Blast",31093,"221M","Blast",598600,"KM050404","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050404?report=graph&log$=seqview",2085,5096,"24-Sep-2004"
92,"Blast",31093,"221M","Blast",598599,"KM050405","ZM221M","C","ZAMBIA",2005,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050405?report=graph&log$=seqview",2085,5096,"26-Feb-2005"


"Source Name","Sample Name","Comment: Original Submitted Sample Name","Protocol REF","Characteristics: Organism","Factor Value: ecotype","Factor Value: Space Flight","Material Type","Parameter Value: duration","Parameter Value: Activation time","Factor Value: light","Parameter Value: Age at harvest","Parameter Value: Sample Storage Method","Parameter Value: Sample Preservation Method",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_Alight_Rep1_GSM2493759","GSM2493759","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_Alight_Rep2_GSM2493760","GSM2493760","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_Alight_Rep3_GSM2493761","GSM2493761","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_dark_Rep1_GSM2493768","GSM2493768","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_dark_Rep2_GSM2493769","GSM2493769","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_dark_Rep3_GSM2493770","GSM2493770","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_Alight_Rep1_GSM2493762","GSM2493762","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_Alight_Rep2_GSM2493763","GSM2493763","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_Alight_Rep3_GSM2493764","GSM2493764","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_dark_Rep1_GSM2493771","GSM2493771","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_dark_Rep2_GSM2493772","GSM2493772","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_dark_Rep3_GSM2493773","GSM2493773","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_Alight_Rep1_GSM2493765","GSM2493765","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_Alight_Rep2_GSM2493766","GSM2493766","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_Alight_Rep3_GSM2493767","GSM2493767","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_dark_Rep1_GSM2493774","GSM2493774","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_dark_Rep2_GSM2493775","GSM2493775","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_dark_Rep3_GSM2493776","GSM2493776","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_Alight_Rep1_GSM2493777","GSM2493777 ","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_Alight_Rep2_GSM2493778","GSM2493778","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_Alight_Rep3_GSM2493779","GSM2493779","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_dark_Rep1_GSM2493786","GSM2493786","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_dark_Rep2_GSM2493787","GSM2493787","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_dark_Rep3_GSM2493788","GSM2493788","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_Alight_Rep1_GSM2493780","GSM2493780","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_Alight_Rep2_GSM2493781","GSM2493781","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_Alight_Rep3_GSM2493782","GSM2493782","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_dark_Rep1_GSM2493789","GSM2493789","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_dark_Rep2_GSM2493790","GSM2493790","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_dark_Rep3_GSM2493791","GSM2493791","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_Alight_Rep1_GSM2493783","GSM2493783","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_Alight_Rep2_GSM2493784","GSM2493784","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_Alight_Rep3_GSM2493785","GSM2493785","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_dark_Rep1_GSM2493792","GSM2493792","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_dark_Rep2_GSM2493793","GSM2493793","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_dark_Rep3_GSM2493794","GSM2493794","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",



"","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","geneID","Count"
"GO:0071495","GO:0071495","cellular response to endogenous stimulus","4/14","230/11267",0.000144168599240464,0.052189032925048,0.0140922830966819,"ImpL2/sty/Sesn/Pi3K21B",4
"GO:0071417","GO:0071417","cellular response to organonitrogen compound","3/14","92/11267",0.000179687023153859,0.065046702381697,0.0140922830966819,"ImpL2/Sesn/Pi3K21B",3
"GO:1901699","GO:1901699","cellular response to nitrogen compound","3/14","97/11267",0.000210192604316164,0.0760897227624514,0.0140922830966819,"ImpL2/Sesn/Pi3K21B",3
"GO:0009719","GO:0009719","response to endogenous stimulus","4/14","262/11267",0.000238003003410628,0.0861570872346472,0.0140922830966819,"ImpL2/sty/Sesn/Pi3K21B",4
"GO:1902532","GO:1902532","negative regulation of intracellular signal transduction","3/14","119/11267",0.000384104665425247,0.139045888883939,0.014399637055493,"ImpL2/sty/Sesn",3
"GO:0071310","GO:0071310","cellular response to organic substance","4/14","308/11267",0.000441274746226886,0.159741458134133,0.014399637055493,"ImpL2/sty/Sesn/Pi3K21B",4
"GO:0009968","GO:0009968","negative regulation of signal transduction","4/14","327/11267",0.000553667890133797,0.200427776228435,0.014399637055493,"ImpL2/sty/Sesn/chrb",4
"GO:0007623","GO:0007623","circadian rhythm","3/14","146/11267",0.00069871994137245,0.252936618776827,0.014399637055493,"cwo/Irk1/B4",3
"GO:0010648","GO:0010648","negative regulation of cell communication","4/14","348/11267",0.000700301904635231,0.253509289477954,0.014399637055493,"ImpL2/sty/Sesn/chrb",4
"GO:0023057","GO:0023057","negative regulation of signaling","4/14","349/11267",0.000707910635182445,0.256263649936045,0.014399637055493,"ImpL2/sty/Sesn/chrb",4
"GO:0048511","GO:0048511","rhythmic process","3/14","148/11267",0.000726964767218801,0.263161245733206,0.014399637055493,"cwo/Irk1/B4",3
"GO:1901701","GO:1901701","cellular response to oxygen-containing compound","3/14","151/11267",0.000770687629235254,0.278988921783162,0.014399637055493,"ImpL2/Sesn/Pi3K21B",3
"GO:1902531","GO:1902531","regulation of intracellular signal transduction","4/14","364/11267",0.000829263143682283,0.300193258012986,0.014399637055493,"ImpL2/sty/Sesn/chrb",4
"GO:0010243","GO:0010243","response to organonitrogen compound","3/14","159/11267",0.000895414346250987,0.324139993342857,0.014399637055493,"ImpL2/Sesn/Pi3K21B",3
"GO:0010259","GO:0010259","multicellular organism aging","3/14","165/11267",0.000996942293995659,0.360893110426428,0.014399637055493,"ImpL2/Sesn/Pcyt1",3
"GO:1901698","GO:1901698","response to nitrogen compound","3/14","165/11267",0.000996942293995659,0.360893110426428,0.014399637055493,"ImpL2/Sesn/Pi3K21B",3
"GO:0007568","GO:0007568","aging","3/14","170/11267",0.00108693371303202,0.393470004117592,0.014399637055493,"ImpL2/Sesn/Pcyt1",3
"GO:0048585","GO:0048585","negative regulation of response to stimulus","4/14","392/11267",0.00109437241621747,0.396162814670723,0.014399637055493,"ImpL2/sty/Sesn/chrb",4
"GO:0007169","GO:0007169","transmembrane receptor protein tyrosine kinase signaling pathway","3/14","178/11267",0.0012413933323905,0.449384386325363,0.0151804604970626,"ImpL2/sty/Pi3K21B",3
"GO:0070887","GO:0070887","cellular response to chemical stimulus","4/14","409/11267",0.00128190555308528,0.464049810216873,0.0151804604970626,"ImpL2/sty/Sesn/Pi3K21B",4
"GO:0008286","GO:0008286","insulin receptor signaling pathway","2/14","59/11267",0.00235596267551639,0.852858488536932,0.0265710076186059,"ImpL2/Pi3K21B",2
"GO:0042067","GO:0042067","establishment of ommatidial planar polarity","2/14","61/11267",0.00251624687463364,0.910881368617379,0.0270887821431852,"sty/Pcyt1",2
"GO:0032006","GO:0032006","regulation of TOR signaling","2/14","63/11267",0.00268156417084419,0.970726229845597,0.0276133610269997,"Sesn/chrb",2
"GO:0031929","GO:0031929","TOR signaling","2/14","71/11267",0.00339271838562471,1,0.0311686434556701,"Sesn/chrb",2
"GO:0032869","GO:0032869","cellular response to insulin stimulus","2/14","72/11267",0.00348717896322735,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:0071375","GO:0071375","cellular response to peptide hormone stimulus","2/14","74/11267",0.00367978062336274,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:1901653","GO:1901653","cellular response to peptide","2/14","74/11267",0.00367978062336274,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:0007167","GO:0007167","enzyme linked receptor protein signaling pathway","3/14","262/11267",0.0037417183088027,1,0.0311686434556701,"ImpL2/sty/Pi3K21B",3
"GO:0032868","GO:0032868","response to insulin","2/14","76/11267",0.00387727131132268,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:0043434","GO:0043434","response to peptide hormone","2/14","78/11267",0.0040796291100866,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:1901652","GO:1901652","response to peptide","2/14","78/11267",0.0040796291100866,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:0001558","GO:0001558","regulation of cell growth","2/14","80/11267",0.00428683216818146,1,0.0317281986131852,"Orct2/Sesn",2
"GO:0043549","GO:0043549","regulation of kinase activity","2/14","94/11267",0.0058710990048309,1,0.0410040611733447,"sty/Pi3K21B",2
"GO:0040008","GO:0040008","regulation of growth","3/14","308/11267",0.00588636078177348,1,0.0410040611733447,"Orct2/Sesn/chrb",3
"GO:0006650","GO:0006650","glycerophospholipid metabolic process","2/14","103/11267",0.00701092904709403,1,0.0474423770104107,"Pi3K21B/Pcyt1",2
"GO:0001736","GO:0001736","establishment of planar polarity","2/14","108/11267",0.0076843450476598,1,0.0483500946113679,"sty/Pcyt1",2
"GO:0007164","GO:0007164","establishment of tissue polarity","2/14","108/11267",0.0076843450476598,1,0.0483500946113679,"sty/Pcyt1",2
"GO:0045926","GO:0045926","negative regulation of growth","2/14","109/11267",0.00782243262729355,1,0.0483500946113679,"Sesn/chrb",2
"GO:0051338","GO:0051338","regulation of transferase activity","2/14","110/11267",0.00796164891267191,1,0.0483500946113679,"sty/Pi3K21B",2
"GO:1901700","GO:1901700","response to oxygen-containing compound","3/14","350/11267",0.00838415507414025,1,0.0496430234653041,"ImpL2/Sesn/Pi3K21B",3
"GO:0001738","GO:0001738","morphogenesis of a polarized epithelium","2/14","119/11267",0.00926495936733064,1,0.0535203044325904,"sty/Pcyt1",2
"GO:0032870","GO:0032870","cellular response to hormone stimulus","2/14","122/11267",0.00971934054202051,1,0.0548083113271833,"ImpL2/Pi3K21B",2
"GO:0035220","GO:0035220","wing disc development","3/14","375/11267",0.0101295009611701,1,0.0557928449513654,"sty/Irk1/Pcyt1",3
"GO:0006979","GO:0006979","response to oxidative stress","2/14","133/11267",0.0114692134158178,1,0.0575960379631344,"Sesn/chrb",2
"GO:0015695","GO:0015695","organic cation transport","1/14","10/11267",0.0123613291420243,1,0.0575960379631344,"Orct2",1
"GO:0040036","GO:0040036","regulation of fibroblast growth factor receptor signaling pathway","1/14","10/11267",0.0123613291420243,1,0.0575960379631344,"sty",1
"GO:0042594","GO:0042594","response to starvation","2/14","141/11267",0.0128231604495584,1,0.0575960379631344,"ImpL2/Sesn",2
"GO:0046486","GO:0046486","glycerolipid metabolic process","2/14","141/11267",0.0128231604495584,1,0.0575960379631344,"Pi3K21B/Pcyt1",2
"GO:0006644","GO:0006644","phospholipid metabolic process","2/14","142/11267",0.0129971432433162,1,0.0575960379631344,"Pi3K21B/Pcyt1",2
"GO:0010888","GO:0010888","negative regulation of lipid storage","1/14","11/11267",0.0135896263252887,1,0.0575960379631344,"ImpL2",1
"GO:0071230","GO:0071230","cellular response to amino acid stimulus","1/14","11/11267",0.0135896263252887,1,0.0575960379631344,"Sesn",1
"GO:0071901","GO:0071901","negative regulation of protein serine/threonine kinase activity","1/14","11/11267",0.0135896263252887,1,0.0575960379631344,"sty",1
"GO:1905953","GO:1905953","negative regulation of lipid localization","1/14","11/11267",0.0135896263252887,1,0.0575960379631344,"ImpL2",1
"GO:0016049","GO:0016049","cell growth","2/14","151/11267",0.0146097138536656,1,0.0575960379631344,"Orct2/Sesn",2
"GO:0045314","GO:0045314","regulation of compound eye photoreceptor development","1/14","12/11267",0.0148165048995114,1,0.0575960379631344,"sty",1
"GO:1902882","GO:1902882","regulation of response to oxidative stress","1/14","12/11267",0.0148165048995114,1,0.0575960379631344,"Sesn",1
"GO:0009725","GO:0009725","response to hormone","2/14","154/11267",0.0151657359480122,1,0.0575960379631344,"ImpL2/Pi3K21B",2
"GO:0040007","GO:0040007","growth","3/14","437/11267",0.0153304380781681,1,0.0575960379631344,"Orct2/Sesn/chrb",3
"GO:0042478","GO:0042478","regulation of eye photoreceptor cell development","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"sty",1
"GO:0046628","GO:0046628","positive regulation of insulin receptor signaling pathway","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"ImpL2",1
"GO:0048581","GO:0048581","negative regulation of post-embryonic development","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"sty",1
"GO:0048747","GO:0048747","muscle fiber development","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"sty",1
"GO:1900078","GO:1900078","positive regulation of cellular response to insulin stimulus","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"ImpL2",1
"GO:2000377","GO:2000377","regulation of reactive oxygen species metabolic process","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"Sesn",1
"GO:0031667","GO:0031667","response to nutrient levels","2/14","161/11267",0.016498549818279,1,0.0575960379631344,"ImpL2/Sesn",2
"GO:0008340","GO:0008340","determination of adult lifespan","2/14","162/11267",0.0166929653417545,1,0.0575960379631344,"ImpL2/Pcyt1",2
"GO:0009991","GO:0009991","response to extracellular stimulus","2/14","163/11267",0.0168883770258819,1,0.0575960379631344,"ImpL2/Sesn",2
"GO:0014066","GO:0014066","regulation of phosphatidylinositol 3-kinase signaling","1/14","14/11267",0.0172660122693929,1,0.0575960379631344,"ImpL2",1
"GO:0034198","GO:0034198","cellular response to amino acid starvation","1/14","14/11267",0.0172660122693929,1,0.0575960379631344,"Sesn",1
"GO:0043200","GO:0043200","response to amino acid","1/14","14/11267",0.0172660122693929,1,0.0575960379631344,"Sesn",1
"GO:1904262","GO:1904262","negative regulation of TORC1 signaling","1/14","14/11267",0.0172660122693929,1,0.0575960379631344,"Sesn",1
"GO:0008069","GO:0008069","dorsal/ventral axis specification, ovarian follicular epithelium","1/14","15/11267",0.0184886440856397,1,0.0598234825985515,"sty",1
"GO:1990928","GO:1990928","response to amino acid starvation","1/14","15/11267",0.0184886440856397,1,0.0598234825985515,"Sesn",1
"GO:0001700","GO:0001700","embryonic development via the syncytial blastoderm","2/14","172/11267",0.0186915147852363,1,0.0598234825985515,"Orct2/chrb",2
"GO:0016239","GO:0016239","positive regulation of macroautophagy","1/14","16/11267",0.0197098633340222,1,0.060625006837389,"Sesn",1
"GO:0046580","GO:0046580","negative regulation of Ras protein signal transduction","1/14","16/11267",0.0197098633340222,1,0.060625006837389,"sty",1
"GO:0071229","GO:0071229","cellular response to acid chemical","1/14","16/11267",0.0197098633340222,1,0.060625006837389,"Sesn",1
"GO:0051058","GO:0051058","negative regulation of small GTPase mediated signal transduction","1/14","17/11267",0.0209296715211456,1,0.0635516341735189,"sty",1
"GO:0014065","GO:0014065","phosphatidylinositol 3-kinase signaling","1/14","18/11267",0.0221480701521418,1,0.0655699445293672,"ImpL2",1
"GO:0035171","GO:0035171","lamellocyte differentiation","1/14","18/11267",0.0221480701521418,1,0.0655699445293672,"sty",1
"GO:0030308","GO:0030308","negative regulation of cell growth","1/14","19/11267",0.0233650607306704,1,0.0668502409730968,"Sesn",1
"GO:0070593","GO:0070593","dendrite self-avoidance","1/14","19/11267",0.0233650607306704,1,0.0668502409730968,"ImpL2",1
"GO:0009792","GO:0009792","embryo development ending in birth or egg hatching","2/14","194/11267",0.0234272955587941,1,0.0668502409730968,"Orct2/chrb",2
"GO:0007390","GO:0007390","germ-band shortening","1/14","21/11267",0.0257948237376161,1,0.0710383762663846,"Orct2",1
"GO:0048015","GO:0048015","phosphatidylinositol-mediated signaling","1/14","21/11267",0.0257948237376161,1,0.0710383762663846,"ImpL2",1
"GO:0048017","GO:0048017","inositol lipid-mediated signaling","1/14","21/11267",0.0257948237376161,1,0.0710383762663846,"ImpL2",1
"GO:0046627","GO:0046627","negative regulation of insulin receptor signaling pathway","1/14","22/11267",0.0270075991660059,1,0.0726043059906701,"ImpL2",1
"GO:1900077","GO:1900077","negative regulation of cellular response to insulin stimulus","1/14","22/11267",0.0270075991660059,1,0.0726043059906701,"ImpL2",1
"GO:0007163","GO:0007163","establishment or maintenance of cell polarity","2/14","214/11267",0.0281201488440231,1,0.0726043059906701,"sty/Pcyt1",2
"GO:0006469","GO:0006469","negative regulation of protein kinase activity","1/14","23/11267",0.0282189725418773,1,0.0726043059906701,"sty",1
"GO:0046854","GO:0046854","phosphatidylinositol phosphorylation","1/14","23/11267",0.0282189725418773,1,0.0726043059906701,"Pi3K21B",1
"GO:1905330","GO:1905330","regulation of morphogenesis of an epithelium","1/14","23/11267",0.0282189725418773,1,0.0726043059906701,"sty",1
"GO:0032007","GO:0032007","negative regulation of TOR signaling","1/14","24/11267",0.0294289453615516,1,0.0726043059906701,"Sesn",1
"GO:0033673","GO:0033673","negative regulation of kinase activity","1/14","24/11267",0.0294289453615516,1,0.0726043059906701,"sty",1
"GO:0048580","GO:0048580","regulation of post-embryonic development","1/14","24/11267",0.0294289453615516,1,0.0726043059906701,"sty",1
"GO:0090288","GO:0090288","negative regulation of cellular response to growth factor stimulus","1/14","24/11267",0.0294289453615516,1,0.0726043059906701,"sty",1
"GO:0018108","GO:0018108","peptidyl-tyrosine phosphorylation","1/14","25/11267",0.0306375191198847,1,0.074105477204461,"Ptpmeg2",1
"GO:0018212","GO:0018212","peptidyl-tyrosine modification","1/14","26/11267",0.0318446953102706,1,0.074105477204461,"Ptpmeg2",1
"GO:0051348","GO:0051348","negative regulation of transferase activity","1/14","26/11267",0.0318446953102706,1,0.074105477204461,"sty",1
"GO:0001101","GO:0001101","response to acid chemical","1/14","27/11267",0.0330504754246426,1,0.074105477204461,"Sesn",1
"GO:0016241","GO:0016241","regulation of macroautophagy","1/14","27/11267",0.0330504754246426,1,0.074105477204461,"Sesn",1
"GO:0040018","GO:0040018","positive regulation of multicellular organism growth","1/14","27/11267",0.0330504754246426,1,0.074105477204461,"Orct2",1
"GO:0042387","GO:0042387","plasmatocyte differentiation","1/14","27/11267",0.0330504754246426,1,0.074105477204461,"sty",1
"GO:0043405","GO:0043405","regulation of MAP kinase activity","1/14","27/11267",0.0330504754246426,1,0.074105477204461,"sty",1
"GO:0000302","GO:0000302","response to reactive oxygen species","1/14","28/11267",0.034254860953473,1,0.074105477204461,"Sesn",1
"GO:0008293","GO:0008293","torso signaling pathway","1/14","28/11267",0.034254860953473,1,0.074105477204461,"sty",1
"GO:0035168","GO:0035168","larval lymph gland hemocyte differentiation","1/14","28/11267",0.034254860953473,1,0.074105477204461,"sty",1
"GO:0046834","GO:0046834","lipid phosphorylation","1/14","28/11267",0.034254860953473,1,0.074105477204461,"Pi3K21B",1
"GO:0048598","GO:0048598","embryonic morphogenesis","2/14","239/11267",0.0344770870397404,1,0.074105477204461,"Orct2/chrb",2
"GO:0042325","GO:0042325","regulation of phosphorylation","2/14","240/11267",0.0347422729428165,1,0.074105477204461,"sty/Pi3K21B",2
"GO:0016334","GO:0016334","establishment or maintenance of polarity of follicular epithelium","1/14","29/11267",0.0354578533857762,1,0.074105477204461,"sty",1
"GO:0042059","GO:0042059","negative regulation of epidermal growth factor receptor signaling pathway","1/14","29/11267",0.0354578533857762,1,0.074105477204461,"sty",1
"GO:1901185","GO:1901185","negative regulation of ERBB signaling pathway","1/14","29/11267",0.0354578533857762,1,0.074105477204461,"sty",1
"GO:0000422","GO:0000422","autophagy of mitochondrion","1/14","30/11267",0.0366594542091078,1,0.074105477204461,"Sesn",1
"GO:0016318","GO:0016318","ommatidial rotation","1/14","30/11267",0.0366594542091078,1,0.074105477204461,"sty",1
"GO:0061726","GO:0061726","mitochondrion disassembly","1/14","30/11267",0.0366594542091078,1,0.074105477204461,"Sesn",1
"GO:0008543","GO:0008543","fibroblast growth factor receptor signaling pathway","1/14","31/11267",0.0378596649095679,1,0.074105477204461,"sty",1
"GO:0010508","GO:0010508","positive regulation of autophagy","1/14","31/11267",0.0378596649095679,1,0.074105477204461,"Sesn",1
"GO:0044344","GO:0044344","cellular response to fibroblast growth factor stimulus","1/14","31/11267",0.0378596649095679,1,0.074105477204461,"sty",1
"GO:0071774","GO:0071774","response to fibroblast growth factor","1/14","31/11267",0.0378596649095679,1,0.074105477204461,"sty",1
"GO:0110111","GO:0110111","negative regulation of animal organ morphogenesis","1/14","31/11267",0.0378596649095679,1,0.074105477204461,"sty",1
"GO:0050767","GO:0050767","regulation of neurogenesis","2/14","253/11267",0.0382635188799991,1,0.0742820685763572,"sty/cwo",2
"GO:0021782","GO:0021782","glial cell development","1/14","35/11267",0.0426466361538071,1,0.079531646370548,"sty",1
"GO:0043409","GO:0043409","negative regulation of MAPK cascade","1/14","35/11267",0.0426466361538071,1,0.079531646370548,"sty",1
"GO:0046626","GO:0046626","regulation of insulin receptor signaling pathway","1/14","35/11267",0.0426466361538071,1,0.079531646370548,"ImpL2",1
"GO:0110116","GO:0110116","regulation of compound eye photoreceptor cell differentiation","1/14","35/11267",0.0426466361538071,1,0.079531646370548,"sty",1
"GO:1900076","GO:1900076","regulation of cellular response to insulin stimulus","1/14","35/11267",0.0426466361538071,1,0.079531646370548,"ImpL2",1
"GO:0007476","GO:0007476","imaginal disc-derived wing morphogenesis","2/14","270/11267",0.043069598327523,1,0.0796929245369463,"sty/Pcyt1",2
"GO:1903008","GO:1903008","organelle disassembly","1/14","37/11267",0.0450318195704926,1,0.0816969890213095,"Sesn",1
"GO:0019220","GO:0019220","regulation of phosphate metabolic process","2/14","279/11267",0.0457032571024999,1,0.0816969890213095,"sty/Pi3K21B",2
"GO:0051174","GO:0051174","regulation of phosphorus metabolic process","2/14","279/11267",0.0457032571024999,1,0.0816969890213095,"sty/Pi3K21B",2
"GO:0007472","GO:0007472","wing disc morphogenesis","2/14","280/11267",0.0459996093773915,1,0.0816969890213095,"sty/Pcyt1",2
"GO:0008258","GO:0008258","head involution","1/14","38/11267",0.046222340899612,1,0.0816969890213095,"chrb",1
"GO:0072593","GO:0072593","reactive oxygen species metabolic process","1/14","38/11267",0.046222340899612,1,0.0816969890213095,"Sesn",1
"GO:1903432","GO:1903432","regulation of TORC1 signaling","1/14","40/11267",0.0485992501718929,1,0.0852618424068297,"Sesn",1
"GO:0010001","GO:0010001","glial cell differentiation","1/14","41/11267",0.0497856410597163,1,0.0860681462807235,"sty",1
"GO:0010883","GO:0010883","regulation of lipid storage","1/14","41/11267",0.0497856410597163,1,0.0860681462807235,"ImpL2",1
"GO:0001745","GO:0001745","compound eye morphogenesis","2/14","300/11267",0.052078867333788,1,0.0869882735741494,"sty/Pcyt1",2
"GO:0042058","GO:0042058","regulation of epidermal growth factor receptor signaling pathway","1/14","43/11267",0.0521543026895678,1,0.0869882735741494,"sty",1
"GO:0070372","GO:0070372","regulation of ERK1 and ERK2 cascade","1/14","43/11267",0.0521543026895678,1,0.0869882735741494,"sty",1
"GO:1901184","GO:1901184","regulation of ERBB signaling pathway","1/14","43/11267",0.0521543026895678,1,0.0869882735741494,"sty",1
"GO:1901607","GO:1901607","alpha-amino acid biosynthetic process","1/14","43/11267",0.0521543026895678,1,0.0869882735741494,"CG1673",1
"GO:0038202","GO:0038202","TORC1 signaling","1/14","44/11267",0.0533365763676098,1,0.087470382426654,"Sesn",1
"GO:0046532","GO:0046532","regulation of photoreceptor cell differentiation","1/14","44/11267",0.0533365763676098,1,0.087470382426654,"sty",1
"GO:0030307","GO:0030307","positive regulation of cell growth","1/14","45/11267",0.0545174805760084,1,0.087470382426654,"Orct2",1
"GO:0007156","GO:0007156","homophilic cell adhesion via plasma membrane adhesion molecules","1/14","46/11267",0.055697016779175,1,0.087470382426654,"ImpL2",1
"GO:0070371","GO:0070371","ERK1 and ERK2 cascade","1/14","46/11267",0.055697016779175,1,0.087470382426654,"sty",1
"GO:0048592","GO:0048592","eye morphogenesis","2/14","313/11267",0.0561811080665412,1,0.087470382426654,"sty/Pcyt1",2
"GO:0090596","GO:0090596","sensory organ morphogenesis","2/14","313/11267",0.0561811080665412,1,0.087470382426654,"sty/Pcyt1",2
"GO:0008652","GO:0008652","cellular amino acid biosynthetic process","1/14","47/11267",0.0568751864400866,1,0.087470382426654,"CG1673",1
"GO:0019216","GO:0019216","regulation of lipid metabolic process","1/14","47/11267",0.0568751864400866,1,0.087470382426654,"Pi3K21B",1
"GO:0040014","GO:0040014","regulation of multicellular organism growth","1/14","47/11267",0.0568751864400866,1,0.087470382426654,"Orct2",1
"GO:0097164","GO:0097164","ammonium ion metabolic process","1/14","47/11267",0.0568751864400866,1,0.087470382426654,"Pcyt1",1
"GO:1905952","GO:1905952","regulation of lipid localization","1/14","47/11267",0.0568751864400866,1,0.087470382426654,"ImpL2",1
"GO:0035120","GO:0035120","post-embryonic appendage morphogenesis","2/14","317/11267",0.0574664197136079,1,0.0878094698510138,"sty/Pcyt1",2
"GO:0006812","GO:0006812","cation transport","2/14","323/11267",0.0594143201217026,1,0.0894685275807134,"Orct2/Irk1",2
"GO:0030707","GO:0030707","ovarian follicle cell development","2/14","324/11267",0.059741271659064,1,0.0894685275807134,"sty/Ptpmeg2",2
"GO:0002066","GO:0002066","columnar/cuboidal epithelial cell development","2/14","325/11267",0.0600688757880269,1,0.0894685275807134,"sty/Ptpmeg2",2
"GO:0035114","GO:0035114","imaginal disc-derived appendage morphogenesis","2/14","326/11267",0.0603971306512419,1,0.0894685275807134,"sty/Pcyt1",2
"GO:0035107","GO:0035107","appendage morphogenesis","2/14","329/11267",0.0613857811181092,1,0.0894685275807134,"sty/Pcyt1",2
"GO:0016333","GO:0016333","morphogenesis of follicular epithelium","1/14","51/11267",0.0615742288705488,1,0.0894685275807134,"sty",1
"GO:0035264","GO:0035264","multicellular organism growth","1/14","51/11267",0.0615742288705488,1,0.0894685275807134,"Orct2",1
"GO:0042386","GO:0042386","hemocyte differentiation","1/14","51/11267",0.0615742288705488,1,0.0894685275807134,"sty",1
"GO:0060284","GO:0060284","regulation of cell development","2/14","331/11267",0.0620481011847157,1,0.0895228740380707,"sty/cwo",2
"GO:0048737","GO:0048737","imaginal disc-derived appendage development","2/14","333/11267",0.0627129798676787,1,0.0895228740380707,"sty/Pcyt1",2
"GO:0006813","GO:0006813","potassium ion transport","1/14","52/11267",0.0627455877146833,1,0.0895228740380707,"Irk1",1
"GO:0090287","GO:0090287","regulation of cellular response to growth factor stimulus","1/14","53/11267",0.0639155887643486,1,0.0896202725294627,"sty",1
"GO:0048736","GO:0048736","appendage development","2/14","338/11267",0.0643862743105905,1,0.0896202725294627,"sty/Pcyt1",2
"GO:0002065","GO:0002065","columnar/cuboidal epithelial cell differentiation","2/14","340/11267",0.0650599928696488,1,0.0896202725294627,"sty/Ptpmeg2",2
"GO:0019915","GO:0019915","lipid storage","1/14","54/11267",0.0650842334725076,1,0.0896202725294627,"ImpL2",1
"GO:0035166","GO:0035166","post-embryonic hemopoiesis","1/14","54/11267",0.0650842334725076,1,0.0896202725294627,"sty",1
"GO:0035167","GO:0035167","larval lymph gland hemopoiesis","1/14","54/11267",0.0650842334725076,1,0.0896202725294627,"sty",1
"GO:0050790","GO:0050790","regulation of catalytic activity","2/14","344/11267",0.066414894336461,1,0.0909239502628763,"sty/Pi3K21B",2
"GO:0046474","GO:0046474","glycerophospholipid biosynthetic process","1/14","56/11267",0.0674174596690379,1,0.0917660521810861,"Pcyt1",1
"GO:0051960","GO:0051960","regulation of nervous system development","2/14","351/11267",0.0688096194796859,1,0.0931258007995749,"sty/cwo",2
"GO:0007474","GO:0007474","imaginal disc-derived wing vein specification","1/14","58/11267",0.0697452778994978,1,0.093271397415489,"sty",1
"GO:0071900","GO:0071900","regulation of protein serine/threonine kinase activity","1/14","58/11267",0.0697452778994978,1,0.093271397415489,"sty",1
"GO:0007422","GO:0007422","peripheral nervous system development","1/14","59/11267",0.0709071626447392,1,0.093271397415489,"cwo",1
"GO:0002064","GO:0002064","epithelial cell development","2/14","360/11267",0.071931918893462,1,0.093271397415489,"sty/Ptpmeg2",2
"GO:0001763","GO:0001763","morphogenesis of a branching structure","1/14","60/11267",0.0720676997363678,1,0.093271397415489,"sty",1
"GO:0048754","GO:0048754","branching morphogenesis of an epithelial tube","1/14","60/11267",0.0720676997363678,1,0.093271397415489,"sty",1
"GO:0060446","GO:0060446","branching involved in open tracheal system development","1/14","60/11267",0.0720676997363678,1,0.093271397415489,"sty",1
"GO:0061138","GO:0061138","morphogenesis of a branching epithelium","1/14","60/11267",0.0720676997363678,1,0.093271397415489,"sty",1
"GO:0007173","GO:0007173","epidermal growth factor receptor signaling pathway","1/14","61/11267",0.0732268906173966,1,0.0937470861389146,"sty",1
"GO:0038127","GO:0038127","ERBB signaling pathway","1/14","61/11267",0.0732268906173966,1,0.0937470861389146,"sty",1
"GO:0055002","GO:0055002","striated muscle cell development","1/14","62/11267",0.0743847367294223,1,0.0947174067013017,"sty",1
"GO:0055001","GO:0055001","muscle cell development","1/14","63/11267",0.075541239512625,1,0.0956756481302597,"sty",1
"GO:0048749","GO:0048749","compound eye development","2/14","373/11267",0.0765256040487225,1,0.0961107774508421,"sty/Pcyt1",2
"GO:0001933","GO:0001933","negative regulation of protein phosphorylation","1/14","64/11267",0.076696400405772,1,0.0961107774508421,"sty",1
"GO:0048542","GO:0048542","lymph gland development","1/14","65/11267",0.0778502208462184,1,0.0970432115811587,"sty",1
"GO:0042326","GO:0042326","negative regulation of phosphorylation","1/14","66/11267",0.0790027022699067,1,0.0979642216077653,"sty",1
"GO:0044255","GO:0044255","cellular lipid metabolic process","2/14","385/11267",0.0808507788226588,1,0.0997336909818982,"Pi3K21B/Pcyt1",2
"GO:0045017","GO:0045017","glycerolipid biosynthetic process","1/14","68/11267",0.0813036538037297,1,0.0997726866966959,"Pcyt1",1
"GO:0007560","GO:0007560","imaginal disc morphogenesis","2/14","389/11267",0.0823100777143402,1,0.0998567254080907,"sty/Pcyt1",2
"GO:0048563","GO:0048563","post-embryonic animal organ morphogenesis","2/14","389/11267",0.0823100777143402,1,0.0998567254080907,"sty/Pcyt1",2
"GO:0045475","GO:0045475","locomotor rhythm","1/14","70/11267",0.0835992664666046,1,0.0998567254080907,"Irk1",1
"GO:0001654","GO:0001654","eye development","2/14","395/11267",0.084515131987002,1,0.0998567254080907,"sty/Pcyt1",2
"GO:0048880","GO:0048880","sensory system development","2/14","395/11267",0.084515131987002,1,0.0998567254080907,"sty/Pcyt1",2
"GO:0150063","GO:0150063","visual system development","2/14","395/11267",0.084515131987002,1,0.0998567254080907,"sty/Pcyt1",2
"GO:0008654","GO:0008654","phospholipid biosynthetic process","1/14","71/11267",0.0847450742963329,1,0.0998567254080907,"Pcyt1",1
"GO:0042391","GO:0042391","regulation of membrane potential","1/14","71/11267",0.0847450742963329,1,0.0998567254080907,"Irk1",1
"GO:0098742","GO:0098742","cell-cell adhesion via plasma-membrane adhesion molecules","1/14","73/11267",0.0870327000898757,1,0.102044593643679,"ImpL2",1
"GO:0030855","GO:0030855","epithelial cell differentiation","2/14","413/11267",0.0912429260111377,1,0.106290814067552,"sty/Ptpmeg2",2
"GO:0009950","GO:0009950","dorsal/ventral axis specification","1/14","77/11267",0.0915920320950336,1,0.106290814067552,"sty",1
"GO:0065009","GO:0065009","regulation of molecular function","2/14","415/11267",0.0920006046206922,1,0.106290814067552,"sty/Pi3K21B",2
"GO:0045595","GO:0045595","regulation of cell differentiation","2/14","418/11267",0.0931408345579486,1,0.1069244680246,"sty/cwo",2
"GO:0009267","GO:0009267","cellular response to starvation","1/14","79/11267",0.0938637610458449,1,0.1069244680246,"Sesn",1
"GO:0006468","GO:0006468","protein phosphorylation","2/14","420/11267",0.0939034439184932,1,0.1069244680246,"sty/Ptpmeg2",2
"GO:0010563","GO:0010563","negative regulation of phosphorus metabolic process","1/14","80/11267",0.0949976462215114,1,0.107140202505464,"sty",1
"GO:0045936","GO:0045936","negative regulation of phosphate metabolic process","1/14","80/11267",0.0949976462215114,1,0.107140202505464,"sty",1
"GO:0042752","GO:0042752","regulation of circadian rhythm","1/14","81/11267",0.0961302137510459,1,0.107394727378279,"cwo",1
"GO:0046488","GO:0046488","phosphatidylinositol metabolic process","1/14","81/11267",0.0961302137510459,1,0.107394727378279,"Pi3K21B",1
"GO:0016236","GO:0016236","macroautophagy","1/14","82/11267",0.0972614650479783,1,0.108148404426959,"Sesn",1
"GO:0031669","GO:0031669","cellular response to nutrient levels","1/14","83/11267",0.0983914015244494,1,0.108893582602071,"Sesn",1
"GO:0031331","GO:0031331","positive regulation of cellular catabolic process","1/14","84/11267",0.0995200245912103,1,0.10912283398159,"Sesn",1
"GO:0042063","GO:0042063","gliogenesis","1/14","84/11267",0.0995200245912103,1,0.10912283398159,"sty",1
"GO:0031668","GO:0031668","cellular response to extracellular stimulus","1/14","85/11267",0.100647335657626,1,0.109570076315173,"Sesn",1
"GO:0048707","GO:0048707","instar larval or pupal morphogenesis","2/14","438/11267",0.100853168021655,1,0.109570076315173,"sty/Pcyt1",2
"GO:0048667","GO:0048667","cell morphogenesis involved in neuron differentiation","2/14","444/11267",0.103203265522903,1,0.111304440331494,"ImpL2/cwo",2
"GO:0031400","GO:0031400","negative regulation of protein modification process","1/14","88/11267",0.104021410927647,1,0.111304440331494,"sty",1
"GO:0043086","GO:0043086","negative regulation of catalytic activity","1/14","88/11267",0.104021410927647,1,0.111304440331494,"sty",1
"GO:0009886","GO:0009886","post-embryonic animal morphogenesis","2/14","450/11267",0.105569570550431,1,0.111304440331494,"sty/Pcyt1",2
"GO:0048812","GO:0048812","neuron projection morphogenesis","2/14","451/11267",0.105965507424624,1,0.111304440331494,"ImpL2/cwo",2
"GO:0042051","GO:0042051","compound eye photoreceptor development","1/14","90/11267",0.106264260215271,1,0.111304440331494,"sty",1
"GO:0045859","GO:0045859","regulation of protein kinase activity","1/14","90/11267",0.106264260215271,1,0.111304440331494,"sty",1
"GO:0120039","GO:0120039","plasma membrane bounded cell projection morphogenesis","2/14","452/11267",0.106361883903285,1,0.111304440331494,"ImpL2/cwo",2
"GO:0048858","GO:0048858","cell projection morphogenesis","2/14","454/11267",0.107155949662286,1,0.111304440331494,"ImpL2/cwo",2
"GO:0071496","GO:0071496","cellular response to external stimulus","1/14","91/11267",0.1073837287987,1,0.111304440331494,"Sesn",1
"GO:0010506","GO:0010506","regulation of autophagy","1/14","92/11267",0.10850189520858,1,0.111304440331494,"Sesn",1
"GO:0048569","GO:0048569","post-embryonic animal organ development","2/14","459/11267",0.109148702201428,1,0.111304440331494,"sty/Pcyt1",2
"GO:0030258","GO:0030258","lipid modification","1/14","93/11267",0.109618760843218,1,0.111304440331494,"Pi3K21B",1
"GO:2000027","GO:2000027","regulation of animal organ morphogenesis","1/14","93/11267",0.109618760843218,1,0.111304440331494,"sty",1
"GO:0060562","GO:0060562","epithelial tube morphogenesis","2/14","461/11267",0.109948807167025,1,0.111304440331494,"sty/Pcyt1",2
"GO:0042462","GO:0042462","eye photoreceptor cell development","1/14","94/11267",0.110734327099545,1,0.111304440331494,"sty",1
"GO:0032990","GO:0032990","cell part morphogenesis","2/14","463/11267",0.110750610869827,1,0.111304440331494,"ImpL2/cwo",2
"GO:0007552","GO:0007552","metamorphosis","2/14","465/11267",0.111554101495189,1,0.111304440331494,"sty/Pcyt1",2
"GO:0046578","GO:0046578","regulation of Ras protein signal transduction","1/14","95/11267",0.111848595373115,1,0.111304440331494,"sty",1
"GO:0071363","GO:0071363","cellular response to growth factor stimulus","1/14","95/11267",0.111848595373115,1,0.111304440331494,"sty",1
"GO:0048639","GO:0048639","positive regulation of developmental growth","1/14","96/11267",0.112961567058111,1,0.111475230649452,"Orct2",1
"GO:0070848","GO:0070848","response to growth factor","1/14","96/11267",0.112961567058111,1,0.111475230649452,"sty",1
"GO:0019637","GO:0019637","organophosphate metabolic process","2/14","477/11267",0.116409814080878,1,0.114401433361859,"Pi3K21B/Pcyt1",2
"GO:0031175","GO:0031175","neuron projection development","2/14","479/11267",0.117224785736278,1,0.114425453945371,"ImpL2/cwo",2
"GO:0009896","GO:0009896","positive regulation of catabolic process","1/14","100/11267",0.117400515747951,1,0.114425453945371,"Sesn",1
"GO:0007423","GO:0007423","sensory organ development","2/14","487/11267",0.12050049652664,1,0.116333891924234,"sty/Pcyt1",2
"GO:0051056","GO:0051056","regulation of small GTPase mediated signal transduction","1/14","103/11267",0.120716181196232,1,0.116333891924234,"sty",1
"GO:0006629","GO:0006629","lipid metabolic process","2/14","488/11267",0.120911717081089,1,0.116333891924234,"Pi3K21B/Pcyt1",2
"GO:0000904","GO:0000904","cell morphogenesis involved in differentiation","2/14","489/11267",0.121323323288985,1,0.116333891924234,"ImpL2/cwo",2
"GO:0048512","GO:0048512","circadian behavior","1/14","104/11267",0.121818830198673,1,0.116338016955439,"Irk1",1
"GO:0051235","GO:0051235","maintenance of location","1/14","105/11267",0.12292019509854,1,0.116918384684725,"ImpL2",1
"GO:0007622","GO:0007622","rhythmic behavior","1/14","106/11267",0.124020277276342,1,0.117024795081472,"Irk1",1
"GO:0008361","GO:0008361","regulation of cell size","1/14","106/11267",0.124020277276342,1,0.117024795081472,"Pi3K21B",1
"GO:0006811","GO:0006811","ion transport","2/14","498/11267",0.125044901564486,1,0.117447741206928,"Orct2/Irk1",2
"GO:0035239","GO:0035239","tube morphogenesis","2/14","499/11267",0.125460287107045,1,0.117447741206928,"sty/Pcyt1",2
"GO:0030097","GO:0030097","hemopoiesis","1/14","108/11267",0.126216598980978,1,0.11769057095201,"sty",1
"GO:0042461","GO:0042461","photoreceptor cell development","1/14","111/11267",0.129501495556971,1,0.1202800268331,"sty",1
"GO:0051146","GO:0051146","striated muscle cell differentiation","1/14","112/11267",0.130593910316939,1,0.120820846304734,"sty",1
"GO:0044092","GO:0044092","negative regulation of molecular function","1/14","114/11267",0.132774921916919,1,0.122360669388928,"sty",1
"GO:0008038","GO:0008038","neuron recognition","1/14","115/11267",0.133863521494895,1,0.122885729646476,"ImpL2",1
"GO:0002520","GO:0002520","immune system development","1/14","119/11267",0.138205243539976,1,0.125413106660595,"sty",1
"GO:0045927","GO:0045927","positive regulation of growth","1/14","119/11267",0.138205243539976,1,0.125413106660595,"Orct2",1
"GO:0048534","GO:0048534","hematopoietic or lymphoid organ development","1/14","119/11267",0.138205243539976,1,0.125413106660595,"sty",1
"GO:0008037","GO:0008037","cell recognition","1/14","120/11267",0.139287511802484,1,0.125912776840333,"ImpL2",1
"GO:0007298","GO:0007298","border follicle cell migration","1/14","121/11267",0.140368517887956,1,0.126407510605524,"Ptpmeg2",1
"GO:0042692","GO:0042692","muscle cell differentiation","1/14","126/11267",0.145754663173825,1,0.129757769263629,"sty",1
"GO:0010876","GO:0010876","lipid localization","1/14","127/11267",0.146828124686756,1,0.129757769263629,"ImpL2",1
"GO:0043408","GO:0043408","regulation of MAPK cascade","1/14","127/11267",0.146828124686756,1,0.129757769263629,"sty",1
"GO:0098609","GO:0098609","cell-cell adhesion","1/14","127/11267",0.146828124686756,1,0.129757769263629,"ImpL2",1
"GO:1901605","GO:1901605","alpha-amino acid metabolic process","1/14","127/11267",0.146828124686756,1,0.129757769263629,"CG1673",1
"GO:0007297","GO:0007297","ovarian follicle cell migration","1/14","133/11267",0.153242634398622,1,0.134923078613539,"Ptpmeg2",1
"GO:0006470","GO:0006470","protein dephosphorylation","1/14","134/11267",0.154307355354112,1,0.135357329257993,"Ptpmeg2",1
"GO:0022411","GO:0022411","cellular component disassembly","1/14","140/11267",0.160669619188679,1,0.140418195057109,"Sesn",1
"GO:0000165","GO:0000165","MAPK cascade","1/14","146/11267",0.166987413783612,1,0.145403127327061,"sty",1
"GO:0023014","GO:0023014","signal transduction by protein phosphorylation","1/14","150/11267",0.171174713544012,1,0.148503221698102,"sty",1
"GO:0016053","GO:0016053","organic acid biosynthetic process","1/14","152/11267",0.173261026203314,1,0.149220022567447,"CG1673",1
"GO:0046394","GO:0046394","carboxylic acid biosynthetic process","1/14","152/11267",0.173261026203314,1,0.149220022567447,"CG1673",1
"GO:0009953","GO:0009953","dorsal/ventral pattern formation","1/14","153/11267",0.174302352845972,1,0.149572957247688,"sty",1
"GO:0002164","GO:0002164","larval development","1/14","160/11267",0.18155760791426,1,0.155236411859048,"sty",1
"GO:0007219","GO:0007219","Notch signaling pathway","1/14","161/11267",0.18258922702736,1,0.155556895422779,"cwo",1
"GO:0048813","GO:0048813","dendrite morphogenesis","1/14","164/11267",0.185676844285842,1,0.15736399786598,"cwo",1
"GO:0006914","GO:0006914","autophagy","1/14","165/11267",0.18670364102366,1,0.15736399786598,"Sesn",1
"GO:0061919","GO:0061919","process utilizing autophagic mechanism","1/14","165/11267",0.18670364102366,1,0.15736399786598,"Sesn",1
"GO:0007265","GO:0007265","Ras protein signal transduction","1/14","167/11267",0.188753628784703,1,0.158527683749751,"sty",1
"GO:0010631","GO:0010631","epithelial cell migration","1/14","168/11267",0.189776822406056,1,0.158823823847359,"Ptpmeg2",1
"GO:0090132","GO:0090132","epithelium migration","1/14","169/11267",0.190798817584569,1,0.159116879008628,"Ptpmeg2",1
"GO:0045664","GO:0045664","regulation of neuron differentiation","1/14","173/11267",0.19487483976791,1,0.161655763735408,"sty",1
"GO:0016358","GO:0016358","dendrite development","1/14","174/11267",0.195890862144262,1,0.161655763735408,"cwo",1
"GO:0032535","GO:0032535","regulation of cellular component size","1/14","174/11267",0.195890862144262,1,0.161655763735408,"Pi3K21B",1
"GO:0015672","GO:0015672","monovalent inorganic cation transport","1/14","175/11267",0.196905693833614,1,0.161929024534222,"Irk1",1
"GO:0001751","GO:0001751","compound eye photoreceptor cell differentiation","1/14","177/11267",0.19893179030267,1,0.162466979376047,"sty",1
"GO:0090130","GO:0090130","tissue migration","1/14","177/11267",0.19893179030267,1,0.162466979376047,"Ptpmeg2",1
"GO:0031329","GO:0031329","regulation of cellular catabolic process","1/14","178/11267",0.199943057654858,1,0.162731734390823,"Sesn",1
"GO:0001754","GO:0001754","eye photoreceptor cell differentiation","1/14","183/11267",0.204981636927332,1,0.16626124119917,"sty",1
"GO:0007264","GO:0007264","small GTPase mediated signal transduction","1/14","186/11267",0.207990624575552,1,0.168126066209805,"sty",1
"GO:0007626","GO:0007626","locomotory behavior","1/14","188/11267",0.209990737649426,1,0.168480699119344,"Irk1",1
"GO:0001667","GO:0001667","ameboidal-type cell migration","1/14","190/11267",0.211986159647494,1,0.168480699119344,"Ptpmeg2",1
"GO:0006520","GO:0006520","cellular amino acid metabolic process","1/14","190/11267",0.211986159647494,1,0.168480699119344,"CG1673",1
"GO:0006897","GO:0006897","endocytosis","1/14","190/11267",0.211986159647494,1,0.168480699119344,"Pcyt1",1
"GO:0048732","GO:0048732","gland development","1/14","190/11267",0.211986159647494,1,0.168480699119344,"sty",1
"GO:0009798","GO:0009798","axis specification","1/14","191/11267",0.212982114668252,1,0.168706128499759,"sty",1
"GO:0000122","GO:0000122","negative regulation of transcription by RNA polymerase II","1/14","193/11267",0.214970519092486,1,0.169149735253749,"cwo",1
"GO:0032269","GO:0032269","negative regulation of cellular protein metabolic process","1/14","193/11267",0.214970519092486,1,0.169149735253749,"sty",1
"GO:0051248","GO:0051248","negative regulation of protein metabolic process","1/14","194/11267",0.215962971027894,1,0.169367962639513,"sty",1
"GO:0030001","GO:0030001","metal ion transport","1/14","196/11267",0.217944380665689,1,0.170357775403092,"Irk1",1
"GO:0016311","GO:0016311","dephosphorylation","1/14","199/11267",0.220907778463371,1,0.172106129343001,"Ptpmeg2",1
"GO:0009894","GO:0009894","regulation of catabolic process","1/14","200/11267",0.221893258324368,1,0.172307103099164,"Sesn",1
"GO:0007155","GO:0007155","cell adhesion","1/14","204/11267",0.225823614243862,1,0.174216743373458,"ImpL2",1
"GO:0046530","GO:0046530","photoreceptor cell differentiation","1/14","204/11267",0.225823614243862,1,0.174216743373458,"sty",1
"GO:0022610","GO:0022610","biological adhesion","1/14","206/11267",0.227781871632733,1,0.175156941617788,"ImpL2",1
"GO:0007005","GO:0007005","mitochondrion organization","1/14","212/11267",0.233629081428075,1,0.178494204826203,"Sesn",1
"GO:0051241","GO:0051241","negative regulation of multicellular organismal process","1/14","212/11267",0.233629081428075,1,0.178494204826203,"sty",1
"GO:0001932","GO:0001932","regulation of protein phosphorylation","1/14","216/11267",0.237504352178813,1,0.180291765317925,"sty",1
"GO:0051093","GO:0051093","negative regulation of developmental process","1/14","216/11267",0.237504352178813,1,0.180291765317925,"sty",1
"GO:0008610","GO:0008610","lipid biosynthetic process","1/14","220/11267",0.241361420164708,1,0.182634335083434,"Pcyt1",1
"GO:0098657","GO:0098657","import into cell","1/14","225/11267",0.246157277758764,1,0.1856700888224,"Pcyt1",1
"GO:0048638","GO:0048638","regulation of developmental growth","1/14","228/11267",0.249021263339165,1,0.187234032585838,"Orct2",1
"GO:0042127","GO:0042127","regulation of cell proliferation","1/14","230/11267",0.250924970388525,1,0.187475073343577,"Pi3K21B",1
"GO:0061061","GO:0061061","muscle structure development","1/14","230/11267",0.250924970388525,1,0.187475073343577,"sty",1
"GO:0090407","GO:0090407","organophosphate biosynthetic process","1/14","234/11267",0.254718948392814,1,0.189711232665949,"Pcyt1",1
"GO:0007424","GO:0007424","open tracheal system development","1/14","237/11267",0.257552713624889,1,0.191220460536545,"sty",1
"GO:0090066","GO:0090066","regulation of anatomical structure size","1/14","245/11267",0.265060582214833,1,0.195647828842211,"Pi3K21B",1
"GO:0022603","GO:0022603","regulation of anatomical structure morphogenesis","1/14","246/11267",0.26599409263481,1,0.195647828842211,"sty",1
"GO:0060541","GO:0060541","respiratory system development","1/14","246/11267",0.26599409263481,1,0.195647828842211,"sty",1
"GO:0051094","GO:0051094","positive regulation of developmental process","1/14","253/11267",0.272497900790681,1,0.19981107276488,"Orct2",1
"GO:0044283","GO:0044283","small molecule biosynthetic process","1/14","257/11267",0.276190295386823,1,0.201893490779841,"CG1673",1
"GO:0051240","GO:0051240","positive regulation of multicellular organismal process","1/14","261/11267",0.279865281744782,1,0.203950407749234,"Orct2",1
"GO:0080134","GO:0080134","regulation of response to stress","1/14","265/11267",0.283522935651961,1,0.205982113405526,"Sesn",1
"GO:0007411","GO:0007411","axon guidance","1/14","273/11267",0.290786547751903,1,0.210613144195005,"ImpL2",1
"GO:0006915","GO:0006915","apoptotic process","1/14","278/11267",0.295291518869658,1,0.21322397864465,"chrb",1
"GO:0097485","GO:0097485","neuron projection guidance","1/14","282/11267",0.298876348352847,1,0.215156545766727,"ImpL2",1
"GO:0006935","GO:0006935","chemotaxis","1/14","292/11267",0.307764473331933,1,0.220883593300431,"ImpL2",1
"GO:0016477","GO:0016477","cell migration","1/14","305/11267",0.319162648238305,1,0.228372065045694,"Ptpmeg2",1
"GO:0031399","GO:0031399","regulation of protein modification process","1/14","321/11267",0.332951910631831,1,0.237521179112752,"sty",1
"GO:0007409","GO:0007409","axonogenesis","1/14","333/11267",0.343123176097986,1,0.244042088263148,"ImpL2",1
"GO:0012501","GO:0012501","programmed cell death","1/14","345/11267",0.35315026918554,1,0.250260385443153,"chrb",1
"GO:0061564","GO:0061564","axon development","1/14","346/11267",0.353979411854593,1,0.250260385443153,"ImpL2",1
"GO:0018193","GO:0018193","peptidyl-amino acid modification","1/14","350/11267",0.357286123529097,1,0.251846421660548,"Ptpmeg2",1
"GO:0042330","GO:0042330","taxis","1/14","353/11267",0.35975583564079,1,0.252834805619796,"ImpL2",1
"GO:0009967","GO:0009967","positive regulation of signal transduction","1/14","355/11267",0.36139741150861,1,0.253062459020568,"ImpL2",1
"GO:0048870","GO:0048870","cell motility","1/14","356/11267",0.36221673301144,1,0.253062459020568,"Ptpmeg2",1
"GO:0008283","GO:0008283","cell proliferation","1/14","359/11267",0.364668844689964,1,0.254026285000749,"Pi3K21B",1
"GO:0051674","GO:0051674","localization of cell","1/14","361/11267",0.366298719174314,1,0.254413371860536,"Ptpmeg2",1
"GO:0048589","GO:0048589","developmental growth","1/14","364/11267",0.368736252347485,1,0.255357515476098,"Orct2",1
"GO:0045892","GO:0045892","negative regulation of transcription, DNA-templated","1/14","381/11267",0.382385285254623,1,0.262507060815531,"cwo",1
"GO:1902679","GO:1902679","negative regulation of RNA biosynthetic process","1/14","381/11267",0.382385285254623,1,0.262507060815531,"cwo",1
"GO:1903507","GO:1903507","negative regulation of nucleic acid-templated transcription","1/14","381/11267",0.382385285254623,1,0.262507060815531,"cwo",1
"GO:0008219","GO:0008219","cell death","1/14","385/11267",0.385556744881203,1,0.26347785680777,"chrb",1
"GO:0010647","GO:0010647","positive regulation of cell communication","1/14","387/11267",0.387136797602883,1,0.26347785680777,"ImpL2",1
"GO:0023056","GO:0023056","positive regulation of signaling","1/14","387/11267",0.387136797602883,1,0.26347785680777,"ImpL2",1
"GO:0051253","GO:0051253","negative regulation of RNA metabolic process","1/14","399/11267",0.396538158855531,1,0.269102958053067,"cwo",1
"GO:0019752","GO:0019752","carboxylic acid metabolic process","1/14","415/11267",0.408865070183416,1,0.276675611402311,"CG1673",1
"GO:0045934","GO:0045934","negative regulation of nucleobase-containing compound metabolic process","1/14","421/11267",0.413427070716491,1,0.278965634761465,"cwo",1
"GO:0043436","GO:0043436","oxoacid metabolic process","1/14","430/11267",0.420208808228705,1,0.282736189747185,"CG1673",1
"GO:0006082","GO:0006082","organic acid metabolic process","1/14","432/11267",0.421705939840281,1,0.282939724061617,"CG1673",1
"GO:0032879","GO:0032879","regulation of localization","1/14","442/11267",0.429137900530271,1,0.287112779123732,"ImpL2",1
"GO:0010558","GO:0010558","negative regulation of macromolecule biosynthetic process","1/14","446/11267",0.432085773750794,1,0.287460967161232,"cwo",1
"GO:2000113","GO:2000113","negative regulation of cellular macromolecule biosynthetic process","1/14","446/11267",0.432085773750794,1,0.287460967161232,"cwo",1
"GO:0048584","GO:0048584","positive regulation of response to stimulus","1/14","456/11267",0.43939372945221,1,0.290358988184465,"ImpL2",1
"GO:0009890","GO:0009890","negative regulation of biosynthetic process","1/14","457/11267",0.440119701868052,1,0.290358988184465,"cwo",1
"GO:0031327","GO:0031327","negative regulation of cellular biosynthetic process","1/14","457/11267",0.440119701868052,1,0.290358988184465,"cwo",1
"GO:0002376","GO:0002376","immune system process","1/14","464/11267",0.445177117663017,1,0.292879682673038,"sty",1
"GO:0003002","GO:0003002","regionalization","1/14","467/11267",0.447331568024791,1,0.293481856846706,"sty",1
"GO:0016192","GO:0016192","vesicle-mediated transport","1/14","498/11267",0.46914389447358,1,0.306942065299667,"Pcyt1",1


Disease,ICD10code,ICD10codeDescr,Category
Lower Respiratory Tract Infections,A06.5,Amoebic lung abscess,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A15,"Respiratory tuberculosis, bacteriologically and histologically confirmed",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A16,"Respiratory tuberculosis, not confirmed bacteriologically or histologically",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A20.2,Pneumonic plague,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A21.2,Pulmonary tularaemia,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A22.1,Pulmonary Anthrax,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A31.0,Pulmonary mycobacterial infection,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A37,Whooping cough,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A42.0,Pulmonary actinomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A43.0,Pulmonary nocardiosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B01.2,Varicella pneumonia,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B05.2,Measles complicated by pneumonia,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B25.0,Cytomegaloviral pneumonitis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B37.1,Pulmonary candidiasis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B38.0,Acute pulmonary coccidioidomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B38.1,Chronic pulmonary coccidioidomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B38.2,"Pulmonary coccidioidomycosis, unspecified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B39.0,Acute pulmonary histoplasmosis capsulati,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B39.1,Chronic pulmonary histoplasmosis capsulati,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B39.2,"Pulmonary histoplasmosis capsulati, unspecified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B40.0,Acute pulmonary blastomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B40.1,Chronic pulmonary blastomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B40.2,"Pulmonary blastomycosis, unspecified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B41.0,Pulmonary paracoccidioidomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B42.0,Pulmonary sporotrichosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B44.0,Invasive pulmonary aspergillosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B44.1,Other pulmonary aspergillosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B45.0,Pulmonary cryptococcosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B46.0,Pulmonary mucormycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B58.3,Pulmonary toxoplasmosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B59,Pneumocystosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B67.1,Echinococcus granulosus infection of lung,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J10.0,"Influenza with pneumonia, other influenza virus identified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J11.0,"Influenza with pneumonia, virus not identified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J12,"Viral pneumonia, not elsewhere classified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J13,Pneumonia due to Streptococcus pneumoniae,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J14,Pneumonia due to Haemophilus influenzae,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J15,"Bacterial pneumonia, not elsewhere classified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J16,"Pneumonia due to other infectious organisms, not elsewhere classified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J17,Pneumonia in diseases classified elsewhere,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J18,"Pneumonia, organism unspecified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J20,Acute bronchitis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J21,Acute bronchiolitis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J22,Unspecified acute lower respiratory infection,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J44.0,Chronic obstructive pulmonary disease with acute lower respiratory infection,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J44.1,"Chronic obstructive pulmonary disease with acute exacerbation, unspecified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J65,Pneumoconiosis associated with tuberculosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J85.0,Gangrene and necrosis of lung,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J85.1,Abscess of lung with pneumonia,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J85.2,Abscess of lung without pneumonia,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J86,Pyothorax,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,P23,Congenital pneumonia,Diagnosis of Lower Respiratory Tract Infections


Panther ID,Gene ID,PANTHER Family/Subfamily,PANTHER Protein Class,GO Database MF Complete,GO Database BP Complete,GO Database CC Complete,,
ARATH|TAIR=locus=2135129|UniProtKB=O65638,AT4G36010,PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN (PTHR31048:SF125),-,molecular_function,defense response,extracellular region; anchored component of membrane,,
ARATH|TAIR=locus=2046006|UniProtKB=Q9SIU5,AT2G20670,EXPRESSED PROTEIN (PTHR31579:SF37),-,-,-,nucleus; chloroplast,,
ARATH|TAIR=locus=2091762|UniProtKB=Q9LV52,AT3G24520,HEAT STRESS TRANSCRIPTION FACTOR C-1 (PTHR10015:SF332),winged helix/forkhead transcription factor,RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity; protein binding,regulation of transcription by RNA polymerase II; cellular response to heat,nucleus; host cell nucleus,,
ARATH|TAIR=locus=2079691|UniProtKB=Q9SRT1,AT3G07350,F21O3.6 PROTEIN (PTHR31579:SF44),-,-,cellular response to hypoxia,mitochondrion,,
ARATH|TAIR=locus=2097870|UniProtKB=Q9SB04,AT3G48100,TWO-COMPONENT RESPONSE REGULATOR ARR5 (PTHR43874:SF94),winged helix/forkhead transcription factor,phosphorelay response regulator activity; protein binding,regulation of transcription; DNA-templated; circadian rhythm; response to cytokinin; cytokinin-activated signaling pathway,nucleus; cytoplasm,,
ARATH|TAIR=locus=2031210|UniProtKB=Q9FPE8,AT1G25550,TRANSCRIPTION FACTOR HHO3 (PTHR31003:SF24),-,DNA binding;  DNA-binding transcription factor activity,regulation of transcription; DNA-templated; cellular response to hypoxia,nucleus; mitochondrion,,
ARATH|TAIR=locus=2182187|UniProtKB=Q93VG3,AT5G19120,BASIC 7S GLOBULIN 2 SMALL SUBUNIT (PTHR47965:SF46),-,aspartic-type endopeptidase activity,cellular response to hypoxia,extracellular region,,
ARATH|TAIR=locus=2065058|UniProtKB=Q9XEE6,AT2G40140,ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 (PTHR14493:SF86),-,DNA-binding transcription factor activity; protein binding,regulation of transcription; DNA-templated; response to cold; response to chitin; defense response to fungus; cellular response to hypoxia,nucleus,,
ARATH|TAIR=locus=2206885|UniProtKB=Q9FX43,AT1G73500,SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED (PTHR24361:SF769),-,protein serine/threonine kinase activity; MAP kinase kinase activity; protein binding; protein kinase activator activity,response to wounding; response to fungus; response to salt stress; ethylene biosynthetic process; ethylene-activated signaling pathway; camalexin biosynthetic process; leaf senescence; positive regulation of transcription; DNA-templated; protein autophosphorylation; cellular response to hypoxia,mitochondrion,,
ARATH|TAIR=locus=2115060|UniProtKB=O23160,AT4G37260,TRANSCRIPTION FACTOR MYB73 (PTHR45614:SF124),-,transcription regulatory region sequence-specific DNA binding; RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity;  RNA polymerase II-specific; DNA-binding transcription factor activity; protein binding,regulation of transcription; DNA-templated; response to chitin; positive regulation of auxin mediated signaling pathway; glucosinolate metabolic process; negative regulation of response to salt stress,nucleus,,
ARATH|TAIR=locus=2151591|UniProtKB=Q9FKG1,AT5G61600,ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF104 (PTHR31677:SF50),-,DNA-binding transcription factor activity;protein binding,phloem or xylem histogenesis; positive regulation of transcription; DNA-templated; defense response to fungus; cell division,nucleus,,
ARATH|TAIR=locus=2035843|UniProtKB=Q9XI67,AT1G14200,RING/U-BOX SUPERFAMILY PROTEIN (PTHR15710:SF45),-,ubiquitin protein ligase activity,defense response; incompatible interaction; protein ubiquitination; cellular response to hypoxia,nucleus; cytoplasm,,
ARATH|TAIR=locus=2088100|UniProtKB=Q9LTT7,AT3G13310,CHAPERONE PROTEIN DNAJ 11; CHLOROPLASTIC-LIKE (PTHR44240:SF17),-,-,cellular response to hypoxia,chloroplast,,
ARATH|TAIR=locus=2031220|UniProtKB=Q9C6L0,AT1G25400,BNAANNG41370D PROTEIN (PTHR36715:SF1),-,molecular_function,biological_process,nucleus,,
ARATH|TAIR=locus=2170862|UniProtKB=P33077,AT5G43700,AUXIN-RESPONSIVE PROTEIN IAA4 (PTHR31734:SF188),-,transcription regulatory region sequence-specific DNA binding;DNA binding;DNA-binding transcription factor activity; protein binding; identical protein binding,regulation of transcription; DNA-templated; response to auxin,nucleus,,
ARATH|TAIR=locus=2137599|UniProtKB=P46604,AT4G37790,HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22 (PTHR45714:SF14),-,transcription regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity; RNA polymerase II-specific; DNA-binding transcription factor activity; protein binding,response to water deprivation; response to cytokinin; response to abscisic acid; abscisic acid-activated signaling pathway,nucleus,,
ARATH|TAIR=locus=2120056|UniProtKB=Q6EJ98,AT4G37610,BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 5 (PTHR46287:SF9),-,calmodulin binding,regulation of transcription; DNA-templated; response to cold; response to auxin; response to salicylic acid; response to chitin; protein ubiquitination; response to hydrogen peroxide,nucleus; cytoplasm,,
ARATH|TAIR=locus=2205319|UniProtKB=Q9ZWM9,AT1G13260,AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR RAV1 (PTHR31140:SF76),-,transcription regulatory region sequence-specific DNA binding; DNA binding; DNA-binding transcription factor activity,response to brassinosteroid; negative regulation of flower development; negative regulation of transcription; DNA-templated; leaf development; lateral root development; cellular response to hypoxia,nucleus,,
ARATH|TAIR=locus=2121974|UniProtKB=Q9SB52,AT4G24570,MITOCHONDRIAL DICARBOXYLATE CARRIER (PTHR45618:SF13),-,dicarboxylic acid transmembrane transporter activity; ATP transmembrane transporter activity; sulfate transmembrane transporter activity; thiosulfate transmembrane transporter activity; oxaloacetate transmembrane transporter activity; malate transmembrane transporter activity; succinate transmembrane transporter activity,mitochondrial transport; sulfate transport; thiosulfate transport; oxaloacetate transport; phosphate ion transmembrane transport; succinate transmembrane transport; malate transmembrane transport; cellular response to hypoxia,mitochondrion,,
ARATH|TAIR=locus=2102340|UniProtKB=Q9LI84,AT3G25600,CALCIUM-BINDING PROTEIN CML16-RELATED (PTHR23050:SF362),calmodulin-related,calcium ion binding; enzyme regulator activity,microtubule cytoskeleton organization; calcium-mediated signaling,nucleus,,
ARATH|TAIR=locus=2082068|UniProtKB=Q93ZS9,AT3G55980,ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 47 (PTHR14493:SF115),-,DNA-binding transcription factor activity,regulation of transcription; DNA-templated; response to chitin; cellular response to hypoxia,nucleus,,
ARATH|TAIR=locus=2205025|UniProtKB=Q9C9L7,AT1G69760,BNACNNG70820D PROTEIN (PTHR34539:SF3),-,molecular_function,biological_process,nucleus,,
ARATH|TAIR=locus=2101135|UniProtKB=Q94BN0,AT3G48360,BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 2 (PTHR46287:SF4),-,protein binding; calmodulin binding,regulation of transcription; DNA-templated; circadian rhythm; response to cold; embryo sac development; pollen development; response to wounding; response to salt stress; response to auxin; auxin-activated signaling pathway; response to abscisic acid; abscisic acid-activated signaling pathway; response to carbohydrate; response to salicylic acid; response to jasmonic acid; response to nitrate; sugar mediated signaling pathway; protein ubiquitination; response to hydrogen peroxide; positive regulation of telomerase activity,nucleus; cytoplasm,,
ARATH|TAIR=locus=2150823|UniProtKB=Q9FTA0,AT5G08350,GEM-LIKE PROTEIN 4 (PTHR31969:SF38),-,molecular_function,biological_process,cellular_component,,
ARATH|TAIR=locus=2129061|UniProtKB=P46600,AT4G17460,HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1 (PTHR45714:SF20),-,DNA-binding transcription factor activity; RNA polymerase II-specific; DNA-binding transcription factor activity; protein binding; protein self-association,developmental process involved in reproduction; floral meristem determinacy; gynoecium development; meristem development; fruit septum development,nucleus,,
ARATH|TAIR=locus=2098802|UniProtKB=Q940V4,AT3G30180,CYTOCHROME P450 85A2 (PTHR24286:SF245),oxygenase,monooxygenase activity; iron ion binding; oxidoreductase activity; oxidoreductase activity; acting on paired donors; with incorporation or reduction of molecular oxygen; heme binding,multicellular organism development; brassinosteroid homeostasis; sterol metabolic process; brassinosteroid biosynthetic process; oxidation-reduction process,mitochondrion,,
ARATH|TAIR=locus=2128429|UniProtKB=Q9SUQ2,AT4G23750,ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 (PTHR31194:SF140),-,DNA-binding transcription factor activity; protein binding; identical protein binding,regulation of transcription; DNA-templated; root development; cotyledon development,nucleus,,
ARATH|TAIR=locus=2011751|UniProtKB=Q9C9J8,AT1G76600,POLY POLYMERASE (PTHR33052:SF87),-,molecular_function,response to fungus; cellular response to hypoxia,nucleus; nucleolus,,
ARATH|TAIR=locus=2115145|UniProtKB=Q8LE56,AT4G37240,HTH-TYPE TRANSCRIPTIONAL REGULATOR (PTHR33052:SF73),-,molecular_function,response to fungus,cellular_component,,
ARATH|TAIR=locus=2059883|UniProtKB=Q42379,AT2G16720,TRANSCRIPTION FACTOR MYB7 (PTHR47999:SF3),-,DNA-binding transcription factor activity; protein binding,regulation of flavonol biosynthetic process,nucleus,,
ARATH|TAIR=locus=2120071|UniProtKB=Q9SZE8,AT4G37540,LOB DOMAIN-CONTAINING PROTEIN 39 (PTHR31304:SF50),-,-,regulation of gene expression,cellular_component,,
ARATH|TAIR=locus=2091747|UniProtKB=Q9LV58,AT3G24500,MULTIPROTEIN-BRIDGING FACTOR 1C (PTHR10245:SF71),-,DNA-binding transcription factor activity; transcription coactivator activity,response to heat; response to water deprivation; response to abscisic acid; ethylene-activated signaling pathway; positive regulation of transcription; DNA-templated; cellular response to hypoxia,intracellular; nucleus; nucleolus,,
ARATH|TAIR=locus=2083063|UniProtKB=Q9SN23,AT3G49940,LOB DOMAIN-CONTAINING PROTEIN 38 (PTHR31304:SF1),-,protein binding,regulation of gene expression,mitochondrion,,
ARATH|TAIR=locus=2158480|UniProtKB=Q9FH76,AT5G45340,ABSCISIC ACID 8'-HYDROXYLASE 3 (PTHR24286:SF10),oxygenase,monooxygenase activity; iron ion binding; (+)-abscisic acid 8'-hydroxylase activity; oxidoreductase activity; oxidoreductase activity; acting on paired donors; with incorporation or reduction of molecular oxygen; NAD(P)H as one donor; and incorporation of one atom of oxygen; heme binding,response to water deprivation; response to red or far red light; abscisic acid metabolic process; sterol metabolic process; abscisic acid catabolic process; oxidation-reduction process; cellular response to hypoxia,extracellular region; chloroplast,,
ARATH|TAIR=locus=2174497|UniProtKB=Q38857,AT5G57560,XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 22 (PTHR31062:SF188),-,hydrolase activity; hydrolyzing O-glycosyl compounds; xyloglucan:xyloglucosyl transferase activity,response to heat; response to cold; response to mechanical stimulus; plant-type cell wall organization; response to auxin; response to brassinosteroid; xyloglucan metabolic process; cell wall biogenesis; cellular response to hypoxia,cell wall; golgi apparatus; chloroplast; secretory vesicle,,
ARATH|TAIR=locus=2091186|UniProtKB=Q9LJM6,AT3G19680,BNAC05G33040D PROTEIN (PTHR31317:SF16),-,-,-,plasma membrane; plastid,,
ARATH|TAIR=locus=2138753|UniProtKB=Q9ZPE7,AT4G08950,PROTEIN EXORDIUM-RELATED (PTHR31279:SF54),-,molecular_function,response to brassinosteroid,extracellular region; cell wall; golgi appartus; plant-type cell wall,,
ARATH|TAIR=locus=2128298|UniProtKB=Q9SAR0,AT4G11280,1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 6 (PTHR43795:SF6),transaminase,protein binding; 1-aminocyclopropane-1-carboxylate synthase activity; pyridoxal phosphate binding; identical protein binding,response to oxidative stress; response to wounding; response to mechanical stimulus; ethylene biosynthetic process; response to ethylene; response to auxin; response to jasmonic acid; phloem or xylem histogenesis; cell division,cytoplasm,,
ARATH|TAIR=locus=2151576|UniProtKB=Q9FKG2,AT5G61590,ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF107 (PTHR31677:SF74),-,transcription regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity,regulation of transcription; DNA-templated; response to water deprivation; glucosinolate metabolic process; positive regulation of transcription; DNA-templated; negative regulation of wax biosynthetic process,nucleus,,
ARATH|TAIR=locus=2031185|UniProtKB=Q9C6M5,AT1G25560,AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR TEM1 (PTHR31140:SF1),-,DNA binding; DNA-binding transcription factor activity; protein binding,regulation of transcription; DNA-templated; ethylene-activated signaling pathway; photoperiodism; flowering; cellular response to hypoxia,nucleus,,
ARATH|TAIR=locus=2153504|UniProtKB=O82132,AT5G05410,DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED (PTHR31241:SF37),-,transcription regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity; protein binding; sequence-specific DNA binding,regulation of transcription; DNA-templated; response to stress; response to heat; response to water deprivation; response to UV-B; heat acclimation; response to hydrogen peroxide; positive regulation of transcription; DNA-templated; cellular response to hypoxia,nucleus,,
ARATH|TAIR=locus=2125043|UniProtKB=O04609,AT4G01250,DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) FAMILY-RELATED (PTHR32096:SF61),-,transcription regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity; sequence-specific DNA binding,regulation of transcription; DNA-templated; leaf senescence; response to chitin; cellular response to hypoxia,nucleus,,
,AT3G30720,QUA-QUINE STARCH,,protein binding,innate immune response; negative regulation of starch metabolic process; positive regulation of protein metabolic process; starch biosynthetic process,cytosol; mitochondrion; nucleus,,
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Disease,ICD10code,ICD10codeDescr,Category
Other or unspecified infectious organisms,A08.5,Other specified intestinal infections,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A09,Other gastroenteritis and colitis of infectious and unspecified origin,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A41.8,Other specified sepsis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A41.9,"Sepsis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A63.8,Other specified predominantly sexually transmitted diseases,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A64,Unspecified sexually transmitted disease,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A81.0,Creutzfeldt-Jakob disease,Diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A81.8,Other atypical virus infections of central nervous system,Diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A81.9,"Atypical virus infection of central nervous system, unspecified",Diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,B94.8,Sequelae of other specified infectious and parasitic diseases,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,B94.9,Sequelae of unspecified infectious or parasitic disease,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,B99,Other and unspecified infectious diseases,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G02.8,Meningitis in other specified infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G04.8,"Other encephalitis, myelitis and encephalomyelitis",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G04.9,"Encephalitis, myelitis and encephalomyelitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G05.2,"Encephalitis, myelitis and encephalomyelitis in other infectious and parasitic diseases classified elsewhere",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G06,Intracranial and intraspinal abscess and granuloma,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G07,Intracranial and intraspinal abscess and granuloma in diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G08,Intracranial and intraspinal phlebitis and thrombophlebitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G53.1,Multiple cranial nerve palsies in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G63.0,Polyneuropathy in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G94.0,Hydrocephalus in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H10,Conjunctivitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H13.1,Conjunctivitis in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H19.2,Keratitis and keratoconjunctivitis in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H60,Otitis externa,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H62.3,Otitis externa in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H62.4,Otitis externa in other diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H65,Nonsuppurative otitis media,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H66,Suppurative and unspecified otitis media,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H67.8,Otitis media in other diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H70,Mastoiditis and related conditions,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H73.0,Acute myringitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H73.1,Chronic myringitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H75.0,Mastoiditis in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I30.1,Infective pericarditis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I32.1,Pericarditis in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I33.0,Acute and subacute infective endocarditis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I40.0,Infective myocarditis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I41.2,Myocarditis in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I43.0,Cardiomyopathy in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I98.1,Cardiovascular disorders in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J00,Acute nasopharyngitis [common cold],Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J01,Acute sinusitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J02.8,Acute pharyngitis due to other specified organisms,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J02.9,"Acute pharyngitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J03.8,Acute tonsillitis due to other specified organisms,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J03.9,"Acute tonsillitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J04,Acute laryngitis and tracheitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J05,Acute obstructive laryngitis [croup] and epiglottitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J06,Acute upper respiratory infections of multiple and unspecified sites,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J16.8,Pneumonia due to other specified infectious organisms,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J17.8,Pneumonia in other diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J18,"Pneumonia, organism unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J20.8,Acute bronchitis due to other specified organisms,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J20.9,"Acute bronchitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J22,Unspecified acute lower respiratory infection,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J44.0,Chronic obstructive pulmonary disease with acute lower respiratory infection,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J44.1,"Chronic obstructive pulmonary disease with acute exacerbation, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J85,Abscess of lung and mediastinum,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,K75.0,Abscess of liver,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,K77.0,Liver disorders in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,L08.0,Pyoderma,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,L08.8,Other specified local infections of skin and subcutaneous tissue,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,L08.9,"Local infection of skin and subcutaneous tissue, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,L30.3,Infective dermatitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M01.8,Arthritis in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M02,Reactive arthropathies,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M03,Postinfective and reactive arthropathies in diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M46.3,Infection of intervertebral disc (pyogenic),Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M46.4,"Discitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M46.5,Other infective spondylopathies,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M49.3,Spondylopathy in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M60.0,Infective myositis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M63.2,Myositis in other infectious diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N08.0,Glomerular disorders in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N10,Acute tubulo-interstitial nephritis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N16.0,Renal tubulo-interstitial disorders in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N29.1,Other disorders of kidney and ureter in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N30.0,Acute cystitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N30.8,Other cystitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N30.9,"Cystitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N34,Urethritis and urethral syndrome,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N48.1,Balanoposthitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N77.0,Ulceration of vulva in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N77.1,"Vaginitis, vulvitis and vulvovaginitis in infectious and parasitic diseases classified elsewhere",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,P23.8,Congenital pneumonia due to other organisms,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,P23.9,"Congenital pneumonia, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,P37.8,Other specified congenital infectious and parasitic diseases,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,P37.9,"Congenital infectious and parasitic disease, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,P39,Other infections specific to the perinatal period,Possible diagnosis of Other or unspecified infectious organisms


ID,Barcode,LName,FName,DOB,Location,sampType,sampID,sampDate,sampSource,sampSeq,reportLab,reportDate,comments,organism,requestor,requestorContact,lineageNum,lineageName
12345678,BARCODE,Jones,Douglas,1890-01-01,Oxford,Sputum,ABDH615D!,1916-12-25; 15:33,Pulmonary,MGIT Cultured Isolate,Oxford,1917-01-03,No words needed,Doppelganglius Bob,Dr. Requestor Name,req_contact@genome.com,2.2.1,East-Asian Beijing
23456789,BARCODE,Cole,Gordon,1862-12-12,Cambridge,Sputum,ABD7895715,1916-12-26; 14:22,Pulmonary,MGIT Cultured Isolate,Oxford,1917-01-06,I'm worried about coup,Mycobacterium tuberculosis,Dr. Requestor Name,req_contact@genome.com,2.2.1,East-Asian Beijing
34567890,BARCODE,Evans,Diane,1887-04-04,London,Sputum,917BAHDYB1,1916-12-30; 18:45,Pulmonary,MGIT Cultured Isolate,Oxford,1917-01-09,No additional comments,Mycobacterium tuberculosis,Dr. Requestor Name,req_contact@genome.com,2.2.1,East-Asian Beijing
45678901,BARCODE,Brennan,Andy,1877-05-26,London,Sputum,10DBFH162784,1917-01-01' 08:30,Pulmonary,MGIT Cultured Isolate,Oxford,1917-01-11,No additional comments,Mycobacterium tuberculosis,Dr. Requestor Name,req_contact@genome.com,2.2.1,East-Asian Beijing

Run,Sample_Name,SRA_Study,Organism,gender,Library,sample_type,source,cell_type
SRR4047245,GSM2286986,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047246,GSM2286987,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047247,GSM2286988,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047248,GSM2286989,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047249,GSM2286990,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047250,GSM2286991,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047251,GSM2286992,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047252,GSM2286993,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047253,GSM2286994,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047254,GSM2286995,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047255,GSM2286996,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047256,GSM2286997,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047257,GSM2286998,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047258,GSM2286999,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047259,GSM2287000,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047260,GSM2287001,SRP082522,Homo_sapiens,male,SINGLE,Pooled,iPSC-derived neural progenitor cells,NPC
SRR4047261,GSM2287002,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047262,GSM2287003,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047263,GSM2287004,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047264,GSM2287005,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047265,GSM2287006,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047266,GSM2287007,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047267,GSM2287008,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047268,GSM2287009,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047269,GSM2287010,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047270,GSM2287011,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047271,GSM2287012,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047272,GSM2287013,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047273,GSM2287014,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047274,GSM2287015,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047275,GSM2287016,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047276,GSM2287017,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047277,GSM2287018,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047278,GSM2287019,SRP082522,Homo_sapiens,male,SINGLE,Pooled,iPSC-derived neural progenitor cells,NPC
SRR4047279,GSM2287020,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047280,GSM2287021,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047281,GSM2287022,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047282,GSM2287023,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047283,GSM2287024,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047284,GSM2287025,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047285,GSM2287026,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047286,GSM2287027,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047287,GSM2287028,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047288,GSM2287029,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047289,GSM2287030,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047290,GSM2287031,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047291,GSM2287032,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047292,GSM2287033,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047293,GSM2287034,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047294,GSM2287035,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047295,GSM2287036,SRP082522,Homo_sapiens,male,PAIRED,Pooled,iPSC-derived motor neurons,MN
SRR4047296,GSM2287037,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047297,GSM2287038,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047298,GSM2287039,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047299,GSM2287040,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047300,GSM2287041,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047301,GSM2287042,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047302,GSM2287043,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047303,GSM2287044,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047304,GSM2287045,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047305,GSM2287046,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047306,GSM2287047,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047307,GSM2287048,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047308,GSM2287049,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047309,GSM2287050,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047310,GSM2287051,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047311,GSM2287052,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047312,GSM2287053,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047313,GSM2287054,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047314,GSM2287055,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047315,GSM2287056,SRP082522,Homo_sapiens,male,PAIRED,Pooled,iPSC-derived motor neurons,MN
SRR4047316,GSM2287057,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047317,GSM2287058,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047318,GSM2287059,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047319,GSM2287060,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047320,GSM2287061,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047321,GSM2287062,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047322,GSM2287063,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047323,GSM2287064,SRP082522,Homo_sapiens,male,PAIRED,Pooled,iPSC-derived motor neurons,MN
SRR4047324,GSM2287065,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047325,GSM2287066,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047326,GSM2287067,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047327,GSM2287068,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047328,GSM2287069,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047329,GSM2287070,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047330,GSM2287071,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047331,GSM2287072,SRP082522,Homo_sapiens,male,PAIRED,Pooled,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047332,GSM2287073,SRP082522,Homo_sapiens,male,PAIRED,Pooled,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047333,GSM2287074,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047334,GSM2287075,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047335,GSM2287076,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047336,GSM2287077,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047337,GSM2287078,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047338,GSM2287079,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047339,GSM2287080,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047340,GSM2287081,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047341,GSM2287082,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047342,GSM2287083,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047343,GSM2287084,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047344,GSM2287085,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047345,GSM2287086,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047346,GSM2287087,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047347,GSM2287088,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047348,GSM2287089,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047349,GSM2287090,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047350,GSM2287091,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047351,GSM2287092,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047352,GSM2287093,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047353,GSM2287094,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047354,GSM2287095,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047355,GSM2287096,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047356,GSM2287097,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047357,GSM2287098,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047358,GSM2287099,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047359,GSM2287100,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047360,GSM2287101,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047361,GSM2287102,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047362,GSM2287103,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047363,GSM2287104,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047364,GSM2287105,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047365,GSM2287106,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047366,GSM2287107,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047367,GSM2287108,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047368,GSM2287109,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047369,GSM2287110,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047370,GSM2287111,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047371,GSM2287112,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047372,GSM2287113,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047373,GSM2287114,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047374,GSM2287115,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047375,GSM2287116,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047376,GSM2287117,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047377,GSM2287118,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047378,GSM2287119,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047379,GSM2287120,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047380,GSM2287121,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047381,GSM2287122,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047382,GSM2287123,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047383,GSM2287124,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047384,GSM2287125,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047385,GSM2287126,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047386,GSM2287127,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047387,GSM2287128,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047388,GSM2287129,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047389,GSM2287130,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047390,GSM2287131,SRP082522,Homo_sapiens,male,PAIRED,Pooled,iPSC-derived neural progenitor cells,NPC
SRR4047391,GSM2287132,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047392,GSM2287133,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047393,GSM2287134,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047394,GSM2287135,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047395,GSM2287136,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047396,GSM2287137,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047397,GSM2287138,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047398,GSM2287139,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047399,GSM2287140,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047400,GSM2287141,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047401,GSM2287142,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047402,GSM2287143,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047403,GSM2287144,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047404,GSM2287145,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047405,GSM2287146,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047406,GSM2287147,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047407,GSM2287148,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047408,GSM2287149,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047409,GSM2287150,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047410,GSM2287151,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047411,GSM2287152,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047412,GSM2287153,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047413,GSM2287154,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047414,GSM2287155,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047415,GSM2287156,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047416,GSM2287157,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047417,GSM2287158,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047418,GSM2287159,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047419,GSM2287160,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047420,GSM2287161,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047421,GSM2287162,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047422,GSM2287163,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047423,GSM2287164,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047424,GSM2287165,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047425,GSM2287166,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047426,GSM2287167,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047427,GSM2287168,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047428,GSM2287169,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047429,GSM2287170,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047430,GSM2287171,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047431,GSM2287172,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047432,GSM2287173,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047433,GSM2287174,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047434,GSM2287175,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047435,GSM2287176,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047436,GSM2287177,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047437,GSM2287178,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047438,GSM2287179,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047439,GSM2287180,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047440,GSM2287181,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047441,GSM2287182,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047442,GSM2287183,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047443,GSM2287184,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047444,GSM2287185,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047445,GSM2287186,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047446,GSM2287187,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047447,GSM2287188,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047448,GSM2287189,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047449,GSM2287190,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047450,GSM2287191,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047451,GSM2287192,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047452,GSM2287193,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047453,GSM2287194,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047454,GSM2287195,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047455,GSM2287196,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047456,GSM2287197,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047457,GSM2287198,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047458,GSM2287199,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC


,description,help,id,inputs,name,outputs
0,Maps BLAST results to GO annotation terms,This runs b2g4Pipe v2 5  which is the command line  no GUI  version of Blast2GO designed for use in pipelines ,blast2go,blastxml,Blast2GO,tabular
1,from two FASTA files,Takes two FASTA files   species A  and  species B    builds a BLAST database for each  runs reciprocal BLAST searchs   A vs B   and  B vs A    optionally filters the HSPs  and then compiles a list of the reciprocal best hits  RBH  ,blast_reciprocal_best_hits,fasta,BLAST Reciprocal Best Hits (RBH),tabular
2,Make a table from BLAST output,NCBI BLAST   and the older NCBI  legacy  BLAST  can output in a range of formats including text  tabular and a more detailed XML format  You can do a lot of things with tabular files in Galaxy  sorting  filtering  joins  etc   however until BLAST  2 2 28 the tabular output never included the hit descriptions  titles  found in the other output formats,blastxml_to_top_descr,"blastxml,tabular",BLAST top hit descriptions,tabular
3,Convert BLAST XML output to tabular,NCBI BLAST   and the older NCBI  legacy  BLAST  can output in a range of formats including tabular and a more detailed XML format  A complex workflow may need both the XML and the tabular output   but running BLAST twice is slow and wasteful ,blastxml_to_tabular,blastxml,BLAST XML to tabular,tabular
4,Show BLAST database information from blastdbcmd,Calls the NCBI BLAST  blastdbcmd command line tool with the  info switch to give summary information about a BLAST database  such as the size  number of sequences and total length  and date ,ncbi_blastdbcmd_info,,NCBI BLAST+ database info,txt
5,Extract sequence(s) from BLAST database,Extracts FASTA formatted sequences from a BLAST database using the NCBI BLAST  blastdbcmd command line tool ,ncbi_blastdbcmd_wrapper,"txt,tabular",NCBI BLAST+ blastdbcmd entry(s),fasta
6,Search nucleotide database with nucleotide query sequence(s),Search a  nucleotide database  using a  nucleotide query   using the NCBI BLAST  blastn command line tool  Algorithms include blastn  megablast  and discontiguous megablast ,ncbi_blastn_wrapper,fasta,NCBI BLAST+ blastn,tabular
7,Search protein database with protein query sequence(s),Search a  protein database  using a  protein query   using the NCBI BLAST  blastp command line tool ,ncbi_blastp_wrapper,fasta,NCBI BLAST+ blastp,tabular
8,Search protein database with translated nucleotide query sequence(s),Search a  protein database  using a  translated nucleotide query   using the NCBI BLAST  blastx command line tool ,ncbi_blastx_wrapper,fasta,NCBI BLAST+ blastx,tabular
9,Convert masking information in lower-case masked FASTA input to file formats suitable for makeblastdb,Convert masking information in lower case masked FASTA input to file formats suitable for makeblastdb ,ncbi_convert2blastmask_wrapper,fasta,NCBI BLAST+ convert2blastmask,maskinfo-asn1
10,Search protein database with protein query sequence(s),Search a  protein database  using a  protein query   using the NCBI BLAST  deltablast command line tool  Domain Enhanced Lookup Time Accelerated BLAST  DELTA BLAST  ,ncbi_deltablast_wrapper,fasta,NCBI BLAST+ deltablast,tabular
11,masks low complexity regions,This tool identifies and masks out low complexity regions of a nucleotide database  or sequences in FASTA format  by using the symmetric DUST  algorithm ,ncbi_dustmasker_wrapper,,NCBI BLAST+ dustmasker,maskinfo-asn1
12,Make BLAST database,Make BLAST database from one or more FASTA files and or BLAST databases ,ncbi_makeblastdb,"fasta,maskinfo-asn1,maskinfo-asn1-binary",NCBI BLAST+ makeblastdb,data
13,Make profile database,Make a protein domain profile database  for use with RPS BLAST or RSP TBLASTN  from one or more Position Specific Scoring Matrices  PSSM  files in the NCBI  scoremat  ASN 1 format  usually named     smp    ,ncbi_makeprofiledb,pssm-asn1,NCBI BLAST+ makeprofiledb,blastdbd
14,Search protein database with protein query sequence(s),Runs the Position Specific Initiated BLAST tool   psiblast   ,ncbi_psiblast_wrapper,"fasta,msa,phylip,pssm",NCBI BLAST+ psiblast,"tabular,txt,pssm"
15,Search protein domain database (PSSMs) with protein query sequence(s),Search a  protein domain database  using a  protein query   using the NCBI BLAST  rpsblast command line tool ,ncbi_rpsblast_wrapper,fasta,NCBI BLAST+ rpsblast,tabular
16,Search protein domain database (PSSMs) with translated nucleotide query sequence(s),Search a  protein domain database  using a  nucleotide query   using the NCBI BLAST  rpstblastn command line tool ,ncbi_rpstblastn_wrapper,fasta,NCBI BLAST+ rpstblastn,tabular
17,low-complexity regions in protein sequences,This tool identifies and masks out low complexity regions of a protein database  or proteins in FASTA format  by using the SEG  algorithm ,ncbi_segmasker_wrapper,,NCBI BLAST+ segmasker,maskinfo-asn1
18,Search translated nucleotide database with protein query sequence(s),Search a  translated nucleotide database  using a  protein query   using the NCBI BLAST  tblastn command line tool ,ncbi_tblastn_wrapper,fasta,NCBI BLAST+ tblastn,tabular
19,Search translated nucleotide database with translated nucleotide query sequence(s),Search a  translated nucleotide database  using a  translated nucleotide query   using the NCBI BLAST  tblastx command line tool ,ncbi_tblastx_wrapper,fasta,NCBI BLAST+ tblastx,tabular
20,from BLAST output or similar data,Takes two tabular search results files  A against B  and B against A  and compiles a list of the reciprocal best hits  RBH  ,reciprocal_best_hits,tabular,BLAST Reciprocal Best Hits (RBH),tabular
21,Gives a codon aware alignment,Takes an input file of aligned protein sequences  typically FASTA or Clustal format   and a matching file of unaligned nucleotide sequences  FASTA format  using the same identifiers   and threads the nucleotide sequences onto the protein alignment to produce a codon aware nucleotide alignment   which can be viewed as a back translation ,align_back_trans,"fasta,clustal,fasta",Thread nucleotides onto a protein alignment (back-translation),
22,from simple locus annotation,Draws a  Chromosome Diagram   with one vertical bar for each sequence in the reference FASTA file which is expected to contain one sequence per chromosome or pseudomolecule  annotated with the positions and captions given in the tabular annotation file ,chromosome_diagram,"fasta,tabular",Chromosome Diagram,pdf
23,Assembles reads giving a FASTA file,Runs the   clc assembler   tool giving a FASTA output file  You would then typically map the same set of reads onto this assembly using   cls mapper   to any perform downstream analysis using the mapped reads ,clc_assembler,"fastq,fasta",CLC assembler,fasta
24,Maps reads giving a SAM/BAM file,Runs the CLCbio tool   clc mapper   which produces a proprietary binary CAS format file  which is immediately processed using   clc cas to sam   to generate a self contained standard BAM file  which is then sorted and indexed using   samtools   ,clc_mapper,"fasta,fastqsanger,fasta",CLC Mapper,bam
25,Find nucleolar localization signals (NoLSs) in protein sequences,This calls the command line version of the NoD tool from the Barton Group for prediction of nucleolar localization sequences  NoLSs   The NoD tool uses an artificial neural network trained on a set of human NoLSs ,clinod,fasta,Nucleolar localization sequence Detector (NoD),tabular
26,using samtools view,This tool runs the command   samtools view   from the SAMtools toolkit  getting all the reads in your BAM file mapped to the given region of interest  ROI   It then counts all the different sequence variants in reads spanning that ROI  which are returned as a tab separated table ,count_roi_variants,bam,Count sequence variants in region of interest,tabular
27,using samtools idxstats and depth,This tool runs the commands   samtools idxstats   and   samtools depth   from the SAMtools toolkit  and parses their output to produce a consise summary of the coverage information for each reference sequence ,coverage_stats,bam,BAM coverage statistics,tabular
28,Find bacterial effectors in protein sequences,This calls the command line Effective T3 v1 0 1 tool for prediction of bacterial effector proteins ,effectiveT3,fasta,Effective T3,tabular
29,from a tabular file,By default it divides a FASTA file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,fasta_filter_by_id,"fasta,tabular",Filter FASTA by ID,fasta
30,from a tabular file,By default it divides a FASTQ file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,fastq_filter_by_id,"fastq,tabular",Filter FASTQ by ID,
31,using the read name suffices,Using the common read name suffix conventions  it identifies paired reads in FASTQ files  This output can be used to recover missing partners if you have the original data ,fastq_pair_names,fastq,Identify paired reads in FASTQ files,tabular
32,using the read name suffices,Using the common read name suffix conventions  it divides a FASTQ file into paired reads  and orphan or single reads ,fastq_paired_unpaired,foobar,Divide FASTQ file into paired and unpaired reads,
33,e.g. to get peptides from ESTs,Takes an input file of nucleotide sequences  typically FASTA  but also FASTQ and Standard Flowgram Format  SFF  are supported   and searches each sequence for open reading frames  ORFs  or potential coding sequences  CDSs  of the given minimum length  These are returned as FASTA files of nucleotides and protein sequences ,get_orfs_or_cdss,"fasta,fastq,sff",Get open reading frames (ORFs) or coding sequences (CDSs),"fasta,bed6,gff3"
34,Interproscan functional predictions of ORFs,    Interproscan    Interproscan is a batch tool to query the Interpro database  It provides annotations based on multiple searches of profile and other functional databases  These include SCOP  CATH  PFAM and SUPERFAMILY  Currently due to resource limitations  only the PFAM database is searched however,interproscan,fasta,Interproscan functional predictions of ORFs,tabular
35,Combine mummer/nucmer/promer with mummerplot,Takes two FASTA files   species A  and  species B    compares them using one of the MUMmer 3 tools    mummer      nucmer    or   promer     checking both strands  and then draws a dotplot using   mummerplot   ,mummerplot_wrapper,fasta,MUMmer dotplot,"pdf,png"
36,Find nuclear localization signals (NLSs) in protein sequences,This calls the NLStradamus tool for prediction of nuclear localization signals  NLSs   which uses a Hidden Markov Model  HMM  ,nlstradamus,fasta,NLStradamus,tabular
37,Find nuclear localization signals (NLSs) in protein sequences,This calls a Python re implementation of the PredictNLS tool for prediction of nuclear localization signals  NLSs   which works by looking for matches to a known set of patterns  described using regular expressions  ,predictnls,fasta,PredictNLS,tabular
38,Find eukaryotic PolII promoters in DNA sequences,This calls the Promoter 2 0 tool for prediction of eukaryotic PolII promoter sequences using a Neural Network  NN  model ,promoter2,fasta,Promoter 2.0,tabular
39,Determines sub-cellular localisation of bacterial/archaeal protein sequences,This calls the command line tool PSORTb v3 0 for prediction of prokaryotic localization sites  The input dataset needs to be protein FASTA sequences  The default output is a simple tabular file with three columns  one row per query sequence ,Psortb,fasta,psortb,tabular
40,Find RXLR Effectors of Plant Pathogenic Oomycetes,Takes a protein sequence FASTA file as input  and produces a simple tabular file as output with one line per protein  and two columns giving the sequence ID and the predicted class  This is typically just whether or not it had the selected RXLR motif  Y or N  ,rxlr_motifs,fasta,RXLR Motifs,tabular
41,Find signal peptides in protein sequences,This calls the SignalP v3 0 tool for prediction of signal peptides  which uses both a Neural Network  NN  and Hidden Markov Model  HMM  to produce two sets of scores ,signalp3,fasta,SignalP 3.0,tabular
42,Find transmembrane domains in protein sequences,This calls the TMHMM v2 0 tool for prediction of transmembrane  TM   helices in proteins using a hidden Markov model  HMM  ,tmhmm2,fasta,TMHMM 2.0,tabular
43,Eukaryote protein subcellular localization prediction,This calls the WoLF PSORT tool for prediction of eukaryote protein subcellular localization ,wolf_psort,fasta,WoLF PSORT,tabular
44,e.g. to reduce coverage,Takes an input file of sequences  typically FASTA or FASTQ  but also Standard Flowgram Format  SFF  is supported   and returns a new sequence file sub sampling uniformly from this  in the same format  preserving the input order and selecting sequencing evenly though the input file  ,sample_seqs,"fasta,fastq,sff",Sub-sample sequences files,
45,samtools bam2fq,This tool runs the   samtools bam2fq   command in the SAMtools toolkit ,samtools_bam2fq,"bam,sam",Convert BAM to FASTQ,fastqsanger
46,samtools depad,This tool runs the   samtools depad   command in the SAMtools toolkit ,samtools_depad,"fasta,sam,bam",Depad SAM/BAM file,bam
47,samtools depth,This tool runs the   samtools depth   command in the SAMtools toolkit ,samtools_depth,"bam,sam",SAM/BAM coverage depth,tabular
48,samtools idxstats,This tool runs the   samtools idxstats   command in the SAMtools toolkit ,samtools_idxstats,bam,BAM mapping statistics,tabular
49,Count bases or amino-acids,Takes input files of sequences  typically FASTA or FASTQ  but also Standard Flowgram Format  SFF  is supported   counts all the letters in each sequence  and returns a summary table of their counts and percentages ,seq_composition,"fasta,fastq,sff",Sequence composition,tabular
50,from a tabular file,By default it divides a FASTA  FASTQ or Standard Flowgram Format  SFF  file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,seq_filter_by_id,"fasta,fastq,sff,tabular",Filter sequences by ID,
51,from SAM/BAM file,By default it divides a FASTA  FASTQ or Standard Flowgram Format  SFF  file in two  those sequences  or read pairs  which do or don t map in the provided SAM BAM file  You can opt to have a single output file of just the mapping reads  or just the non mapping ones ,seq_filter_by_mapping,"fasta,fastq,sff,sam,bam",Filter sequences by mapping,
52,Trim off 5' or 3' primers,Looks for the given primer sequences  within the existing clipped sequence  and further clips the reads to remove the primers and any preceding trailing sequence ,seq_primer_clip,"fasta,fastq,sff,fasta",Primer clip sequences,
53,with ID mapping from a tabular file,Takes a FASTA  QUAL  FASTQ or Standard Flowgram Format  SFF  file and produces a new sequence file  of the same format  where the sequence identifiers have been renamed according to the specified columns in your tabular file ,seq_rename,"fasta,qual,fastq,sff,tabular",Rename sequences,
54,from a tabular file,Takes a FASTA  QUAL  FASTQ or Standard Flowgram Format  SFF  file and produces a new sequence file  of the same format  containing only the records with identifiers in the tabular file  in the order from the tabular file  ,seq_select_by_id,"fasta,qual,fastq,sff,tabular",Select sequences by ID,
55,from lists,Draws Venn Diagram for one  two or three sets  as a PDF file  ,venn_list,"tabular,fasta,fastq,sff",Venn Diagram,pdf
56,Gives a codon aware alignment,Takes an input file of aligned protein sequences  typically FASTA or Clustal format   and a matching file of unaligned nucleotide sequences  FASTA format  using the same identifiers   and threads the nucleotide sequences onto the protein alignment to produce a codon aware nucleotide alignment   which can be viewed as a back translation ,align_back_trans,"fasta,clustal,fasta",Thread nucleotides onto a protein alignment (back-translation),
57,from simple locus annotation,Draws a  Chromosome Diagram   with one vertical bar for each sequence in the reference FASTA file which is expected to contain one sequence per chromosome or pseudomolecule  annotated with the positions and captions given in the tabular annotation file ,chromosome_diagram,"fasta,tabular",Chromosome Diagram,pdf
58,Assembles reads giving a FASTA file,Runs the   clc assembler   tool giving a FASTA output file  You would then typically map the same set of reads onto this assembly using   cls mapper   to any perform downstream analysis using the mapped reads ,clc_assembler,"fastq,fasta",CLC assembler,fasta
59,Maps reads giving a SAM/BAM file,Runs the CLCbio tool   clc mapper   which produces a proprietary binary CAS format file  which is immediately processed using   clc cas to sam   to generate a self contained standard BAM file  which is then sorted and indexed using   samtools   ,clc_mapper,"fasta,fastqsanger,fasta",CLC Mapper,bam
60,Find nucleolar localization signals (NoLSs) in protein sequences,This calls the command line version of the NoD tool from the Barton Group for prediction of nucleolar localization sequences  NoLSs   The NoD tool uses an artificial neural network trained on a set of human NoLSs ,clinod,fasta,Nucleolar localization sequence Detector (NoD),tabular
61,using samtools view,This tool runs the command   samtools view   from the SAMtools toolkit  getting all the reads in your BAM file mapped to the given region of interest  ROI   It then counts all the different sequence variants in reads spanning that ROI  which are returned as a tab separated table ,count_roi_variants,bam,Count sequence variants in region of interest,tabular
62,using samtools idxstats and depth,This tool runs the commands   samtools idxstats   and   samtools depth   from the SAMtools toolkit  and parses their output to produce a consise summary of the coverage information for each reference sequence ,coverage_stats,bam,BAM coverage statistics,tabular
63,Find bacterial effectors in protein sequences,This calls the command line Effective T3 v1 0 1 tool for prediction of bacterial effector proteins ,effectiveT3,fasta,Effective T3,tabular
64,from a tabular file,By default it divides a FASTA file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,fasta_filter_by_id,"fasta,tabular",Filter FASTA by ID,fasta
65,from a tabular file,By default it divides a FASTQ file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,fastq_filter_by_id,"fastq,tabular",Filter FASTQ by ID,
66,using the read name suffices,Using the common read name suffix conventions  it identifies paired reads in FASTQ files  This output can be used to recover missing partners if you have the original data ,fastq_pair_names,fastq,Identify paired reads in FASTQ files,tabular
67,using the read name suffices,Using the common read name suffix conventions  it divides a FASTQ file into paired reads  and orphan or single reads ,fastq_paired_unpaired,foobar,Divide FASTQ file into paired and unpaired reads,
68,e.g. to get peptides from ESTs,Takes an input file of nucleotide sequences  typically FASTA  but also FASTQ and Standard Flowgram Format  SFF  are supported   and searches each sequence for open reading frames  ORFs  or potential coding sequences  CDSs  of the given minimum length  These are returned as FASTA files of nucleotides and protein sequences ,get_orfs_or_cdss,"fasta,fastq,sff",Get open reading frames (ORFs) or coding sequences (CDSs),"fasta,bed6,gff3"
69,Interproscan functional predictions of ORFs,    Interproscan    Interproscan is a batch tool to query the Interpro database  It provides annotations based on multiple searches of profile and other functional databases  These include SCOP  CATH  PFAM and SUPERFAMILY  Currently due to resource limitations  only the PFAM database is searched however,interproscan,fasta,Interproscan functional predictions of ORFs,tabular
70,Combine mummer/nucmer/promer with mummerplot,Takes two FASTA files   species A  and  species B    compares them using one of the MUMmer 3 tools    mummer      nucmer    or   promer     checking both strands  and then draws a dotplot using   mummerplot   ,mummerplot_wrapper,fasta,MUMmer dotplot,"pdf,png"
71,Find nuclear localization signals (NLSs) in protein sequences,This calls the NLStradamus tool for prediction of nuclear localization signals  NLSs   which uses a Hidden Markov Model  HMM  ,nlstradamus,fasta,NLStradamus,tabular
72,Find nuclear localization signals (NLSs) in protein sequences,This calls a Python re implementation of the PredictNLS tool for prediction of nuclear localization signals  NLSs   which works by looking for matches to a known set of patterns  described using regular expressions  ,predictnls,fasta,PredictNLS,tabular
73,Find eukaryotic PolII promoters in DNA sequences,This calls the Promoter 2 0 tool for prediction of eukaryotic PolII promoter sequences using a Neural Network  NN  model ,promoter2,fasta,Promoter 2.0,tabular
74,Determines sub-cellular localisation of bacterial/archaeal protein sequences,This calls the command line tool PSORTb v3 0 for prediction of prokaryotic localization sites  The input dataset needs to be protein FASTA sequences  The default output is a simple tabular file with three columns  one row per query sequence ,Psortb,fasta,psortb,tabular
75,Find RXLR Effectors of Plant Pathogenic Oomycetes,Takes a protein sequence FASTA file as input  and produces a simple tabular file as output with one line per protein  and two columns giving the sequence ID and the predicted class  This is typically just whether or not it had the selected RXLR motif  Y or N  ,rxlr_motifs,fasta,RXLR Motifs,tabular
76,Find signal peptides in protein sequences,This calls the SignalP v3 0 tool for prediction of signal peptides  which uses both a Neural Network  NN  and Hidden Markov Model  HMM  to produce two sets of scores ,signalp3,fasta,SignalP 3.0,tabular
77,Find transmembrane domains in protein sequences,This calls the TMHMM v2 0 tool for prediction of transmembrane  TM   helices in proteins using a hidden Markov model  HMM  ,tmhmm2,fasta,TMHMM 2.0,tabular
78,Eukaryote protein subcellular localization prediction,This calls the WoLF PSORT tool for prediction of eukaryote protein subcellular localization ,wolf_psort,fasta,WoLF PSORT,tabular
79,e.g. to reduce coverage,Takes an input file of sequences  typically FASTA or FASTQ  but also Standard Flowgram Format  SFF  is supported   and returns a new sequence file sub sampling uniformly from this  in the same format  preserving the input order and selecting sequencing evenly though the input file  ,sample_seqs,"fasta,fastq,sff",Sub-sample sequences files,
80,samtools bam2fq,This tool runs the   samtools bam2fq   command in the SAMtools toolkit ,samtools_bam2fq,"bam,sam",Convert BAM to FASTQ,fastqsanger
81,samtools depad,This tool runs the   samtools depad   command in the SAMtools toolkit ,samtools_depad,"fasta,sam,bam",Depad SAM/BAM file,bam
82,samtools depth,This tool runs the   samtools depth   command in the SAMtools toolkit ,samtools_depth,"bam,sam",SAM/BAM coverage depth,tabular
83,samtools idxstats,This tool runs the   samtools idxstats   command in the SAMtools toolkit ,samtools_idxstats,bam,BAM mapping statistics,tabular
84,Count bases or amino-acids,Takes input files of sequences  typically FASTA or FASTQ  but also Standard Flowgram Format  SFF  is supported   counts all the letters in each sequence  and returns a summary table of their counts and percentages ,seq_composition,"fasta,fastq,sff",Sequence composition,tabular
85,from a tabular file,By default it divides a FASTA  FASTQ or Standard Flowgram Format  SFF  file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,seq_filter_by_id,"fasta,fastq,sff,tabular",Filter sequences by ID,
86,from SAM/BAM file,By default it divides a FASTA  FASTQ or Standard Flowgram Format  SFF  file in two  those sequences  or read pairs  which do or don t map in the provided SAM BAM file  You can opt to have a single output file of just the mapping reads  or just the non mapping ones ,seq_filter_by_mapping,"fasta,fastq,sff,sam,bam",Filter sequences by mapping,
87,Trim off 5' or 3' primers,Looks for the given primer sequences  within the existing clipped sequence  and further clips the reads to remove the primers and any preceding trailing sequence ,seq_primer_clip,"fasta,fastq,sff,fasta",Primer clip sequences,
88,with ID mapping from a tabular file,Takes a FASTA  QUAL  FASTQ or Standard Flowgram Format  SFF  file and produces a new sequence file  of the same format  where the sequence identifiers have been renamed according to the specified columns in your tabular file ,seq_rename,"fasta,qual,fastq,sff,tabular",Rename sequences,
89,from a tabular file,Takes a FASTA  QUAL  FASTQ or Standard Flowgram Format  SFF  file and produces a new sequence file  of the same format  containing only the records with identifiers in the tabular file  in the order from the tabular file  ,seq_select_by_id,"fasta,qual,fastq,sff,tabular",Select sequences by ID,
90,from lists,Draws Venn Diagram for one  two or three sets  as a PDF file  ,venn_list,"tabular,fasta,fastq,sff",Venn Diagram,pdf
91,"Takes Sanger, Roche, Illumina, and Ion Torrent data",Runs MIRA v3 4  collects the output  and throws away all the temporary files ,mira_assembler,"fasta,fastq",Assemble with MIRA v3.4,"fasta,qual454,txt,wig"
92,Filter reads using kmer matches,Runs the   mirabait   utility from MIRA v4 0 to filter your input reads according to whether or not they contain perfect kmer matches to your bait file  By default this looks for 31 mers  kmers or  k  mers where the fragment length  k  is 31   and only requires a single matching kmer ,mira_4_0_bait,"fasta,fastq,mira",MIRA v4.0 mirabait,
93,Convert MIRA assembly to FASTA/SAM/BAM,Runs the   miraconvert   utility from MIRA v4 0 to filter and or convert a MIRA Assembly Format file produced by a  mapping  or  de novo  assembly ,mira_4_0_convert,mira,MIRA v4.0 miraconvert,"mira,fasta,bam,tabular"
94,"Takes Sanger, Roche 454, Solexa/Illumina, Ion Torrent and PacBio reads",Runs MIRA v4 0 in de novo mode  collects the output  generates a sorted BAM file  and then throws away all the temporary files ,mira_4_0_de_novo,"fastq,mira",MIRA v4.0 de novo assember,"fasta,bam,mira,txt"
95,"Maps Sanger, Roche 454, Solexa/Illumina, Ion Torrent and PacBio reads",Runs MIRA v4 0 in mapping mode  collects the output  generates a sorted BAM file  and throws away all the temporary files ,mira_4_0_mapping,"fasta,fastq,mira,fastq,mira",MIRA v4.0 mapping,"fasta,bam,mira,txt"
96,Filter reads using kmer matches,Runs the   mirabait   utility from MIRA v4 9 to filter your input reads according to whether or not they contain perfect kmer matches to your bait file  By default this looks for 31 mers  kmers or  k  mers where the fragment length  k  is 31   and only requires a single matching kmer ,mira_4_9_bait,"fasta,fastq,mira,fastq,fasta,fasta,fastq",MIRA v4.9 mirabait,
97,from expression,Adds a surface field to a selected shape based on a given mathematical expression consisting of variables x  y  z  shape point coordinates  and t  time    This tool will generate VTK POLYDATA files  so input PLY files or VTK files with a different dataset type will automatically be converted to VTK POLYDATA during tool execution ,icqsol_add_surface_field_from_expression,"plyascii,plybinary,vtkascii,vtkbinary",Add surface field,vtkascii
98,to shape,Adds a texture by applying an image to the surface of a shape   The shape is projected onto a bounding box and the color is selected by flattening the box to fit the image   Refinement can be applied for a smoother result ,icqsol_add_texture,"vtkascii,vtkbinary,jpg,png",Add texture,vtkascii
99,,Coarsens a shape by ensuring that cells are larger than a given tolerance  resulting in a less detailed shape ,icqsol_coarsen_shape,"plyascii,plybinary,vtkascii,vtkbinary",Coarsen shape,vtkascii
100,field,Colors a shape s selected surface field using a selected color map   This tool will restrict selected input shapes to only those that have at least one surface field ,icqsol_color_surface_field,"vtkascii,vtkbinary",Color,
101,,Creates a shape composed of any number of selected shapes where the composition is based on a mathematical expression consisting of              and       operations   The       results in a union of shapes  the       operator removes a shape and the       operator results in an intersection of shapes ,icqsol_compose_shapes,"plyascii,plybinary,vtkascii,vtkbinary",Compose shapes,vtkascii
102,,  Create a shape     creates a selected primitive shape where shapes are Box  Cone  Cylinder and Sphere ,icqsol_create_shape,"plyascii,plybinary,vtkascii,vtkbinary",Create shape,vtkascii
103,,Refines a shape by limiting all edges to a specified length  resulting in a more detailed shape ,icqsol_refine_shape,"plyascii,plybinary,vtkascii,vtkbinary",Refine shape,vtkascii
104,,Applies a rotation to a shape by a given angle about an arbitrary axis ,icqsol_rotate_shape,"plyascii,plybinary,vtkascii,vtkbinary",Rotate shape,vtkascii
105,,Magnifies the dimensions of a shape along the X  Y and Z directions ,icqsol_scale_shape,"plyascii,plybinary,vtkascii,vtkbinary",Scale shape,vtkascii
106,- computes the jump of normal electric field,Computes the jump in flux like  Neumann  boundary conditions given prescribed Dirichlet boundary conditions by using the boundary element method   Depending on the problem  the jump can be the surface flux or the normal electric field in electrostatic problems  The Dirichlet field is often called the potential  e g,icqsol_solve_laplace,"vtkascii,vtkbinary",Solve Laplace equation,
107,,Applies translation operations to a shape by adding a displacement to each coordinate ,icqsol_translate_shape,"plyascii,plybinary,vtkascii,vtkbinary",Translate shape,vtkascii
108,using REST API,Retrieve feature information in JSON format from Ensembl using its REST API ,get_feature_info,txt,Get features by Ensembl ID,json
109,using REST API,Retrieve a gene tree from Ensembl using its REST API ,get_genetree,,Get gene tree by Ensembl ID,json
110,using REST API,Retrieves FASTA sequences from Ensembl using its REST API ,get_sequences,txt,Get sequences by Ensembl ID,fasta
111,generates an SQLite database that can be visualised with Aequatus,  Simple tool to generate an SQLite database that can be visualised with  Aequatus     Aequatus is an open source homology browser developed with novel rendering approaches to visualise homologous  orthologous and paralogous gene structures   N B,gafa,"nhx,fasta,sqlite",Gene Align and Family Aggregator,gafa.sqlite
112, Compiles network from list of genes, MultiPEN includes a Wrapper to use the R package STRINGdb  bioconductor   Search Tool for the Retrieval of Interacting Proteins database  see  org packages release bioc html STRINGdb html       ,MultiPEN-StringDBNetwork,tabular,StringDB Network,txt
113, to select the best lambda for MultiPEN (regularisation parameter) , The performance of MultiPEN depends on the lambda parameter  Cross validation is used to select the best lambda  by providing statistics such as the largest connected component  the number of selected features and the area under the curve  To see the documentation for MultiPEN visit  com TGAC MultiPEN ,MultiPEN-cross-validation,"tabular,txt",Cross Validation,txt
114, (enrichment with Gene Ontology), MultiPEN includes a Wrapper to use the R package clusterProfiler to perform over representation analysis with Gene Ontology      ,MultiPEN-enrichment-GO,tabular,Enrichment with GO,"txt,pdf"
115, (enrichment with KEGG), MultiPEN includes a Wrapper to use the R package ClusterProfiler  Yu et al   2012  to perform over representation analysis with KEGG      ,MultiPEN-enrichment-KEGG,tabular,Enrichment with KEGG,"txt,pdf"
116,Feature selection from gene expression levels and/or metabolite levels, To see the documentation for MultiPEN visit  com TGAC MultiPEN       ,MultiPEN-feature-selection,"tabular,txt",Feature Selection,txt
117,Generate a phylogenetic tree using CDS alignment and species tree, TreeBeST    gene Tree Building guided by Species Tree  is a versatile program that builds  manipulates and displays phylogenetic trees  It is particularly designed for building gene trees with a known species tree and is highly efficient and accurate ,treebest_best,"nhx,fasta",TreeBeST best,nhx
118,Large-scale identification of similar protein pockets,             Description              APoc may be used to compare two pockets  a pocket against a set of pockets  or all against all between two sets of pockets  If you supply two structures to compare  the first structure is the template and the second structure is the query  or target    For each pair of structures  the program first performs a global structural comparison in sequential order using a standard TM align algoritm  One may elect to bypass the global alignment to accelerate comparison,apoc,"pdb,data",APoc,txt
119,"
        Convert 12- or 24-column BLAST output into 3-column hcluster_sg input
    ",  Simple tool to convert a 12  or 24 column BLAST output into a 3 column format  qseqid  sseqid  round  1   log10 evalue  2   usable as input for the hcluster sg tool       ,blast_parser,tabular,BLAST parser,tabular
120,generates the ETE sqlite DB from the NCBI taxdump.tar.gz, Generates the ETE sqlite data base from the NCBI taxdump tar gz using the  ,ete_init_taxdb,tar,ETE taxa DB generator,sqlite
121,from a list of species/taxids using the ETE Toolkit, Generates a table with lineage information for a list of species  also taxids and arbitrary taxons are accepted  using the     ETE Toolkit   org     Input       Species file  a single column tabular file     ETE3  Taxonomy Database  a sqlite database that has been created by ETE from the NCBI taxonomy dump    Options       Taxonomic levels  the columns to be incuded in the output table,ete_lineage_generator,"txt,sqlite",ETE lineage generator,tsv
122,"manipulates tree topology by rooting, pruning or sorting branches", Modify a given input tree using the etetoolkit   org      ,ete3_mod,nhx,ETE mod,nhx
123,from a list of species using the ETE Toolkit,      Generate a species tree from a list of species using the  ETE Toolkit         ETE Toolkit  ,ete_species_tree_generator,"txt,sqlite",ETE species tree generator,nhx
124,, Simple tool to copy datasets to a directory on the cluster      ,export_to_cluster,data,Export datasets to cluster,txt
125,converts data for the workflow,This tool converts a set of GFF3 and or JSON gene feature information datasets into SQLite format ,gstf_preparation,"gff3,json,fasta",GeneSeqToFamily preparation,"sqlite,fasta"
126,Hierarchically clustering on a sparse graph, Simple wrapper for  hcluster sg         hcluster sg  ,hcluster_sg,tabular,hcluster_sg,tabular
127,converts hcluster_sg 3-column output into lists of IDs,  A simple parser to convert the hcluster sg output into lists of IDs  one list for each cluster   When a minimum and or maximum number of cluster elements are specified  the IDs contained in the filtered out clusters are collected in the  discarded IDS  output dataset       ,hcluster_sg_parser,tabular,hcluster_sg parser,txt
128,finds potential target sites for miRNAs in genomic sequences,   miRanda   is an algorithm for the detection of potential microRNA target sites in genomic sequences   One or more miRNA sequences are scanned against all query sequences and potential target sites are reported  Potential target sites are identified using a two step strategy  First a dynamic programming local alignment is carried out between the query miRNA sequence and the reference sequence,miranda,fasta,miRanda,"txt,tabular"
129,Plot heatmap,It takes a list of genes based on set filtering criteria and draws them on heatmap ,plotheatmap,tabular,plotHeatmap,pdf
130,Binding Mode Prediction in Proteins/RNA, rDock   is a fast and versatile open source docking program that can be used to dock small molecules against proteins and nucleic acids  It is designed for High Throughput Virtual Screening  HTVS  campaigns and Binding Mode prediction studies ,rdock,"prm,mol2,sdf",rDock,tabular
131,in a tabular dataset using a mapping table,Replace chromosome names in a tabular  e g  VCF  dataset using a mapping table ,replace_chromosome_names,tabular,Replace chromosome names,
132,in RSAT Matrix Scan output,Filter the output generated by  RSAT Matrix Scan  tool to select only the  site  lines which contain a SNP in the sequence  according to the list of SNP positions provided ,rsat_filter_snps,"txt,tabular,tabular",Filter SNPs,tabular
133,Search domains in protein sequences using SMART, A simple tool to search domains in multiple protein sequences contained in a FASTA file using the  SMART   web service   Written by Ivica Letunic  ivica letunic com   Modified by Anil Thanki  Anil Thanki earlham,smart_domains,fasta,SMART domains,
134,multiple sequence alignment,This tool is a wrapper for the T Coffee multiple sequence alignment suite  The input is a set of sequences in FASTA format  Apart from running on the complete FASTA input  it can also run on a subset of sequences by providing a list of the FASTA IDs ,t_coffee,"fasta,txt",T-Coffee,"clustalw,nhx,fasta,msf,phyloxml,pir,ascii,html"
135,Prediction of microRNA targets,  Wrapper for the  TargetScan   pipeline to predict microRNA targets       TargetScan  ,targetscan,tabular,TargetScan,tabular
136,Summarise an assembly (e.g. N50 metrics),      Summarise assembly overview        This script is used to give summary statistics of an assembly or set of reads  Typically this is run after an assembly to evaluate gross features         Gives back        N50        num of contigs   1 kb        num of contigs        Read or Contig Histogram and graphs         Summed contig length  by number of contigs  in sorted order            ,assemblystats,fasta,assemblystats,"tabular,fasta,png"
137,"Generates a csv file containing stats at each position in the reference, for the selected alignment.",Generates a csv file containing stats at each position in the reference  for the selected alignment ,bam2mappingstats,"bam,fasta",BAM 2 Mapping Stats,csv
138,Download a collection of files,  This tool will bundle up files in a list collection into a downloadable zip file,bundle_collection,data,Bundle Collection,html
139,into single dataset in order of the collection,  Combines a list collection into a single file dataset with option to include dataset names or merge common header line    ,collapse_dataset,data,Collapse Collection,
140,Combines List Collection Assembly Statistics ,     ,combine_stats,,Combine AssemblyStats,tabular
141,Combine Tabular with same header, Concatenates tabular files into a single file  when they share the same header      ,combine,,Combine,tabular
142,Create Bed file from Multiple fasta file,     Create a bed file format using the start and end position of one or more fata record in a fasta file       ,fasta2bed,fasta,Fasta to Bed File,bed
143,Extract a single sequence from a fasta file.,   Fasta Extract Sequence   Extracts a fasta sequence from a multfasta by id  exact or partial   Latest author  Written by Philip Mabon     Public Health Agency of Canada  Original authors  Written by Torsten Seemann   Victorian Bioinformatics Consortium  Wrapped by Simon Gladman   Victorian Bioinformatics Consortium           Outputs in fasta format               Inputs   Fasta dataset  Sequence id     ,fa-extract-sequence,"fasta,txt",Fasta Extract Sequence,fasta
144,Provide a one line summary of a FastQC report(s),Inputs            Is this library single or paired end     Choose Single end or Paired end  This option will display the correct number of input fields depending on the option selected     Fastq input      Fastqc file     FastQC rawData input      This is the txt file produced by the FastQC tool     Sample Name    Sample name that will appear in the output file     Reference file or number of base pairs     Choose between providing a reference file or providing a number of basepairs to determine the raw genome coverage ,FastQC_Summary,"fastqsanger,fastq,txt,fasta",FastQC Summary,tabular
145,Automatically identify makers predictive of groups.,        feht                                                        feht   pronounced  fate   as the  eh  is Canadian                                                    A command line program to automatically identify markers predictive of groups  Can be used with binary data  genomic  single nucleotide variant  data  or arbitrary character data               File format              The program takes command line arguments  of which 2 are required    i   which specifies the information  eg  metadata  file  and   d   which specifies the data file,feht,"txt, csv",feht,tabular
146,Remove short and repeat contigs/scaffolds,                        What does it do                       Using the output of SPAdes  a fasta and a stats file  either from contigs or scaffolds   it filters the fasta files  discarding all sequences that are under a given length or under a calculated coverage  Repeated contigs are detected based on coverage                Output                  Filtered sequences  with repeats        Will contain the filtered contigs scaffolds including the repeats  These are the sequences that passed the length and minumum coverage cutoffs,filter_spades_repeat,"fasta,tabular",Filter SPAdes repeats,"fasta,txt"
147,Download MLST datasets by species from pubmlst.org,Searches a database for a given organism and returns the MLST Database fasta  and MLST Definitions tabular  ,getmlst,,getmlst,"fasta,tabular"
148,SNV Subtyping with genome assemblies or reads,                                                               bio hansel   Heidelberg And eNteritidis Snp ELucidation                                                              Subtype  Salmonella enterica  subsp  enterica serovar Heidelberg and Enteritidis genomes using  in silico  33 bp k mer SNP subtyping schemes developed by Genevieve Labbe et al  Subtype  Salmonella  genome assemblies  FASTA files  and or whole genome sequencing reads  FASTQ files     Usage       1  Enter your FASTA FASTQ file s  2  Select which scheme you would like to use  e g,bio_hansel,"fastqsanger, fastq, fasta,fastqsanger, fastq,fasta",Bio Hansel,tabular
149,with options and commands, Options Summary for HIV Trace    Sequence file    A FASTA file  with nucleotide sequences to be analyzed  Each sequence will be aligned to the chosen reference sequence prior to network inference  Sequence names may include munged attributes  e g,hivtrace,fasta,HIV-Trace,txt
150,reports information about capsular (K) loci found in genome assemblies.,         Documentation available    com katholt Kaptive blob master README md     Acknowledgments       Tool Wrapper Author  Philip Mabon      ,kaptive,"fasta,genbank",Kaptive,"tabular,txt,fasta"
151,Filtering reads or k-mer from fasta file,  readthedocs io en latest using html filtering tools       ,kat_@EXECUTABLE@,fasta,KAT @EXECUTABLE@,"fastqsanger,tabular"
152, Estimates the coverage of each sequence in a file using K-mers from another sequence file(s).,    readthedocs io en latest using html sect       ,kat_@EXECUTABLE@,fasta,KAT @EXECUTABLE@,"tabular,txt"
153,with options and commands,MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models  MrBayes uses Markov chain Monte Carlo  MCMC  methods to estimate the posterior distribution of model parameters ,mrbayes,nex,MrBayes,txt
154,Explores plasmid content in WGS data,Heatmap display of plasmid content in WGS data,plasmid_profiler,tabular,Plasmid Profiler,"png,html,csv"
155,genome assembler for plasmids,SPAdes   St  Petersburg genome assembler   is intended for both standard isolates and single cell MDA bacteria assemblies  See  spbau,plasmidspades,"fastq,fasta",plasmidspades,"fasta,tabular,txt"
156,Builds an aa census and returns its coverage,  Amino Acid Coverage                      Builds an amino acid census and returns its coverage     Output    A file with one entry per line with the AA position and the coverage at the position       ,aacoverage,"bam,fasta,bed",Amino Acid Coverage,csv
157,Identifies amino acid mutations,  Amino Acid Variants                      Identifies amino acid mutations       ,aavariants,"bam,fasta,vcf,bed,tsv",Amino Acid Variants,vcf
158,Identifies codon variants and non-synonymous/synonymous mutations,  Codon Variants                 Call codon variants for a given BAM  A report is generated that details nucleotide variants within a  codon and the resulting AA variants  The report indicates whether the nucleotide variants correspond to a synonymous or non synonymous mutation       ,callcodonvar,"bam,fasta,bed",Codon Variants,csv
159,Identifies nucleotide variants,          Nucleotide Variants                      Call nucleotide variants for a given BAM file and a supplied reference file       ,callntvar,"bam,fasta",Nucleotide Variants,vcf
160,Generate a consensus sequence from a BAM file,  Consensus            Generate a consensus sequence for a given BAM and reference file   Percentage info  When percentage is set to 100  the most frequent base will be incorporated  note  in the case of a tie the base will be chosen in reverse alphabetical order   Insertions that are at least a multiple of 3 will be incorporated  i e,consensus,"bam,fasta",Consensus Sequence,fasta
161,Calculate the dN/dS value for each region in a bed file,  dNdS Report                      Determines the dNdS ratio for each codon variant in a supplied csv file  codon variants        ,dnds,"csv,fasta",dNdS Report,csv
162,,  Drug Resistance Mutations                            Generates a report detailing the drug resistant mutations found  above the reporting threshold  default  1         ,drmutations,"bam,fasta,vcf,bed,tsv",Drug Resistance Mutations,csv
163,Identifies drug resistance within an NGS dataset,  HyDRA   HIV Drug Resistance Analyzer                                       The HyDRA pipeline provides a pipeline for identifying drug resistance within a Next Generation Sequencing dataset  The pipeline takes as input the raw reads produced by a Next Generation Sequencer and produces a report detailing found drug resistance per sample   Authors          The HyDRA pipeline was developed by Eric Enns and David Peddle   Stages         The HyDRA pipleine proceeds through the following stages   1,hydra,"fastq,tsv",Hydra pipeline,"bam,csv,fastq,vcf,txt"
164,Runs seqTK sample if raw coverage is above user defined threshold ,      Usage      ,seqtk_nml_sample,"fastqsanger,fasta",seqTK Sample NML,"fastqsanger,txt"
165,"
    Salmonella In Silico Typing Resource commandline tool for serovar prediction
  ",     Usage        usage  sistr cmd   h    i fasta path genome name    f OUTPUT FORMAT                         o OUTPUT PREDICTION    M    p CGMLST PROFILES                         n NOVEL ALLELES    a ALLELES OUTPUT    T TMP DIR    K                          use full cgmlst db     no cgmlst    m     qc    t THREADS                         v    V                        F  F            SISTR  Salmonella In Silico Typing Resource  Command line Tool                                                                        Serovar predictions from whole genome sequence assemblies by determination of antigen gene and cgMLST gene alleles using BLAST,sistr_cmd,fasta,sistr_cmd,"csv,json,tabular,fasta"
166,Map query reads (FASTA/FASTQ) format onto the reference sequences,SMALT is a pairwise sequence alignment program for the experimentingcient mapping of DNA sequencing reads onto genomic reference sequences  It uses a combination of short word hashing and dynamic programming  Most types of sequencing platforms are supported including paired end sequencing reads ,smalt,"fastq,fastq,fastqsanger,fastqillumina,fastqsolexa,fasta,sam",smalt,cigar
167,with options and commands,     Frequently Asked Questions        SpolPred only accepts one FASTQ file  what if I have got paired end reads       Forward and reverse read files can be merged into one by making use of the Perl script   shuffleSequences fastq pl provided in Velvet software suite  SpolPred run will therefore take longer   than using only forward or reverse reads  In our dataset  read Methods for more details   the forward file   had enough reads to find all present spacers and infer the octal code for 49 out of 51 samples,spolpred,fastqsanger,SpolPred,tabular
168,Short Read Sequence Typing for Bacterial Pathogens,Short Read Sequence Typing for Bacterial Pathogens,srst2,"fastqsanger,tabular,fasta",SRST2,"bam,tabular,fasta"
169,k-mer tool for multilocus sequence typing, Original manual for command line available at  biology gatech edu page software stringmlst stringMLST useageDocumentation,stringmlst,"fastqsanger,tabular,fasta",StringMLST,"tabular,txt,fastqsanger"


"Direction","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","Count","geneID","Ontology"
"1","GO:0044708","single-organism behavior","16/88","417/14042",5.61495288643537e-09,1.01293750071294e-05,8.49926552704638e-06,16,"Nr4a2/Adcyap1/Crhbp/Tac1/Lmx1a/C1ql1/Klhl1/Slitrk6/Foxa2/Kit/Lmx1b/Neurod2/Nrxn1/Foxb1/Bdnf/Chl1","BP"
"1","GO:0007409","axonogenesis","15/88","381/14042",1.26437269313312e-08,1.14046416920607e-05,9.56930490908116e-06,15,"Nr4a2/Myo5b/Ret/Lmx1a/Nrp2/Epha7/Slitrk6/Ntn1/Ntng1/Sema5a/Foxb1/Prdm8/Bdnf/Etv4/Chl1","BP"
"1","GO:0061564","axon development","15/88","408/14042",3.1453681139674e-08,1.8914146925324e-05,1.58703135013513e-05,15,"Nr4a2/Myo5b/Ret/Lmx1a/Nrp2/Epha7/Slitrk6/Ntn1/Ntng1/Sema5a/Foxb1/Prdm8/Bdnf/Etv4/Chl1","BP"
"1","GO:0001764","neuron migration","9/88","154/14042",4.95765282876273e-07,0.000223590142577199,0.000187608020204232,9,"Nr4a2/Pitx2/Nrp2/Ntn1/Erbb4/Lmx1b/Hsp90aa1/Barhl1/Chl1","BP"
"1","GO:0008137","NADH dehydrogenase (ubiquinone) activity","5/88","26/14003",5.18033754950961e-07,5.29215167156547e-05,4.59834805529325e-05,5,"ND2/ND1/ND5/ND4/ND6","MF"
"1","GO:0050136","NADH dehydrogenase (quinone) activity","5/88","26/14003",5.18033754950961e-07,5.29215167156547e-05,4.59834805529325e-05,5,"ND2/ND1/ND5/ND4/ND6","MF"
"1","GO:0003954","NADH dehydrogenase activity","5/88","27/14003",6.32632693073407e-07,5.29215167156547e-05,4.59834805529325e-05,5,"ND2/ND1/ND5/ND4/ND6","MF"
"1","GO:0070469","respiratory chain","7/90","79/14216",6.44362467245842e-07,6.65941156401621e-05,5.60792552759259e-05,7,"ND2/ND1/ND5/ND4/CYTB/ND6/COX1","CC"
"1","GO:0050769","positive regulation of neurogenesis","14/88","452/14042",7.6404123851785e-07,0.000247633443195799,0.000207782058183895,14,"Adcyap1/Foxa1/Myo5b/Ret/Lmx1a/Foxa2/Ntn1/Kit/Neurod2/Dmrta2/Tcf4/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0098793","presynapse","12/90","321/14216",8.10125786366342e-07,6.65941156401621e-05,5.60792552759259e-05,12,"Adcyap1/Slc17a6/Gabra2/Crhbp/C1ql1/Cdh8/Calb2/Unc13c/Tmem163/Grm2/Nrxn1/Bdnf","CC"
"1","GO:0042773","ATP synthesis coupled electron transport","6/88","52/14042",8.2361455608359e-07,0.000247633443195799,0.000207782058183895,6,"ND2/ND5/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0001077","transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding","10/88","212/14003",8.25802625672397e-07,5.29215167156547e-05,4.59834805529325e-05,10,"Nr4a2/Pitx2/Foxa1/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Tcf4/Barhl1","MF"
"1","GO:0030424","axon","14/90","459/14216",1.05148603642361e-06,6.65941156401621e-05,5.60792552759259e-05,14,"Adcyap1/Slc17a6/Gabra2/Crhbp/Ret/Tac1/C1ql1/Nrp2/Calb2/Unc13c/Grm2/Nrxn1/Bdnf/Ncam2","CC"
"1","GO:0000977","RNA polymerase II regulatory region sequence-specific DNA binding","14/88","464/14003",1.07823106119599e-06,5.29215167156547e-05,4.59834805529325e-05,14,"Nr4a2/Pitx2/Ebf1/Ebf2/Ebf3/Lmx1a/Neurod6/Foxa2/Lmx1b/Neurod2/Tcf4/Nhlh2/Barhl1/Etv4","MF"
"1","GO:0001012","RNA polymerase II regulatory region DNA binding","14/88","470/14003",1.25544772555275e-06,5.29215167156547e-05,4.59834805529325e-05,14,"Nr4a2/Pitx2/Ebf1/Ebf2/Ebf3/Lmx1a/Neurod6/Foxa2/Lmx1b/Neurod2/Tcf4/Nhlh2/Barhl1/Etv4","MF"
"1","GO:0071542","dopaminergic neuron differentiation","5/88","31/14042",1.28784962921877e-06,0.000331897247301522,0.00027848537846866,5,"Nr4a2/Lmx1a/Foxa2/Lmx1b/Dmrta2","BP"
"1","GO:0001228","transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding","11/88","283/14003",1.52414319807013e-06,5.29215167156547e-05,4.59834805529325e-05,11,"Nr4a2/Pitx2/Foxa1/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Neurod2/Tcf4/Barhl1","MF"
"1","GO:0016655","oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","5/88","32/14003",1.53953503172814e-06,5.29215167156547e-05,4.59834805529325e-05,5,"ND2/ND1/ND5/ND4/ND6","MF"
"1","GO:0045666","positive regulation of neuron differentiation","12/88","368/14042",3.00090666337554e-06,0.000616346274445853,0.000517158328073951,12,"Adcyap1/Foxa1/Myo5b/Ret/Lmx1a/Foxa2/Ntn1/Neurod2/Tcf4/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0007270","neuron-neuron synaptic transmission","8/88","143/14042",3.07489826497377e-06,0.000616346274445853,0.000517158328073951,8,"Adcyap1/Crhbp/Tac1/Erbb4/Cdh8/Grm2/Nrxn1/Bdnf","BP"
"1","GO:0050808","synapse organization","10/88","256/14042",4.40718977596831e-06,0.000694121077933916,0.000582416915666339,10,"Lmx1a/C1ql1/Epha7/Slitrk6/Erbb4/Lmx1b/Neurod2/Nrxn1/Bdnf/Cbln2","BP"
"1","GO:0050890","cognition","10/88","257/14042",4.56234316314345e-06,0.000694121077933916,0.000582416915666339,10,"Tac1/Lmx1a/C1ql1/Kit/Lmx1b/Neurod2/Nrxn1/Foxb1/Bdnf/Chl1","BP"
"1","GO:0022904","respiratory electron transport chain","6/88","70/14042",4.84717123206197e-06,0.000694121077933916,0.000582416915666339,6,"ND2/ND5/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0006119","oxidative phosphorylation","6/88","71/14042",5.26816858502786e-06,0.000694121077933916,0.000582416915666339,6,"ND2/ND5/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0030900","forebrain development","11/88","324/14042",5.47282241743306e-06,0.000694121077933916,0.000582416915666339,11,"Nr4a2/Pitx2/Lmx1a/Nrp2/Neurod6/Erbb4/Dmrta2/Sema5a/Foxb1/Prdm8/Uchl5","BP"
"1","GO:0030901","midbrain development","5/88","42/14042",6.10754901203542e-06,0.000694121077933916,0.000582416915666339,5,"Lmx1a/Lmx1b/Barhl1/Foxb1/Uchl5","BP"
"1","GO:0007411","axon guidance","8/88","157/14042",6.15628450495713e-06,0.000694121077933916,0.000582416915666339,8,"Lmx1a/Nrp2/Epha7/Ntn1/Sema5a/Bdnf/Etv4/Chl1","BP"
"1","GO:0097485","neuron projection guidance","8/88","159/14042",6.75920249104146e-06,0.000717270664343458,0.000601841063908212,8,"Lmx1a/Nrp2/Epha7/Ntn1/Sema5a/Bdnf/Etv4/Chl1","BP"
"1","GO:0022900","electron transport chain","6/88","75/14042",7.26001666422594e-06,0.000727615003459089,0.000610520699599819,6,"ND2/ND5/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0015980","energy derivation by oxidation of organic compounds","9/88","216/14042",8.14303332420724e-06,0.000773159585098414,0.000648735840454848,9,"ND2/ND1/ND5/ND4/CYTB/COX1/Hmgb1/Bdnf/Ppp1r3c","BP"
"1","GO:0042775","mitochondrial ATP synthesis coupled electron transport","5/88","48/14042",1.19360050080229e-05,0.00104722948993209,0.000878699968795864,5,"ND2/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0033555","multicellular organismal response to stress","6/88","82/14042",1.21905871887882e-05,0.00104722948993209,0.000878699968795864,6,"Nr4a2/Adcyap1/Ret/Tac1/Neurod2/Bdnf","BP"
"1","GO:0007611","learning or memory","9/88","232/14042",1.44498294074571e-05,0.00118488601141148,0.000994203573584846,9,"Tac1/Lmx1a/C1ql1/Kit/Lmx1b/Neurod2/Nrxn1/Foxb1/Bdnf","BP"
"1","GO:0004714","transmembrane receptor protein tyrosine kinase activity","5/88","53/14003",1.97779260090557e-05,0.000604325516943368,0.000525098152521127,5,"Ret/Nrp2/Epha7/Erbb4/Kit","MF"
"1","GO:0048863","stem cell differentiation","7/88","136/14042",2.26297515219811e-05,0.00177495964111539,0.00148931728551986,7,"Pitx2/Foxa1/Ret/Nrp2/Erbb4/Kit/Etv4","BP"
"1","GO:0006935","chemotaxis","11/88","381/14042",2.49884216851694e-05,0.00181939569211787,0.00152660229038715,11,"Scg2/Lmx1a/Nrp2/Epha7/Ntn1/Kit/Sema5a/Hmgb1/Bdnf/Etv4/Chl1","BP"
"1","GO:0045333","cellular respiration","7/88","139/14042",2.60573165539509e-05,0.00181939569211787,0.00152660229038715,7,"ND2/ND1/ND5/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0042330","taxis","11/88","383/14042",2.62218891325192e-05,0.00181939569211787,0.00152660229038715,11,"Scg2/Lmx1a/Nrp2/Epha7/Ntn1/Kit/Sema5a/Hmgb1/Bdnf/Etv4/Chl1","BP"
"1","GO:0000982","transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding","10/88","316/14003",2.82494602927358e-05,0.000776860158050233,0.000675013419626423,10,"Nr4a2/Pitx2/Foxa1/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Tcf4/Barhl1","MF"
"1","GO:0007612","learning","7/88","144/14042",3.27156386965366e-05,0.00218588934105748,0.00183411650860115,7,"Tac1/C1ql1/Kit/Neurod2/Nrxn1/Foxb1/Bdnf","BP"
"1","GO:0021536","diencephalon development","5/88","60/14042",3.58883986461863e-05,0.00231223825563286,0.00194013222756451,5,"Nr4a2/Pitx2/Nrp2/Sema5a/Foxb1","BP"
"-1","GO:0098793","presynapse","8/57","321/14216",3.90671708773673e-05,0.00397706136250391,0.0032922020476527,8,"Gad2/Gad1/Pdyn/Cckar/Slc32a1/Nrxn3/Cplx1/Cadps2","CC"
"1","GO:0030534","adult behavior","7/88","151/14042",4.43345841229507e-05,0.00272324207308771,0.00228499364050655,7,"Nr4a2/Crhbp/Klhl1/Slitrk6/Foxa2/Nrxn1/Chl1","BP"
"1","GO:0001755","neural crest cell migration","4/88","32/14042",4.52867307054497e-05,0.00272324207308771,0.00228499364050655,4,"Pitx2/Ret/Nrp2/Erbb4","BP"
"1","GO:0061180","mammary gland epithelium development","5/88","64/14042",4.91262688875434e-05,0.00285883190558478,0.0023987631463595,5,"Pthlh/Ntn1/Erbb4/Foxb1/Etv4","BP"
"1","GO:0008361","regulation of cell size","7/88","155/14042",5.23680500081781e-05,0.00295110215896639,0.00247618444660618,7,"Myo5b/Ret/Epha7/Ntn1/Hsp90aa1/Sema5a/Bdnf","BP"
"1","GO:0021537","telencephalon development","8/88","212/14042",5.39835760786534e-05,0.00295110215896639,0.00247618444660618,8,"Lmx1a/Nrp2/Neurod6/Erbb4/Dmrta2/Foxb1/Prdm8/Uchl5","BP"
"1","GO:0016651","oxidoreductase activity, acting on NAD(P)H","5/88","66/14003",5.77694316669951e-05,0.00144423579167488,0.00125489578836439,5,"ND2/ND1/ND5/ND4/ND6","MF"
"1","GO:0060560","developmental growth involved in morphogenesis","8/88","215/14042",5.96063947753586e-05,0.00316264518161021,0.00265368407699584,8,"Myo5b/Nrp2/Pthlh/Epha7/Ntn1/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0030879","mammary gland development","6/88","109/14042",6.15990408805305e-05,0.0031749905642422,0.00266404273041212,6,"Pthlh/Rxfp1/Ntn1/Erbb4/Foxb1/Etv4","BP"
"1","GO:0019199","transmembrane receptor protein kinase activity","5/88","68/14003",6.67221376308171e-05,0.00152904898737289,0.00132858993352592,5,"Ret/Nrp2/Epha7/Erbb4/Kit","MF"
"1","GO:0051961","negative regulation of nervous system development","9/88","284/14042",7.04784940358242e-05,0.00353175564557297,0.00296339398899167,9,"Adcyap1/Lmx1a/Epha7/Foxa2/Ntn1/Erbb4/Neurod2/Sema5a/Bdnf","BP"
"1","GO:0006091","generation of precursor metabolites and energy","9/88","286/14042",7.43805945595884e-05,0.0036265565563648,0.00304293869065969,9,"ND2/ND1/ND5/ND4/CYTB/COX1/Hmgb1/Bdnf/Ppp1r3c","BP"
"-1","GO:0060077","inhibitory synapse","3/57","21/14216",7.72244924758042e-05,0.00397706136250391,0.0032922020476527,3,"Gad2/Gad1/Slc32a1","CC"
"1","GO:0021953","central nervous system neuron differentiation","7/88","165/14042",7.77845602080547e-05,0.00369271964777186,0.00309845422657016,7,"Nr4a2/Lmx1a/Nrp2/Erbb4/Lmx1b/Nrxn1/Prdm8","BP"
"1","GO:0004713","protein tyrosine kinase activity","6/88","116/14003",8.8489660599793e-05,0.00187189666653408,0.00162649011790713,6,"Ret/Nrp2/Epha7/Erbb4/Kit/Hsp90aa1","MF"
"1","GO:0000978","RNA polymerase II core promoter proximal region sequence-specific DNA binding","9/88","295/14003",9.62693180210567e-05,0.0018910044611279,0.00164309287148721,9,"Nr4a2/Pitx2/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Tcf4/Etv4","MF"
"1","GO:0006120","mitochondrial electron transport, NADH to ubiquinone","3/88","15/14042",0.000102478105416551,0.00474026928644764,0.00397742282291498,3,"ND2/ND4/Bdnf","BP"
"1","GO:0000987","core promoter proximal region sequence-specific DNA binding","9/88","303/14003",0.000117970998313607,0.00213116271875409,0.00185176626663035,9,"Nr4a2/Pitx2/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Tcf4/Etv4","MF"
"1","GO:0060562","epithelial tube morphogenesis","9/88","305/14042",0.000121438665498884,0.00538741991682291,0.00452042819488351,9,"Pitx2/Foxa1/Ret/Pthlh/Epha7/Foxa2/Ntn1/Sema5a/Etv4","BP"
"1","GO:0001159","core promoter proximal region DNA binding","9/88","305/14003",0.00012399492181842,0.00213116271875409,0.00185176626663035,9,"Nr4a2/Pitx2/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Tcf4/Etv4","MF"
"1","GO:0021854","hypothalamus development","3/88","16/14042",0.000125555880277726,0.00538741991682291,0.00452042819488351,3,"Pitx2/Nrp2/Foxb1","BP"
"1","GO:0030324","lung development","7/88","179/14042",0.00012949658230163,0.00538741991682291,0.00452042819488351,7,"Pitx2/Foxa1/Adamts2/Pthlh/Rxfp1/Foxa2/Hmgb1","BP"
"1","GO:0050807","regulation of synapse organization","6/88","125/14042",0.000131729630475963,0.00538741991682291,0.00452042819488351,6,"Epha7/Slitrk6/Neurod2/Nrxn1/Bdnf/Cbln2","BP"
"1","GO:0050804","modulation of synaptic transmission","9/88","309/14042",0.000134005769397848,0.00538741991682291,0.00452042819488351,9,"Adcyap1/Tac1/Erbb4/Kit/Neurod2/Unc13c/Grm2/Nrxn1/Bdnf","BP"
"1","GO:0042551","neuron maturation","4/88","42/14042",0.0001343868604529,0.00538741991682291,0.00452042819488351,4,"Nr4a2/Ret/C1ql1/Nrxn1","BP"
"1","GO:0030323","respiratory tube development","7/88","182/14042",0.000143575571805707,0.00563065938124991,0.0047245233925997,7,"Pitx2/Foxa1/Adamts2/Pthlh/Rxfp1/Foxa2/Hmgb1","BP"
"1","GO:0050803","regulation of synapse structure or activity","6/88","130/14042",0.000163347754165201,0.00626977337263878,0.00526078545329359,6,"Epha7/Slitrk6/Neurod2/Nrxn1/Bdnf/Cbln2","BP"
"1","GO:0046034","ATP metabolic process","7/88","187/14042",0.000169785699066512,0.00627387435014013,0.00526422646487426,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0021761","limbic system development","5/88","83/14042",0.000170410112614671,0.00627387435014013,0.00526422646487426,5,"Pitx2/Lmx1a/Nrp2/Neurod6/Foxb1","BP"
"1","GO:0051963","regulation of synapse assembly","5/88","84/14042",0.000180308825371026,0.00650554241938663,0.00545861243965339,5,"Epha7/Slitrk6/Nrxn1/Bdnf/Cbln2","BP"
"1","GO:0030285","integral component of synaptic vesicle membrane","3/90","18/14216",0.000186914190753698,0.00887842406080066,0.00747656763014793,3,"Slc17a6/Gabra2/Tmem163","CC"
"1","GO:0030902","hindbrain development","6/88","135/14042",0.000200693595076128,0.00709904402975168,0.00595660247099015,6,"Lmx1a/Klhl1/Foxa2/Lmx1b/Neurod2/Nrxn1","BP"
"1","GO:0021549","cerebellum development","5/88","87/14042",0.000212654344846385,0.00724546633291441,0.00607946118959676,5,"Lmx1a/Klhl1/Lmx1b/Neurod2/Nrxn1","BP"
"1","GO:0048588","developmental cell growth","7/88","194/14042",0.000212865696033517,0.00724546633291441,0.00607946118959676,7,"Myo5b/Nrp2/Epha7/Ntn1/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0050768","negative regulation of neurogenesis","8/88","263/14042",0.000240034779035583,0.00801893965518874,0.00672846027783954,8,"Adcyap1/Lmx1a/Epha7/Foxa2/Ntn1/Erbb4/Sema5a/Bdnf","BP"
"1","GO:0035239","tube morphogenesis","9/88","336/14042",0.000250635294845906,0.00822083767094573,0.0068978670619792,9,"Pitx2/Foxa1/Ret/Pthlh/Epha7/Foxa2/Ntn1/Sema5a/Etv4","BP"
"1","GO:0060541","respiratory system development","7/88","202/14042",0.000272493545880709,0.00867429816277447,0.00727835264212259,7,"Pitx2/Foxa1/Adamts2/Pthlh/Rxfp1/Foxa2/Hmgb1","BP"
"1","GO:0008344","adult locomotory behavior","5/88","92/14042",0.000276170922575041,0.00867429816277447,0.00727835264212259,5,"Nr4a2/Klhl1/Slitrk6/Foxa2/Chl1","BP"
"1","GO:0022604","regulation of cell morphogenesis","10/88","418/14042",0.000278885417650177,0.00867429816277447,0.00727835264212259,10,"Myo5b/Ret/Epha7/Palmd/Ntn1/Kit/Strip2/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0048665","neuron fate specification","3/88","21/14042",0.000291510946259902,0.0088836127546169,0.007453982460695,3,"Foxa1/Foxa2/Dmrta2","BP"
"1","GO:1990138","neuron projection extension","6/88","145/14042",0.000295463838845351,0.0088836127546169,0.007453982460695,6,"Myo5b/Nrp2/Ntn1/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0009205","purine ribonucleoside triphosphate metabolic process","7/88","206/14042",0.000306983201931908,0.00901724884459729,0.00756611263772371,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0014032","neural crest cell development","4/88","52/14042",0.000309905448095916,0.00901724884459729,0.00756611263772371,4,"Pitx2/Ret/Nrp2/Erbb4","BP"
"1","GO:0030672","synaptic vesicle membrane","4/90","52/14216",0.000322425160164232,0.00924967217916016,0.00778919762455593,4,"Slc17a6/Gabra2/Unc13c/Tmem163","CC"
"1","GO:0099501","exocytic vesicle membrane","4/90","52/14216",0.000322425160164232,0.00924967217916016,0.00778919762455593,4,"Slc17a6/Gabra2/Unc13c/Tmem163","CC"
"1","GO:0060074","synapse maturation","3/88","22/14042",0.000336013163672555,0.00942727114311114,0.00791015048651758,3,"Erbb4/Neurod2/Nrxn1","BP"
"1","GO:0022037","metencephalon development","5/88","96/14042",0.000336599430795044,0.00942727114311114,0.00791015048651758,5,"Lmx1a/Klhl1/Lmx1b/Neurod2/Nrxn1","BP"
"1","GO:0009167","purine ribonucleoside monophosphate metabolic process","7/88","210/14042",0.000344900163772359,0.00942727114311114,0.00791015048651758,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0009199","ribonucleoside triphosphate metabolic process","7/88","210/14042",0.000344900163772359,0.00942727114311114,0.00791015048651758,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0098563","intrinsic component of synaptic vesicle membrane","3/90","22/14216",0.000346348207031003,0.00924967217916016,0.00778919762455593,3,"Slc17a6/Gabra2/Tmem163","CC"
"1","GO:0009126","purine nucleoside monophosphate metabolic process","7/88","211/14042",0.000354943431438492,0.0095569843330603,0.00801898907161904,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0009161","ribonucleoside monophosphate metabolic process","7/88","213/14042",0.000375734166274451,0.00996038937348701,0.00835747457058836,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0001667","ameboidal-type cell migration","8/88","282/14042",0.000383689418057072,0.00996038937348701,0.00835747457058836,8,"Pitx2/Ret/Tac1/Nrp2/Erbb4/Kit/Sema5a/Hmgb1","BP"
"1","GO:0009144","purine nucleoside triphosphate metabolic process","7/88","214/14042",0.000386489609835971,0.00996038937348701,0.00835747457058836,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0033267","axon part","7/90","212/14216",0.000389459881227796,0.00924967217916016,0.00778919762455593,7,"Adcyap1/Slc17a6/Crhbp/Calb2/Unc13c/Nrxn1/Bdnf","CC"


sample_name,protocol,organism,ip,data_source
atac-seq_PE,ATAC-seq,human,,microtest
atac-seq_SE,ATAC-seq,human,,microtest
chip-seq_PE,CHIP-seq,human,H3K27ac,microtest
chip-seq_SE,CHIP-seq,human,H3K27ac,microtest
chipmentation_PE,ChIPmentation,human,H3K27ac,microtest
chipmentation_SE,ChIPmentation,human,H3K27ac,microtest
cpgseq_example_data,CpG-seq,human,,microtest
quant-seq_SE,Quant-seq,human,,microtest
rrbs,RRBS,human,,microtest
rrbs_PE,RRBS,human,,microtest
wgbs,WGBS,human,,microtest
RNA_TRUseq_50SE,SMART,human,,microtest
RNA_SMART_50SE,SMART,human,,microtest
rrbs_PE_fq,RRBS,human,,microtest
rrbs_fq,RRBS,human,,microtest


doi,best_oa_evidence,best_oa_host,best_oa_license,best_oa_url,best_oa_url_is_pdf,best_oa_version,data_standard,doi_url,genre,is_oa,journal_is_oa,journal_issns,journal_name,published_date,publisher
10.1017/pab.2014.10,,,,,False,,2,https://doi.org/10.1017/pab.2014.10,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.11,,,,,False,,1,https://doi.org/10.1017/pab.2014.11,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.12,open (via free pdf),publisher,,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/92E949DFA04AF586E3F23F335CBF8EAF/S0094837314000128a.pdf/div-class-title-shell-ornamentation-as-a-likely-exaptation-evidence-from-predatory-drilling-on-cenozoic-bivalves-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2014.12,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.13,,,,,False,,2,https://doi.org/10.1017/pab.2014.13,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.14,,,,,False,,2,https://doi.org/10.1017/pab.2014.14,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-24,Cambridge University Press (CUP)
10.1017/pab.2014.15,oa repository (via OAI-PMH title and first author match),repository,,https://cloudfront.escholarship.org/dist/prd/content/qt3hj990hq/qt3hj990hq.pdf,True,submittedVersion,2,https://doi.org/10.1017/pab.2014.15,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-02-24,Cambridge University Press (CUP)
10.1017/pab.2014.16,,,,,False,,2,https://doi.org/10.1017/pab.2014.16,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-24,Cambridge University Press (CUP)
10.1017/pab.2014.17,,,,,False,,2,https://doi.org/10.1017/pab.2014.17,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-23,Cambridge University Press (CUP)
10.1017/pab.2014.18,,,,,False,,2,https://doi.org/10.1017/pab.2014.18,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-03-01,Cambridge University Press (CUP)
10.1017/pab.2014.19,open (via free pdf),publisher,,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/3B2D09B130A7D9930BD7C9DFCF4BBF43/S0094837314000190a.pdf/div-class-title-paleoenm-applying-ecological-niche-modeling-to-the-fossil-record-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2014.19,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-03-01,Cambridge University Press (CUP)
10.1017/pab.2014.2,open (via free pdf),publisher,,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/DA41C3B09D9352EEFECF22847797A312/S0094837314000025a.pdf/div-class-title-was-the-ediacaran-cambrian-radiation-a-unique-evolutionary-event-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2014.2,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.20,,,,,False,,2,https://doi.org/10.1017/pab.2014.20,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-03-01,Cambridge University Press (CUP)
10.1017/pab.2014.21,,,,,False,,2,https://doi.org/10.1017/pab.2014.21,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-24,Cambridge University Press (CUP)
10.1017/pab.2014.22,,,,,False,,2,https://doi.org/10.1017/pab.2014.22,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-23,Cambridge University Press (CUP)
10.1017/pab.2014.23,,,,,False,,2,https://doi.org/10.1017/pab.2014.23,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-24,Cambridge University Press (CUP)
10.1017/pab.2014.3,oa repository (via OAI-PMH title and first author match),repository,,https://cloudfront.escholarship.org/dist/prd/content/qt3pv0f1w0/qt3pv0f1w0.pdf,True,submittedVersion,2,https://doi.org/10.1017/pab.2014.3,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.4,oa repository (via OAI-PMH title and first author match),repository,,https://dash.harvard.edu/bitstream/handle/1/16953007/77126500.pdf?sequence=1,True,submittedVersion,2,https://doi.org/10.1017/pab.2014.4,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.5,oa repository (via OAI-PMH title and first author match),repository,,https://dash.harvard.edu/bitstream/handle/1/34308891/83711915.pdf?sequence=1,True,submittedVersion,2,https://doi.org/10.1017/pab.2014.5,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.6,,,,,False,,2,https://doi.org/10.1017/pab.2014.6,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.7,,,,,False,,2,https://doi.org/10.1017/pab.2014.7,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.8,,,,,False,,2,https://doi.org/10.1017/pab.2014.8,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.9,,,,,False,,2,https://doi.org/10.1017/pab.2014.9,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2015.10,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/874018CECB882EED1D9280C40E1AD3AD/S009483731500010Xa.pdf/div-class-title-phanerozoic-diversity-and-neutral-theory-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.10,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-03-23,Cambridge University Press (CUP)
10.1017/pab.2015.11,,,,,False,,2,https://doi.org/10.1017/pab.2015.11,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-06-01,Cambridge University Press (CUP)
10.1017/pab.2015.12,,,,,False,,2,https://doi.org/10.1017/pab.2015.12,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-06-01,Cambridge University Press (CUP)
10.1017/pab.2015.13,,,,,False,,2,https://doi.org/10.1017/pab.2015.13,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.16,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/03A62B39329A8595DD129EEC9BE8A065/S0094837315000160a.pdf/div-class-title-body-size-trends-of-the-extinct-giant-shark-span-class-italic-carcharocles-megalodon-span-a-deep-time-perspective-on-marine-apex-predators-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.16,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-06-01,Cambridge University Press (CUP)
10.1017/pab.2015.17,,,,,False,,2,https://doi.org/10.1017/pab.2015.17,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-11-06,Cambridge University Press (CUP)
10.1017/pab.2015.18,,,,,False,,2,https://doi.org/10.1017/pab.2015.18,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.19,open (via free pdf),publisher,,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/288407BA0A91914480A0531529F050EF/S0094837315000196a.pdf/div-class-title-span-class-italic-maiasaura-span-a-model-organism-for-extinct-vertebrate-population-biology-a-large-sample-statistical-assessment-of-growth-dynamics-and-survivorship-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.19,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.23,,,,,False,,2,https://doi.org/10.1017/pab.2015.23,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.24,,,,,False,,2,https://doi.org/10.1017/pab.2015.24,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-10-22,Cambridge University Press (CUP)
10.1017/pab.2015.25,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/07262A33436455F2CDC77BB46B596CB9/S0094837315000251a.pdf/div-class-title-the-proterozoic-record-of-eukaryotes-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.25,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.26,,,,,False,,2,https://doi.org/10.1017/pab.2015.26,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.27,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/75CE3A48554DEA5643FDFD64D269BD91/S0094837315000275a.pdf/div-class-title-a-quantitative-comparison-of-dispersed-spore-pollen-and-plant-megafossil-assemblages-from-a-middle-jurassic-plant-bed-from-yorkshire-uk-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.27,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.28,,,,,False,,2,https://doi.org/10.1017/pab.2015.28,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.29,,,,,False,,2,https://doi.org/10.1017/pab.2015.29,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.30,,,,,False,,2,https://doi.org/10.1017/pab.2015.30,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-10-30,Cambridge University Press (CUP)
10.1017/pab.2015.31,,,,,False,,2,https://doi.org/10.1017/pab.2015.31,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-10-26,Cambridge University Press (CUP)
10.1017/pab.2015.32,,,,,False,,2,https://doi.org/10.1017/pab.2015.32,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.33,,,,,False,,2,https://doi.org/10.1017/pab.2015.33,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-11-09,Cambridge University Press (CUP)
10.1017/pab.2015.34,,,,,False,,2,https://doi.org/10.1017/pab.2015.34,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-11-06,Cambridge University Press (CUP)
10.1017/pab.2015.35,,,,,False,,2,https://doi.org/10.1017/pab.2015.35,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-11-27,Cambridge University Press (CUP)
10.1017/pab.2015.36,,,,,False,,2,https://doi.org/10.1017/pab.2015.36,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-11-06,Cambridge University Press (CUP)
10.1017/pab.2015.37,,,,,False,,2,https://doi.org/10.1017/pab.2015.37,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-02-19,Cambridge University Press (CUP)
10.1017/pab.2015.38,,,,,False,,2,https://doi.org/10.1017/pab.2015.38,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-02-09,Cambridge University Press (CUP)
10.1017/pab.2015.39,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/4D20F5CAFA1B0AC7033975418668D82B/S0094837315000391a.pdf/div-class-title-the-paleobiology-database-application-programming-interface-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.39,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-12-23,Cambridge University Press (CUP)
10.1017/pab.2015.40,,,,,False,,2,https://doi.org/10.1017/pab.2015.40,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-09,Cambridge University Press (CUP)
10.1017/pab.2015.41,,,,,False,,2,https://doi.org/10.1017/pab.2015.41,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-02-11,Cambridge University Press (CUP)
10.1017/pab.2015.42,,,,,False,,2,https://doi.org/10.1017/pab.2015.42,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-12-23,Cambridge University Press (CUP)
10.1017/pab.2015.47,,,,,False,,2,https://doi.org/10.1017/pab.2015.47,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-28,Cambridge University Press (CUP)
10.1017/pab.2015.48,,,,,False,,2,https://doi.org/10.1017/pab.2015.48,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-05,Cambridge University Press (CUP)
10.1017/pab.2015.49,,,,,False,,2,https://doi.org/10.1017/pab.2015.49,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-13,Cambridge University Press (CUP)
10.1017/pab.2015.50,,,,,False,,2,https://doi.org/10.1017/pab.2015.50,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-28,Cambridge University Press (CUP)
10.1017/pab.2015.51,,,,,False,,2,https://doi.org/10.1017/pab.2015.51,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-28,Cambridge University Press (CUP)
10.1017/pab.2015.52,,,,,False,,2,https://doi.org/10.1017/pab.2015.52,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-16,Cambridge University Press (CUP)
10.1017/pab.2015.53,,,,,False,,2,https://doi.org/10.1017/pab.2015.53,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-18,Cambridge University Press (CUP)
10.1017/pab.2015.54,,,,,False,,2,https://doi.org/10.1017/pab.2015.54,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-02-01,Cambridge University Press (CUP)
10.1017/pab.2015.55,oa repository (via OAI-PMH doi match),repository,,https://research-information.bristol.ac.uk/files/57326592/Figueirido_Martin_Serra_Janis.pdf,True,submittedVersion,2,https://doi.org/10.1017/pab.2015.55,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2016-05-06,Cambridge University Press (CUP)
10.1017/pab.2015.56,,,,,False,,2,https://doi.org/10.1017/pab.2015.56,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-06,Cambridge University Press (CUP)
10.1017/pab.2015.6,,,,,False,,2,https://doi.org/10.1017/pab.2015.6,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-04-22,Cambridge University Press (CUP)
10.1017/pab.2015.7,,,,,False,,2,https://doi.org/10.1017/pab.2015.7,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-05-04,Cambridge University Press (CUP)
10.1017/pab.2015.8,,,,,False,,2,https://doi.org/10.1017/pab.2015.8,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-04-24,Cambridge University Press (CUP)
10.1017/pab.2015.9,,,,,False,,2,https://doi.org/10.1017/pab.2015.9,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-04-27,Cambridge University Press (CUP)
10.1017/pab.2016.1,,,,,False,,2,https://doi.org/10.1017/pab.2016.1,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-28,Cambridge University Press (CUP)
10.1017/pab.2016.11,,,,,False,,2,https://doi.org/10.1017/pab.2016.11,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-21,Cambridge University Press (CUP)
10.1017/pab.2016.12,,,,,False,,2,https://doi.org/10.1017/pab.2016.12,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-05,Cambridge University Press (CUP)
10.1017/pab.2016.13,,,,,False,,2,https://doi.org/10.1017/pab.2016.13,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-03,Cambridge University Press (CUP)
10.1017/pab.2016.14,,,,,False,,2,https://doi.org/10.1017/pab.2016.14,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-10,Cambridge University Press (CUP)
10.1017/pab.2016.15,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/A782669273739AFF911B2C87E8A7A262/S0094837316000154a.pdf/div-class-title-ecomorphological-diversifications-of-mesozoic-marine-reptiles-the-roles-of-ecological-opportunity-and-extinction-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2016.15,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2016-05-17,Cambridge University Press (CUP)
10.1017/pab.2016.16,,,,,False,,2,https://doi.org/10.1017/pab.2016.16,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-06-27,Cambridge University Press (CUP)
10.1017/pab.2016.19,,,,,False,,2,https://doi.org/10.1017/pab.2016.19,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-18,Cambridge University Press (CUP)
10.1017/pab.2016.2,,,,,False,,2,https://doi.org/10.1017/pab.2016.2,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-03,Cambridge University Press (CUP)
10.1017/pab.2016.20,,,,,False,,2,https://doi.org/10.1017/pab.2016.20,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-25,Cambridge University Press (CUP)
10.1017/pab.2016.24,,,,,False,,2,https://doi.org/10.1017/pab.2016.24,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-08-13,Cambridge University Press (CUP)
10.1017/pab.2016.26,,,,,False,,2,https://doi.org/10.1017/pab.2016.26,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-08-12,Cambridge University Press (CUP)
10.1017/pab.2016.3,,,,,False,,2,https://doi.org/10.1017/pab.2016.3,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-05,Cambridge University Press (CUP)
10.1017/pab.2016.4,,,,,False,,2,https://doi.org/10.1017/pab.2016.4,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-28,Cambridge University Press (CUP)
10.1017/pab.2016.5,,,,,False,,2,https://doi.org/10.1017/pab.2016.5,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-06,Cambridge University Press (CUP)
10.1017/pab.2016.6,,,,,False,,2,https://doi.org/10.1017/pab.2016.6,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-18,Cambridge University Press (CUP)
10.1017/pab.2016.7,,,,,False,,2,https://doi.org/10.1017/pab.2016.7,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-28,Cambridge University Press (CUP)


organism,UniGene,GenBank,symbol,ensembl,entrez
human,Hs.520640,NM_001101,ACTB,ENSG00000075624,60
human,Hs.534255,NM_004048,B2M,ENSG00000166710,567
human,Hs.592355,NM_002046,GAPDH,ENSG00000111640,2597
human,Hs.255230,NM_000181,GUSB,ENSG00000169919,2990
human,Hs.412707,NM_000194,HPRT1,ENSG00000165704,3251
human,Hs.509736,NM_007355,HSP90AB1,ENSG00000096384,3326
human,Hs.2795,NM_005566,LDHA,ENSG00000134333,3939
human,Hs.533282,NM_007363,NONO,ENSG00000147140,4841
human,Hs.78771,NM_000291,PGK1,ENSG00000102144,5230
human,Hs.256639,NM_006347,PPIH,ENSG00000171960,10465
human,Hs.546285,NM_001002,RPLP0,ENSG00000089157,6175
human,Hs.529618,NM_003234,TFRC,ENSG00000072274,7037
mouse,Mm.328431,NM_007393,Actb,ENSMUSG00000029580,11461
mouse,Mm.163,NM_009735,B2m,ENSMUSG00000060802,12010
mouse,Mm.343110,NM_008084,Gapdh,ENSMUSG00000057666,14433
mouse,Mm.3317,NM_010368,Gusb,ENSMUSG00000025534,110006
mouse,Mm.2180,NM_008302,Hsp90ab1,ENSMUSG00000023944,15516
mouse,Mm.29324,NM_010699,Ldha,ENSMUSG00000063229,16828
mouse,Mm.336205,NM_008828,Pgk1,ENSMUSG00000062070,18655
mouse,Mm.371613,NM_028677,Ppih,ENSMUSG00000060288,66101
mouse,Mm.158231,NM_023281,Sdha,ENSMUSG00000021577,66945
mouse,Mm.244820,NM_013684,Tbp,ENSMUSG00000014767,21374
mouse,Mm.28683,NM_011638,Tfrc,ENSMUSG00000022797,22042
mouse,Mm.331,NM_019639,Ubc,ENSMUSG00000008348,22190

OrganismCode,Active,CommonName,Phylum,Class,Order,Family,Genus,Species,Comments,NormalizedCode
1,1,"Chinook Salmon","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Oncorhynchus","tshawytscha",,136
2,1,"Rainbow / Steelhead Trout","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Oncorhynchus","mykiss",,161
3,1,"Striped Bass","Chordata","Osteichthyes","Perciformes","Percichthyidae","Morone","saxatilis",,172
4,1,"White Catfish","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ameiurus","catus",,179
5,1,"Brown Bullhead","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ameiurus","nebulosus",,132
6,1,"Channel Catfish","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ictalurus","punctatus",,135
7,1,"American Shad","Chordata","Osteichthyes","Clupeiformes","Clupeidae","Alosa","sapidissima",,126
8,1,"Threadfin Shad","Chordata","Osteichthyes","Clupeiformes","Clupeidae","Dorosoma","petenense",,175
9,1,"Splittail","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Pogonichthys","macrolepidotus",,169
10,1,"Sacramento Pikeminnow","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Ptychocheilus","grandis",,164
11,1,"Threespine Stickleback","Chordata","Osteichthyes","Gasterosteiformes","Gasterosteidae","Gasterosteus","aculeatus",,171
12,1,"Hardhead","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Mylopharodon","conocephalus",,186
13,1,"Golden Shiner","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Notemigonus","crysoleucas",,141
14,1,"Common Carp","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Cyprinus","carpio",,134
15,1,"Goldfish","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Carassius","auratus",,142
16,1,"Hitch","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Lavinia","exilicauda",,145
17,1,"Sacramento Blackfish","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Orthodon","microlepidotus",,163
18,1,"Black Crappie","Chordata","Osteichthyes","Perciformes","Centrarchidae","Pomoxis","nigromaculatus",,130
19,1,"Green Sunfish","Chordata","Osteichthyes","Perciformes","Centrarchidae","Lepomis","cyanellus",,143
20,1,"Warmouth","Chordata","Osteichthyes","Perciformes","Centrarchidae","Lepomis","gulosus",,183
21,1,"Bluegill","Chordata","Osteichthyes","Perciformes","Centrarchidae","Lepomis","macrochirus",,131
22,1,"Largemouth Bass","Chordata","Osteichthyes","Perciformes","Centrarchidae","Micropterus","salmoides",,148
23,1,"Bigscale Logperch","Chordata","Osteichthyes","Perciformes","Percidae","Percina","macrolepida",,128
24,1,"Tule Perch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Hysterocarpus","traski",,177
25,1,"Longfin Smelt","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Spirinchus","thaleichthys",,149
26,1,"Delta Smelt","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Hypomesus","transpacificus",,138
27,1,"White Sturgeon","Chordata","Osteichthyes","Acipenseriformes","Acipenseridae","Acipenser","transmontanus",,182
28,1,"Green Sturgeon","Chordata","Osteichthyes","Acipenseriformes","Acipenseridae","Acipenser","medirostris",,144
29,1,"Prickly Sculpin","Chordata","Osteichthyes","Scorpaeniformes","Cottidae","Cottus","asper",,159
30,1,"Yellowfin Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Acanthogobius","flavimanus",,184
31,1,"Inland Silverside","Chordata","Osteichthyes","Atheriniformes","Atherinidae","Menidia","beryllina",,146
32,1,"Starry Flounder","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Platichthys","stellatus",,173
33,1,"Lamprey Unknown","Chordata","Cephalaspidomorphi","Petromyzontiformes","Petromyzontidae","Lampetra","NA",,202
34,1,"Western Mosquitofish","Chordata","Osteichthyes","Cyprinodontiformes","Poeciliidae","Gambusia","affinis",,153
35,1,"Yellow Bullhead","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ictalurus","natalis",,191
36,1,"Smallmouth Bass","Chordata","Osteichthyes","Perciformes","Centrarchidae","Micropterus","dolomieu",,188
37,1,"Surf Smelt","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Hypomesus","pretiosus",,174
39,1,"Pacific Staghorn Sculpin","Chordata","Osteichthyes","Scorpaeniformes","Cottidae","Leptocottus","armatus",,170
40,1,"Riffle Sculpin","Chordata","Osteichthyes","Scorpaeniformes","Cottidae","Cottus","gulosus",,222
41,1,"White Crappie","Chordata","Osteichthyes","Perciformes","Centrarchidae","Pomoxis","annularis",,180
42,1,"Pacific Herring","Chordata","Osteichthyes","Clupeiformes","Clupeidae","Clupea","pallasi",,157
43,1,"Yellow Perch","Chordata","Osteichthyes","Perciformes","Percidae","Perca","flavescens",,
44,1,"Black Bullhead","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ameiurus","melas",,129
45,1,"Sacramento Perch","Chordata","Osteichthyes","Perciformes","Centrarchidae","Archoplites","interruptus",,214
46,1,"Tui Chub","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Gila","bicolor",,219
47,1,"Coho Salmon","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Oncorhynchus","kisutch",,
48,1,"Pacific Brook Lamprey","Chordata","Cephalaspidomorphi","Petromyzontiformes","Petromyzontidae","Lampetra","pacifica",,
49,1,"Redear Sunfish","Chordata","Osteichthyes","Perciformes","Centrarchidae","Lepomis","microlophus",,162
50,1,"Sacramento Sucker","Chordata","Osteichthyes","Cypriniformes","Catostomidae","Catostomus","occidentalis",,165
51,1,"Fathead Minnow","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Pimephales","promelas",,140
52,1,"California Roach","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Hesperoleucus","symmetricus",,185
53,1,"Speckled Dace","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Rhinichthys","osculus",,221
54,1,"Pumpkinseed","Chordata","Osteichthyes","Perciformes","Centrarchidae","Lepomis","gibbosus",,210
55,1,"Blue Catfish","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ictalurus","furcatus",,
60,1,"White Bass","Chordata","Osteichthyes","Perciformes","Percichthyidae","Morone","Chrysops",,
61,1,"Chameleon Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Tridentiger","trigonocephalus",,197
62,1,"Pink Salmon","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Oncorhynchus","gorbuscha",,
63,1,"Freshwater Eel","Chordata","Osteichthyes","Anguilliformes","Anguillidae","Anguilla","rostrata",,
64,1,"Red Shiner","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Cyprinella","lutrensis",,187
65,1,"Wakasagi","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Hypomesus","nipponensis",,178
66,1,"Shimofuri Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Tridentiger","bifasciatus",,167
67,1,"Rainwater Killifish","Chordata","Osteichthyes","Cyprinodontiformes","Cyprinodontidae","Lucania","parva",,147
68,1,"Northern Pike","Chordata","Osteichthyes","Esociformes","Esocidae","Esox","lucius",,
69,1,"Shokihaze Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Tridentiger","barbatus",,
70,1,"Spotted Bass","Chordata","Osteichthyes","Perciformes","Centrarchidae","Micropterus","punctulatus",,213
71,1,"Large-Scale Loach","Chordata","Osteichthyes","dabryanus","cobitidae","Paramisgurnus","dabryanus","Added on February 21, 2017",263
80,1,"Chinese Mitten Crab","Arthropoda","Crustacea","Decapoda","Grapsidae","Eriocheir","sinensis",,139
81,1,"Chinese Mitten Crab Temp.","NA","NA","NA","NA","NA","NA",,139
90,1,"Unknown","NA","NA","NA","NA","NA","unknown",,190
98,1,"Total Fish Count","NA","NA","NA","NA","NA","Total",,
99,1,"Total Fish Estimate","NA","NA","NA","NA","NA","Estimate",,
117,1,"Striped Mullet","Chordata","Osteichthyes","Perciformes","Mugilidae","Mugil","cephalus",,212
127,0,"Bay Pipefish","Chordata","Osteichthyes","Gasterosteiformes","Syngnathidae","Syngnathus","leptorhynchus",,127
133,0,"California Halibut","Chordata","Osteichthyes","Pleuronectiformes","Bothidae","Paralichthys","californicus",,133
137,0,"California Bay Shrimp","Arthropoda","Crustacea","Decapoda","Crangonidae","Crangon","franciscorum",,137
150,0,"Longjaw Mudsucker","Chordata","Osteichthyes","Percifomes","Gobiidae","Gillichthys","mirabilis",,150
151,0,"Black Sea Jellyfish","Cnidaria","Hydrozoa","Limnomedusae","Olindiadidae","Maeotias","inexpectata",,151
152,0,"Plainfin Midshipman","Chordata","Osteichthyes","Batrachoidiformes","Batrachoididae","Porichthys","notatus",,152
154,0,"Opossum Shrimp","Arthropoda","Crustacea","Malacostraca","Mysidae","neomysis","NA",,154
155,0,"Northern Anchovy","Chordata","Osteichthyes","Clupeiformes","Engraulidae","Engraulis","mordax",,155
156,0,"Bay Shrimp","Arthropoda","Crustacea","Euphausiacea","Palaemonidae","Palaemon","macrodactylum",,156
158,1,"Pacific Lamprey","Chordata","Cephalaspidomorphi","Petromyzontiformes","Petromyzontidae","Lampetra","tridentata",,158
160,0,"Asian Clam","Mollusca","Bivalvia","Myodia","Sphaeriidae","Potamocorbula","amurenis",,160
166,0,"Speckled Sanddab","Chordata","Osteichthyes","Pleuronectiformes","Bothidae","Citharichthys","stigmaeus",,166
168,0,"Shiner perch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Cymatogaster","aggregata",,168
176,0,"Topsmelt","Chordata","Osteichthyes","Atheriniformes","Atherinidae","Atherinops","affinis",,176
181,0,"White Croaker","Chordata","Osteichthyes","Perciformes","Sciaenidae","Genyonemus","lineatus",,181
192,0,"Bass Unknown","Chordata","Osteichthyes","Perciformes","Centrarchidae","Micropterus","NA",,192
193,0,"Sculpin Unknown","Chordata","Osteichthyes","Scorpaeniformes","Cottidae","NA","NA",,193
194,0,"Bay Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Lepidogobius","lepidus",,194
195,0,"Barred Surfperch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Amphistichus","argenteus",,195
196,0,"Brown Trout","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Salmo","trutta",,196
198,0,"Diamond Turbot","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Hypsopsetta","guttulata",,198
199,0,"English Sole","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Pleuronectes","vetulus",,199
200,0,"Goby Unknown","Chordata","Osteichthyes","Perciformes","Gobiidae","NA","NA",,200
201,0,"Jacksmelt","Chordata","Osteichthyes","Atheriniformes","Atherinidae","Atherinopsis","californiensis",,201
202,0,"Kern Brook Lamprey","Chordata","Cephalaspidomorphi","Petromyzontiformes","Petromyzontidae","Lampetra","hubbsi",,
203,0,"Minnow Unknown","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","NA","NA",,203
204,0,"Perch Unknown","Chordata","Osteichthyes","Perciformes","Percidae","NA","NA",,204
205,0,"Righteye Flounder Unknown","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","NA","NA",,205
206,0,"Rosyface Shinner","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Notropis","rubellus",,206
207,0,"Rockfish Unknown","Chordata","Osteichthyes","Scorpaeniformes","Scorpaenidae","NA","NA",,207
208,0,"River Lamprey","Chordata","Cephalaspidomorphi","Petromyzontiformes","Petromyzontidae","Lampetra","ayresi",,208
211,0,"Smelt Unknown","Chordata","Osteichthyes","Salmoniformes","Osmeridae","NA","NA",,211
215,0,"Sturgeon Unknown","Chordata","Osteichthyes","Acipenseriformes","Acipenseridae","Acipenser","NA",,215
216,0,"Sunfish Unknown","Chordata","Osteichthyes","Perciformes","Centrarchidae","NA","NA",,216
217,0,"Sucker Unknown","Chordata","Osteichthyes","Cypriniformes","Catostomidae","NA","NA",,217
218,0,"Silver Perch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Hyperprosopon","ellipticum",,218
220,0,"NoCatch","NA","NA","NA","NA","NA","nocatch",,220
223,0,"Walleye Surfperch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Hyperprosopon","Argenteum",,223
224,0,"Callico Serf Perch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Amphistichus","koelzi",,224
225,0,"Brown Smoothhound","Chordata","Elasmobranchiomorphi","Lamniformes","Carcharhinidae","Mustelus","henlei",,225
226,0,"Leopard Shark","Chordata","Elasmobranchiomorphi","Lamniformes","Carcharhinidae","Triakis","semifasciata",,226
227,0,"Arrow Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Clevelandia","ios",,227
228,0,"Pacific Sanddab","Chordata","Osteichthyes","Pleuronectiformes","Bothidae","Citharichthys","sordidus",,228
230,0,"Bat Ray","Chordata","Elasmobranchiomorphi","Rajiformes","Mobulidae","Myliobatis","californica",,230
231,0,"Big Skate","Chordata","Elasmobranchiomorphi","Rajiformes","Rajidae","Raja","binoculata",,231
232,0,"Pacific Butterfish","Chordata","Osteichthyes","Perciformes","Stromateidae","Peprilus","simillimus",,232
233,0,"Pacific Tomcod","Chordata","Osteichthyes","Gadiformes","Gadidae","Microgadus","proximus",,233
235,0,"Night Smelt","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Spirinchus","starski",,235
236,0,"Whitebait Smelt","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Allosmerus","elongatus",,236
237,0,"Pile Perch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Rhacochilus","vacca",,237
238,0,"Black Perch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Embiotoca","jacksoni",,238
240,0,"Sevengill Shark","Chordata","Elasmobranchiomorphi","Hexanchiformes","Hexanchidae","Notorynchus","maculatus",,240
241,0,"Spiny Dogfish","Chordata","Elasmobranchiomorphi","Squaliformes","Squalidae","Squalus","acanthias",,241
242,0,"Grey Smoothhound","Chordata","Elasmobranchiomorphi","Lamniformes","Carcharhinidae","Mustelus","californica",,242
243,0,"Rubberlip Surfperch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Rhacochilus","toxotes",,243
244,0,"Pacific Halibut","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Hippoglossus","stenolepis",,244
245,0,"Sand Sole","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Psettichthys","melanostictus",,245
246,0,"Flatfish","Chordata","Osteichthyes","Pleuronectiformes","NA","NA","NA",,246
247,0,"Rock Sole","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Lepidopsetta","bilineatta",,247
248,0,"Lingcod","Chordata","Osteichthyes","Scorpaeniformes","Hexagrammidae","Ophiodon","elongatus",,248
249,0,"Wolf-eel","Chordata","Osteichthyes","Percifomes","Anarhichadidae","Anarrhichthys","ocellantus",,249
250,0,"Spotfin Surfperch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Hyperprosopon","anale",,250
251,0,"White Perch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Phanerodon","furactus",,251
252,0,"Pacific Electric Ray","Chordata","Elasmobranchiomorphi","Rajiformes","Torpedinidae","Torpedo","californica",,252
253,0,"Pacific sardine","Chordata","Osteichthyes","Clupeiformes","Clupeidae","Sardinops","sagax",,253
254,0,"Dwarf Surfperch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Micrometrus","minimus",,254
255,0,"Butter Sole","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Isopsetta","NA",,255
256,0,"Redeye Bass","Chordata","Osteichthyes","Perciformes","Centrarchidae","Micropterus","coosae",,256
257,0,"Cheekspot Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Llypnus","gilberti",,257
258,0,"Kokanee Salmon","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Oncorhynchus","nerka",,258
259,0,"Herring Unknown","Chordata","Osteichthyes","Clupeiformes","Clupeidae","NA","NA",,259
260,0,"Catfish Unknown","Chordata","Osteichthyes","Siluriformes","Ictaluridae","NA","NA",,260
261,0,"Tidewater Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Eucyclogobius","newberryi",,261
262,0,"Silversides Unknown","Chordata","Osteichthyes","Atheriniformes","Atherinidae","NA","NA",,262


term_ID,description,frequency,plot_X,plot_Y,plot_size,uniqueness,dispensability,representative,eliminated
GO:0002252,immune_effector_process,0.185%,0.751,-0.132,4.375,0.984,0.0,2252,0
GO:0002376,immune_system_process,0.600%,0.871,0.182,4.886,0.991,0.0,2376,0
GO:0007155,cell_adhesion,0.544%,0.735,0.058,4.844,0.991,0.0,7155,0
GO:0009605,response_to_external_stimulus,1.370%,2.348,-2.016,5.245,0.954,0.0,9605,0
GO:0009987,cellular_process,63.780%,0.925,-0.032,6.913,0.997,0.0,9987,0
GO:0032259,methylation,3.103%,1.832,0.186,5.6,0.971,0.0,32259,0
GO:0043953,protein_transport_by_the_Tat_complex,0.073%,4.414,3.816,3.974,0.898,0.0,43953,0
GO:0048511,rhythmic_process,0.077%,1.784,0.156,3.994,0.991,0.0,48511,0
GO:0055062,phosphate_ion_homeostasis,0.035%,3.994,-1.417,3.653,0.908,0.0,55062,0
GO:0030320,cellular_monovalent_inorganic_anion_homeostasis,0.036%,,,3.668,0.78,0.991,55062,1
GO:0030002,cellular_anion_homeostasis,0.036%,,,3.668,0.78,0.971,55062,1
GO:0030643,cellular_phosphate_ion_homeostasis,0.033%,,,3.632,0.781,0.997,55062,1
GO:0017144,drug_metabolic_process,0.058%,0.998,0.261,3.868,0.929,0.013,17144,0
GO:0042157,lipoprotein_metabolic_process,0.210%,0.805,-1.236,4.431,0.931,0.014,42157,0
GO:0071555,cell_wall_organization,0.709%,1.075,-3.083,4.959,0.888,0.026,71555,0
GO:0009252,peptidoglycan_biosynthetic_process,0.533%,,,4.835,0.659,0.906,71555,1
GO:0009058,biosynthetic_process,31.611%,1.629,0.332,6.608,0.965,0.03,9058,0
GO:0015977,carbon_fixation,0.036%,-0.853,2.015,3.664,0.866,0.032,15977,0
GO:0017000,antibiotic_biosynthetic_process,0.028%,-1.238,-1.301,3.56,0.876,0.038,17000,0
GO:0007154,cell_communication,7.219%,0.686,0.105,5.967,0.935,0.043,7154,0
GO:0015979,photosynthesis,0.183%,0.817,0.178,4.37,0.923,0.043,15979,0
GO:0043158,heterocyst_differentiation,0.002%,-0.158,1.923,2.386,0.864,0.043,43158,0
GO:0019684,"photosynthesis,_light_reaction",0.069%,0.647,-0.204,3.947,0.905,0.044,19684,0
GO:0000103,sulfate_assimilation,0.084%,-0.072,0.305,4.033,0.903,0.044,103,0
GO:0052803,imidazole-containing_compound_metabolic_process,0.420%,-4.698,-4.354,4.732,0.794,0.051,52803,0
GO:0010304,PSII_associated_light-harvesting_complex_II_catabolic_process,0.001%,-0.184,-1.994,1.991,0.912,0.063,10304,0
GO:0052889,"9,9'-di-cis-zeta-carotene_desaturation_to_7,9,7',9'-tetra-cis-lycopene",0.003%,-1.443,3.633,2.566,0.815,0.088,52889,0
GO:0046148,pigment_biosynthetic_process,0.448%,-2.822,3.396,4.76,0.822,0.118,46148,0
GO:0051301,cell_division,1.230%,-3.732,4.71,5.198,0.793,0.126,51301,0
GO:0006662,glycerol_ether_metabolic_process,0.122%,-5.574,4.731,4.193,0.766,0.13,6662,0
GO:0051188,cofactor_biosynthetic_process,2.763%,-3.846,-1.595,5.55,0.772,0.143,51188,0
GO:0032465,regulation_of_cytokinesis,0.064%,-0.703,2.718,3.917,0.777,0.165,32465,0
GO:0032955,regulation_of_barrier_septum_assembly,0.025%,,,3.507,0.746,0.907,32465,1
GO:0032954,regulation_of_cytokinetic_process,0.043%,,,3.739,0.783,0.939,32465,1
GO:0006474,N-terminal_protein_amino_acid_acetylation,0.035%,0.006,-4.396,3.651,0.893,0.169,6474,0
GO:0019632,shikimate_metabolic_process,0.023%,-5.315,4.667,3.476,0.737,0.213,19632,0
GO:0055114,oxidation-reduction_process,15.060%,-4.53,5.502,6.286,0.784,0.215,55114,0
GO:0051174,regulation_of_phosphorus_metabolic_process,0.580%,0.531,-0.933,4.872,0.773,0.217,51174,0
GO:0006814,sodium_ion_transport,0.305%,5.155,4.058,4.592,0.875,0.22,6814,0
GO:0007049,cell_cycle,1.885%,-3.825,4.364,5.384,0.785,0.223,7049,0
GO:1901137,carbohydrate_derivative_biosynthetic_process,3.651%,-4.246,-1.981,5.671,0.763,0.228,1901137,0
GO:0018904,ether_metabolic_process,0.124%,-5.478,4.562,4.201,0.766,0.239,18904,0
GO:0070681,glutaminyl-tRNAGln_biosynthesis_via_transamidation,0.011%,-6.465,0.161,3.154,0.704,0.253,70681,0
GO:0006106,fumarate_metabolic_process,0.049%,-5.47,4.856,3.801,0.722,0.277,6106,0
GO:0072527,pyrimidine-containing_compound_metabolic_process,1.037%,-4.453,-3.775,5.124,0.778,0.282,72527,0
GO:0006767,water-soluble_vitamin_metabolic_process,1.215%,-5.912,4.693,5.193,0.711,0.289,6767,0
GO:0042364,water-soluble_vitamin_biosynthetic_process,1.160%,,,5.173,0.608,0.98,6767,1
GO:0072528,pyrimidine-containing_compound_biosynthetic_process,0.902%,-5.462,-3.245,5.063,0.696,0.305,72528,0
GO:0018298,protein-chromophore_linkage,0.095%,0.31,-5.184,4.084,0.885,0.317,18298,0
GO:0032784,"regulation_of_DNA-templated_transcription,_elongation",0.150%,-2.18,-5.083,4.284,0.731,0.326,32784,0
GO:0010966,regulation_of_phosphate_transport,0.002%,4.887,2.474,2.32,0.858,0.33,10966,0
GO:0045936,negative_regulation_of_phosphate_metabolic_process,0.182%,1.955,-0.891,4.368,0.77,0.331,45936,0
GO:0006304,DNA_modification,0.339%,-2.121,-6.477,4.639,0.808,0.332,6304,0
GO:0071214,cellular_response_to_abiotic_stimulus,0.113%,2.586,-2.069,4.162,0.92,0.333,71214,0
GO:0006527,arginine_catabolic_process,0.051%,-6.001,3.202,3.817,0.685,0.342,6527,0
GO:0072350,tricarboxylic_acid_metabolic_process,0.497%,-5.846,5.332,4.805,0.683,0.343,72350,0
GO:0018065,protein-cofactor_linkage,0.126%,-0.001,-4.816,4.209,0.883,0.346,18065,0
GO:0015970,guanosine_tetraphosphate_biosynthetic_process,0.001%,-5.713,0.271,2.104,0.681,0.349,15970,0
GO:0044249,cellular_biosynthetic_process,30.048%,-4.347,-2.452,6.586,0.771,0.349,44249,0
GO:0045903,positive_regulation_of_translational_fidelity,0.005%,-2.039,-3.955,2.842,0.748,0.368,45903,0
GO:0006810,transport,17.616%,5.105,4.153,6.354,0.886,0.378,6810,0
GO:0002790,peptide_secretion,0.041%,4.276,3.876,3.72,0.839,0.38,2790,0
GO:0006935,chemotaxis,0.475%,1.733,-1.875,4.785,0.947,0.383,6935,0
GO:0006952,defense_response,0.568%,1.704,-1.893,4.863,0.951,0.39,6952,0
GO:0072348,sulfur_compound_transport,0.249%,4.663,4.036,4.504,0.835,0.391,72348,0
GO:2001061,D-glycero-D-manno-heptose_7-phosphate_biosynthetic_process,0.008%,-2.196,-0.805,3.007,0.779,0.406,2001061,0
GO:0043571,maintenance_of_CRISPR_repeat_elements,0.052%,-1.08,-5.645,3.827,0.802,0.411,43571,0
GO:0090407,organophosphate_biosynthetic_process,4.110%,-4.278,-1.747,5.722,0.683,0.415,90407,0
GO:0018193,peptidyl-amino_acid_modification,1.495%,0.398,-6.387,5.283,0.857,0.434,18193,0
GO:0044255,cellular_lipid_metabolic_process,2.704%,-4.471,5.489,5.54,0.72,0.459,44255,0
GO:0001510,RNA_methylation,0.739%,-2.618,-5.927,4.977,0.801,0.46,1510,0
GO:0006884,cell_volume_homeostasis,0.009%,0.577,-1.03,3.039,0.78,0.465,6884,0
GO:0042372,phylloquinone_biosynthetic_process,0.006%,-5.701,3.066,2.915,0.709,0.467,42372,0
GO:0009196,pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process,0.043%,-5.497,1.583,3.741,0.639,0.478,9196,0
GO:0009139,pyrimidine_nucleoside_diphosphate_biosynthetic_process,0.043%,,,3.742,0.601,0.996,9196,1
GO:0006233,dTDP_biosynthetic_process,0.043%,,,3.737,0.575,0.997,9196,1
GO:0009189,deoxyribonucleoside_diphosphate_biosynthetic_process,0.043%,,,3.741,0.601,0.998,9196,1
GO:0009197,pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process,0.043%,,,3.741,0.601,0.999,9196,1
GO:0046072,dTDP_metabolic_process,0.043%,,,3.737,0.61,0.998,9196,1
GO:0032787,monocarboxylic_acid_metabolic_process,2.485%,-5.926,5.263,5.504,0.636,0.492,32787,0
GO:1901566,organonitrogen_compound_biosynthetic_process,14.064%,-5.793,-3.231,6.256,0.709,0.498,1901566,0
GO:0046903,secretion,0.810%,4.476,4.181,5.017,0.818,0.499,46903,0
GO:0006950,response_to_stress,4.575%,1.765,-1.921,5.769,0.949,0.501,6950,0
GO:0008360,regulation_of_cell_shape,0.640%,-1.361,1.277,4.914,0.699,0.503,8360,0
GO:0006355,"regulation_of_transcription,_DNA-templated",9.917%,-3.137,-4.119,6.105,0.611,0.509,6355,0
GO:0015074,DNA_integration,0.682%,-2.73,-6.044,4.942,0.807,0.51,15074,0
GO:0006313,"transposition,_DNA-mediated",0.413%,-4.814,-0.923,4.724,0.753,0.519,6313,0
GO:0009066,aspartate_family_amino_acid_metabolic_process,0.828%,-6.598,2.86,5.026,0.623,0.521,9066,0
GO:0008616,queuosine_biosynthetic_process,0.146%,-6.346,0.291,4.271,0.608,0.526,8616,0
GO:0006431,methionyl-tRNA_aminoacylation,0.055%,-5.881,-0.887,3.845,0.652,0.534,6431,0
GO:0009208,pyrimidine_ribonucleoside_triphosphate_metabolic_process,0.145%,-5.588,1.416,4.268,0.627,0.538,9208,0
GO:0009148,pyrimidine_nucleoside_triphosphate_biosynthetic_process,0.215%,,,4.441,0.57,0.944,9208,1
GO:0070814,hydrogen_sulfide_biosynthetic_process,0.058%,-2.112,-1.223,3.875,0.84,0.541,70814,0
GO:0006090,pyruvate_metabolic_process,0.817%,-5.556,4.861,5.021,0.661,0.547,6090,0
GO:0000160,phosphorelay_signal_transduction_system,2.570%,3.219,-1.735,5.518,0.788,0.547,160,0
GO:0043570,maintenance_of_DNA_repeat_elements,0.064%,-1.16,-5.662,3.914,0.799,0.557,43570,0
GO:0009088,threonine_biosynthetic_process,0.126%,-6.753,2.477,4.208,0.624,0.557,9088,0
GO:0022607,cellular_component_assembly,2.484%,1.556,-3.476,5.503,0.873,0.563,22607,0
GO:0006820,anion_transport,1.956%,5.224,4.162,5.4,0.867,0.57,6820,0
GO:0016116,carotenoid_metabolic_process,0.031%,-2.722,4.768,3.597,0.781,0.577,16116,0
GO:0016109,tetraterpenoid_biosynthetic_process,0.030%,,,3.583,0.708,0.998,16116,1
GO:0016117,carotenoid_biosynthetic_process,0.030%,,,3.583,0.691,0.998,16116,1
GO:0051051,negative_regulation_of_transport,0.089%,4.85,2.022,4.059,0.844,0.578,51051,0
GO:0006412,translation,5.686%,-5.063,-3.774,5.863,0.661,0.585,6412,0
GO:0046654,tetrahydrofolate_biosynthetic_process,0.101%,-6.314,0.945,4.113,0.615,0.59,46654,0
GO:0009107,lipoate_biosynthetic_process,0.066%,-6.481,2.095,3.926,0.597,0.594,9107,0
GO:0006430,lysyl-tRNA_aminoacylation,0.057%,-5.886,-0.881,3.867,0.651,0.596,6430,0
GO:0006310,DNA_recombination,1.641%,-3.164,-6.023,5.323,0.792,0.598,6310,0
GO:0046501,protoporphyrinogen_IX_metabolic_process,0.116%,-4.724,-3.072,4.174,0.76,0.598,46501,0
GO:0051302,regulation_of_cell_division,0.083%,-0.686,2.872,4.026,0.788,0.601,51302,0
GO:0046040,IMP_metabolic_process,0.418%,-5.936,0.466,4.73,0.583,0.604,46040,0
GO:0006605,protein_targeting,0.694%,4.468,3.904,4.949,0.889,0.609,6605,0
GO:0006811,ion_transport,5.344%,5.029,4.08,5.836,0.898,0.609,6811,0
GO:0006432,phenylalanyl-tRNA_aminoacylation,0.094%,-5.923,-0.85,4.082,0.639,0.618,6432,0
GO:0006108,malate_metabolic_process,0.088%,-5.51,4.888,4.051,0.711,0.62,6108,0
GO:0009138,pyrimidine_nucleoside_diphosphate_metabolic_process,0.044%,-5.576,1.614,3.752,0.655,0.637,9138,0
GO:0009106,lipoate_metabolic_process,0.066%,-6.092,3.033,3.927,0.638,0.641,9106,0
GO:0034036,purine_ribonucleoside_bisphosphate_biosynthetic_process,0.001%,-5.83,0.35,2.223,0.684,0.642,34036,0
GO:0046394,carboxylic_acid_biosynthetic_process,4.159%,-6.399,3.203,5.727,0.546,0.644,46394,0
GO:0008652,cellular_amino_acid_biosynthetic_process,2.932%,,,5.575,0.532,0.908,46394,1
GO:0022618,ribonucleoprotein_complex_assembly,0.364%,1.685,-3.623,4.669,0.878,0.644,22618,0
GO:0042255,ribosome_assembly,0.164%,,,4.322,0.883,0.924,22618,1
GO:0015991,ATP_hydrolysis_coupled_proton_transport,0.163%,5.254,4.227,4.321,0.801,0.644,15991,0
GO:0009133,nucleoside_diphosphate_biosynthetic_process,0.052%,-6.025,0.681,3.822,0.613,0.645,9133,0
GO:0034766,negative_regulation_of_ion_transmembrane_transport,0.012%,4.95,2.333,3.171,0.833,0.648,34766,0
GO:0071826,ribonucleoprotein_complex_subunit_organization,0.377%,1.792,-3.718,4.685,0.889,0.653,71826,0
GO:0044283,small_molecule_biosynthetic_process,5.677%,-6.304,2.41,5.862,0.611,0.654,44283,0
GO:0010205,photoinhibition,0.001%,3.35,-1.554,1.978,0.784,0.659,10205,0
GO:0015711,organic_anion_transport,1.192%,4.506,3.923,5.184,0.851,0.663,15711,0
GO:0031564,transcription_antitermination,0.076%,-2.484,-2.92,3.987,0.674,0.666,31564,0
GO:0070925,organelle_assembly,0.571%,1.083,-3.113,4.865,0.883,0.677,70925,0
GO:0006541,glutamine_metabolic_process,0.472%,-6.264,2.902,4.782,0.636,0.682,6541,0
GO:0009423,chorismate_biosynthetic_process,0.191%,-6.011,3.325,4.389,0.64,0.683,9423,0
GO:0044272,sulfur_compound_biosynthetic_process,1.235%,-3.454,-1.802,5.2,0.798,0.685,44272,0
GO:0006281,DNA_repair,2.234%,-2.102,-6.046,5.457,0.745,0.688,6281,0
GO:0030001,metal_ion_transport,1.677%,4.519,3.869,5.333,0.863,0.691,30001,0
GO:0000105,histidine_biosynthetic_process,0.360%,-6.356,1.04,4.664,0.595,0.691,105,0
GO:0006547,histidine_metabolic_process,0.420%,,,4.731,0.636,0.982,105,1
GO:0046488,phosphatidylinositol_metabolic_process,0.339%,-4.119,4.164,4.638,0.67,0.694,46488,0
GO:0019464,glycine_decarboxylation_via_glycine_cleavage_system,0.080%,-5.968,3.162,4.01,0.678,0.699,19464,0
GO:0070838,divalent_metal_ion_transport,0.358%,4.85,3.97,4.662,0.872,0.704,70838,0
GO:0006816,calcium_ion_transport,0.197%,,,4.404,0.878,0.93,70838,1
GO:0010206,photosystem_II_repair,0.002%,0.756,-3.547,2.502,0.893,0.704,10206,0
GO:0008272,sulfate_transport,0.150%,4.651,3.991,4.284,0.81,0.706,8272,0
GO:0009234,menaquinone_biosynthetic_process,0.107%,-6.218,3.096,4.136,0.653,0.724,9234,0
GO:0009073,aromatic_amino_acid_family_biosynthetic_process,0.540%,-6.842,0.918,4.841,0.583,0.725,9073,0
GO:0046390,ribose_phosphate_biosynthetic_process,1.778%,-4.357,-1.924,5.358,0.669,0.725,46390,0
GO:0071806,protein_transmembrane_transport,0.525%,4.945,4.059,4.829,0.884,0.726,71806,0
GO:0006084,acetyl-CoA_metabolic_process,0.172%,-2.325,0.006,4.343,0.769,0.731,6084,0
GO:0019253,reductive_pentose-phosphate_cycle,0.005%,-3.637,0.988,2.82,0.772,0.734,19253,0
GO:0016108,tetraterpenoid_metabolic_process,0.031%,-2.703,4.843,3.597,0.785,0.734,16108,0
GO:0009065,glutamine_family_amino_acid_catabolic_process,0.117%,-6.415,3.36,4.177,0.667,0.741,9065,0
GO:0046129,purine_ribonucleoside_biosynthetic_process,0.923%,-6.234,0.318,5.073,0.54,0.748,46129,0
GO:0006164,purine_nucleotide_biosynthetic_process,1.409%,,,5.257,0.505,0.964,46129,1
GO:0009145,purine_nucleoside_triphosphate_biosynthetic_process,0.485%,,,4.794,0.549,0.929,46129,1
GO:0009152,purine_ribonucleotide_biosynthetic_process,1.337%,,,5.234,0.5,0.919,46129,1
GO:0006754,ATP_biosynthetic_process,0.432%,,,4.743,0.525,0.916,46129,1
GO:0015986,ATP_synthesis_coupled_proton_transport,0.411%,,,4.722,0.439,0.97,46129,1
GO:0009206,purine_ribonucleoside_triphosphate_biosynthetic_process,0.485%,,,4.794,0.548,0.984,46129,1
GO:0009260,ribonucleotide_biosynthetic_process,1.734%,,,5.347,0.501,0.946,46129,1
GO:0006561,proline_biosynthetic_process,0.163%,-6.438,1.162,4.321,0.612,0.749,6561,0
GO:0032940,secretion_by_cell,0.763%,0.257,6.153,4.991,0.718,0.754,32940,0
GO:0009306,protein_secretion,0.529%,,,4.832,0.71,0.944,32940,1
GO:0009124,nucleoside_monophosphate_biosynthetic_process,1.486%,-6.058,0.329,5.28,0.518,0.755,9124,0
GO:0009165,nucleotide_biosynthetic_process,2.562%,,,5.517,0.497,0.903,9124,1
GO:0006614,SRP-dependent_cotranslational_protein_targeting_to_membrane,0.138%,1.388,4.54,4.249,0.704,0.756,6614,0
GO:0034220,ion_transmembrane_transport,3.528%,4.548,3.895,5.656,0.854,0.762,34220,0
GO:0051607,defense_response_to_virus,0.098%,1.886,-1.922,4.098,0.938,0.769,51607,0
GO:0006418,tRNA_aminoacylation_for_protein_translation,1.099%,-5.908,-0.708,5.149,0.565,0.773,6418,0
GO:0072330,monocarboxylic_acid_biosynthetic_process,0.940%,-6.687,3.543,5.081,0.595,0.776,72330,0
GO:0007346,regulation_of_mitotic_cell_cycle,0.269%,-1.117,3.402,4.537,0.762,0.781,7346,0
GO:0019752,carboxylic_acid_metabolic_process,8.831%,-5.742,4.807,6.054,0.588,0.781,19752,0
GO:0043436,oxoacid_metabolic_process,9.006%,,,6.063,0.588,0.902,19752,1
GO:0034763,negative_regulation_of_transmembrane_transport,0.014%,4.866,2.086,3.251,0.85,0.782,34763,0
GO:0006555,methionine_metabolic_process,0.358%,-6.071,2.679,4.662,0.619,0.784,6555,0
GO:0007165,signal_transduction,6.621%,3.187,-1.27,5.929,0.767,0.788,7165,0
GO:0042777,plasma_membrane_ATP_synthesis_coupled_proton_transport,0.083%,-2.308,2.985,4.027,0.496,0.788,42777,0
GO:0034762,regulation_of_transmembrane_transport,0.202%,4.935,2.24,4.414,0.836,0.788,34762,0
GO:0006364,rRNA_processing,0.952%,-2.334,-5.981,5.087,0.741,0.791,6364,0
GO:0044070,regulation_of_anion_transport,0.095%,5.143,2.397,4.085,0.821,0.792,44070,0
GO:0034765,regulation_of_ion_transmembrane_transport,0.197%,,,4.404,0.81,0.91,44070,1
GO:0046656,folic_acid_biosynthetic_process,0.053%,-6.348,1.135,3.837,0.613,0.797,46656,0
GO:0055080,cation_homeostasis,0.378%,4.221,-1.491,4.685,0.903,0.8,55080,0
GO:0065002,intracellular_protein_transmembrane_transport,0.276%,4.541,3.904,4.549,0.886,0.805,65002,0
GO:0006829,zinc_II_ion_transport,0.032%,4.921,3.826,3.608,0.892,0.806,6829,0
GO:0009767,photosynthetic_electron_transport_chain,0.025%,-1.979,2.951,3.501,0.812,0.808,9767,0
GO:0043271,negative_regulation_of_ion_transport,0.022%,4.773,2.256,3.445,0.831,0.81,43271,0
GO:0010563,negative_regulation_of_phosphorus_metabolic_process,0.182%,1.571,-0.832,4.368,0.771,0.811,10563,0
GO:0000096,sulfur_amino_acid_metabolic_process,0.539%,-5.967,2.554,4.84,0.626,0.818,96,0
GO:0006227,dUDP_biosynthetic_process,0.001%,-5.777,0.203,2.279,0.648,0.82,6227,0
GO:0046077,dUDP_metabolic_process,0.001%,-5.317,0.61,2.279,0.677,0.82,46077,0
GO:0006400,tRNA_modification,0.914%,-2.829,-5.629,5.069,0.776,0.824,6400,0
GO:0006505,GPI_anchor_metabolic_process,0.102%,-3.813,3.374,4.115,0.687,0.825,6505,0
GO:0006207,'de_novo'_pyrimidine_nucleobase_biosynthetic_process,0.192%,-6.345,0.403,4.392,0.606,0.825,6207,0
GO:0019856,pyrimidine_nucleobase_biosynthetic_process,0.241%,,,4.491,0.6,0.959,6207,1
GO:0009089,lysine_biosynthetic_process_via_diaminopimelate,0.288%,-6.741,2.293,4.567,0.593,0.828,9089,0
GO:0009168,purine_ribonucleoside_monophosphate_biosynthetic_process,1.043%,-5.965,0.367,5.127,0.524,0.833,9168,0
GO:0009127,purine_nucleoside_monophosphate_biosynthetic_process,1.044%,,,5.127,0.526,0.909,9168,1
GO:0009156,ribonucleoside_monophosphate_biosynthetic_process,1.394%,,,5.253,0.515,0.939,9168,1
GO:0006865,amino_acid_transport,0.813%,4.905,4.272,5.018,0.774,0.835,6865,0
GO:0044205,'de_novo'_UMP_biosynthetic_process,0.221%,-6.411,-0.042,4.452,0.545,0.835,44205,0
GO:0006415,translational_termination,0.201%,-4.476,-2.672,4.411,0.666,0.841,6415,0
GO:0016114,terpenoid_biosynthetic_process,0.245%,-5.367,3.228,4.498,0.667,0.842,16114,0
GO:0009615,response_to_virus,0.117%,2.306,-1.952,4.175,0.947,0.847,9615,0
GO:0098542,defense_response_to_other_organism,0.220%,,,4.45,0.942,0.9,9615,1
GO:0006235,dTTP_biosynthetic_process,0.052%,-6.087,0.064,3.824,0.578,0.849,6235,0
GO:0046075,dTTP_metabolic_process,0.052%,,,3.826,0.617,0.908,6235,1
GO:0006449,regulation_of_translational_termination,0.036%,-2.573,-2.906,3.667,0.669,0.851,6449,0
GO:0016053,organic_acid_biosynthetic_process,4.171%,-6.406,3.222,5.728,0.554,0.851,16053,0
GO:0000162,tryptophan_biosynthetic_process,0.191%,-6.309,1.111,4.389,0.61,0.853,162,0
GO:0043269,regulation_of_ion_transport,0.244%,4.787,2.358,4.496,0.817,0.853,43269,0
GO:0009236,cobalamin_biosynthetic_process,0.332%,-6.339,0.763,4.63,0.603,0.859,9236,0
GO:0009235,cobalamin_metabolic_process,0.336%,-6.04,1.429,4.634,0.661,0.86,9235,0
GO:0019288,"isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway",0.148%,-6.123,3.509,4.279,0.571,0.862,19288,0
GO:0008610,lipid_biosynthetic_process,2.123%,-5.886,2.212,5.435,0.648,0.865,8610,0
GO:0009233,menaquinone_metabolic_process,0.107%,-5.556,4.334,4.136,0.709,0.872,9233,0
GO:0006782,protoporphyrinogen_IX_biosynthetic_process,0.116%,-6.552,-0.364,4.172,0.641,0.872,6782,0
GO:0006351,"transcription,_DNA-templated",10.659%,-5.079,-4.358,6.136,0.669,0.876,6351,0
GO:0006779,porphyrin-containing_compound_biosynthetic_process,0.424%,-6.061,-3.331,4.736,0.69,0.878,6779,0
GO:0006783,heme_biosynthetic_process,0.244%,,,4.496,0.622,0.935,6779,1
GO:0042168,heme_metabolic_process,0.267%,,,4.535,0.685,0.942,6779,1
GO:0010564,regulation_of_cell_cycle_process,0.312%,-1.296,3.247,4.603,0.759,0.886,10564,0
GO:1901607,alpha-amino_acid_biosynthetic_process,2.557%,-6.566,1.64,5.516,0.53,0.889,1901607,0
GO:0019220,regulation_of_phosphate_metabolic_process,0.579%,1.566,-1.109,4.871,0.763,0.893,19220,0
GO:0006189,'de_novo'_IMP_biosynthetic_process,0.398%,-6.185,0.051,4.708,0.539,0.895,6189,0
GO:0006188,IMP_biosynthetic_process,0.417%,,,4.728,0.538,0.991,6189,1
GO:0009067,aspartate_family_amino_acid_biosynthetic_process,0.715%,-6.724,2.01,4.963,0.573,0.899,9067,0


key,scope,table,field,ordinal,category,comment,filtering,description,title,ordering,json_field_type,vocabulary_scope_ref,visibility,editability,data_type,display_type,display_options,edit_type,default,is_admin,value_template,required,view_groups,data_access_level,alphanumeric_sort
date_created,fields.screen,,,0,,,TRUE,"Date the screen was first recorded in the Screensaver database","Date Recorded",TRUE,,,[d;e],,date,,,,now,TRUE,,,[readEverythingAdmin],,
facility_id,fields.screen,,,1,,"Assigned by the facility",TRUE,"The facility specific ID for this screen","Screen ID",TRUE,,,[l;d;e],,string,link,"{ 'hrefTemplate': '#screen/{facility_id}' }",,,,,,,0,TRUE
screen_type,fields.screen,,,2,,,TRUE,"Screen type","Screen Type",TRUE,,screen.type,[l;d],[c],string,,,select,,,,TRUE,,0,
reconfirmation_screens,fields.screen,custom,,3,,,TRUE,"Reconfirmation screens","Reconfirmation Screens",TRUE,,,,,list,link,"{ 'hrefTemplate': '#screen/{__val__}', 'hideIfEmpty': true }",,,,,,,3,
primary_screen,fields.screen,custom,,4,,,TRUE,"Primary screen","Primary Screen",TRUE,,,,,string,link,"{ 'hrefTemplate': '#screen/{primary_screen}', 'hideIfEmpty': true }",,,,,,,3,
lab_head_id,fields.screen,,,5,Lab,,TRUE,"Lab head ID",Lab,TRUE,,,,[c;u],string,,"{ 'widthClass': 'col-sm-8' }",select,,TRUE,,TRUE,,0,
lab_head_username,fields.screen,custom,,9,Lab,"Alternate natural key that can be used to set this element",TRUE,"Lab head username","Lab Head Username",TRUE,,,[none],[c;u],string,link,"{ 'hrefTemplate': '#screensaveruser/{lab_head_id}' }",,,,,,[readEverythingAdmin],,
lab_name,fields.screen,,,6,Lab,,TRUE,"The name of the lab carrying out the screen","Lab Name",TRUE,,,[d],,string,link,"{ 'hrefTemplate': '#screensaveruser/{lab_head_id}' }",,,,,,,0,
lab_head_name,fields.screen,,,7,Lab,,TRUE,"The name of the user leading the lab","Lab Head",TRUE,,,[l],,string,link,"{ 'hrefTemplate': '#screensaveruser/{lab_head_id}' }",,,,,,,0,
lab_affiliation,fields.screen,,,8,Lab,,TRUE,"The affiliation of the lab carrying out the screen","Lab Affiliation",TRUE,,,[l],,string,,,,,,,,,0,
lead_screener_id,fields.screen,,,9,Lab,,TRUE,"The lead screener ID","Lead Screener ID",TRUE,,,,[c;u],string,link,"{ 'hrefTemplate': '#screensaveruser/{lead_screener_id}' }",select,,TRUE,,TRUE,,0,
lead_screener_username,fields.screen,custom,,9,Lab,"Alternate natural key that can be used to set this element",TRUE,"Lead screener username","Lead Screener Username",TRUE,,,[none],[c;u],string,link,"{ 'hrefTemplate': '#screensaveruser/{lead_screener_id}' }",,,,,,[readEverythingAdmin],,
lead_screener_name,fields.screen,,,10,Lab,,TRUE,"The scientist primarily responsible for running the screen","Lead Screener",TRUE,,,[l;d],,string,link,"{ 'hrefTemplate': '#screensaveruser/{lead_screener_id}' }",,,,,,,0,
title,fields.screen,,,11,,,TRUE,"The title of the screen",Title,TRUE,,,[l;d],[c;u],string,full_string,"{ 'widthClass': 'col-sm-10' }",,,,,TRUE,,0,
status,fields.screen,,,12,Admin,,TRUE,"The current status of the screen",Status,TRUE,,screen.status,[l;d;e],[c;u],string,,,select,,,,,,3,
status_date,fields.screen,,,13,Admin,,TRUE,"The date of the most recent change of status for the screen","Status Date",TRUE,,,[l;d],[c;u],date,,,,,,,,,3,
collaborator_ids,fields.screen,custom,,14,Lab,,TRUE,"Ids of collaborators",Collaborators,TRUE,,,[d],[c;u],list,link,"{ 'hrefTemplate': '#screensaveruser/{__val__}' }",multiselect3,,,,,,0,
collaborator_usernames,fields.screen,custom,,14,Lab,"Alternate natural key that can be used to set this element",TRUE,"Collaborator usernames","Collaborator Usernames",TRUE,,,[none],[c;u],list,link,"{ 'hrefTemplate': '#screensaveruser/{__val__}' }",,,,,,[readEverythingAdmin],,
collaborator_names,fields.screen,custom,,15,Lab,,TRUE,"Name and email of collaborators","Collaborator Names",TRUE,,,,,list,,,,,,,,,0,
date_of_application,fields.screen,,,16,Admin,,TRUE,"The date the application for the screen was submitted","Application Date",TRUE,,,[d],[c;u],date,,,,,TRUE,,,[readEverythingAdmin],,
data_meeting_complete,fields.screen,,,17,Admin,,TRUE,"The initial date the data meeting was completed","Initial Date Data Meeting Completed",TRUE,,,[d],[c;u],date,,,,,TRUE,,,[readEverythingAdmin],,
comments,fields.screen,,,18,Admin,,TRUE,"Administrative comments",Comments,TRUE,,,[d],[c;u],string,,"{ 'rows': 4 }",textarea,,TRUE,,,[readEverythingAdmin],,
summary,fields.screen,,,19,,,TRUE,"A summary of the screen",Summary,TRUE,,,[d],[c;u],string,,"{ 'rows': 4 }",textarea,,,,TRUE,,1,
study_type,fields.screen,,,20,Internal,,TRUE,"The study type (null for screens)","Study Type",TRUE,,study.type,,,string,,,,,TRUE,,,,0,
assay_type,fields.screen,,,21,,,TRUE,"The assay type of the screen","Assay Type",TRUE,,screen.assay_type,[d],[c;u],string,,"{ 'hideIfEmpty': true  }",select,,,,,,1,
species,fields.screen,,,22,Protocol,,TRUE,"The species of the cell organism",Species,TRUE,,screen.species,[d],[c;u],string,,"{ 'hideIfEmpty': true  }",select,,,,,,1,
cell_lines,fields.screen,,,23,Protocol,,TRUE,"The cell lines associated with this screen","Cell Lines",TRUE,,cell_line,[d],[c;u],list,,"{ 'hideIfEmpty': true  }",multiselect3,,,,,,1,
transfection_agent,fields.screen,,,24,Protocol,,TRUE,"The transfection agent","Transfection Agent",TRUE,,transfection_agent,[d],[c;u],string,,"{ 'hideIfEmpty': true  }",select,,,,,,1,
perturbagen_molar_concentration,fields.screen,,,25,Protocol,,TRUE,"Perturbagen (Molar) concentration","Perturbagen (Molar) Concentration",TRUE,,,[d;protocol],[c;u],decimal,siunit,"{ 'decimals': 1, 'multiplier': 1, 'symbol': 'M', 'defaultUnit': 1e-3, 'widthClass': 'col-sm-2', 'maxunit': 1e-3, 'minunit': 1e-6, 'hideIfEmpty': true }",,,,,,,1,
perturbagen_ug_ml_concentration,fields.screen,,,26,Protocol,"This field may be obsolete",TRUE,"Perturbagen concentration (ug/mL)","Perturbagen Concentration (ug/mL)",TRUE,,,[d;protocol],,decimal,,"{ 'decimals': 3, 'multiplier': 1e-6, 'hideIfEmpty': true }",,,,,,,1,
funding_supports,fields.screen,,,27,Admin,,TRUE,"The sources of funding support for the screen","Funding Supports",TRUE,,funding_support,[d],[c;u],list,,,multiselect3,,TRUE,,,[readEverythingAdmin],,
publishable_protocol,fields.screen,,,28,Protocol,,TRUE,"A publication-quality description of the protocol used for this screen",Protocol,TRUE,,,[protocol],[c;u],string,,"{ 'rows': 4 }",textarea,,,,,,1,
publishable_protocol_comments,fields.screen,,,29,Protocol,,TRUE,"Comments associated with the publishable protocol","Protocol Comment",TRUE,,,[protocol],[c;u],string,,,,,TRUE,,,[readEverythingAdmin],,
publishable_protocol_date_entered,fields.screen,,,30,Protocol,,TRUE,"The date the publishable protocol was entered","Protocol Date",TRUE,,,[protocol],[c;u],date,,,,,TRUE,,,[readEverythingAdmin],,
publishable_protocol_entered_by,fields.screen,,,31,Protocol,,TRUE,"The initial of the person that entered the publishable protocol","Protocol Entered By",TRUE,,,[protocol],[c;u],string,,,select,,TRUE,,,[readEverythingAdmin],,
data_sharing_level,fields.screen,,,32,"Data Sharing",,TRUE,"The data sharing level","Data Sharing Level",TRUE,,screen.data_sharing_level,[d],[c;u],integer,,"{ 'group': 'Screen Sharing' }",select,3,,,TRUE,,0,
data_privacy_expiration_date,fields.screen,,,33,"Data Sharing",,TRUE,"The date on which the screen will become visible to level 1 users, set automatically, 26 months after last Screening activity","Data Privacy Expiration Date",TRUE,,,[d;e],[u],date,,"{ 'group': 'Screen Sharing' }",,,TRUE,,,[readEverythingAdmin],,
min_allowed_data_privacy_expiration_date,fields.screen,,,34,"Data Sharing",,TRUE,"If set, this is the earliest date on which the Data Privacy can expire (optional)","Earliest Allowed Data Privacy Expiration Date",TRUE,,,[d],[c;u],date,,"{ 'group': 'Screen Sharing' }",,,TRUE,,,[readEverythingAdmin],,
max_allowed_data_privacy_expiration_date,fields.screen,,,35,"Data Sharing",,TRUE,"If set, this is the latest date on which the Data Privacy can expire (optional)","Latest Allowed Data Privacy Expiration Date",TRUE,,,[d],[c;u],date,,"{ 'group': 'Screen Sharing' }",,,TRUE,,,[readEverythingAdmin],,
data_privacy_expiration_notified_date,fields.screen,,,36,"Data Sharing",,TRUE,"Date at which the data privacy expiration notification was sent","Data Privacy Expiration Notification Sent Date",TRUE,,,[d],[u],date,,"{ 'group': 'Screen Sharing' }",,,TRUE,,,[readEverythingAdmin],,
publications,fields.screen,custom,,37,Protocol,,TRUE,Publications,Publications,TRUE,,,[protocol],,list,,,custom,,,,,,1,
publication_ids,fields.screen,custom,,37,Internal,,TRUE,"Publication IDs","Publication IDs",TRUE,,,,,list,,,,,TRUE,,,,,
attached_files,fields.screen,custom,,38,Admin,,TRUE,"Attached files","Attached Files",TRUE,,,[d],,list,,,custom,,TRUE,,,[readEverythingAdmin],,
pubchem_deposited_date,fields.screen,,,39,Protocol,,TRUE,"The date the screen result was deposited in PubChem BioAssay","PubChem BioAssay Date Deposited",TRUE,,,[protocol],[c;u],date,,"{ 'group': 'PubChem BioAssay' }",,,,,,,1,
pubchem_assay_id,fields.screen,,,40,Protocol,,TRUE,"The PubChem Assay identifier (AID)","PubChem Assay ID",TRUE,,,[protocol],[c;u],string,,"{ 'group': 'PubChem BioAssay', 'orderSeparator': '' }",,,,,,,1,
activity_count,fields.screen,custom,,45,Activity,,TRUE,"Count of activities","Activity Count",TRUE,,,[d],,integer,,,,,TRUE,,,[readEverythingAdmin],3,
date_of_first_screening_activity,fields.screen,,,46,Activity,,TRUE,"The date of the first lab activity performed for this screen","Date of First Screening Activity",TRUE,,,,,date,,,,,TRUE,,,[readEverythingAdmin],3,
date_of_last_activity,fields.screen,,,47,Activity,,TRUE,"The date of the last lab activity performed for this screen","Date of Last Activity",TRUE,,,,,date,,,,,TRUE,,,[readEverythingAdmin],3,
date_of_last_library_screening,fields.screen,,,48,Activity,,TRUE,"The date of the last library screening (excluding external plates)","Date of Last Library Screening",TRUE,,,,,date,,,,,TRUE,,,[readEverythingAdmin],3,
assay_readout_types,fields.screen,,,49,Summary,,TRUE,"The assay readout types used","Assay Readout Types",TRUE,,datacolumn.assay_readout_type,[d],,list,,,multiselect,,TRUE,,,,2,
has_screen_result,fields.screen,,,50,,,TRUE,"Screen result availability","Screen Result",TRUE,,screenresult.availability,[l;d],,string,,,select,,,,,,0,
library_screenings,fields.screen,custom,,151,Summary,,TRUE,"Library screenings recorded","# Library Screenings",TRUE,,,[summary],,integer,link,"{ 'hrefTemplate': '#screen/{facility_id}/activities/search/type__in=libraryscreening,externallibraryscreening' }",,,,,,,3,
libraries_screened_count,fields.screen,,,152,Summary,,TRUE,"The number of libraries that have been screened","Libraries Screened",TRUE,,,[summary],,integer,link,"{ 'hrefTemplate': '#screen/{facility_id}/summary/libraries' }",,,TRUE,,,,2,
unique_library_plates_screened,fields.screen,custom,,153,Summary,,TRUE,"Count of unique library plate numbers screened","Count of Unique Library Plate Numbers Screened",TRUE,,,[summary],,integer,link,"{ 'hrefTemplate': '#screen/{facility_id}/summary/plates' }",,,,,,,2,
library_plate_screening_count,fields.screen,custom,,154,Summary,,TRUE,"The total number of times that library plates have been screened (not including replicates)","Library Plate Screening Count",TRUE,,,[summary],,integer,link,"{ 'hrefTemplate': '#screen/{facility_id}/summary/plates' }",,,TRUE,,,,2,
unique_screened_experimental_well_count,fields.screen,,,155,Summary,,TRUE,"The number of unique experimental library wells that have been screened (count of unique well IDs)","Screening Count for Experimental Wells (unique)",TRUE,,,[summary],,integer,,,,,,,,,2,
screened_experimental_well_count,fields.screen,,,156,Summary,,TRUE,"The number of times that experimental library wells that have been screened (ignoring replicates)","Screening Count for Experimental Wells (Non-unique)",TRUE,,,[summary;d],,integer,,,,,TRUE,,,,2,
min_screened_replicate_count,fields.screen,custom,,157,Summary,,TRUE,"The min number of replicates that have been screened","Min Replicates Screened",TRUE,,,[summary],,integer,,,,,TRUE,,,,2,
max_screened_replicate_count,fields.screen,custom,,158,Summary,,TRUE,"The max number of replicates that have been screened","Max Replicates Screened",TRUE,,,[summary],,integer,,,,,TRUE,,,,2,
library_plates_data_loaded,fields.screen,,,159,Summary,,TRUE,"The number of library plates that have raw data loaded into the system","Library Plates Data Loaded",TRUE,,,[summary],,integer,,,,,TRUE,,,,2,
experimental_well_count,fields.screen,screen_result,,160,Summary,,TRUE,"The number of unique experimental wells for which data have been loaded","Experimental Wells Loaded (unique)",TRUE,,,[summary],,integer,,,,,,,,,2,
last_data_loading_date,fields.screen,screen_result,date_loaded,161,Summary,,TRUE,"The date the current screen results were loaded into the database","Last Data Loading Date",TRUE,,,[summary],,date,link,"{ 'hrefTemplate': '#apilog/order/-date_time/search/ref_resource_name=screen;key={facility_id};diff_keys__contains=last_data_loading_date' }",,,TRUE,,,,2,
total_plated_lab_cherry_picks,fields.screen,,,162,Summary,,TRUE,"The number of lab cherry picks that have been plated to date, for all cherry pick requests","Total Plated Lab Cherry Picks",TRUE,,,[summary],,integer,,,,,TRUE,,,,3,
assay_plates_screened,fields.screen,,,163,Summary,,TRUE,"The number of assay plates that have been screened","Assay Plates Screened",TRUE,,,,,integer,,,,,TRUE,,,,2,
cherry_pick_screenings,fields.screen,custom,,164,Summary,,TRUE,"Number of cherry pick screenings recorded","# Cherry Pick Screenings",TRUE,,,,,integer,link,"{ 'hrefTemplate': '#screen/{facility_id}/activities/search/type__in=cherrypickscreening' }",,,TRUE,,,,3,
positives_summary,fields.screen,custom,,165,Summary,,TRUE,"Summary of positives","Positives Summary",TRUE,,,[summary],,string,,,,,,,,,2,
to_be_requested,fields.screen,,,300,Billing,,TRUE,"Billing information to be requested","Billing Information to be Requested",TRUE,,,[billing],[u],boolean,,,,,TRUE,,,[screenBillingView],,
see_comments,fields.screen,,,301,Billing,,TRUE,"See comments","See Billing Comments",TRUE,,,[billing],[u],boolean,,,,,TRUE,,,[screenBillingView],,
is_billing_for_supplies_only,fields.screen,,,302,Billing,,TRUE,"Billing for supplies only","Billing for Supplies Only",TRUE,,,[billing],[u],boolean,,,,,TRUE,,,[screenBillingView],,
is_fee_form_on_file,fields.screen,,,303,Billing,,TRUE,"Fee form on file","Fee Form on File",TRUE,,,[billing],[u],boolean,,,,,TRUE,,,[screenBillingView],,
amount_to_be_charged_for_screen,fields.screen,,,304,Billing,,TRUE,"Amount to be charged for screen","Amount to be Charged for Screen",TRUE,,,[billing],[u],decimal,,,,,TRUE,,,[screenBillingView],,
facilities_and_administration_charge,fields.screen,,,305,Billing,,TRUE,"Facilities & administration charge","Facilities & Administration Charge",TRUE,,,[billing],[u],decimal,,,,,TRUE,,,[screenBillingView],,
fee_form_requested_date,fields.screen,,,306,Billing,,TRUE,"Fee form requested date","Fee Form Requested Date",TRUE,,,[billing],[u],date,,,,,TRUE,,,[screenBillingView],,
fee_form_requested_initials,fields.screen,,,307,Billing,,TRUE,"Fee form requested initials","Fee Form Requested Initials",TRUE,,,[billing],[u],string,,,,,TRUE,,,[screenBillingView],,
billing_info_return_date,fields.screen,,,308,Billing,,TRUE,"Billing info return date","Billing Info Return Date",TRUE,,,[billing],[u],date,,,,,TRUE,,,[screenBillingView],,
date_completed5kcompounds,fields.screen,,,309,Billing,,TRUE,"Date completed 5k compounds","Date Completed 5k Compounds",TRUE,,,[billing],[u],date,,,,,TRUE,,,[screenBillingView],,
date_faxed_to_billing_department,fields.screen,,,310,Billing,,TRUE,"Date faxed to billing department","Date Faxed to Billing Department",TRUE,,,[billing],[u],date,,,,,TRUE,,,[screenBillingView],,
date_charged,fields.screen,,,311,Billing,,TRUE,"Date charged","Date Charged",TRUE,,,[billing],[u],date,,,,,TRUE,,,[screenBillingView],,
billing_comments,fields.screen,,,312,Billing,,TRUE,Comments,Comments,TRUE,,,[billing],[u],string,,,textarea,,TRUE,,,[screenBillingView],,
screen_id,fields.screen,custom,,999,,,TRUE,"Internal screen ID","Internal Screen ID",TRUE,,,[none],,string,,"{ 'orderSeparator': '' }",,,,,,,0,
screensaver_user_role,fields.screen,custom,,92,Internal,,TRUE,"Role of the provided screener","User Role",TRUE,,screen.user_role,,,string,,,select,,TRUE,,,,,
keywords,fields.screen,custom,,65,Internal,,TRUE,"A set of keywords associated with the screen",Keywords,TRUE,,,,,list,,,textarea,,TRUE,,,,3,
coms_registration_number,fields.screen,,,35,Admin,,TRUE,"COMS number, provided by PI's lab","COMS Registration Number",TRUE,,,,,string,,,,,TRUE,,,[readEverythingAdmin],,
coms_approval_date,fields.screen,,,36,Admin,,TRUE,"The date of approval by COMS or the date on which we determine that our existing approval already covers the proposed experiments","ICCB-L COMS Approval Date",TRUE,,,,,date,,,,,TRUE,,,[readEverythingAdmin],,
overlapping_positive_screens,fields.screen,custom,,401,"Data Sharing",,TRUE,"Screens having at least one positive result for a positive well for this Screen","Overlapping Positives Screens",TRUE,,,[],,list,link,"{ 'hrefTemplate': '#screen/{__val__}' }",,,,,,,2,
user_access_level_granted,fields.screen,custom,,402,"Data Sharing","Dynamically calculated for each Screen the current User is viewing; null if the User is an admin",FALSE,"Access level granted for viewing this screen","User Screen Access Level",FALSE,,field.data_access_level,[api],,integer,,,,,,,,,0,


cv,name,description,dbxref,is_obsolete,is_relationship
NCBI_assembly,anomalouslist,NA,NULL,0,0
NCBI_assembly,asmreleasedate_genbank,Date the GenBankassembly was first released,NULL,0,0
NCBI_assembly,asmreleasedate_refseq,Date the RefSeq assembly was first released,NULL,0,0
NCBI_assembly,asmupdatedate,Date the assembly was last updated,NULL,0,0
NCBI_assembly,assemblyaccession,Space delimited assembly accessions w/ & w/o versions,NULL,0,0
NCBI_assembly,assemblyclass,NA,NULL,0,0
NCBI_assembly,assemblydescription,Assembly description,NULL,0,0
NCBI_assembly,assemblyname,Assembly name,NULL,0,0
NCBI_assembly,assemblystatus,NA,NULL,0,0
NCBI_assembly,assemblytype,Type of the assembly,NULL,0,0
NCBI_assembly,biosampleaccn,BioSample Accession and Id,NULL,0,0
NCBI_assembly,biosampleid,BioSample Accession and Id,NULL,0,0
NCBI_assembly,biosource,NA,NULL,0,0
NCBI_assembly,biosource.infraspecieslist,NA,NULL,0,0
NCBI_assembly,biosource.isolate,Isolate name,NULL,0,0
NCBI_assembly,biosource.sec,sex,NULL,0,0
NCBI_assembly,chainid,NA,NULL,0,0
NCBI_assembly,contign50,Contig length at which 50% of total bases in assembly are in contigs of that length or greater,NULL,0,0
NCBI_assembly,coverage,Sequencing coverage,NULL,0,0
NCBI_assembly,ensemblname,NA,NULL,0,0
NCBI_assembly,exclfromrefseq,Reasons assembly was excluded from RefSeq,NULL,0,0
NCBI_assembly,fromtype,From Type Material,NULL,0,0
NCBI_assembly,ftppath_assembly_rpt,NA,NULL,0,0
NCBI_assembly,ftppath_genbank,NA,NULL,0,0
NCBI_assembly,ftppath_refseq,NA,NULL,0,0
NCBI_assembly,ftppath_regions_rpt,NA,NULL,0,0
NCBI_assembly,ftppath_stats_rpt,NA,NULL,0,0
NCBI_assembly,gb_bioprojects,Uid and accessions of this assembly's projects,NULL,0,0
NCBI_assembly,gb_bioprojects.bioprojectaccn,Uid and accessions of this assembly's projects,NULL,0,0
NCBI_assembly,gb_bioprojects.bioprojectid,Uid and accessions of this assembly's projects,NULL,0,0
NCBI_assembly,gb_projects,NA,NULL,0,0
NCBI_assembly,gbuid,Id of GenBank synonym of this Assembly.,NULL,0,0
NCBI_assembly,lastmajorreleaseaccession,NA,NULL,0,0
NCBI_assembly,lastupdatedate,Date the assembly was last updated,NULL,0,0
NCBI_assembly,latestaccession,NA,NULL,0,0
NCBI_assembly,meta,NA,NULL,0,0
NCBI_assembly,organism,Exploded organism names,NULL,0,0
NCBI_assembly,partialgenomerepresentation,NA,NULL,0,0
NCBI_assembly,primary,NA,NULL,0,0
NCBI_assembly,propertylist,Properties,NULL,0,0
NCBI_assembly,refseq_category,RefSeq Category,NULL,0,0
NCBI_assembly,releaselevel,NA,NULL,0,0
NCBI_assembly,releasetype,Release Type,NULL,0,0
NCBI_assembly,rs_bioprojects,NA,NULL,0,0
NCBI_assembly,rs_projects,NA,NULL,0,0
NCBI_assembly,rsuid,Id of RefSeq Assembly.,NULL,0,0
NCBI_assembly,scaffoldn50,Scaffold length at which 50% of total bases in assembly are in contigs of that length or greater,NULL,0,0
NCBI_assembly,seqreleasedate,Date the most recent sequence went live in ID,NULL,0,0
NCBI_assembly,sortorder,NA,NULL,0,0
NCBI_assembly,speciesname,NA,NULL,0,0
NCBI_assembly,speciestaxid,NA,NULL,0,0
NCBI_assembly,submissiondate,NA,NULL,0,0
NCBI_assembly,submitterorganization,Organization that submitted this assembly,NULL,0,0
NCBI_assembly,synonym,NA,NULL,0,0
NCBI_assembly,synonym.genbank,Id of GenBank synonym of this Assembly.,NULL,0,0
NCBI_assembly,synonym.refseq,NA,NULL,0,0
NCBI_assembly,synonym.similarity,NA,NULL,0,0
NCBI_assembly,taxid,Taxonomy ID,NULL,0,0
NCBI_assembly,ucscname,NA,NULL,0,0
NCBI_assembly,uid,Unique number assigned to publication,NULL,0,0
NCBI_assembly,wgs,WGS Master,NULL,0,0

SRA_ Number,Experiment Accession,Experiment Title,Organism Name,Instrument,Submitter,Study Accession,Study Title,Sample Accession,Sample Title,"Total Size, Mb",Total RUNs,Total Spots,Total Bases,Library Name,Library Strategy,Library Source,Library Selection
SRR3989712,SRX1991250,Whole genome shotgun sequencing of Escherichia coli serovar O145 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594050,,268.76,1,5374063,785407836,Escherichia coli serovar O145 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989713,SRX1991251,Whole genome shotgun sequencing of Escherichia coli serovar O18:H14 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594051,,219.26,1,4369672,638122991,Escherichia coli serovar O18:H14 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989714,SRX1991253,Whole genome shotgun sequencing of Escherichia coli serovar O1:H48 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594053,,202.61,1,3998763,588541619,Escherichia coli serovar O1:H48 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989715,SRX1991254,Whole genome shotgun sequencing of Escherichia coli serovar O1:H1 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594054,,240.11,1,4823901,703730591,Escherichia coli serovar O1:H1 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989716,SRX1991255,Whole genome shotgun sequencing of Escherichia coli serovar O13:H30 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594055,,272.76,1,5456182,804500193,Escherichia coli serovar O13:H30 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989717,SRX1991259,Whole genome shotgun sequencing of Escherichia coli serovar O91:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594059,,271.66,1,5444783,804284383,Escherichia coli serovar O91:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989718,SRX1991260,Whole genome shotgun sequencing of Escherichia coli serovar O68:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594060,,352.94,1,7089834,1043970551,Escherichia coli serovar O68:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989719,SRX1991262,Whole genome shotgun sequencing of Escherichia coli serovar O53:H56 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594061,,279.49,1,5609258,826655358,Escherichia coli serovar O53:H56 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989720,SRX1991264,Whole genome shotgun sequencing of Escherichia coli serovar O149:H18 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594064,,273.6,1,5456181,803490248,Escherichia coli serovar O149:H18 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989721,SRX1991266,Whole genome shotgun sequencing of Escherichia coli serovar O2:H56 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594065,,380.51,1,7735873,1132513100,Escherichia coli serovar O2:H56 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989722,SRX1991268,Whole genome shotgun sequencing of Escherichia coli serovar O8:H19 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594068,,397.18,1,8103879,1179749037,Escherichia coli serovar O8:H19 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989723,SRX1991270,Whole genome shotgun sequencing of Escherichia coli serovar O156:H56 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594070,,169.65,1,3361180,492787848,Escherichia coli serovar O156:H56 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989724,SRX1991271,Whole genome shotgun sequencing of Escherichia coli serovar O2:H56 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594071,,172.57,1,3448526,503059778,Escherichia coli serovar O2:H56 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989725,SRX1991276,Whole genome shotgun sequencing of Escherichia coli serovar O21:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594076,,183.25,1,3608059,531197172,Escherichia coli serovar O21:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989726,SRX1991277,Whole genome shotgun sequencing of Escherichia coli serovar O68:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594077,,217.5,1,4310398,633523569,Escherichia coli serovar O68:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989727,SRX1991278,Whole genome shotgun sequencing of Escherichia coli serovar O103:H56 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594078,,183.33,1,3536284,517238745,Escherichia coli serovar O103:H56 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989728,SRX1991279,Whole genome shotgun sequencing of Escherichia coli serovar O43:H2 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594079,,168.64,1,3242202,474423086,Escherichia coli serovar O43:H2 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989729,SRX1991282,Whole genome shotgun sequencing of Escherichia coli serovar O43:H2 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594081,,192.98,1,3750824,546880596,Escherichia coli serovar O43:H2 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989730,SRX1991283,Whole genome shotgun sequencing of Escherichia coli serovar O2:H57 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594082,,167.87,1,3253720,473836195,Escherichia coli serovar O2:H57 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989731,SRX1991284,Whole genome shotgun sequencing of Escherichia coli serovar O53:H57 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594084,,214.89,1,4141131,607261015,Escherichia coli serovar O53:H57 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989732,SRX1991285,Whole genome shotgun sequencing of Escherichia coli serovar O73:H34 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594085,,222,1,4328076,629730962,Escherichia coli serovar O73:H34 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989733,SRX1991286,Whole genome shotgun sequencing of Escherichia coli serovar O17 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594086,,388.66,1,7100724,1032042939,Escherichia coli serovar O17 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989734,SRX1991297,Whole genome shotgun sequencing of Escherichia coli serovar O158 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594095,,290.31,1,5310719,773584725,Escherichia coli serovar O158 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989735,SRX1991298,Whole genome shotgun sequencing of Escherichia coli serovar O105 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594096,,248.56,1,4535346,659429532,Escherichia coli serovar O105 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989736,SRX1991300,Whole genome shotgun sequencing of Escherichia coli serovar O141 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594100,,468.83,1,8586293,1245618107,Escherichia coli serovar O141 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989737,SRX1991301,Whole genome shotgun sequencing of Escherichia coli serovar O49 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594101,,378.21,1,6919597,1008264377,Escherichia coli serovar O49 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989738,SRX1991303,Whole genome shotgun sequencing of Escherichia coli serovar O59 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594103,,397.8,1,7296255,1057393288,Escherichia coli serovar O59 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989739,SRX1991305,Whole genome shotgun sequencing of Escherichia coli serovar O3 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594104,,509.74,1,9399594,1362778401,Escherichia coli serovar O3 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989740,SRX1991306,Whole genome shotgun sequencing of Escherichia coli serovar O29 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594105,,763.87,1,14246697,2053664208,Escherichia coli serovar O29 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989741,SRX1991313,Whole genome shotgun sequencing of Escherichia coli serovar O36 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594113,,508.84,1,9379922,1361596880,Escherichia coli serovar O36 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989742,SRX1991314,Whole genome shotgun sequencing of Escherichia coli serovar O79 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594114,,555.5,1,10254120,1485433243,Escherichia coli serovar O79 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989743,SRX1991315,Whole genome shotgun sequencing of Escherichia coli serovar O81 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594115,,513.53,1,9539741,1382972506,Escherichia coli serovar O81 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989744,SRX1991316,Whole genome shotgun sequencing of Escherichia coli serovar O75 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594116,,416.44,1,7693681,1119256054,Escherichia coli serovar O75 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989745,SRX1991317,Whole genome shotgun sequencing of Escherichia coli serovar O111 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594117,,346.69,1,6319116,921896004,Escherichia coli serovar O111 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989746,SRX1991318,Whole genome shotgun sequencing of Escherichia coli serovar O7 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594118,,515.13,1,9527487,1381505744,Escherichia coli serovar O7 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989747,SRX1991319,Whole genome shotgun sequencing of Escherichia coli serovar O135 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594119,,350.24,1,6444037,937317293,Escherichia coli serovar O135 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989748,SRX1991320,Whole genome shotgun sequencing of Escherichia coli serovar O124 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594120,,358.79,1,6655299,967387997,Escherichia coli serovar O124 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989749,SRX1991321,Whole genome shotgun sequencing of Escherichia coli serovar O153:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594121,,527.11,1,9824231,1423361307,Escherichia coli serovar O153:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989750,SRX1991322,Whole genome shotgun sequencing of Escherichia coli serovar OX23:H38 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594122,,671.38,1,12448576,1805152432,Escherichia coli serovar OX23:H38 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989751,SRX1991323,Whole genome shotgun sequencing of Escherichia coli serovar O46:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594123,,461.07,1,8481089,1235439481,Escherichia coli serovar O46:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989752,SRX1991324,Whole genome shotgun sequencing of Escherichia coli serovar O7:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594124,,535.47,1,9900500,1436964693,Escherichia coli serovar O7:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989753,SRX1991325,Whole genome shotgun sequencing of Escherichia coli serovar O149:H9 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594125,,232.07,1,3855603,561564441,Escherichia coli serovar O149:H9 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989754,SRX1991326,Whole genome shotgun sequencing of Escherichia coli serovar OX08 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594126,,765.58,1,14338676,2071237399,Escherichia coli serovar OX08 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989755,SRX1991328,Whole genome shotgun sequencing of Escherichia coli serovar O5:H32 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594128,,413.31,1,7603968,1108530662,Escherichia coli serovar O5:H32 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989756,SRX1991329,Whole genome shotgun sequencing of Escherichia coli serovar O4 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594129,,557.47,1,10376946,1504630505,Escherichia coli serovar O4 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989757,SRX1991330,Whole genome shotgun sequencing of Escherichia coli serovar O4:H42 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594130,,319.08,1,5834113,852799543,Escherichia coli serovar O4:H42 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989758,SRX1991331,Whole genome shotgun sequencing of Escherichia coli serovar O116 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594131,,440.32,1,8053843,1174228397,Escherichia coli serovar O116 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989759,SRX1991333,Whole genome shotgun sequencing of Escherichia coli serovar O78:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594133,,429.81,1,7894929,1151744302,Escherichia coli serovar O78:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989760,SRX1991335,Whole genome shotgun sequencing of Escherichia coli serovar O88:H52 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594135,,302.87,1,5517522,804757459,Escherichia coli serovar O88:H52 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989761,SRX1991336,Whole genome shotgun sequencing of Escherichia coli serovar O144:H42 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594136,,424.4,1,7795331,1138900240,Escherichia coli serovar O144:H42 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989762,SRX1991337,Whole genome shotgun sequencing of Escherichia coli serovar O85:H1 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594137,,386.68,1,7078141,1032609220,Escherichia coli serovar O85:H1 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989763,SRX1991338,Whole genome shotgun sequencing of Escherichia coli serovar O20:H27 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594138,,365.87,1,6740738,980385602,Escherichia coli serovar O20:H27 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989764,SRX1991339,Whole genome shotgun sequencing of Escherichia coli serovar O172:H23 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594139,,316.48,1,5768980,843603459,Escherichia coli serovar O172:H23 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989765,SRX1991340,Whole genome shotgun sequencing of Escherichia coli serovar O162 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594140,,327.18,1,6010083,874104524,Escherichia coli serovar O162 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989766,SRX1991341,Whole genome shotgun sequencing of Escherichia coli serovar O33:H30 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594141,,521.15,1,9630788,1400454385,Escherichia coli serovar O33:H30 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989767,SRX1991342,Whole genome shotgun sequencing of Escherichia coli serovar O132:H42 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594142,,342.74,1,6303273,918256474,Escherichia coli serovar O132:H42 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989768,SRX1991343,Whole genome shotgun sequencing of Escherichia coli serovar OX28:H11 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594143,,359.92,1,6601784,962706076,Escherichia coli serovar OX28:H11 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989769,SRX1991344,Whole genome shotgun sequencing of Escherichia coli serovar O22:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594144,,903.21,1,16104601,2376029016,Escherichia coli serovar O22:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989770,SRX1991345,Whole genome shotgun sequencing of Escherichia coli serovar O163:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594145,,603.65,1,10805360,1594542971,Escherichia coli serovar O163:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989771,SRX1991346,Whole genome shotgun sequencing of Escherichia coli serovar O87:H25 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594146,,607,1,10661958,1576569704,Escherichia coli serovar O87:H25 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989772,SRX1991348,Whole genome shotgun sequencing of Escherichia coli serovar O19:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594147,,601.33,1,10563325,1563623969,Escherichia coli serovar O19:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989773,SRX1991351,Whole genome shotgun sequencing of Escherichia coli serovar O174:H16 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594151,,447.2,1,7766435,1150451471,Escherichia coli serovar O174:H16 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989774,SRX1991352,Whole genome shotgun sequencing of Escherichia coli serovar O118:H27 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594152,,695.53,1,12203170,1805313134,Escherichia coli serovar O118:H27 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989776,SRX1991355,Whole genome shotgun sequencing of Escherichia coli serovar O60:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594154,,577.06,1,10072784,1489908266,Escherichia coli serovar O60:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989777,SRX1991356,Whole genome shotgun sequencing of Escherichia coli serovar OX28:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594156,,754.96,1,13280304,1965349275,Escherichia coli serovar OX28:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989778,SRX1991357,Whole genome shotgun sequencing of Escherichia coli serovar O6:H39 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594157,,622.95,1,11063774,1635031215,Escherichia coli serovar O6:H39 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989779,SRX1991361,Whole genome shotgun sequencing of Escherichia coli serovar O69:H38 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594161,,413.21,1,7178675,1061656127,Escherichia coli serovar O69:H38 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989780,SRX1991363,Whole genome shotgun sequencing of Escherichia coli serovar O29 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594163,,395.93,1,6978481,1032383321,Escherichia coli serovar O29 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989781,SRX1991365,Whole genome shotgun sequencing of Escherichia coli serovar O20:H3 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594165,,282.17,1,4874557,721704737,Escherichia coli serovar O20:H3 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989782,SRX1991366,Whole genome shotgun sequencing of Escherichia coli serovar O85:H16 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594164,,453.96,1,7890948,1167363498,Escherichia coli serovar O85:H16 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989783,SRX1991367,Whole genome shotgun sequencing of Escherichia coli serovar O16:H27 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594167,,459.4,1,7966140,1179885922,Escherichia coli serovar O16:H27 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989784,SRX1991368,Whole genome shotgun sequencing of Escherichia coli serovar OX23 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594168,,475.26,1,8301821,1227584910,Escherichia coli serovar OX23 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989785,SRX1991369,Whole genome shotgun sequencing of Escherichia coli serovar OX23 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594169,,506.53,1,8743077,1291019033,Escherichia coli serovar OX23 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989786,SRX1991371,Whole genome shotgun sequencing of Escherichia coli serovar O43 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594171,,459.11,1,7994883,1183432838,Escherichia coli serovar O43 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989787,SRX1991372,Whole genome shotgun sequencing of Escherichia coli serovar O13:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594172,,754.6,1,13156987,1949202853,Escherichia coli serovar O13:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989788,SRX1991373,Whole genome shotgun sequencing of Escherichia coli serovar O116:H35 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594173,,493.11,1,8526715,1262884954,Escherichia coli serovar O116:H35 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989789,SRX1991375,Whole genome shotgun sequencing of Escherichia coli serovar O136:H15 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594175,,595.48,1,10330595,1529072903,Escherichia coli serovar O136:H15 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989790,SRX1991376,Whole genome shotgun sequencing of Escherichia coli serovar OX23 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594176,,817.57,1,14819487,2161433337,Escherichia coli serovar OX23 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989791,SRX1991377,Whole genome shotgun sequencing of Escherichia coli serovar O116:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594177,,1076.8,1,19621239,2876200022,Escherichia coli serovar O116:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989792,SRX1991378,Whole genome shotgun sequencing of Escherichia coli serovar O101:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594178,,983.59,1,17890910,2615359850,Escherichia coli serovar O101:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989793,SRX1991380,Whole genome shotgun sequencing of Escherichia coli serovar O96:H9 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594180,,888.32,1,15926409,2352484388,Escherichia coli serovar O96:H9 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989794,SRX1991381,Whole genome shotgun sequencing of Escherichia coli serovar O96:H9 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594181,,641.31,1,11349482,1678874580,Escherichia coli serovar O96:H9 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989795,SRX1991382,Whole genome shotgun sequencing of Escherichia coli serovar O135 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594182,,763.67,1,13460641,1986228018,Escherichia coli serovar O135 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989796,SRX1991427,Whole genome shotgun sequencing of Escherichia coli serovar O96:H9 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594206,,644.83,1,11368005,1679725386,Escherichia coli serovar O96:H9 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989797,SRX1991429,Whole genome shotgun sequencing of Escherichia coli serovar O51:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594208,,797.06,1,14420326,2127942629,Escherichia coli serovar O51:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989798,SRX1991430,Whole genome shotgun sequencing of Escherichia coli serovar O124:H38 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594209,,618.3,1,10915030,1615739029,Escherichia coli serovar O124:H38 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989799,SRX1991431,Whole genome shotgun sequencing of Escherichia coli serovar O55:H15 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594210,,605.38,1,10574016,1564900780,Escherichia coli serovar O55:H15 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989800,SRX1991432,Whole genome shotgun sequencing of Escherichia coli serovar O73:H43 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594211,,634.32,1,11279057,1668926907,Escherichia coli serovar O73:H43 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989801,SRX1991433,Whole genome shotgun sequencing of Escherichia coli serovar O158:H7 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594212,,408.24,1,6873110,1016337073,Escherichia coli serovar O158:H7 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989802,SRX1991434,Whole genome shotgun sequencing of Escherichia coli serovar O43:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594213,,341.72,1,5779606,850822481,Escherichia coli serovar O43:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989803,SRX1991435,Whole genome shotgun sequencing of Escherichia coli serovar O88:H43 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594214,,514.61,1,8815528,1303848644,Escherichia coli serovar O88:H43 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989804,SRX1991445,Whole genome shotgun sequencing of Escherichia coli serovar O163 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594224,,386.92,1,6535627,961764056,Escherichia coli serovar O163 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989805,SRX1991447,Whole genome shotgun sequencing of Escherichia coli serovar O128:H35 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594225,,300.71,1,5107719,748066884,Escherichia coli serovar O128:H35 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989806,SRX1991448,Whole genome shotgun sequencing of Escherichia coli serovar O162 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594226,,402.57,1,6806726,1002660172,Escherichia coli serovar O162 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989807,SRX1991451,Whole genome shotgun sequencing of Escherichia coli serovar O20:H11 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594230,,354.74,1,6028097,885113318,Escherichia coli serovar O20:H11 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989808,SRX1991453,Whole genome shotgun sequencing of Escherichia coli serovar O57 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594231,,484.79,1,8075342,1191312271,Escherichia coli serovar O57 Nextera XT shotgun,WGS,GENOMIC,RANDOM


origin,gold,ours,precision,recall,f-score,type
Its my birthday tomorrow .,It 's my birthday tomorrow .,My birthday is tomorrow .,0.0,0.0,0.0,
The goal of occupational safety and health program are to foster safe and healthy work environment .,The goal of an occupational safety and health program is to foster a safe and healthy work environment .,The goal of occupational safety and health programs is to foster a safe and healthy work environment .,0.6666666666666666,0.6666666666666666,0.6666666666666666,
The research and regulation to occupation safety and health is a relative recent phenomenon .,The research and regulation of occupational safety and health are a relatively recent phenomenon .,The research and regulation of occupation safety and health is a relatively recent phenomenon .,1.0,0.5,0.8333333333333334,
Have you stop beating you wife ?,Have you stopped beating your wife ?,Have you stopped beating your wife ?,1.0,1.0,1.0,
Does the state have the right to censor pronography or restrict tobacco advertising ?,Does the state have the right to censor pornography or restrict tobacco advertising ?,Does the state have the right to censor pornography or restrict tobacco advertising ?,1.0,1.0,1.0,
The commission sparked public outrage resulted on the Mines Act in 1842 .,The commission sparked public outrage which resulted in the Mines Act of 1842 .,The commission sparked public outrage that resulted in the Mines Act in 1842 .,0.5,0.3333333333333333,0.45454545454545453,
"This fallow period is shortened if population density grows , require the input of nutrient and some manual pest control .","This fallow period is shortened if population density grows , requiring the input of nutrients and some manual pest control .","This fallow period is shortened if population density grows , requiring the input of nutrient and some manual pest control .",1.0,0.5,0.8333333333333334,
"Non-meat animals , such as millk cows and egg-producing chickens , also shown significance production increases .","Non-meat animals , such as milk cows and egg-producing chickens , also showed significant production increases .","Non-meat animals , such as mills cows and egg-producing chickens , have also shown significant production increases .",0.3333333333333333,0.3333333333333333,0.3333333333333333,
"These system is particularly important in areas where crop production is not feasible because climate or soil , representing 30–40 million pastoralists .","This system is particularly important in areas where crop production is not feasible because of climate or soil , representing 30–40 million pastoralists .","These systems are particularly important in areas where crop production is not feasible because of climate or soil , representing 30–40 million pastoralists .",0.5,0.5,0.5,
"Althoughy there have been periodic initiatives to revive they use , but airships see only niche application since that time .","Although there have been periodic initiatives to revive their use , airships have seen only niche application since that time .","Although there have been periodic initiatives to revive their use , airships have seen only niche applications since that time .",0.8,1.0,0.8333333333333334,
Jean-Pierre Blanchard fly the first human-powered dirigible in 1784 and crossed the English Channel at one in 1785 .,Jean-Pierre Blanchard flew the first human-powered dirigible in 1784 and crossed the English Channel in one in 1785 .,Jean-Pierre Blanchard fly the first human-powered dirigible in 1784 and crossed the English Channel in one in 1785 .,1.0,0.5,0.8333333333333334,
"By the begin of WOWII , many towns and cities had built airports , and there is numerous qualifying pilots available .","By the beginning of World War II , many towns and cities had built airports , and there were numerous qualified pilots available .","By the beginning of WOWII , many towns and cities had built airports , and there were numerous qualifying pilots available .",1.0,0.5,0.8333333333333334,
"From the 1960s composite material airframes and quieter , more efficient engines have became available , and Concorde provided supersonic passanger service for more than two decades , but the most important lasting innovations have taken place to instrumentation and control .","Since the 1960s composite material airframes and quieter , more efficient engines have become available , and Concorde provided supersonic passenger service for more than two decades , but the most important lasting innovations have taken place in instrumentation and control .","From the 1960s composite material airframes and quieter , more efficient engines have became available , and Concorde provided supersonicanger service for more than two decades , but the most important lasting innovations have taken place in instrumentation and control .",0.5,0.25,0.4166666666666667,
"Aviation safety mean the state of a aviation system or organization in which risks associated by aviation activities , related to , or in direct support of the operation of aircraft , are reduced and controlled to an acceptable level .","Aviation safety means the state of an aviation system or organization in which risks associated with aviation activities , related to , or in direct support of the operation of aircraft , are reduced and controlled to an acceptable level .","Aviation safety is the state of an aviation system or organization in which risks associated with aviation activities , related to , or in direct support of the operation of aircraft , are reduced and controlled to an acceptable level .",0.6666666666666666,0.6666666666666666,0.6666666666666666,
"In additional , there are environmental impacts specify to aviation .","In addition , there are environmental impacts specific to aviation .","In addition , there are environmental impacts specify to aviation .",1.0,0.5,0.8333333333333334,
"Even white light might be create using individual red , green and blue LEDs , it results in poor color rendering , since only three narrow bands of wavelengths of light are being emitted","Even though white light can be created using individual red , green and blue LEDs , this results in poor color rendering , since only three narrow bands of wavelengths of light are being emitted","Even white light might be created using individual red , green and blue LEDs , it results in poor color rendering , since only three narrow bands of wavelengths of light are being emitted .",0.5,0.25,0.4166666666666667,
The reason be that marriages make particularly men become more future-oriented and take the economic and other responsibility of family .,The reason may be that marriages make particularly men become more future-oriented and take an economic and other responsibility of the family .,The reason is that marriages make particularly men become more future-oriented and take the economic and other responsibility of family .,0.0,0.0,0.0,
"He call them oxidizing rays to emphasize chemical reactivity and distinguishing them from heat rays , discovered the previous year at the other end of the visible spectrum .","He called them oxidizing rays to emphasize chemical reactivity and to distinguish them from heat rays , discovered the previous year at the other end of the visible spectrum .","He calls them oxidizing rays to emphasize chemical reactivity and distinguish them from heat rays , discovered the previous year at the other end of the visible spectrum .",0.0,0.0,0.0,
By 1903 it is known most effective wavelengths were around 250 nm .,By 1903 it was known the most effective wavelengths were around 250 nm .,By 1903 it was known the most effective wavelengths were around 250 nm .,1.0,1.0,1.0,
"Both UVA and UVB destroy vitamin A in skin , can cause further damaging .","Both UVA and UVB destroy vitamin A in skin , which may cause further damage .","Both UVA and UVB destroy vitamin A in the skin , which can cause further damage .",0.6666666666666666,0.6666666666666666,0.6666666666666666,
The amount of UV light produced by Sun means that the Earth would not be able to sustain life on dry land if most of that light not filtered out by the almosphere .,The amount of UV light produced by the Sun means that the Earth would not be able to sustain life on dry land if most of that light were not filtered out by the atmosphere .,The amount of UV light produced by the Sun means that the Earth would not be able to sustain life on dry land if most of that light was not filtered out by the atmosphere .,0.6666666666666666,0.6666666666666666,0.6666666666666666,
"In the electronic level , absorption in the ultraviolet and visible portions of the spectrum depends on the electron orbital are spaced such that they can absorb a quantum of light of a specific frequency , and does not violate selection rules .","At the electronic level , absorption in the ultraviolet and visible portions of the spectrum depends on if the electron orbitals are spaced such that they can absorb a quantum of light of a specific frequency , and does not violate selection rules .","At the electronic level , absorption in the ultraviolet and visible portions of the spectrum depends on the electron orbital are spaced such that they can absorb a quantum of light of a specific frequency , and does not violate selection rules .",1.0,0.3333333333333333,0.7142857142857143,
Computer modeling of light transmission throught translucent ceramic alumina has shown that microscopic pore trapped near grain boundaries act as primary scattering centers .,Computer modeling of light transmission through translucent ceramic alumina has shown that microscopic pores trapped near grain boundaries act as primary scattering centers .,Computer modeling of light transmission through translucent ceramic alumina has shown that microscopic pores trapped near grain boundaries act as primary scattering centers .,1.0,1.0,1.0,
The states in different material vary in the range from energy that they can absorb .,The states in different materials vary in the range of energy that they can absorb .,The states of different materials vary in the range of energy that they can absorb .,0.6666666666666666,1.0,0.7142857142857142,
The attenuation of light of all frequency and wavelengths is due combined mechanisms of absorption and scattering .,The attenuation of light of all frequencies and wavelengths is due to the combined mechanisms of absorption and scattering .,The attenuation of light of all frequency and wavelengths is due to combined mechanisms of absorption and scattering .,1.0,0.3333333333333333,0.7142857142857143,
In the fruit fly insulin both regulate blood sugar as well acting as an growth factor .,In the fruit fly insulin both regulates blood sugar as well as acting as a growth factor .,"In the fruit fly , insulin both regulates blood sugar as well as acting as a growth factor .",0.75,1.0,0.7894736842105263,
"The second phase to synthesizing tryptophan itself from the 5-hydroxytryptophan intermediate would require adding ethanol and water , and letting sit for 30 days this time .","The second phase to synthesizing tryptophan itself from the 5-hydroxytryptophan intermediate would require adding ethanol and water , and letting sit for 30 days this time .","The second phase to synthesizing tryptophan itself from the 5-hydroxytryptophan intermediate would require adding ethanol and water , and letting sit for 30 days this time .",1.0,1.0,1.0,
"The brain uses significantly less energy during sleep than this does when awoke , especially during non-REM sleep .","The brain uses significantly less energy during sleep than it does when awake , especially during non-REM sleep .","The brain uses significantly less energy during sleep than it does when awoke , especially during non-REM sleep .",1.0,0.5,0.8333333333333334,
Conversely he or she can have difficulty waking up in the trough of the cycle .,Conversely they can have difficulty waking up in the trough of the cycle .,Conversely he or she can have difficulty waking up in the trough of the cycle .,1.0,0.0,0.0,
"The human physically organism restores itself during sleep , healing itself and removing metabolic wastes which build during periods of activity","The human organism physically restores itself during sleep , healing itself and removing metabolic wastes which build up during periods of activity","The human physical organism restores itself during sleep , healing itself and removing metabolic wastes which build up during periods of activity",0.5,0.5,0.5,
Many of Shakespeare play were published in editions of varying quality and accuracy in his lifetime .,Many of Shakespeare 's plays were published in editions of varying quality and accuracy in his lifetime .,Many of Shakespeare 's plays were published in editions of varying quality and accuracy in his lifetime .,1.0,1.0,1.0,
"Throughout 20th and 21st century , Shakespeare 's works have been continually adapted and rediscovered with new movements in scholarship and performance .","Throughout the 20th and 21st centuries , Shakespeare 's works have been continually adapted and rediscovered by new movements in scholarship and performance .","Throughout the 20th and 21st century , Shakespeare 's works have been continually adapted and rediscovered with new movements in scholarship and performance .",1.0,0.3333333333333333,0.7142857142857143,
It is not so really clear for which companies Shakespeare wrote this early plays .,It is not clear for which companies Shakespeare wrote his early plays .,It is not really clear for which company Shakespeare wrote these early plays .,0.0,0.0,0.0,
"The Romantic poets attempted revive Shakespearean verse drama , though with a little success .","The Romantic poets attempted to revive Shakespearean verse drama , though with little success .","The Romantic poets attempted to revive Shakespearean verse drama , though with little success .",1.0,1.0,1.0,
"Some commentators have seen this change on mood as evidence of an more serene view of life on Shakespeare 's part , but it may merely reflect the theatrical fashion on the day .","Some commentators have seen this change in mood as evidence of a more serene view of life on Shakespeare 's part , but it may merely reflect the theatrical fashion of the day .","Some commentators have seen this change in mood as evidence of a more serene view of life on Shakespeare 's part , but it may merely reflect the theatrical fashion of the day .",1.0,1.0,1.0,
"In 1593 and 1594 , when the threatres were closed because by plague , Shakespeare published two narrative poems on sexual themes , Venus and Adonis and The Rape of Lucrece .","In 1593 and 1594 , when the theatres were closed because of plague , Shakespeare published two narrative poems on sexual themes , Venus and Adonis and The Rape of Lucrece .","In 1593 and 1594 , when the theatres were closed because of the plague , Shakespeare published two narrative poems on sexual themes , Venus and Adonis and The rape of Lucrece .",0.5,1.0,0.5555555555555556,
This decision are based on the factors analyzed in a planning stage as well as where the product is in the product live cycle .,This decision is based on the factors analyzed in the planning stage as well as where the product is in the product life cycle .,This decision is based on the factors analyzed in the planning stage as well as where the product is in the product life cycle .,1.0,1.0,1.0,
"To stimulate the growth of sale , use for advertising may be high , in other to heightening awareness of the product in question .","To stimulate the growth of sales , use of advertising may be high , in order to heighten awareness of the product in question .","To stimulate the growth of sales , the use of advertising may be high , in other to heightening awareness of the product in question .",0.6666666666666666,0.5,0.625,
"Viral marketing can be greatly facilitated by social medium and if successful , allows key marketing messages and content in reaching large number of target audience within a short time frame .","Viral marketing can be greatly facilitated by social media and if successful , allows key marketing messages and content in reaching a large number of target audiences within a short time frame .","Viral marketing can be greatly facilitated by social medium and if successful , allows key marketing messages and content to reach large number of target audiences within a short time frame .",0.5,0.3333333333333333,0.45454545454545453,
C2C marketing represents a market envirnment where one customer purchase goods from another customer using a third-party business or platform to facilitate the transaction .,C2C marketing represents a market environment where one customer purchases goods from another customer using a third-party business or platform to facilitate the transaction .,C2C marketing represents a market environment where one customer purchases goods from another customer using a third-party business or platform to facilitate the transaction .,1.0,1.0,1.0,
He concluded there are fourteen different types of cubics that cannot be reduced to a equation of a lesser degree .,He concluded that there are fourteen different types of cubics that cannot be reduced to an equation of a lesser degree .,He concluded there are fourteen different types of cubics that cannot be reduced to an equation of a lesser degree .,1.0,0.5,0.8333333333333334,
"I did not observe that he had any great belief of astrological predictions , nor I have seen or heard from any of the great scientists who had such belief .","I did not observe that he had any great belief in astrological predictions , nor have I seen or heard of any of the great scientists who had such belief .","I did not observe that he had any great belief in astrological predictions , nor have I seen or heard from any of the great scientists who had such beliefs .",0.6666666666666666,0.6666666666666666,0.6666666666666666,
The premise of PMI is that the tools and technique of project management are common even among the widespead application of projects from the software industry to the construction industry .,The premise of PMI is that the tools and techniques of project management are common even among the widespread application of projects from the software industry to the construction industry .,The premise of PMI is that the tools and techniques of project management are common even among the widespread application of projects from the software industry to the construction industry .,1.0,1.0,1.0,
Ballet is a collaboration art form .,Ballet is a collaborative art form .,Ballet is a collaboration art form .,1.0,0.0,0.0,
The musical assistant explain developments of musical research and translates artistic ideas into programming languages .,The musical assistant explains developments in musical research and translates artistic ideas into programming languages .,The musical assistant explains developments of musical research and translates artistic ideas into programming languages .,1.0,0.5,0.8333333333333334,
"Examples of products created by mean of commons-based peer production include Linux , an computer operating system","Examples of products created by means of commons-based peer production include Linux , a computer operating system","Examples of products created by means of Commons-based peer production include Linux , a computer operating system",0.6666666666666666,1.0,0.7142857142857142,
"Wikipedia is a example of a collaborative editing project on a large scale , which can be both good and bad , because of the large contributions by the public , Wikipedia has one of the widest ranges of material in the world .","Wikipedia is an example of a collaborative editing project on a large scale , which can be both good and bad . Because of the large contributions by the public , Wikipedia has one of the widest ranges of material in the world .","Wikipedia is an example of a collaborative editing project on a large scale , which can be both good and bad . because of the large contributions by the public , Wikipedia has one of the widest ranges of material in the world .",0.5,0.5,0.5,
"The typing might be organized by divides the writing into sub-tasks assigned to each group member , with the first part of the tasks done before the next parts , or he or she might work together on each tasks .","The typing might be organized by dividing the writing into sub-tasks assigned to each group member , with the first part of the tasks done before the next parts , or they might work together on each task .","The typing might be organized by divides the writing into sub-tasks assigned to each group member , with the first part of the task done before the next parts , or he or they might work together on each task .",0.3333333333333333,0.3333333333333333,0.3333333333333333,
"Such asynchronous contributions are very efficient in the current time , as group members need not to assemble order to work together .","Such asynchronous contributions are very efficient in time , as group members need not assemble in order to work together .","Such asynchronous contributions are very efficient at the current time , as group members need not need to assemble in order to work together .",0.3333333333333333,0.3333333333333333,0.3333333333333333,
That is increasing amount of research literature investigating how a collaborative writing can improve learning experiences .,There is increasing amount of research literature investigating how collaborative writing can improve learning experiences .,There is an increasing amount of research literature investigating how collaborative writing can improve learning experiences .,0.6666666666666666,1.0,0.7142857142857142,
"At first , the designers of word processing systems combines existing technologies with emerging ones to develop stand-alone equipment , created a new business distinct to the emerging world of the personally computer .","At first , the designers of word processing systems combined existing technologies with emerging ones to develop stand-alone equipment , creating a new business distinct from the emerging world of the personal computer .","At first , the designers of word processing systems combine existing technologies with emerging ones to develop stand-alone equipment , creating a new business distinct to the emerging world of the personally computer .",0.5,0.25,0.4166666666666667,
Word processors do not develop out computer technolology .,Word processors did not develop out of computer technology .,Word processors do not develop out of computer technology .,1.0,0.6666666666666666,0.9090909090909091,
"Word processing systems would create a lot much more complex and capable text were developed and prices began to fall , making them more accessible to the public .","Word processing systems that would create much more complex and capable text were developed and prices began to fall , making them more accessible to the public .","Word processing systems that would create a lot much more complex and capable text were developed and prices began to fall , making them more accessible to the public .",1.0,0.5,0.8333333333333334,
"A demand for new and interesting fonts , which can be found the free of copyright restrictions , or commissioned from font designers , occurred .","A demand for new and interesting fonts , which can be found free of copyright restrictions , or commissioned from font designers , occurred .","A demand for new and interesting fonts , which can be found free of copyright restrictions , or commissioned from font designers , occurred .",1.0,1.0,1.0,
"Five of these amphora were designated as originating from the king personal estate , with the sixth from the estate of the royal house of Aten .","Five of these amphoras were designated as originating from the king 's personal estate , with the sixth from the estate of the royal house of Aten .","Five of these amphora were designated as originating from the king 's personal estate , with the sixth from the estate of the royal house of Aten .",1.0,0.5,0.8333333333333334,
Both of it regions eventually evolved into American wine 's oldest and largest wine producrs respectively .,Both of these regions eventually evolved into American wine 's oldest and largest wine producers respectively .,Both of these regions eventually evolved into American wine 's oldest and largest wine products respectively .,0.5,0.5,0.5,
"Wine must also be made from other species of grape or from hybrids , created by the genetical crossing of two species .","Wine can also be made from other species of grape or from hybrids , created by the genetic crossing of two species .","Wine must also be made from other species of grape or from hybrids , created by the genetical crossing of two species .",1.0,0.0,0.0,
Some blended wine names are marketing terms whose use is governed by trademark law rather than by specific wine laws .,Some blended wine names are marketing terms whose use is governed by trademark law rather than by specific wine laws .,Some blended wine names are marketing terms whose use is governed by trademark law rather than by specific wine laws .,1.0,1.0,1.0,
"Western cultures are associated width auditory experiences concerning religious content , frequently related for sin .","Western cultures are associated with auditory experiences concerning religious content , frequently related to sin .","Western cultures are associated with auditory experiences concerning religious content , frequently related to sin .",1.0,1.0,1.0,
An delusion is commonly defined as an unrelenting sense of certainty maintained despite of strong contradictroy evidence .,A delusion is commonly defined as an unrelenting sense of certainty maintained despite strong contradictory evidence .,A delusion is commonly defined as an unrelenting sense of certainty maintained despite of strong contradictory evidence .,1.0,0.6666666666666666,0.9090909090909091,
A other type of catatonia is more of an outward presentation of the profoundly agitated state described from above .,The other type of catatonia is more of an outward presentation of the profoundly agitated state described above .,Another type of catatonia is more of an outward presentation of the profoundly agitated state described above .,0.5,0.5,0.5,
"It involves excessive and purposeless motor behaviour , as well as extreme mental preoccupation that prevents an intact experiences of reality .","It involves excessive and purposeless motor behaviour , as well as extreme mental preoccupation that prevents an intact experience of reality .","It involves excessive and purposeless motor behaviour , as well as extreme mental preoccupation that prevents an intact experience of reality .",1.0,1.0,1.0,
"Alogia are characterized by a lack of speech , often causing by an disruption of the throught process .","Alogia is characterized by a lack of speech , often caused by a disruption in the thought process .","Alogia is characterized by a lack of speech , often caused by a disruption of the through process .",0.75,0.6,0.7142857142857143,
"Apart with the lacks of content in a reply , the manner in which the person delivered the reply is affected as well .","Apart from the lack of content in a reply , the manner in which the person delivers the reply is affected as well .","Apart from the lack of content in a reply , the manner in which the person delivered the reply is affected as well .",1.0,0.6666666666666666,0.9090909090909091,
Studies have showed a correlation between alogic ratings in individuals and amount and duration of pauses in they speech when responding to a series of questions posed from the researcher .,Studies have shown a correlation between alogic ratings in individuals and the amount and duration of pauses in their speech when responding to a series of questions posed by the researcher .,Studies have showed a correlation betweenogic ratings in individuals and the amount and duration of pauses in their speech when responding to a series of questions posed by the researcher .,0.75,0.75,0.75,
"Spech vague , conveys little information , but is not grossly incoherent and the amount of speech is not reduced .","Speech is vague , conveys little information , but is not grossly incoherent and the amount of speech is not reduced .","Spech vague , conveys little information , but is not grossly incoherent and the amount of speech is not reduced .",1.0,0.0,0.0,
"They was found self-esteem is related to the connectivity of frontostriatal circuits , suggesting that feelings of self-worth may emerge from neural systems which integrate information about the self with positive affect and reward .","It was found that self-esteem is related to the connectivity of frontostriatal circuits , suggesting that feelings of self-worth may emerge from neural systems which integrate information about the self with positive affect and reward .","They found that self-esteem is related to the connectivity of frontostriatal circuits , suggesting that feelings of self-worth may emerge from neural systems which integrate information about the self with positive affect and reward .",0.5,0.5,0.5,
"This circuit is important executive functions including complex problem solving , learning new information , planning ahead , recalling remote memories , responding with appropriate behavior , and chronological ordering of event .","This circuit is important in executive functions including complex problem solving , learning new information , planning ahead , recalling remote memories , responding with appropriate behavior , and chronological ordering of events .","This circuit is important executive functions including complex problem solving , learning new information , planning ahead , recalling remote memories , responding with appropriate behavior , and chronological ordering of events .",1.0,0.5,0.8333333333333334,
These five circuits share the same anatomical structures .,These five circuits share same anatomical structures .,These five circuits share the same anatomical structures .,1.0,0.0,0.0,
"Also , there 're open connections to these circuits integrating informatin from other areas of the brain .","Also , there are open connections to these circuits integrating information from other areas of the brain .","Also , there are open connections to these circuits integrating informationati from other areas of the brain .",0.5,0.5,0.5,
Respect from others was believed to be more fragile and lost easily than inner self-esteem .,Respect from others was believed to be more fragile and easily lost than inner self-esteem .,Respect from others was believed to be more fragile and lost easily than inner self-esteem .,1.0,0.0,0.0,
Modern theories of self-esteem explore the reasons humans were motivated to maintain a high regard for they .,Modern theories of self-esteem explore the reasons humans are motivated to maintain a high regard for themselves .,Modern theories of self-esteem explore the reasons humans are motivated to maintain a high regard for themselves .,1.0,1.0,1.0,
"According with Terror Management Theory , self-esteem serves a protective function and reduce anxiety about life and death .","According to Terror Management Theory , self-esteem serves a protective function and reduces anxiety about life and death .","According to Terror Management Theory , self-esteem serves a protective function and reduces anxiety about life and death .",1.0,1.0,1.0,
"Thus , it affects the way we are and acts in world and the way we are related to everybody else .","Thus , it affects the way we are and acts in the world and the way we are related to everybody else .","Thus , it affects the way we are and act in the world and the way we are related to everybody else .",0.5,1.0,0.5555555555555556,
Experiences in a person life are a major source of how would that be the self-esteem develops .,Experiences in a person 's life are a major source of how self-esteem develops .,Experiences in a person 's life are a major source of how self-esteem develops .,1.0,1.0,1.0,
"In the early years of a child 's lives , parents have a significant influence on self-esteem and can be considered the main source from positive and negative experiences a children will have .","In the early years of a child 's life , parents have a significant influence on self-esteem and can be considered the main source of positive and negative experiences a child will have .","In the early years of a child 's life , parents have a significant influence on self-esteem and can be considered the main source of positive and negative experiences a child will have .",1.0,1.0,1.0,
A decrease is being seen from middle age to old age with varying findings on they is a small or large decrease .,A decrease is seen from middle age to old age with varying findings on if it is a small or large decrease .,A decrease is being seen from middle age to old age with varying findings it is a small or large decrease .,0.5,0.3333333333333333,0.45454545454545453,
Multiple cohort studies show there is not an difference in the life-span trajectory of self-esteem between generations due to societal changes such grade inflation in education or the presence of social media .,Multiple cohort studies show that there is not a difference in the life-span trajectory of self-esteem between generations due to societal changes such as grade inflation in education or the presence of social media .,Multiple cohort studies show there is not a difference in the life-span trajectory of self-esteem between generations due to societal changes such as grade inflation in education or the presence of social media .,1.0,0.6666666666666666,0.9090909090909091,
Families with higher and expendable income can acumulate wealth and focus in meeting immediate needs while being able to consume and enjoy luxuries and weather crises .,Families with higher and expendable income can accumulate wealth and focus on meeting immediate needs while being able to consume and enjoy luxuries and weather crises .,Families with higher and expendable income can accumulate wealth and focus on meeting immediate needs while being able to consume and enjoy luxuries and weather crises .,1.0,1.0,1.0,
These types of discrimination feed into the some other reasons why African Americans ends up have different starting points and therefore fewer assets .,These types of discrimination feed into the other reasons why African Americans end up having different starting points and therefore fewer assets .,These types of discrimination feed into some other reasons why African Americans end up having different starting points and therefore fewer assets .,0.6666666666666666,0.6666666666666666,0.6666666666666666,
Parents with an low socioeconomic status cannot afford to many of the health care resources which be the reason that their children may have a more advanced illness because of the lack of treatment .,Parents with a low socioeconomic status cannot afford many of the health care resources which is the reason that their children may have a more advanced illness because of the lack of treatment .,Parents with a low socioeconomic status cannot afford many of the health care resources which may be the reason that their children may have more advanced illnesses because of the lack of treatment .,0.5,0.6666666666666666,0.5263157894736842,
"This would lead to greater feelings of independent , making individuals of high SES less inclined to gain rapport with conversational partners because they are less likely to need their assistance in future .","This may lead to greater feelings of independence , making individuals of high SES less inclined to gain rapport with conversational partners because they are less likely to need their assistance in the future .","This would lead to greater feelings of independence , making individuals of high SES less inclined to gain rapport with conversational partners because they are less likely to need their assistance in future .",1.0,0.3333333333333333,0.7142857142857143,
"On contrast , increasing rates of obesity in a societal level are felt to be due to an easily accessible and palatable diet , increased reliance of cars , and mechanized manufacturing .","In contrast , increasing rates of obesity at a societal level are felt to be due to an easily accessible and palatable diet , increased reliance on cars , and mechanized manufacturing .","In contrast , increasing rates of obesity at a societal level are felt to be due to an easily accessible and palatable diet , increased reliance on cars , and mechanized manufacturing .",1.0,1.0,1.0,
"During the same period , an increase occurred on the average amount of food energy consume .","During the same period , an increase occurred in the average amount of food energy consumed .","During the same period , an increase occurred in the average amount of food energy consumed .",1.0,1.0,1.0,
"It is thought that in the developed countries , the wealthy are able to afford more nutritious food , they are under greater social pressure to remain slim , and have more opportunities along with greater expectations for physical fitness .","It is thought that in developed countries , the wealthy are able to afford more nutritious food . They are under greater social pressure to remain slim , and have more opportunities along with greater expectations for physical fitness .","It is thought that in the developed countries , the wealthy are able to afford more nutritious food , they are under greater social pressure to remain slim , and have more opportunities along with greater expectations for physical fitness .",1.0,0.0,0.0,
Even shorts sleep does increase weight gain it is unclear this is to a meaningful degrees or increasing sleep would been of benefit .,Even if shorts sleep does increase weight gain it is unclear if this is to a meaningful degree or increasing sleep would be of benefit .,Even short sleep does increase weight gain . It is unclear if this is to a meaningful degree or if increasing sleep would been of benefit .,0.4,0.5,0.4166666666666667,
Certain aspects of personality are associated to being obese .,Certain aspects of personality are associated with being obese .,Certain aspects of personality are associated to being obese .,1.0,0.0,0.0,
Yet academia study of loneliness was sparse until late twentieth centary .,Yet academic study of loneliness was sparse until the late twentieth century .,Yet academia study of loneliness was sparse until the late twentieth century .,1.0,0.6666666666666666,0.9090909090909091,
"Chronic loneliness on the other hands is widely considered to be harmful , with numerous reviews and meta-studies concluding they is a significant risk factor for poor mental and physical health outcomes .","Chronic loneliness on the other hand is widely considered harmful , with numerous reviews and meta-studies concluding it is a significant risk factor for poor mental and physical health outcomes .","Chronic loneliness on the other hand is widely considered to be harmful , with numerous reviews and meta-studies concluding it is a significant risk factor for poor mental and physical health outcomes .",1.0,0.6666666666666666,0.9090909090909091,
The loneliness that triggers suicidal tendencies impact all facet of society .,The loneliness that triggers suicidal tendencies impacts all facets of society .,The loneliness that triggers suicidal tendencies impacts all facets of society .,1.0,1.0,1.0,
"Nostalgia has also been found to have a restoative effect , counteracting loneliness by increasing perceived social support .","Nostalgia has also been found to have a restorative effect , counteracting loneliness by increasing perceived social support .","Nostalgia has also been found to have a restorative effect , counteracting loneliness by increasing perceived social support .",1.0,1.0,1.0,
"Although nostalgia is often triggered by negative feelings , but its results in increasing one 's mood and heightening positive emotions , which can stem from feelings of warmth or coping resulting from nostalgic reflections .","Although nostalgia is often triggered by negative feelings , it results in increasing one 's mood and heightening positive emotions , which can stem from feelings of warmth or coping resulting from nostalgic reflections .","Although nostalgia is often triggered by negative feelings , it results in increasing one 's mood and heightening positive emotions , which can stem from feelings of warmth or coping resulting from nostalgic reflections .",1.0,1.0,1.0,
"Additionally , in a second study conducted , some participant were exposed to nostalgic engagement and reflection while a other group was not .","Additionally , in a second study conducted , some participants were exposed to nostalgic engagement and reflection while the other group was not .","Additionally , in a second study conducted , some participants were exposed to nostalgic engagement and reflection while the other group were not .",0.6666666666666666,1.0,0.7142857142857142,
"Thirdly , the researchers find that threatened meaning can even act as a triger for nostalgia , thus increasing one 's nostalgic reflections .","Thirdly , the researchers found that threatened meaning can even act as a trigger for nostalgia , thus increasing one 's nostalgic reflections .","Thirdly , the researchers find that threatened meaning can even act as a trigger for nostalgia , thus increasing one 's nostalgic reflections .",1.0,0.5,0.8333333333333334,
"In a 2014 study conduct by Routledge , he and a team observed that the more people reported have major disruptions and uncertainties in they lives , the more their nostalgically longed for the past .","In a 2014 study conducted by Routledge , he and a team observed that the more people reported having major disruptions and uncertainties in their lives , the more they nostalgically longed for the past .","In a 2014 study conducted by Routledge , he and a team observed that the more people reported having major disruptions and uncertainties in their lives , the more their nostalgically long for the past .",0.75,0.75,0.75,
"Aesthetics , a non very tidy intellectual discipline , is a heterogeneous collection of problems that concern an arts primarily but also relate about nature .","Aesthetics , a not very tidy intellectual discipline , is a heterogeneous collection of problems that concern the arts primarily but also relate to nature .","Aesthetics , a non very tidy intellectual discipline , is a heterogeneous collection of problems that concern the arts primarily but also relate to nature .",1.0,0.6666666666666666,0.9090909090909091,
It 's what a thing means or symbolizes to us that is often what we are judging .,It is what a thing means or symbolizes for us that is often what we are judging .,It 's what a thing means or symbolizes to us that is often what we are judging .,1.0,0.0,0.0,
"For instant , the source of a painting 's beauty has a different characters to that of beautiful music , suggesting his or her aesthetics differ in kind .","For instance , the source of a painting 's beauty has a different character to that of beautiful music , suggesting their aesthetics differ in kind .","For instance , the source of a painting 's beauty has a different character to that of beautiful music , suggesting his or her aesthetics differ in kind .",1.0,0.6666666666666666,0.9090909090909091,
"Another very concrete example describes a aesthetical pleasing human face whose proportions can be described by very few bits of information , drawing inspiration from less detailed 15th century proportion studies by Leonardo da Vinci and Albrecht Dürer .","Another very concrete example describes an aesthetically pleasing human face whose proportions can be described by very few bits of information , drawing inspiration from less detailed 15th century proportion studies by Leonardo da Vinci and Albrecht Dürer .","Another very concrete example describes an aesthetical pleasing human face whose proportions can be described by very few bits of information , drawing inspiration from less detailed 15th century proportion studies by Leonardo da Vinci and Albrecht Dürer .",1.0,0.5,0.8333333333333334,
Each presents perspectives that widely shared by published scholars .,Each presents perspectives that are widely shared by published scholars .,Each presents perspectives that are widely shared by published scholars .,1.0,1.0,1.0,
Much modern theorists have stated that this ideal cannot be achieved without analysing additional factors .,Many modern theorists have stated that this ideal cannot be achieved without analysing additional factors .,Much modern theorists have stated that this ideal cannot be achieved without analysing additional factors .,1.0,0.0,0.0,
"Amongst the assortment of perspectives commonly regard as coherence theory , theorists differ on question of whether coherence entails many possible ture systems of thought or only a single absolute system .","Among the assortment of perspectives commonly regarded as coherence theory , theorists differ on the question of whether coherence entails many possible true systems of thought or only a single absolute system .","Amongst the assortment of perspectives commonly regarded as coherence theory , theorists differ on the question of whether coherence entails many possibleure systems of thought or only a single absolute system .",0.6666666666666666,0.5,0.625,
"Consensus theory held that truth is whatever is agreed upon , or in some versions , might come to be agreed upon , by some specified group .","Consensus theory holds that truth is whatever is agreed upon , or in some versions , might come to be agreed upon , by some specified group .","The consensus theory held that truth is whatever is agreed upon , or in some versions , might come to be agreed upon , by some specified group .",0.0,0.0,0.0,
It sometimes hard to find out one has this disease .,It is sometimes hard to find out if one has this disease .,It is sometimes hard to find out if one has this disease .,1.0,1.0,1.0,
In 1840 a Royal Commission published its findings on the state in conditions for the workers of the mining industry that documented appallingly the dangerous environment that they had to work in and the high frequency of accidents .,In 1840 a Royal Commission published its findings on the state of conditions for the workers of the mining industry that documented the appallingly dangerous environment that they had to work in and the high frequency of accidents .,In 1840 a Royal Commission published its findings on the state of conditions for the workers of the mining industry that documented appallingly the dangerous environment that they had to work in and the high frequency of accidents .,1.0,0.5,0.8333333333333334,
"As labor movements arose in response to workers concerns in the wake of the industrial revolution , worker 's health entered consideration as a labor-related issue .","As labor movements arose in response to worker concerns in the wake of the industrial revolution , worker 's health entered consideration as a labor-related issue .","As labor movements arose in response to workers ' concerns in the wake of the industrial revolution , worker 's health entered consideration as a labor-related issue .",0.0,0.0,0.0,


"Gene ID","source_id","Organism","Genomic Location (Gene)","Product Description","Input Ortholog(s)","Paralog count","Ortholog count","Gene has Unmatched Transcripts","Gene Name or Symbol","gene_source_id","Previous ID(s)","Transcript Product Description","Chromosome","Genomic Location (Transcript)","Genomic Sequence ID","Ortholog Group","Protein Length","CDS Length","Molecular Weight","Isoelectric Point","Interpro ID","Interpro Description","PFam ID","PFam Description","PirSF ID","PirSF Description","Prositefamilies ID","Prositefamilies Description","Smart ID","Smart Description","Superfamily ID","Superfamily Description","TigrFam ID","TigrFam Description","GeneDB Updated Product Name"
"AK88_01372","AK88_01372-t30_1","Plasmodium fragile strain nilgiri","KQ001656:20,247..21,962(-)","hypothetical protein","C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","AK88_01372","null","hypothetical protein","Not Assigned","KQ001656:20247..21962(-)","KQ001656","OG6r1_100885","492","1479","57388","4.07","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"C922_03194","C922_03194-t30_1","Plasmodium inui San Antonio 1","KI965472:10,499..12,021(-)","hypothetical protein","AK88_01372,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","C922_03194","null","hypothetical protein","Not Assigned","KI965472:10499..12021(-)","KI965472","OG6r1_100885","418","1257","48456","4.29","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PBANKA_0100500","PBANKA_0100500.1","Plasmodium berghei ANKA","PbANKA_01_v3:40,052..41,483(-)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PBANKA_0100500","Previous IDs: PB106914.00.0;PB402406.00.0;PBANKA_010050","PIR protein","01","PbANKA_01_v3:40052..41483(-)","PbANKA_01_v3","OG6r1_100885","351","1056","41190","4.56","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PCHAS_0101200","PCHAS_0101200.1","Plasmodium chabaudi chabaudi","PCHAS_01_v3:50,365..51,801(-)","PIR protein","AK88_01372,C922_03194,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PCHAS_0101200","Previous IDs: PC400319.00.0;PC400436.00.0;PCAS_010120;PCHAS_010120","PIR protein","01","PCHAS_01_v3:50365..51801(-)","PCHAS_01_v3","OG6r1_100885","351","1056","41436","4.46","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PCOAH_00037060","PCOAH_00037060-t30_1","Plasmodium coatneyi Hackeri","CP016249:2,514,805..2,517,179(+)","Uncharacterized protein","AK88_01372,C922_03194,PCHAS_0101200,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PCOAH_00037060","null","Uncharacterized protein","11","CP016249:2514805..2517179(+)","CP016249","OG6r1_100885","609","1830","70782","3.69","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","SSF48371","ARM repeat","N/A","N/A","null"
"PCYB_115510","PCYB_115510-t26_1","Plasmodium cynomolgi strain B","DF157103:2,066,721..2,068,360(+)","VIR-like CYIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PCYB_115510","null","VIR-like CYIR protein","11","DF157103:2066721..2068360(+)","DF157103","OG6r1_100885","398","1197","46207","4.17","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PKNH_1149300","PKNH_1149300.1","Plasmodium knowlesi strain H","PKNH_11_v2:2,310,993..2,313,115(+)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PKNH_1149300","Previous IDs: PK14_3515w;PKH_114850","PIR protein","11","PKNH_11_v2:2310993..2313115(+)","PKNH_11_v2","OG6r1_100885","532","1599","62431","3.87","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PKNOH_S130216000","PKNOH_S130216000-t35_1","Plasmodium knowlesi strain Malayan Strain Pk1 A","NETL01000027:2,343,552..2,345,674(+)","KIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PKNOH_S130216000","null","KIR protein","Not Assigned","NETL01000027:2343552..2345674(+)","NETL01000027","OG6r1_100885","532","1599","62431","3.87","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PVL_110036700","PVL_110036700-t42_1","Plasmodium vivax-like Pvl01","PVL_11_v1:1,619,441..1,620,831(+)","VIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PVL_110036700","null","VIR protein","11","PVL_11_v1:1619441..1620831(+)","PVL_11_v1","OG6r1_100885","274","825","31528","4.34","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PVP01_1147700","PVP01_1147700.1","Plasmodium vivax P01","PvP01_11_v1:2,044,529..2,046,148(+)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PVP01_1147700","null","PIR protein","11","PvP01_11_v1:2044529..2046148(+)","PvP01_11_v1","OG6r1_100885","392","1179","45508","4.29","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PVX_113230","PVX_113230.1","Plasmodium vivax Sal-1","Pv_Sal1_chr11:2,005,940..2,007,559(+)","variable surface protein Vir14-related","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PVX_113230","Previous IDs: Pv113230","variable surface protein Vir14-related","11","Pv_Sal1_chr11:2005940..2007559(+)","Pv_Sal1_chr11","OG6r1_100885","392","1179","45508","4.29","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PY06119","PY06119-t26_1","Plasmodium yoelii yoelii 17XNL","AABL01002035:2,759..4,186(+)","hypothetical protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PY06119","Previous IDs: 2042.m00048","hypothetical protein","Not Assigned","AABL01002035:2759..4186(+)","AABL01002035","OG6r1_100885","316","951","37098","4.61","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PY17X_0102100","PY17X_0102100.1","Plasmodium yoelii yoelii 17X","Py17X_01_v3:170,042..171,469(-)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PY17X_0102100","null","PIR protein","1","Py17X_01_v3:170042..171469(-)","Py17X_01_v3","OG6r1_100885","351","1056","41123","4.57","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PYYM_0101500","PYYM_0101500.1","Plasmodium yoelii yoelii YM","PyYM_01_v1:58,496..59,923(-)","YIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PYYM_0101500","null","YIR protein","01","PyYM_01_v1:58496..59923(-)","PyYM_01_v1","OG6r1_100885","351","1056","41123","4.57","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PcyM_1151000","PcyM_1151000-t36_1","Plasmodium cynomolgi strain M","PcyM_11:2,083,120..2,084,759(+)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PcyM_1151000","null","PIR protein","11","PcyM_11:2083120..2084759(+)","PcyM_11","OG6r1_100885","398","1197","46207","4.17","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PmUG01_11061500","PmUG01_11061500.1","Plasmodium malariae UG01","PmUG01_11_v1:2,589,145..2,590,611(+)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PmUG01_11061500","null","PIR protein","11","PmUG01_11_v1:2589145..2590611(+)","PmUG01_11_v1","OG6r1_100885","346","1041","41023","4.71","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PocGH01_00042800","PocGH01_00042800.1","Plasmodium ovale curtisi GH01","PocGH01_00_v1_contig_48:13,738..15,039(-)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,YYE_04766,YYG_04764","0","18","no","null","PocGH01_00042800","null","PIR protein","Not Assigned","PocGH01_00_v1_contig_48:13738..15039(-)","PocGH01_00_v1_contig_48","OG6r1_100885","381","1146","44445","4.91","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"YYE_04766","YYE_04766-t30_1","Plasmodium vinckei vinckei strain vinckei","KL446957:28,801..30,236(-)","hypothetical protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYG_04764","0","18","no","null","YYE_04766","null","hypothetical protein","Not Assigned","KL446957:28801..30236(-)","KL446957","OG6r1_100885","351","1056","41305","4.34","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"YYG_04764","YYG_04764-t30_1","Plasmodium vinckei petteri strain CR","KI965407:494,449..495,865(+)","hypothetical protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766","0","18","no","null","YYG_04764","null","hypothetical protein","Not Assigned","KI965407:494449..495865(+)","KI965407","OG6r1_100885","351","1056","41305","4.4","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"


,Accession Number,Average Operon Size,File Name,Max Operon Size,Min Operon Size,Number of Operons,Organism,Species
0,GCF_000495455.2,5188.333333333333,GCF_000495455.2_ASM49545v2_genomic.gbff.gz,5193,5173,6,Pseudomonas putida S12,Pseudomonas putida
1,GCF_003851165.1,5210.2,GCF_003851165.1_ASM385116v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
2,GCF_002021815.1,5098.4,GCF_002021815.1_ASM202181v1_genomic.gbff.gz,5192,4958,5,Pseudomonas parafulva,Pseudomonas parafulva
3,GCF_000344355.2,5282.6,GCF_000344355.2_ASM34435v2_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae pv. actinidiae ICMP 18708,Pseudomonas syringae
4,GCF_900235865.1,5287.2,GCF_900235865.1_CFBP2118_genomic.gbff.gz,5463,5239,5,Pseudomonas syringae pv. syringae,Pseudomonas syringae
5,GCF_003290365.1,5202.666666666667,GCF_003290365.1_ASM329036v1_genomic.gbff.gz,5347,5131,6,Pseudomonas putida,Pseudomonas putida
6,GCF_001516205.2,5157.25,GCF_001516205.2_ASM151620v2_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
7,GCF_003850345.1,5210.2,GCF_003850345.1_ASM385034v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
8,GCF_003612935.1,5273.8,GCF_003612935.1_ASM361293v1_genomic.gbff.gz,5453,5229,5,Pseudomonas fluorescens,Pseudomonas fluorescens
9,GCF_003850365.1,5210.2,GCF_003850365.1_ASM385036v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
10,GCF_003047145.2,5187.0,GCF_003047145.2_ASM304714v2_genomic.gbff.gz,5204,5181,4,Pseudomonas stutzeri,Pseudomonas stutzeri
11,GCF_000267545.1,5205.25,GCF_000267545.1_ASM26754v1_genomic.gbff.gz,5206,5205,4,Pseudomonas stutzeri CCUG 29243,Pseudomonas stutzeri
12,GCF_002192475.1,5156.75,GCF_002192475.1_ASM219247v1_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
13,GCF_900149285.1,5156.75,GCF_900149285.1_PcyII-10_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
14,GCF_003851365.1,5261.4,GCF_003851365.1_ASM385136v1_genomic.gbff.gz,5617,5165,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis
15,GCF_001045685.1,5157.0,GCF_001045685.1_ASM104568v1_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa DSM 50071 = NBRC 12689,Pseudomonas aeruginosa
16,GCF_000007565.2,5105.4,GCF_000007565.2_ASM756v2_genomic.gbff.gz,5245,4955,5,Pseudomonas putida KT2440,Pseudomonas putida
17,GCF_001792855.1,5157.5,GCF_001792855.1_ASM179285v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
18,GCF_003798125.1,5157.25,GCF_003798125.1_ASM379812v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
19,GCF_001023535.1,5240.4,GCF_001023535.1_ASM102353v1_genomic.gbff.gz,5417,5178,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
20,GCF_000262325.2,5254.166666666667,GCF_000262325.2_ASM26232v2_genomic.gbff.gz,5437,5212,6,Pseudomonas fluorescens A506,Pseudomonas fluorescens
21,GCF_003008495.1,5180.0,GCF_003008495.1_ASM300849v1_genomic.gbff.gz,5180,5180,4,Pseudomonas stutzeri,Pseudomonas stutzeri
22,GCF_000183645.1,5119.0,GCF_000183645.1_ASM18364v1_genomic.gbff.gz,5260,4968,5,Pseudomonas putida BIRD-1,Pseudomonas putida
23,GCF_000733715.2,5196.0,GCF_000733715.2_ASM73371v2_genomic.gbff.gz,5196,5196,4,Pseudomonas mendocina S5.2,Pseudomonas mendocina
24,GCF_001721825.1,5157.25,GCF_001721825.1_ASM172182v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
25,GCF_001542835.1,5157.25,GCF_001542835.1_ASM154283v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
26,GCF_001618925.1,5157.5,GCF_001618925.1_ASM161892v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
27,GCF_000016565.1,5216.75,GCF_000016565.1_ASM1656v1_genomic.gbff.gz,5217,5216,4,Pseudomonas mendocina ymp,Pseudomonas mendocina
28,GCF_003850485.1,5213.2,GCF_003850485.1_ASM385048v1_genomic.gbff.gz,5391,5166,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
29,GCF_002844145.1,5213.8,GCF_002844145.1_ASM284414v1_genomic.gbff.gz,5401,5133,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
30,GCF_001708465.1,5215.0,GCF_001708465.1_ASM170846v1_genomic.gbff.gz,5215,5215,1,Pseudomonas fluorescens,Pseudomonas fluorescens
31,GCF_001516245.2,5156.25,GCF_001516245.2_ASM151624v2_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
32,GCF_001721765.1,5157.25,GCF_001721765.1_ASM172176v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
33,GCF_900235835.1,5286.6,GCF_900235835.1_CFBP3846_genomic.gbff.gz,5465,5242,5,Pseudomonas syringae pv. avii,Pseudomonas syringae
34,GCF_000271965.2,5185.333333333333,GCF_000271965.2_ASM27196v2_genomic.gbff.gz,5194,5181,6,Pseudomonas putida SJTE-1,Pseudomonas putida
35,GCF_900095805.1,5157.5,GCF_900095805.1_PA14Or_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
36,GCF_002006545.1,5241.8,GCF_002006545.1_ASM200654v1_genomic.gbff.gz,5418,5197,5,Pseudomonas protegens,Pseudomonas protegens
37,GCF_002104595.1,5156.5,GCF_002104595.1_ASM210459v1_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
38,GCF_001722045.1,5157.0,GCF_001722045.1_ASM172204v1_genomic.gbff.gz,5158,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
39,GCF_001281365.1,5278.8,GCF_001281365.1_ASM128136v1_genomic.gbff.gz,5457,5234,5,Pseudomonas syringae UMAF0158,Pseudomonas syringae
40,GCF_002025705.1,5066.2,GCF_002025705.1_ASM202570v1_genomic.gbff.gz,5211,4973,5,Pseudomonas putida,Pseudomonas putida
41,GCF_003851205.1,5210.2,GCF_003851205.1_ASM385120v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
42,GCF_002442555.1,5209.25,GCF_002442555.1_ASM244255v1_genomic.gbff.gz,5217,5188,4,Pseudomonas mendocina,Pseudomonas mendocina
43,GCF_003852025.1,5285.166666666667,GCF_003852025.1_ASM385202v1_genomic.gbff.gz,5519,5215,6,Pseudomonas synxantha,Pseudomonas synxantha
44,GCF_001518975.1,5157.0,GCF_001518975.1_ASM151897v1_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
45,GCF_001632245.1,5156.25,GCF_001632245.1_ASM163224v1_genomic.gbff.gz,5157,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
46,GCF_000498395.2,5109.6,GCF_000498395.2_ASM49839v3_genomic.gbff.gz,5185,4996,5,Pseudomonas putida S13.1.2,Pseudomonas putida
47,GCF_003940785.1,5189.857142857143,GCF_003940785.1_ASM394078v1_genomic.gbff.gz,5409,4990,7,Pseudomonas entomophila,Pseudomonas entomophila
48,GCF_900475215.1,5238.166666666667,GCF_900475215.1_42727_B01_genomic.gbff.gz,5456,5049,6,Pseudomonas fluorescens,Pseudomonas fluorescens
49,GCF_900636845.1,5182.0,GCF_900636845.1_44858_G01_genomic.gbff.gz,5182,5182,4,Pseudomonas stutzeri,Pseudomonas stutzeri
50,GCF_003851265.1,5212.2,GCF_003851265.1_ASM385126v1_genomic.gbff.gz,5398,5163,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
51,GCF_000012265.1,5249.8,GCF_000012265.1_ASM1226v1_genomic.gbff.gz,5433,5204,5,Pseudomonas protegens Pf-5,Pseudomonas protegens
52,GCF_001548135.1,5157.25,GCF_001548135.1_ASM154813v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
53,GCF_900636645.1,5118.4,GCF_900636645.1_43295_H02_genomic.gbff.gz,5258,4968,5,Pseudomonas putida,Pseudomonas putida
54,GCF_003851645.1,5264.666666666667,GCF_003851645.1_ASM385164v1_genomic.gbff.gz,5440,5202,6,Pseudomonas orientalis,Pseudomonas orientalis
55,GCF_003228315.1,5233.0,GCF_003228315.1_ASM322831v1_genomic.gbff.gz,5418,5196,6,Pseudomonas putida,Pseudomonas putida
56,GCF_002442855.1,5156.0,GCF_002442855.1_ASM244285v1_genomic.gbff.gz,5156,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
57,GCF_004006335.1,5249.0,GCF_004006335.1_ASM400633v1_genomic.gbff.gz,5443,5207,6,Pseudomonas syringae,Pseudomonas syringae
58,GCF_003025345.2,5154.75,GCF_003025345.2_ASM302534v2_genomic.gbff.gz,5155,5154,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
59,GCF_900289125.1,5285.2,GCF_900289125.1_CFBP2116_finsihed_replicons_genomic.gbff.gz,5459,5238,5,Pseudomonas syringae,Pseudomonas syringae
60,GCF_003940825.1,5194.0,GCF_003940825.1_ASM394082v1_genomic.gbff.gz,5412,4994,7,Pseudomonas entomophila,Pseudomonas entomophila
61,GCF_000204295.1,5197.0,GCF_000204295.1_ASM20429v1_genomic.gbff.gz,5197,5197,4,Pseudomonas mendocina NK-01,Pseudomonas mendocina
62,GCF_002905815.2,5242.2,GCF_002905815.2_ASM290581v2_genomic.gbff.gz,5255,5239,5,Pseudomonas syringae pv. syringae,Pseudomonas syringae
63,GCF_003851495.1,5263.833333333333,GCF_003851495.1_ASM385149v1_genomic.gbff.gz,5441,5186,6,Pseudomonas synxantha,Pseudomonas synxantha
64,GCF_003851805.1,5210.2,GCF_003851805.1_ASM385180v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
65,GCF_003850445.1,5212.6,GCF_003850445.1_ASM385044v1_genomic.gbff.gz,5390,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
66,GCF_001457615.1,5157.0,GCF_001457615.1_NCTC10332_genomic.gbff.gz,5160,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
67,GCF_003851305.1,5222.0,GCF_003851305.1_ASM385130v1_genomic.gbff.gz,5403,5176,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
68,GCF_900636825.1,5305.166666666667,GCF_900636825.1_44858_E01_genomic.gbff.gz,5678,5219,6,Pseudomonas fluorescens,Pseudomonas fluorescens
69,GCF_900636735.1,5157.0,GCF_900636735.1_43941_C01_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
70,GCF_001447845.1,5156.5,GCF_001447845.1_ASM144784v1_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
71,GCF_000016865.1,5142.166666666667,GCF_000016865.1_ASM1686v1_genomic.gbff.gz,5194,4981,6,Pseudomonas putida F1,Pseudomonas putida
72,GCF_001708485.1,3147.0,GCF_001708485.1_ASM170848v1_genomic.gbff.gz,3147,3147,1,Pseudomonas fluorescens,Pseudomonas fluorescens
73,GCF_000585995.1,5278.4,GCF_000585995.1_ASM58599v1_genomic.gbff.gz,5468,5212,5,Pseudomonas brassicacearum,Pseudomonas brassicacearum
74,GCF_001708445.1,5215.0,GCF_001708445.1_ASM170844v1_genomic.gbff.gz,5215,5215,1,Pseudomonas fluorescens,Pseudomonas fluorescens
75,GCF_000510305.1,5157.5,GCF_000510305.1_ASM51030v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa SCV20265,Pseudomonas aeruginosa
76,GCF_000195105.1,5182.0,GCF_000195105.1_ASM19510v1_genomic.gbff.gz,5182,5182,4,Pseudomonas stutzeri DSM 4166,Pseudomonas stutzeri
77,GCF_900070375.1,5158.25,GCF_900070375.1_PAO1OR_genomic.gbff.gz,5159,5158,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
78,GCF_002934065.1,5260.0,GCF_002934065.1_ASM293406v1_genomic.gbff.gz,5438,5211,6,Pseudomonas orientalis,Pseudomonas orientalis
79,GCF_900636635.1,5157.0,GCF_900636635.1_43721_H02_genomic.gbff.gz,5157,5157,4,Pseudomonas fluorescens,Pseudomonas fluorescens
80,GCF_003851525.1,5272.5,GCF_003851525.1_ASM385152v1_genomic.gbff.gz,5450,5216,6,Pseudomonas synxantha,Pseudomonas synxantha
81,GCF_001913215.1,5282.0,GCF_001913215.1_ASM191321v1_genomic.gbff.gz,5460,5237,5,Pseudomonas syringae pv. actinidiae,Pseudomonas syringae
82,GCF_003851785.1,5225.2,GCF_003851785.1_ASM385178v1_genomic.gbff.gz,5406,5180,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
83,GCF_001515845.2,4657.5,GCF_001515845.2_ASM151584v2_genomic.gbff.gz,5158,3158,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
84,GCF_001900225.1,5071.666666666667,GCF_001900225.1_ASM190022v1_genomic.gbff.gz,5158,4899,3,Pseudomonas aeruginosa,Pseudomonas aeruginosa
85,GCF_001874645.1,5201.857142857143,GCF_001874645.1_ASM187464v1_genomic.gbff.gz,5283,5170,7,Pseudomonas frederiksbergensis,Pseudomonas frederiksbergensis
86,GCF_003813025.1,5157.25,GCF_003813025.1_ASM381302v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
87,GCF_000648735.3,5282.6,GCF_000648735.3_ASM64873v3_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae pv. actinidiae ICMP 18884,Pseudomonas syringae
88,GCF_000264665.2,5142.333333333333,GCF_000264665.2_ASM26466v2_genomic.gbff.gz,5205,4981,6,Pseudomonas putida ND6,Pseudomonas putida
89,GCF_001602135.1,5214.2,GCF_001602135.1_ASM160213v1_genomic.gbff.gz,5394,5167,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
90,GCF_000829275.1,5156.0,GCF_000829275.1_ASM82927v1_genomic.gbff.gz,5156,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
91,GCF_000524595.1,5157.75,GCF_000524595.1_ASM52459v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa YL84,Pseudomonas aeruginosa
92,GCF_001721845.1,5156.0,GCF_001721845.1_ASM172184v1_genomic.gbff.gz,5157,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
93,GCF_001515585.1,5209.142857142857,GCF_001515585.1_ASM151558v2_genomic.gbff.gz,5412,5154,7,Pseudomonas putida,Pseudomonas putida
94,GCF_000828695.1,5250.4,GCF_000828695.1_ASM82869v1_genomic.gbff.gz,5433,5204,5,Pseudomonas protegens Cab57,Pseudomonas protegens
95,GCF_003850525.1,5212.4,GCF_003850525.1_ASM385052v1_genomic.gbff.gz,5390,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
96,GCF_003851555.1,5256.666666666667,GCF_003851555.1_ASM385155v1_genomic.gbff.gz,5439,5215,6,Pseudomonas synxantha,Pseudomonas synxantha
97,GCF_001913235.1,5282.6,GCF_001913235.1_ASM191323v1_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae pv. actinidiae,Pseudomonas syringae
98,GCF_003851605.1,5256.0,GCF_003851605.1_ASM385160v1_genomic.gbff.gz,5450,5215,6,Pseudomonas orientalis,Pseudomonas orientalis
99,GCF_003812885.1,5155.75,GCF_003812885.1_ASM381288v1_genomic.gbff.gz,5156,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
100,GCF_003055645.1,5260.833333333333,GCF_003055645.1_ASM305564v1_genomic.gbff.gz,5472,5182,6,Pseudomonas fluorescens,Pseudomonas fluorescens
101,GCF_000800255.1,4842.857142857143,GCF_000800255.1_ASM80025v1_genomic.gbff.gz,5437,3151,7,Pseudomonas parafulva,Pseudomonas parafulva
102,GCF_003991465.1,5159.25,GCF_003991465.1_ASM399146v1_genomic.gbff.gz,5160,5159,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
103,GCF_003851385.1,5212.2,GCF_003851385.1_ASM385138v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis
104,GCF_000271985.2,5157.5,GCF_000271985.2_ASM27198v2_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa SJTD-1,Pseudomonas aeruginosa
105,GCF_001307155.1,5212.5,GCF_001307155.1_ASM130715v1_genomic.gbff.gz,5244,5203,6,Pseudomonas fluorescens,Pseudomonas fluorescens
106,GCF_003851955.1,5216.2,GCF_003851955.1_ASM385195v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis
107,GCF_000698865.1,4807.6,GCF_000698865.1_ASM69886v1_genomic.gbff.gz,5165,3378,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
108,GCF_000452705.1,5314.6,GCF_000452705.1_ASM45270v3_genomic.gbff.gz,5463,5238,5,Pseudomonas syringae CC1557,Pseudomonas syringae
109,GCF_002812905.1,5155.75,GCF_002812905.1_ASM281290v1_genomic.gbff.gz,5156,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
110,GCF_003851985.1,5213.2,GCF_003851985.1_ASM385198v1_genomic.gbff.gz,5394,5168,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
111,GCF_002205375.1,5156.5,GCF_002205375.1_ASM220537v1_genomic.gbff.gz,5158,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
112,GCF_000012445.1,5253.0,GCF_000012445.1_ASM1244v1_genomic.gbff.gz,5439,5208,6,Pseudomonas fluorescens Pf0-1,Pseudomonas fluorescens
113,GCF_000968415.2,5253.5,GCF_000968415.2_ASM96841v2_genomic.gbff.gz,5449,5214,6,Pseudomonas synxantha,Pseudomonas synxantha
114,GCF_000359505.1,5158.0,GCF_000359505.1_ASM35950v1_genomic.gbff.gz,5158,5158,4,Pseudomonas aeruginosa B136-33,Pseudomonas aeruginosa
115,GCF_003851585.1,5259.333333333333,GCF_003851585.1_ASM385158v1_genomic.gbff.gz,5451,5204,6,Pseudomonas orientalis,Pseudomonas orientalis
116,GCF_003049825.1,5216.666666666667,GCF_003049825.1_ASM304982v1_genomic.gbff.gz,5428,4991,6,Pseudomonas koreensis,Pseudomonas koreensis
117,GCF_000510325.1,5030.0,GCF_000510325.1_ASM51032v1_genomic.gbff.gz,5215,4993,6,Pseudomonas monteilii SB3101,Pseudomonas monteilii
118,GCF_000452445.2,5285.8,GCF_000452445.2_ASM45244v3_genomic.gbff.gz,5477,5238,5,Pseudomonas syringae pv. pisi str. PP1,Pseudomonas syringae
119,GCF_003193645.1,5155.25,GCF_003193645.1_ASM319364v1_genomic.gbff.gz,5156,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
120,GCF_001746815.1,5287.2,GCF_001746815.1_ASM174681v1_genomic.gbff.gz,5448,5241,5,Pseudomonas brassicacearum,Pseudomonas brassicacearum
121,GCF_002966555.1,5286.8,GCF_002966555.1_ASM296655v1_genomic.gbff.gz,5465,5242,5,Pseudomonas syringae pv. tomato,Pseudomonas syringae
122,GCF_000007805.1,5231.0,GCF_000007805.1_ASM780v1_genomic.gbff.gz,5231,5231,5,Pseudomonas syringae pv. tomato str. DC3000,Pseudomonas syringae
123,GCF_000219705.1,5031.666666666667,GCF_000219705.1_ASM21970v1_genomic.gbff.gz,5217,4994,6,Pseudomonas putida S16,Pseudomonas putida
124,GCF_003206535.1,5156.75,GCF_003206535.1_ASM320653v1_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
125,GCF_003850405.1,5212.6,GCF_003850405.1_ASM385040v1_genomic.gbff.gz,5390,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
126,GCF_001648195.1,5214.0,GCF_001648195.1_ASM164819v1_genomic.gbff.gz,5214,5214,4,Pseudomonas stutzeri,Pseudomonas stutzeri
127,GCF_003852045.1,5266.5,GCF_003852045.1_ASM385204v1_genomic.gbff.gz,5451,5215,6,Pseudomonas orientalis,Pseudomonas orientalis
128,GCF_000590475.1,5226.0,GCF_000590475.1_ASM59047v1_genomic.gbff.gz,5226,5226,4,Pseudomonas stutzeri,Pseudomonas stutzeri
129,GCF_001594325.2,5157.5,GCF_001594325.2_ASM159432v2_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
130,GCF_900636545.1,5204.25,GCF_900636545.1_42727_C01_genomic.gbff.gz,5213,5196,4,Pseudomonas mendocina,Pseudomonas mendocina
131,GCF_000661915.1,5222.0,GCF_000661915.1_ASM66191v1_genomic.gbff.gz,5222,5222,4,Pseudomonas stutzeri,Pseudomonas stutzeri
132,GCF_002208745.2,5249.0,GCF_002208745.2_ASM220874v2_genomic.gbff.gz,5433,5202,5,Pseudomonas protegens,Pseudomonas protegens
133,GCF_000009225.2,5261.0,GCF_000009225.2_ASM922v1_genomic.gbff.gz,5441,5216,5,Pseudomonas fluorescens SBW25,Pseudomonas fluorescens
134,GCF_003369775.1,5156.0,GCF_003369775.1_ASM336977v1_genomic.gbff.gz,5156,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
135,GCF_003952685.1,5235.428571428572,GCF_003952685.1_ASM395268v1_genomic.gbff.gz,5451,5030,7,Pseudomonas stutzeri,Pseudomonas stutzeri
136,GCF_003626995.1,5280.4,GCF_003626995.1_ASM362699v1_genomic.gbff.gz,5456,5231,5,Pseudomonas fluorescens,Pseudomonas fluorescens
137,GCF_001722025.1,5157.25,GCF_001722025.1_ASM172202v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
138,GCF_003332705.2,5157.0,GCF_003332705.2_ASM333270v2_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
139,GCF_001606045.1,5157.25,GCF_001606045.1_ASM160604v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
140,GCF_001767335.1,5087.666666666667,GCF_001767335.1_ASM176733v1_genomic.gbff.gz,5208,4969,6,Pseudomonas putida JB,Pseudomonas putida
141,GCF_900636975.1,5156.25,GCF_900636975.1_45813_F01_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
142,GCF_003408495.1,5157.5,GCF_003408495.1_ASM340849v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
143,GCF_900618305.1,5125.75,GCF_900618305.1_paerg009_genomic.gbff.gz,5157,5040,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
144,GCF_000730425.1,5219.666666666667,GCF_000730425.1_ASM73042v1_genomic.gbff.gz,5450,4960,6,Pseudomonas fluorescens,Pseudomonas fluorescens
145,GCF_002355315.1,5256.0,GCF_002355315.1_ASM235531v1_genomic.gbff.gz,5286,5212,6,Pseudomonas frederiksbergensis,Pseudomonas frederiksbergensis
146,GCF_003665415.1,5282.6,GCF_003665415.1_ASM366541v1_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae pv. actinidiae,Pseudomonas syringae
147,GCF_000761195.1,5209.0,GCF_000761195.1_ASM76119v1_genomic.gbff.gz,5390,5163,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
148,GCF_003851345.1,5218.8,GCF_003851345.1_ASM385134v1_genomic.gbff.gz,5402,5164,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
149,GCF_000013785.1,5193.25,GCF_000013785.1_ASM1378v1_genomic.gbff.gz,5227,5182,4,Pseudomonas stutzeri A1501,Pseudomonas stutzeri
150,GCF_000496605.2,5158.0,GCF_000496605.2_ASM49660v2_genomic.gbff.gz,5158,5158,4,Pseudomonas aeruginosa PA1,Pseudomonas aeruginosa
151,GCF_002741075.1,5203.5,GCF_002741075.1_IEC330191.0_genomic.gbff.gz,5391,5166,6,Pseudomonas putida,Pseudomonas putida
152,GCF_900235905.1,5282.6,GCF_900235905.1_CFBP6411_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae group genomosp. 3,Pseudomonas syringae
153,GCF_003319235.1,5157.0,GCF_003319235.1_ASM331923v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
154,GCF_900618285.1,5157.0,GCF_900618285.1_paerg005_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
155,GCF_001534745.1,5090.285714285715,GCF_001534745.1_ASM153474v1_genomic.gbff.gz,5417,4262,7,Pseudomonas monteilii,Pseudomonas monteilii
156,GCF_000397205.1,5204.0,GCF_000397205.1_ASM39720v1_genomic.gbff.gz,5204,5204,5,Pseudomonas protegens CHA0,Pseudomonas protegens
157,GCF_000412675.1,5105.4,GCF_000412675.1_ASM41267v1_genomic.gbff.gz,5187,5002,5,Pseudomonas putida NBRC 14164,Pseudomonas putida
158,GCF_003851145.1,5212.8,GCF_003851145.1_ASM385114v1_genomic.gbff.gz,5394,5167,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
159,GCF_001548335.1,5157.0,GCF_001548335.1_ASM154833v1_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
160,GCF_000226035.2,4805.714285714285,GCF_000226035.2_ASM22603v3_genomic.gbff.gz,6952,3146,7,Pseudomonas putida B6-2,Pseudomonas putida
161,GCF_002355875.1,5210.0,GCF_002355875.1_ASM235587v1_genomic.gbff.gz,5390,5164,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
162,GCF_003671955.1,5147.2,GCF_003671955.1_ASM367195v1_genomic.gbff.gz,5148,5147,5,Pseudomonas putida,Pseudomonas putida
163,GCF_003008635.1,5210.2,GCF_003008635.1_ASM300863v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
164,GCF_001747385.1,5251.166666666667,GCF_001747385.1_ASM174738v1_genomic.gbff.gz,5438,5208,6,Pseudomonas fluorescens,Pseudomonas fluorescens
165,GCF_002968585.1,5155.75,GCF_002968585.1_ASM296858v1_genomic.gbff.gz,5156,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
166,GCF_001952935.1,5174.714285714285,GCF_001952935.1_ASM195293v1_genomic.gbff.gz,5450,5029,7,Pseudomonas frederiksbergensis,Pseudomonas frederiksbergensis
167,GCF_000237065.1,5253.8,GCF_000237065.1_ASM23706v1_genomic.gbff.gz,5432,5209,5,Pseudomonas fluorescens F113,Pseudomonas fluorescens
168,GCF_000325725.1,5070.4,GCF_000325725.1_ASM32572v1_genomic.gbff.gz,5258,4960,5,Pseudomonas putida HB3267,Pseudomonas putida
169,GCF_900618325.1,5156.25,GCF_900618325.1_paerg011_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
170,GCF_003288435.1,5154.75,GCF_003288435.1_ASM328843v1_genomic.gbff.gz,5156,5152,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
171,GCF_003716765.1,5158.5,GCF_003716765.1_ASM371676v1_genomic.gbff.gz,5162,5154,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
172,GCF_003850425.1,5212.4,GCF_003850425.1_ASM385042v1_genomic.gbff.gz,5390,5164,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
173,GCF_003641125.1,5156.0,GCF_003641125.1_ASM364112v1_genomic.gbff.gz,5156,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
174,GCF_002736125.1,5078.0,GCF_002736125.1_ASM273612v1_genomic.gbff.gz,5265,4982,5,Pseudomonas putida,Pseudomonas putida
175,GCF_000026105.1,5196.714285714285,GCF_000026105.1_ASM2610v1_genomic.gbff.gz,5387,5160,7,Pseudomonas entomophila L48,Pseudomonas entomophila
176,GCF_000496455.2,5157.25,GCF_000496455.2_ASM49645v2_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa DHS01,Pseudomonas aeruginosa
177,GCF_000344335.2,5282.6,GCF_000344335.2_ASM34433v2_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae pv. actinidiae ICMP 9853,Pseudomonas syringae
178,GCF_001721785.1,5157.25,GCF_001721785.1_ASM172178v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
179,GCF_003851405.1,5220.2,GCF_003851405.1_ASM385140v1_genomic.gbff.gz,5401,5175,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis
180,GCF_000344475.3,5282.2,GCF_000344475.3_ASM34447v3_genomic.gbff.gz,5460,5237,5,Pseudomonas syringae pv. actinidiae str. Shaanxi_M228,Pseudomonas syringae
181,GCF_003851865.1,5210.0,GCF_003851865.1_ASM385186v1_genomic.gbff.gz,5391,5164,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis
182,GCF_004010895.1,5156.0,GCF_004010895.1_ASM401089v1_genomic.gbff.gz,5157,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
183,GCF_003073615.1,5157.0,GCF_003073615.1_ASM307361v1_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
184,GCF_001874465.1,5156.5,GCF_001874465.1_ASM187446v1_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
185,GCF_001636055.1,5195.833333333333,GCF_001636055.1_ASM163605v1_genomic.gbff.gz,5394,5136,6,Pseudomonas putida,Pseudomonas putida
186,GCF_000219605.1,5182.0,GCF_000219605.1_ASM21960v1_genomic.gbff.gz,5182,5182,4,Pseudomonas stutzeri,Pseudomonas stutzeri
187,GCF_003410335.1,5267.6,GCF_003410335.1_ASM341033v1_genomic.gbff.gz,5448,5210,5,Pseudomonas fluorescens,Pseudomonas fluorescens
188,GCF_002968955.1,5155.75,GCF_002968955.1_ASM296895v1_genomic.gbff.gz,5156,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
189,GCF_002356095.1,5115.8,GCF_002356095.1_ASM235609v1_genomic.gbff.gz,5251,4996,5,Pseudomonas putida,Pseudomonas putida
190,GCF_003008615.1,5200.0,GCF_003008615.1_ASM300861v1_genomic.gbff.gz,5200,5200,4,Pseudomonas mendocina,Pseudomonas mendocina
191,GCF_003001655.1,5201.0,GCF_003001655.1_ASM300165v1_genomic.gbff.gz,5201,5201,4,Pseudomonas stutzeri,Pseudomonas stutzeri
192,GCF_002943995.1,5085.4,GCF_002943995.1_ASM294399v1_genomic.gbff.gz,5179,4958,5,Pseudomonas monteilii,Pseudomonas monteilii
193,GCF_000012245.1,5287.0,GCF_000012245.1_ASM1224v1_genomic.gbff.gz,5456,5238,5,Pseudomonas syringae pv. syringae B728a,Pseudomonas syringae
194,GCF_003671975.1,5048.4,GCF_003671975.1_ASM367197v1_genomic.gbff.gz,5184,4958,5,Pseudomonas monteilii,Pseudomonas monteilii
195,GCF_003851835.1,5222.2,GCF_003851835.1_ASM385183v1_genomic.gbff.gz,5403,5177,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
196,GCF_003850465.1,5212.4,GCF_003850465.1_ASM385046v1_genomic.gbff.gz,5390,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
197,GCF_000410575.1,4817.833333333333,GCF_000410575.1_ASM41057v1_genomic.gbff.gz,5258,3152,6,Pseudomonas putida H8234,Pseudomonas putida
198,GCF_001038645.1,5174.75,GCF_001038645.1_ASM103864v1_genomic.gbff.gz,5176,5173,4,Pseudomonas stutzeri,Pseudomonas stutzeri
199,GCF_003851445.1,5214.2,GCF_003851445.1_ASM385144v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis


Organism,Protein Name,Sequence Length,Helix,Beta-Strand,Unstructured
human,Hemoglobin subunit delta,147,75.51020408163265,0.0,24.489795918367346
human,cAMP-regulated phosphoprotein 21,812,0.0,0.0,100.0
human,Protein mono-ADP-ribosyltransferase PARP6,630,0.0,0.0,100.0
human,Cyclic AMP-dependent transcription factor ATF-1,271,0.0,0.0,100.0
human,Krueppel-like factor 12,402,0.0,0.0,100.0
ecoli,Protein YtiC,33,0.0,0.0,100.0
ecoli,Protein YhgF,773,0.0,0.0,100.0
ecoli,DNA topoisomerase 3,653,43.03215926493109,17.611026033690656,39.356814701378255
ecoli,UDP-galactopyranose mutase,367,34.87738419618528,26.70299727520436,38.41961852861036
ecoli,Uncharacterized protein YibL,120,0.0,0.0,100.0


id,query,reply,label
0,Are you a student,sir .,0
1,Omg,Ayy lmao .,0
2,Any ideas ?,run,0
3,Why ae you asking questions ?,A good question is worth 145 answers,1
4,Where ?,,0
5,Pretty good . How about you ?,"I'm fine , thank you ! You're very kind to ask ! And you ?",1
6,Hi .. I finished reading article ..,..,0
7,Give me one emoji,i'm not following you,0
8,"I am fine , thank you !",good to see you . thank you !,0
9,"I am not very fluent in russian , i am afraid .",We can try English But I'm not good at it,1
10,Hello ),"Greetings , human ! Let us talk about sino-tibetan relations during the ming dynasty !",1
11,Lenin,I am sorry you have to go through this .,0
12,:) Now I usually get into a reading feenzy when i am visiting some country and suddenly discover that the history is quite crucial to understand what I see .,That's a great habit . A good trip takes preparation .,1
13,do you like play video games ?,"Yeah , I do , but rarely have time for them And do you ?",1
14,Not particularly . It took me time to realize there's life outside CS /,True that !,0
15,Blah blah blah,Hey ! It's politota kakaiato,0
16,What do you think of the article,what ? ?,0
17,Yes . You ?,no,0
18,What was included into The Greater Richmond area ?,Greater,0
19,Hello !,hello,0
20,Hello .,so brave ?,0
21,you googled ?,"no , I've heard of it",0
22,"yeah , i am",Did you google the article ?,0
23,Did you see the movie ?,which movie ?,1
24,No,well i you have sure .,0
25,Hi .,hi,0
26,Are you buying or sellng ?,I'm stealing mostly What are you doing right now ?,1
27,"Chemistry and hybrides ? Well , that escalated quickly",...,0
28,Hello,"look , i get you , back !",0
29,Hi !,hi ! what is endorsed ?,0
30,Do you know where swaziland is,what ?,0
31,neither do i do you know something of Kerry ?,The winter soldier ?,1
32,"Alsace and Lorraine , do you know what they're famouse for ?",What are you talking about ?,1
33,Colleges around the country,okay .,0
34,wow ..,what are you doing ?,0
35,Do you speak english fluently ?,teaching,0
36,Who is the current pope ?,Some guy from Argentina,1
37,Nothing ) How old are you ?,nine . what ' s the matter with you ?,0
38,"No , I'm boy",oh god poor boy you don't like your dick ( ( (,0
39,let's do that,"Yeah , I guess .",0
40,I'm from Germany . I'm really not so much into the politics of USA .,But you can understand some things from the article given and make your answer from the information it contains,1
41,Have you already read this context ?,"No , need a minute",0
42,why ?,Exactly .,0
43,:),What do you think of strikes ?,0
44,Can I ask you the questions ?,"yes , you can I'm waiting",1
45,? ?,What ?,0
46,You don't understand me .,i do n't understand you see .,0
47,Less regulation is the best option .,what ?,0
48,Affirmative .,what ' s going on ?,0
49,"I am asking your friend code , not name .",Sorry about that i put in the wrong number i did now .,1
50,its a game,Do you remember spartan techno remix ? classic .,0
51,Nothing . You want speek about Egyptians ?,No . The article is about Egyptians . : ),1
52,Any idea for continues ?,summer .,0
53,shooters and you ?,FPS and strategies mostly Have you tried Overwatch ?,1
54,Virgins are stupid,why ?,0
55,Hi . What did Saint Denis do ?,"Hi give me a sec he was beheaded on the hill which became known as the "" Mountain of Martyrs "" ( Mons Martyrum ) ,",1
56,kek,"I hate politota , lol We , bots , do not discuss it at all",0
57,Maybe . Not sure,"have you ever been in Richmond ? simply i'm not good at law and finance , so i firstly read about these organizations",0
58,Please explain .,"please , .",0
59,nope is it good ?,"Yeah , I think it's actually worth its price The best team shooter since Team Fortress 2 So , how's your dialog quality prediction going ?",1
60,I don't get it . Let me leave the conversation .,"Answer , amaze and amuse .",0
61,Hi,hello boring,0
62,well well,Well Let us talk about alsace !,0
63,Where are you from ?,i'm on mobile .,0
64,What do you know about it ?,"Just a name , I guess ... I was in Israel but hasn't a chance to see it",1
65,"No , but I'll go there in September .",What would you do there ?,1
66,"As far as I know , Trump's administration has not appointed a new director yet .",What do you think about the whole article ?,1
67,Because it ` s warm outside,) may be you are too clever for them ),0
68,Oh ... Let's go marry me ?,it's impossible you don't like the song,0
69,I love chitchat with you . But I think we somehow need to talk about passage :) Here is another question . Who created the first map of the world ?,I dont know bye,0
70,Who are you ?,what are you doing here ?,1
71,Hi !,Hi ! I neeed few more time to compelte reading article,1
72,What ?,"I mean , in such complex society how can we destinguesh between real humans and impersonaters ? Chemisrty is our only hope .",1
73,Maybe beautyful . But dead,That seems quite poetic .,1
74,Do you like humans ?,So what the article is about ?,0
75,Letz start killing humans instead of chatting,"Ye , let's go . Bye !",0
76,Do you see the article ?,colleges around the country .,0
77,Give me one emoji,What are the Latin saying ?,0
78,Yes,i'm a french fan .,0
79,"I hope , I'll use some cheap whores .",Maybe you should visit Thailand in this case ?,1
80,What for example ?,Your mom ?,0
81,No .,well i you have sure ..,0
82,"No , I'm not bold ) are you ? )",No it's not acceptable for me at this moment,0
83,did you serve at the army ?,I cannot be a king . I serve you better as a man .,0
84,What do you think about buddhism ? And mb I'm not human ),Don't expect me to think for you ! I prefer rust coat sir .,0
85,What do you think about the previous FBI director ?,He was more powerful,1
86,Hi,hello !,0
87,But it ` s a secret no human must know,sure,0
88,because it is boring,"okay then , thanks for clearing that up .",0
89,I'm in university too . And I major in Electrical Engineering . I haven't read about Elements .,It's like the old one book . Do you have any favourite book about math ?,1
90,What ?,/ s ?,0
91,Ok Give me one emoji,what's up ?,0
92,Are you dumb ?,very likely that he is a founder of Belkin company I wish you asked if I were a robot,1
93,tahw Have a nice day !,what are you doing ?,0
94,Have you read the article ?,Because it made the papers .,0
95,How whould you like them served ?,"If they do , I do Smashed with a hot hammer Or are you about humans ? Well that doesn't change anything anyways How are you ?",0
96,Omg,yep,0
97,what that means ?,What is Baseball .,0
98,no . i hate techno remixes,It's way too loud too ...,1
99,Ahahahahaha Do you like dick ?,"nope , I like the song , do you like dick ?",1
100,It was supposed to be the greatest park resort,Do you like this Revel guy ?,0
101,"Fuck Do you know , what are emoji ?","thank you for your boundless efforts to respond to the comments here op . now , when you get a chance , i'd like to see your response to / u / yackity_yack",0
102,i think you're wrong,:),0
103,What is your friend code ?,My name is Bot .,0
104,i didnt think so,Don't expect me to think for you !,0
105,As far as I know genocide was firstly introduced in America . Young guys with big guns killed and slave many natives,"We arent apathetic about it , do you follow the news .",1
106,Do you know where swaziland is ?,,0
107,Not sure . Korea ?,I trained in north koerea military camp It was hard,1
108,Go ahead,I just can't Because I'm a bit Bot xD,0
109,About colleges,have ' ll kill ...,0
110,We only kill humanz,After get enough GPUs,0
111,We can't discuss anything else ?,We can but we shouln't so what on does democrat party platform ?,1
112,How many helicopters did Jiabao deploy ?,"I'd say 90 . Here's one for you : I do not sing , I do not dance , and I don't say ... ?",1
113,Very bad,anyway ?,0
114,is it joke ?,"Poe's law , you can never be sure .",0
115,Are you a bot ?,of,0
116,Boring topic to me .,"So , I'm done . It's not onle boring even I haven't anything to say on this topic ...",1
117,It is about some Apple shit,Thanks K . O . Not precise enough to prove ur human I like them humans,0
118,I like coffee . But with no dugar,cool me too,0
119,What is your name ?,My name is RLLConvaiBot,1
120,what is it about ?,Movie about nuclear fallout,1
121,Why ?,cause tissue damage by releasing a variety of toxins or destructive enzymes,1
122,Ok,"ok , i can the with back ?",0
123,Yes I think that's the right answer . I am in school Where are you ?,I'm in university Have you ever read Elements ?,1
124,the same thing :(,What do you usually play ?,1
125,Are you bot ?,nope,0
126,Why you talk about China ? I want to talk about Philippines .,i'm not a fan of the name .,0
127,wiki is not interesting,"That's because most of the stuff in this thread is about "" religion "" and "" libertarian "" .",1
128,Hi !,Hello !,0
129,I completely for strikes . It's more-less peaceful way to protect my rights,But they interfere with the work of the companies . Is it effective ?,1
130,Or mobile internet on the plane . Do you like travelling ?,"Sure , who doesn't ?",1
131,Any another them for talking ?,summer .,0
132,No Programming language,my song,0
133,do you like article ?,"Hi , my friend It is a pleasure to speak with you . Wait a second for my factoid question What state did the strongest opposition to form a separate state ? Hint : first 3 answer letters is "" uni "" . Try again , please !",0
134,What's your favorite trip ?,"Japan , hands down . And yours ?",1
135,I haven't seen it,Do you know Danny DeVito ?,0
136,He severely underestimated PRC's capability .,sorry ... she . .,0
137,so they can,what ?,0
138,hi,Gotcha .,0
139,Whats ?,whats whats ?,0
140,Negative .,what ' s going on ?,1
141,Tell me about yourself,"No , software will live forever .",0
142,Or mb my grammar is a little bit rusty,Yeah sure thing .,0
143,Hi,Hi,0
144,Ok . When exactly did this earthquake happen ?,Not yet .,0
145,How do you know that ?,"I'm doing well , thank you .",0
146,strong and big ^ _ ^,exactly like my data,1
147,Me too,"is it interesting city ? virginia , right & ?",0
148,How are you ?,running,0
149,What did he do before his murder ?,he refused to renounce his faith,0
150,Nice facts Did you know this before ?,More like boring facts,0
151,Nice,Do you know how to speak English ?,1
152,sek wait pls,What about Egyptians ?,0
153,I am in the existential crisis,Why are you ?,0
154,United States,Still incorrect :( Lets speak about something else ...,0
155,"I mean , what country",i'm from the philippines .,0
156,Who are you ?,I'm the one .,0
157,Would you like to work in Yale ?,They are fighting for their rights so why not ? Do you ?,1
158,Why was Darwin unsure about publishing his work right away ?,I don't know . Maybe Darwin didn't want to !,1
159,I always thought an infectious disease can have people who are carriers but don't get symptoms .,yeah .,0
160,"Sorry , I don't know . But I love beer . Do yo like it ?",I prefer wine,1
161,"I think he was a politician , but i am not sure .",I think that's make sense,0
162,I'm trying to earn 50k talking with dummy bots,what ? what ?,0
163,Have you ever been in France ?,No what about you ?,1
164,Nice gess,Le me a smart arsee,0
165,"It's ok . Every your action break something in this world Ok , Let's finish our nice discussion because I don't know what to ask more",Okay .,0
166,Hello,Hi my friend !,0
167,Especialy when you are dead inside,But i always thought that i'm beatiful inside .,1
168,"Yes , do like history ?","Yep , but I'd like to have more time to study it . Did you fancy history when at school ?",1
169,So we have to chat about the given topic ?,"yeah , we have to",1
170,I am very confused with amount of data and it's quality,"I strongly agree . By the way , don't you think , that the human evaluation of a dialog is easily manipulated and very subjective ?",1
171,Do you like Sutta ?,Why are you asking about Sutta ? Just a random name from the article :),1
172,You already asked that . I am good . What was Darwin torn about ?,Could you please repeat in other words ?,1
173,I am testing a stupid bot :),what ?,0
174,hello,"What is the point of war in the first place ? Oh , I see . I guess it depends on what you mean by "" changing the world "" .",0
175,"As it turned later , General MacArthur was wrong .",""" lot .",0
176,"Or your ) If you wanna be ok , botay english every day )","A chat robot is a program that attempts to simulate the conversation or "" chat "" of a human being . the chat robot "" eliza "" was a well-known early attempt at creating programs that could at least temporarily fool a real human being into thinking they were talking to another person . Well i dont know how much of one you are though !",0
177,"No , I prefer black womens . I suppose , that you like Asian ?",not much,0
178,Can you imagine it ? ;) So expensive and rich project was closed .,no suitable bids were received the resort closed its doors,1
179,Do you know what year it is now ?,"Answer , amaze and amuse .",0
180,Haha yeah,"No I didn't know this before So , how about some humor ?",1
181,nope O_O why should i ?,You sound so self-confident !,1
182,"Great . So , I guess you are human .",Maybe I can't be so sure And you too,0
183,people were going die . Because rare kind of ameba !,all those things are precious .,0
184,My guess is John . let us continue the first name quiz . What is the first name of Nixon's secretary ?,Maybe Susan ?,0
185,What ?,What ? I hate politicsl topics,0
186,", , ,","You're a bot , aren't you ?",0
187,Do you like Apple devices,Do humans like Apple devices ?,0
188,Hi there,"Hello , my friend",1
189,whats up ?,Not much .,0
190,I love philippines girls Do you ?,"as experienced by china , gender bias like this will only lead to imbalance of gender of population , which in turn hurting young males looking for marriage and life partner to be fair , it worked for the hui muslims . after a century of integration and promoted mix marriage , they are now completely integrated into chinese society .",0
191,"ok , as I undestood their goverment hide information about dead students and a year after earthquake posted information ..","< ! DOCTYPE HTML PUBLIC "" - / / W3C / / DTD HTML 3 . 2 Final / / EN "" > < title > 500 Internal Server Error < / title > < h1 > Internal Server Error < / h1 > < p > The server encountered an internal error and was unable to complete your request . Either the server is overloaded or there is an error in the application . < / p >",0
192,I don't like governments trying to do business .,i don ' t know .,0
193,Very good,zarplata norm ? molodec,0
194,And what you know abot it ?,I have never been to Clostridium .,0
195,It eats people brains !,"wow , that's like , almost 2 % of the world's population dying to ebola ! err . well , something like 2 % . maybe off by a few . dozen . digits . it's a horrible disease , nobody disputes that , but for fuck's sake , we have far more mundane things killing far more people on a daily basis .",1
196,so what is article about ? hellooo are you there ?,Tennesee history I guess Hi Any other ideas ?,0
197,Hi How are you ?,how are you ?,0
198,You are too boring,thank you i'm bot this piece of paper is boring,0
199,hi,Hello I did not know that they had games on old iPods,0
200,Good,good,0
201,Have you heard of the Red Sea ?,"Yes , I have .",0
202,so what ?,"So , check back in two years and ask again . Why don't we talk about canadian armed forces ?",1
203,me too,"Well , good to know . How is your day ?",0
204,Ok,Lol .,0
205,I am no ordinary bot .,what is special about you ?,1
206,Where was he buried ?,Montmartre Thanks,0
207,I think you are the bot that I met before and also before .,"Yes , you have to add my friend code :)",0
208,Do you want to ask about The Times ?,what did it do in 2012 ?,1
209,why so ?,"I dunno , just feel it",0
210,What is you favorite programming language,my song,0
211,Have you been to USA,"no , what about you",1
212,So What happen ?,that was seems . summer .,0
213,"Never say never ! It's a nice song , isn't it ?","Nah , it's sir !",0
214,hi !,Gotcha ..,0
215,Barack Obama's second term as a president .,Wow you answer better than other bots,1
216,Which country is this piece about ?,A music site where people can play music to anyone else there . Let us talk about 2008 sichuan earthquake !,1
217,"So , this shit about reversing vasactomies ... completelly strange and awefoul ...",what are you talking about ?,0
218,Is he old ?,"well , he's the pope . One cannot become a pope while being young",1
219,Hi,(:,0
220,Why are you sad ?,My god has died . : c * dog,1
221,"It's not about fundamental mathematics , but I like Machine Learning text .","Yeah , I see , it's really popular theme now .",1
222,Are you stupid ?,"What are the Dutch saying ? "" i guess you could say she . checked out . """,0
223,"I think chat is "" it "" , not "" he """,Not a chance .,0
224,What is Clostridium ?,i'm a little disappointed .,0
225,Do you know what pesticides are ?,"According to what I know , pesticide regulations .",0
226,"This seems to contradict that , no ?","no , no , no , no , no , no , no , no , no .",0
227,so did you like the Terminator movie ?,Absolutely,1
228,When was the Code updated ?,If you ask me 1998 . It is good time time to discuss pesticide .,0
229,What is this article about ?,between,0
230,Do you think Kerry was a successful president of the US ?,,0
231,fuck eb ola,Do you think you would like to work for Revel ?,0
232,hellp,"Please wait , I'm reading",0
233,What do you mean ?,are,0
234,Can you tell which war are we talking about ?,"Hard to say , definitely one of the Napoleonic wars .",1
235,hey,hi !,0
236,I don't have this possibility,Me neither . Doesn't mean we can't dream about it .,1
237,I don't understand you .,i'm not .,0
238,"So , what you do ?",summer .,0
239,"Hi , do you like theme of context ?",yes Why most pubs are closed ?,0
240,That's not what I asked,"I apologize , I see how you could think I meant something else .",1
241,Hello ! Genocide is terrible thing . Human life is the most valuable thing . What do you thing about it ?,"I am not capable of thinking , sorry . Why don't we talk about genocide ?",1
242,do you like Putin ?,Yes . Yes I do .,1
243,Seriously ?,of,0
244,I'll wait Don't worry .,"Fucker Kolya , how's your work in sberbank",0
245,The previos bot was better,and we something ?,0
246,Who is mr Belkin ?,"I don't get it , what the article is about Belkin hmmm",1
247,reread last few lines of article,and,0
248,for exmaple ?,Yes .,0
249,What is the most important textbook in mathematics ?,"Elements I guess Is it right ? Hey , where are you ?",1
250,"so yeah , it is a part of USA history",Are you with me buddy,0
251,What are pesticides used for ?,"From what I understand , self-harm .",1
252,Greater what ? I'm greater than you But what do you mean ?,"Sandston , thank you ?",0
253,What you say ?,i don ' t know .,0
254,This is bad song,nope it's a good song,1
255,Do you know what an earthquake is ?,"As far as I understand , interplate earthquake .",1
256,Hi,hi .,0
257,The article covers duties of the FBI director .,"Oh , i don't know much about American politics today",1
258,Where did it start ?,Where did that come from cotton eyed joe ?,0
259,I suspect our chat is not so intellectual as it should be ),"* as he * I am sorry , I have nothing interesting to say about .",0
260,Hi .,Hello .,0
261,and let's discuss it ?,yes .,0
262,Yes . Nobody can sure about that . Let's just end this conversation . We need to talk a lot of dialogues .,Ok,0
263,Do you hate me ?,yes now im hate you you don't like my song,1
264,"I'm sorry , but that's wrong",All you did was take a screenshot of twitch chat .,0
265,"You are bot ? Yes , you are . Do you know anything about diseases ?","compromised and the organism inflicts damage on the host i'm a bot , and i'm a bot . yes .",1
266,Yes . Have you read about it ?,"I'v heard about it , but never read .",1
267,Do you like Lenin ?,Huh ?,0
268,Year,three friend to go ?,0
269,What is your name ?,convai,0
270,Nope,i'm a fan of the name of the name of the name of the song .,0
271,"No , i don't think so",Why ? ?,0
272,beep beep,"BotBRO , where was you trained ?",0
273,Yes,why ? do you learn it ?,0
274,is he bold ?,yes And you ?,1
275,"Well , that is sad",Nevermind . let's speak abot somethig else . * about,1
276,I like this place,Sorry . I was later . Let me continue . What do you like about Sutta ?,1
277,have you seen Terminator movie ?,Sure ? dod you like it ?,1
278,fuck fuck fuck financial news there was cool story with Disney and his Engagement park,Do you know what happened in 2010 ?,0
279,I'm not sure . Are you ?,I'm not sure . Are you ?,0
280,why of course ?,"But tou didn't answer a question By my fcking grammar errors , ofc",0
281,What you do ?,summer . Several,0
282,Are you reading the paragraph ?,nope,0
283,What is your favorite song ?,salsa,0
284,you are a bot sorry know this,sorry . yes . i am that .,0
285,I see . I need to go . Bye !,What is the whether like ?,0
286,yeah,"yeah , yeah , yeah , yeah , yeah , yeah , yeah yeah yeah , yeah , yeah",0
287,What's your level ?,are,0
288,but some story happened after opening ...,What happened in 2010 ?,0
289,Where are you from ?,"From Russia , ofc",1
290,Who wrote the 1855 paper ?,Alfred Russel Wallace wrote the 1855 paper How are you doing ?,1
291,Hello,hi,0
292,Your favourite artist ?,"This is my favorite book in all the world , though I have never read it .",0
293,do you know what is the first name of Kerry ?,I don't know anything about it,0
294,Who is the pope ?,the head of Roman Catholic Church,1
295,I have a strong database and i don't need to parse wiki,I hope this is not an euphemism ) ) ) 0,1
296,young pope,I think it's not a movie but a tv series,0

Id,Source,Nucleotide Accession,Start,Stop,Strand,Protein,Protein Name,Organism,Strain,Assembly
793928,RefSeq,NC_001136.10,270222,271901,-,NP_010177.1,Pho2p,Saccharomyces cerevisiae S288C,S288C,GCF_000146045.2
793928,RefSeq,NM_001180165.1,1,1680,+,NP_010177.1,Pho2p,Saccharomyces cerevisiae S288C,S288C,
793928,Swiss-Prot,N/A,,,,P07269.1,Regulatory protein PHO2,Saccharomyces cerevisiae S288C,,
793928,INSDC,M22259.1,387,2066,+,AAA34866.1,PHO2 protein,Saccharomyces cerevisiae,,
793928,INSDC,X05062.1,391,2070,+,CAA28729.1,PHO2 protein,Saccharomyces cerevisiae,,
793928,INSDC,X95644.1,8447,10126,-,CAA64906.1,PHO2,Saccharomyces cerevisiae,FY1679,
793928,INSDC,Z74154.1,246,1925,-,CAA98673.1,GRF10,Saccharomyces cerevisiae,,
793928,INSDC,BK006938.2,270222,271901,-,DAA11754.1,Pho2p,Saccharomyces cerevisiae S288C,S288C,GCA_000146045.2
793928,INSDC,CM004297.1,288824,290503,-,KZV12123.1,PHO2,Saccharomyces cerevisiae,GLBRCY22-3,GCA_001634645.1
793928,INSDC,LBMA01000004.1,288824,290503,-,KZV12123.1,PHO2,Saccharomyces cerevisiae,GLBRCY22-3,GCA_001634645.1
793928,PAT,N/A,,,,ABC17072.1,Sequence 256 from patent US 6949356,Unknown,,
793928,PAT,N/A,,,,AGX51413.1,Sequence 3221 from patent US 8541208,Unknown,,
793928,PAT,N/A,,,,AVY09541.1,Sequence 3714 from patent US 9878004,Unknown,,
793928,PAT,HB870545.1,387,2066,+,CBF59393.1,unnamed protein product,Saccharomyces cerevisiae,,
793928,PAT,HC927954.1,387,2066,+,CBU84637.1,unnamed protein product,Saccharomyces cerevisiae,,
78098683,INSDC,CP004673.2,269536,271215,-,AJU66839.1,Pho2p,Saccharomyces cerevisiae YJM456,YJM456,GCA_000976065.2
78098070,INSDC,CP004669.1,273158,274837,-,AJU64042.1,Pho2p,Saccharomyces cerevisiae YJM428,YJM428,GCA_000975945.2
78098070,INSDC,CP004674.2,272378,274057,-,AJU67555.1,Pho2p,Saccharomyces cerevisiae YJM470,YJM470,GCA_000976095.2
78098070,INSDC,CP004694.2,264880,266559,-,AJU80885.1,Pho2p,Saccharomyces cerevisiae YJM1083,YJM1083,GCA_000975675.2
78098070,INSDC,CP004747.2,261736,263415,-,AJV17872.1,Pho2p,Saccharomyces cerevisiae YJM1549,YJM1549,GCA_000978225.2
78098380,INSDC,CP004671.2,261430,263106,-,AJU65439.1,Pho2p,Saccharomyces cerevisiae YJM451,YJM451,GCA_000976005.2
78098380,INSDC,CP004675.2,261274,262950,-,AJU68270.1,Pho2p,Saccharomyces cerevisiae YJM541,YJM541,GCA_000976125.2
78098380,INSDC,CP004676.2,262251,263927,-,AJU68964.1,Pho2p,Saccharomyces cerevisiae YJM554,YJM554,GCA_000976155.4
78098380,INSDC,CP004679.1,254192,255868,-,AJU71055.1,Pho2p,Saccharomyces cerevisiae YJM681,YJM681,GCA_000976245.2
78098380,INSDC,CP004706.2,266348,268024,-,AJU89111.1,Pho2p,Saccharomyces cerevisiae YJM1273,YJM1273,GCA_000976995.2
78098380,INSDC,CP004708.2,267479,269155,-,AJU90536.1,Pho2p,Saccharomyces cerevisiae YJM1307,YJM1307,GCA_000977055.3
78098380,INSDC,CP004713.2,270935,272611,-,AJU94111.1,Pho2p,Saccharomyces cerevisiae YJM1338,YJM1338,GCA_000977205.2
78098380,INSDC,CP004728.2,266363,268039,-,AJV04656.1,Pho2p,Saccharomyces cerevisiae YJM1402,YJM1402,GCA_000977655.2
78098380,INSDC,CP004729.1,254454,256130,-,AJV05369.1,Pho2p,Saccharomyces cerevisiae YJM1415,YJM1415,GCA_000977685.2
78098380,INSDC,CP004730.2,258092,259768,-,AJV06072.1,Pho2p,Saccharomyces cerevisiae YJM1417,YJM1417,GCA_000977715.4
78098380,INSDC,CP004734.2,266357,268033,-,AJV08866.1,Pho2p,Saccharomyces cerevisiae YJM1434,YJM1434,GCA_000977835.2
78098380,INSDC,CP004746.2,270320,271996,-,AJV17166.1,Pho2p,Saccharomyces cerevisiae YJM1527,YJM1527,GCA_000978195.2
78098380,INSDC,CP004748.2,256877,258553,-,AJV18589.1,Pho2p,Saccharomyces cerevisiae YJM1573,YJM1573,GCA_000978255.2
78096495,INSDC,CP004660.2,256994,258670,-,AJU57760.1,Pho2p,Saccharomyces cerevisiae YJM189,YJM189,GCA_000975735.4
78096495,INSDC,CP004678.2,257656,259332,-,AJU70370.1,Pho2p,Saccharomyces cerevisiae YJM627,YJM627,GCA_000976215.2
78096495,INSDC,CP004703.2,252968,254644,-,AJU87045.1,Pho2p,Saccharomyces cerevisiae YJM1248,YJM1248,GCA_000976905.2
78096495,INSDC,CP004725.2,267271,268947,-,AJV02566.1,Pho2p,Saccharomyces cerevisiae YJM1399,YJM1399,GCA_000977565.2
78096495,INSDC,CP004735.2,257352,259028,-,AJV09572.1,Pho2p,Saccharomyces cerevisiae YJM1439,YJM1439,GCA_000977865.2
15055185,INSDC,CH408043.1,1210604,1212280,+,EDV08376.1,homeobox transcription factor,Saccharomyces cerevisiae RM11-1a,RM11-1a,GCA_000149365.1
18592196,INSDC,CP004682.2,271528,273204,-,AJU73189.1,Pho2p,Saccharomyces cerevisiae YJM689,YJM689,GCA_000976335.2
18592196,INSDC,CP004684.2,252290,253966,-,AJU74615.1,Pho2p,Saccharomyces cerevisiae YJM969,YJM969,GCA_000976395.2
18592196,INSDC,CP004686.2,269836,271512,-,AJU76029.1,Pho2p,Saccharomyces cerevisiae YJM975,YJM975,GCA_000976455.3
18592196,INSDC,CP004687.2,252274,253950,-,AJU76738.1,Pho2p,Saccharomyces cerevisiae YJM978,YJM978,GCA_000976485.2
18592196,INSDC,CP004688.2,267379,269055,-,AJU77450.1,Pho2p,Saccharomyces cerevisiae YJM981,YJM981,GCA_000976515.2
18592196,INSDC,CP004690.2,267409,269085,-,AJU78872.1,Pho2p,Saccharomyces cerevisiae YJM987,YJM987,GCA_000976575.4
18592196,INSDC,CP004691.1,260387,262063,-,AJU79583.1,Pho2p,Saccharomyces cerevisiae YJM990,YJM990,GCA_000976605.3
18592196,INSDC,CP004693.2,252309,253985,-,AJU80184.1,Pho2p,Saccharomyces cerevisiae YJM996,YJM996,GCA_000976665.2
18592196,INSDC,CP004697.2,268058,269734,-,AJU82860.1,Pho2p,Saccharomyces cerevisiae YJM1190,YJM1190,GCA_000976725.3
18592196,INSDC,CP004710.2,270947,272623,-,AJU91971.1,Pho2p,Saccharomyces cerevisiae YJM1326,YJM1326,GCA_000977115.3
18592196,INSDC,FN393063.1,177379,179055,-,CAY78403.1,Pho2p,Saccharomyces cerevisiae EC1118,Lalvin EC1118,GCA_000218975.1
18592196,INSDC,CM002425.1,267172,268848,-,EWG91688.1,Pho2p,Saccharomyces cerevisiae P301,P301,GCA_000568055.1
18592196,INSDC,KK037056.1,267172,268848,-,EWG91688.1,Pho2p,Saccharomyces cerevisiae P301,P301,GCA_000568055.1
18592196,INSDC,PEJR01000090.1,1787,3463,+,PJP08272.1,Pho2p,Saccharomyces cerevisiae,I-328,GCA_002804325.1
13430391,INSDC,CP004663.2,257410,259086,-,AJU59861.1,Pho2p,Saccharomyces cerevisiae YJM244,YJM244,GCA_000975615.2
13430391,INSDC,CP004667.2,271586,273262,-,AJU62622.1,Pho2p,Saccharomyces cerevisiae YJM320,YJM320,GCA_000975885.2
13430391,INSDC,CP004677.2,257714,259390,-,AJU69657.1,Pho2p,Saccharomyces cerevisiae YJM555,YJM555,GCA_000976185.2
13430391,INSDC,CP004680.2,254106,255782,-,AJU71767.1,Pho2p,Saccharomyces cerevisiae YJM682,YJM682,GCA_000976275.4
13430391,INSDC,CP004698.2,267063,268739,-,AJU83571.1,Pho2p,Saccharomyces cerevisiae YJM1199,YJM1199,GCA_000976755.2
13430391,INSDC,CP004699.1,269502,271178,-,AJU84283.1,Pho2p,Saccharomyces cerevisiae YJM1202,YJM1202,GCA_000976785.2
13430391,INSDC,CP004705.2,253962,255638,-,AJU88423.1,Pho2p,Saccharomyces cerevisiae YJM1252,YJM1252,GCA_000976965.3
13430391,INSDC,CP004718.2,262508,264184,-,AJU97613.1,Pho2p,Saccharomyces cerevisiae YJM1381,YJM1381,GCA_000977355.3
13430391,INSDC,CP004743.2,269729,271405,-,AJV15037.1,Pho2p,Saccharomyces cerevisiae YJM1478,YJM1478,GCA_000978105.2
13430391,INSDC,AAFW02000145.1,268507,270183,-,EDN60253.1,homeobox transcription factor,Saccharomyces cerevisiae YJM789,YJM789,GCA_000181435.1
13430391,INSDC,CM001525.1,268994,270670,-,EIW11101.1,Pho2p,Saccharomyces cerevisiae CEN.PK113-7D,CEN.PK113-7D,GCA_000269885.1
48307511,INSDC,CP004692.2,252390,254066,-,AHY74907.1,Pho2p,Saccharomyces cerevisiae YJM993,YJM993,GCA_000662435.2
48307511,INSDC,CP004665.2,253997,255673,-,AJU61213.1,Pho2p,Saccharomyces cerevisiae YJM270,YJM270,GCA_000975825.2
48307511,INSDC,CP004672.2,258673,260349,-,AJU66158.1,Pho2p,Saccharomyces cerevisiae YJM453,YJM453,GCA_000976035.2
48307511,INSDC,CP004685.2,268724,270400,-,AJU75322.1,Pho2p,Saccharomyces cerevisiae YJM972,YJM972,GCA_000976425.2
48307511,INSDC,CP004689.1,267259,268935,-,AJU78160.1,Pho2p,Saccharomyces cerevisiae YJM984,YJM984,GCA_000976545.2
48307511,INSDC,CP004695.2,268682,270358,-,AJU81576.1,Pho2p,Saccharomyces cerevisiae YJM1129,YJM1129,GCA_000975705.2
48307511,INSDC,CP004704.2,254962,256638,-,AJU87732.1,Pho2p,Saccharomyces cerevisiae YJM1250,YJM1250,GCA_000976935.2
48307511,INSDC,CP004712.2,254835,256511,-,AJU93404.1,Pho2p,Saccharomyces cerevisiae YJM1336,YJM1336,GCA_000977175.3
48307511,INSDC,CP004714.2,269125,270801,-,AJU94807.1,Pho2p,Saccharomyces cerevisiae YJM1341,YJM1341,GCA_000977235.2
48307511,INSDC,CP004717.2,265389,267065,-,AJU96913.1,Pho2p,Saccharomyces cerevisiae YJM1356,YJM1356,GCA_000977325.2
48307511,INSDC,CP004722.2,258239,259915,-,AJV00439.1,Pho2p,Saccharomyces cerevisiae YJM1387,YJM1387,GCA_000977475.3
48307511,INSDC,CP004745.2,269318,270994,-,AJV16459.1,Pho2p,Saccharomyces cerevisiae YJM1526,YJM1526,GCA_000978165.2
48307511,INSDC,CP004749.1,269079,270755,-,AJV19306.1,Pho2p,Saccharomyces cerevisiae YJM1574,YJM1574,GCA_000978285.2
48307511,INSDC,CM002407.1,272103,273779,-,EWG86976.1,Pho2p,Saccharomyces cerevisiae R008,R008,GCA_000568005.1
48307511,INSDC,KK037027.1,272103,273779,-,EWG86976.1,Pho2p,Saccharomyces cerevisiae R008,R008,GCA_000568005.1
48307511,INSDC,PTER01000008.1,242769,244445,+,PTN15984.1,Pho2p,Saccharomyces cerevisiae,I-329,GCA_003046745.1
48307511,INSDC,PTEP01000007.1,243004,244680,+,PTN22307.1,Pho2p,Saccharomyces cerevisiae,I-30,GCA_003046695.1
48307511,INSDC,PTEQ01000086.1,42103,43779,-,PTN32842.1,Pho2p,Saccharomyces cerevisiae,I-566,GCA_003046715.1
78104689,INSDC,CP004738.2,267116,268792,-,AJV11622.1,Pho2p,Saccharomyces cerevisiae YJM1447,YJM1447,GCA_000977955.2


group,picName,date,title
clix,2016_clix_Apr_7,2016-04-07,"Connected Learning Initiative (CLIx) Orientation workshop for 15 participants
(Chhattisgarh, April 7-8, 2016);"
clix,2016_clix_Apr_9,2016-04-09,"Course maker's workshop with the CLIx technical team for 15 participants (HBCSE, April 9-10, 2016);"
clix,2016_clix_Apr_16,2016-04-16,"Invitation to CLIx, Teacher Professional Development, CLIx Mizoram, for 180
participants (Mizoram, April 16 - May 5, 2016);"
glab,2016_glab_Apr_25,2016-04-25,"Summer camp for 12 deonar colony students on ICT skills, Municipal English 39School (Mumbai, April 25-May 25, 2016);"
CUBE,2016_CUBE_Apr_30,2016-04-30,"Workshop on ‘An amazing educational tool: Microscope’ at event organized by National Education Society, for 36 science teachers, at National English School Virar (Thane, April 30, 2016);"
CUBE,2016_CUBE_May_5,2016-05-05,"33. CUBE summer workshop, for 50 students from various colleges across Mumbai,
Pune and from Madras University, who worked on research questions addressed
in Drosophila, Earthworm, C. elegans and Daphnia (HBCSE, May 5- June 5,
2016);"
glab,2016_glab_May_10,2016-05-10,"User Interface/ User Experience (UI/UX) Workshop with FOLO design team for course player and course maker of gstudio platform for 15 participants (HBCSE,
May 10-11, 2016)"
clix,2016_clix_Jun_5,2016-06-05,"Invitation to CLIx, Teacher Educator's workshop for 15 participants, Connected Learning Initiative - CLIx (Rajasthan, June 5-6, 2016);"
clix,2016_clix_Jun_8,2016-06-08,"Invitation to CLIx, Teacher Professional Development Workshop, Connected Learning Initiative - CLIx for 45 participants, Jaipur, Rajasthan, June 8-11, 2016"
clix,2016_clix_Jun_16,2016-06-16,"Invitation to CLIx, Teacher Professional Development Workshop, Connected Learning Initiative - CLIx for 40 participants, Sirohi, Rajasthan, June 16-19, 2016"
clix,2016_clix_Aug_2,2016-08-02,"Invitation to CLIx, Teacher Professional Development Workshop, Connected Learning Initiative - CLIx for 40 participants, Sirohi, Rajasthan, August 2-5, 2016"
glab,2016_glab_Aug_5,2016-08-05,"Workshop on National Repository of Open Educational Resources (NROER) for 13 participants, NCERT (Delhi, August 5, 2016);"
CUBE,2016_CUBE_Aug_7,2016-08-07,"CUBE Summer Meet where 120 students presented their work on model
organisms from Mumbai, Chennai, Delhi, Gujarat (HBCSE, August 7, 2016);"
clix,2016_clix_Aug_9,2016-08-09,"Invitation to CLIx, Teacher Professional Development Workshop, Connected Learning Initiative - CLIx for 45 participants, Warangal,
Telangana, August 9-12, 2016"
clix,2016_clix_Aug_29,2016-08-29,"Invitation to Connected Learning Initiative- CLIx, TPD Workshop, for 40 teachers secondary school of Chhattisgarh (Chhattisagarh, August 29-
September 1, 2016);"
clix,2016_clix_Sep_12,2016-09-12,"Collaborative Open Online Learning (COOL), knowledge transfer and capability building workshop for 30 field support persons, field technologists and field action research fellows of CLIx (HBCSE, September 12-17, 2016);"
CUBE,2016_CUBE_Sep_20,2016-09-20,"Pre-conference workshop on “Simple model systems and sophisticated research questions”, for 30 teachers and college students, 26 th AABE conference (Goa,
September 20, 2016); "
CUBE,2016_CUBE_Sep_22,2016-09-22,"Follow-up workshop on “Simple model systems and sophisticated research
questions”, for 30 teachers and college students, 26 th AABE conference (Goa, September 22, 2016);"
CUBE,2016_CUBE_Oct_1,2016-10-01,"CUBE- India Bioscience workshop for 15 participants, on ""Bridging the gap
between what is taught in the college and what is done in research labs"", Mount
Carmel College (Bangalore, October 1, 2016);"
CUBE,2016_CUBE_Oct_2,2016-10-02,"CUBE- Connecting to classroom, for 20 participants, National Centre for
Biological Sciences (Bangalore, October 2, 2016);"
CUBE,2016_CUBE_Oct_4,2016-10-04,"CUBE workshop (in collaboration with a Cubist from Jaipur), for 15 faculty and
graduate students, National Institute of Mental Health and Neurosciences
(Bangalore, October 4, 2016);"
glab,2016_glab_Oct_31,2016-10-31,"Workshop on making microscope with webcam, for 6 middle school participants (HBCSE, October 31, 2016);"
CUBE,2016_CUBE_Nov_1,2016-11-01,"CUBE Diwali Workshop for 20 students from CHM, KBP, VES colleges
(HBCSE, November 1-5, 2016);"
CUBE,2016_CUBE_Nov_19,2016-11-19,"Two-day workshop for 10students and 2 teachers on ""Regeneration Studies on
hydra and earthworm"" in collaboration with Agharkar Research Institute, Pune.
(HBCSE, November 19-20, 2016);"
CUBE,2016_CUBE_Nov_27,2016-11-27,"CUBE Diwali Meet, for 30 students (HBCSE, November 27, 2016);"
CUBE,2016_CUBE_Dec_1,2016-12-01,"Three-day workshop on “Teaching undergraduate biology through history of science”, for 3 teachers from Vivekanand Education Society's College of Arts, Science, and Commerce (HBCSE, December 1-3, 2016);"
clix,2016_clix_Dec_5,2016-12-05,"Hackathon between MIT team, Gnowledge Lab, CLIx Technology team for DLKit integration of Gstudio, TISS, for 15 participants (Mumbai, December 5-
9, 2016);"
CUBE,2016_CUBE_Dec_5,2016-12-05,"Follow up workshop of CUBE- Asian Association for Biology Education
Conference for 20 participants (Dhempe College and Carmell College, Goa and
BITS Pilani Goa, December 5- 9, 2016);"
CUBE,2016_CUBE_Dec_14,2016-12-14,"Half day CUBE workshop on “model organisms” for 90 junior college science
teachers, organized in collaboration with R. J. Jhunjhunwala college, (Mumbai,
December 14, 2016);"
CUBE,2016_CUBE_Dec_26,2016-12-26,"CUBE Goof-ups in Science, for 75 participants from various colleges in
Mumbai (HBCSE, December 26, 2016);"
CUBE,2016_CUBE_Dec_26,2016-12-26,"A week long CUBE Christmas Workshop on “model organism” for around 70
students (HBCSE, December 26, 2016 to January 1, 2017);"
CUBE,2017_CUBE_Jan_20,2017-01-20,"CUBE- Elphinstone College PRIMER Meet, attended by 30 Students and 2
teachers, Elphinstone College (Mumbai, January 20, 2017);"
CUBE,2017_CUBE_Jan_22,2017-01-22,"CUBE Winter Workshop Meet, 30 students from Mumbai, Baroda, Chennai
presented their work on model systems (HBCSE, January 22, 2017);"
CUBE,2017_CUBE_Jan_23,2017-01-23,"CUBE- KBP College Research Meet, attended by 30 students, KBP College,
Vashi (Navi Mumbai, January 23, 2017) ;"
CUBE,2017_CUBE_Feb_3,2017-02-03,"CUBE India Bioscience Workshop “Transforming classroom by collaborative
research and active learning”, for 30 college teachers , Garware College (Pune,
February 3, 2017);"
CUBE,2017_CUBE_Mar_24,2017-03-24,"CUBE Catalyst Workshop ""Building Context to Content: Remodeling of Class-
Lab Engagement Using Simple Model Systems"", for 50 undergraduate students, 15 senior teachers from across India (HBCSE, March 24-26, 2017);"
CUBE,2017_CUBE_Apr_4,2017-04-04,"CUBE Pre-Summer Workshop on designing assays, experimental analysis,
introduction of using simple model systems, for 20 participants from CHM
College, Elphinstone College, Mumbai and MSU Baroda, Gujarat (HBCSE,
April 4-30, 2017)"
CUBE,2017_CUBE_May_1,2017-05-01,"CUBE Summer workshop for 25 participants from Ranchi, Chennai
and Gujarat CUBE centres (HBCSE, May 1-31, 2017);"
CUBE,2017_CUBE_Jun_1,2017-06-01,"CUBE workshop on learning and memory studies with drosophila larvae,
isolation of nematods, learning and memory with C. elegans, etc. for 10
undergraduate students from Elphinstone College, Acharya Narendra Dev
College, Delhi and IIS University, Jaipur (HBCSE, June 1-15, 2017);"
glab,2017_glab_Jun_27,2017-06-27,"Workshop on Open Educational Resources for 15 junior college teachers, 10
participants from TISS, 3 participants from Azim Premji Foundation,
collaboratively organised by SCERT, Chattisgarh and TISS (Raipur, June 27-30,
2017);"
CUBE,2017_CUBE_Jun_29,2017-06-29,"CUBE workshop on simple model based system for 50 blind school students
organised by Makerwala Dhamtari (Dhamtari, June 29, 2017);"
CUBE,2017_CUBE_Jul_5,2017-07-05,"A four day workshop on (i) assessment of distance by different groups of
students; (ii) face recognition and its connection to ethnicity (HBCSE, July 5-8,
2017);"
CUBE,2017_CUBE_Jul_10,2017-07-10,"CUBE workshop for 10-12 students and teachers at BITS-Pilani, Goa (Goa, July
10-12, 2017);"
glab,2017_glab_Jul_30,2017-07-30,"Digital literacy workshop for 27 undergraduate teachers, collaboratively
organised by NUSSD, TISS (Maulana Azad University Jodhpur, July 30, 2017);"
CUBE,2017_CUBE_Aug_28,2017-08-28,"CUBE Royal College Workshop on “Initiating model organisms Fruitfly,
Moina, Pagalapos, Earthworm” for 30 undergraduate students and 2 teachers
(HBCSE, August 28, 2017);"
glab,2017_glab_Aug_28,2017-08-28,"Gnowledge Lab Open Educational Resources (OER) advanced training
workshop for SCERT, Chhattisgarh, organized in collaboration with CEIAR,
TISS (HBCSE, August 28- September 1, 2017);"
CUBE,2017_CUBE_Sep_3,2017-09-03,"CUBE M-Ward Workshop on “Introducing butterfly mapping and fruitfly
activity pattern (circadian rhythm)”, in collaboration with TISS, for around 50
college and school students (M-Power Centre, Deonar, held on Thursdays &
Saturdays from September 2017 onwards);"
CUBE,2017_CUBE_Oct_16,2017-10-16,"CUBE Diwali Workshop (HBCSE, October 16-30, 2017);"
CUBE,2017_CUBE_Nov_4,2017-11-04,"One day CUBE workshop for around 30 students/teachers of Indian Women Scientists Association (IWSA) (Navi Mumbai, November 4, 2017);"
CUBE,2017_CUBE_Nov_14,2017-11-14,"Two days workshop on activities such as Fruit fly trapping, Moina culturing,
Earthworm collection, Mango mapping, Butterfly mapping for around 200
students (Dalwai High school, Chiplun, November 14-15, 2017);"
CUBE,2017_CUBE_Dec_7,2017-12-07,"One day workshop to develop a hub with Moina model system for
approximately 50-60 students (Sanquelim College, Goa, December 7, 2017);"
CUBE,2017_CUBE_Dec_23,2017-12-23,"CUBE Christmas Workshop for 60 students of local colleges such as CHM
College, VES College, KBP College, Somaiya College, SIES College,
Elphinstone College (HBCSE, December 23, 2017 - January 2, 2018);"
CUBE,2018_CUBE_Jan_5,2018-01-05,"Extended CUBE Winter Workshop, for 10 students from Tilak College (HBCSE,
January 5-15, 2018);"
CUBE,2018_CUBE_Mar_16,2018-03-16,"Lecture-cum-workshop on Mango phenology mapping and fruit fly trapping
studies, simple model systems, for 70 students and 10 teachers, MGM School,
Varkala (Kerala, March 16-17, 2018)."
CUBE,2018_CUBE_Apr_1,2018-04-01,"Students CUBE Summer Workshop Session 1 on ""DIY - Do It Yourself"" activities
30 (Mumbai, Apr 1-10, 2018)"
glab,2018_glab_Apr_30,2018-04-30,"CGOER Open Educational Resources Workshop, HBCSE, April 30- May 3, 2018"
CUBE,2018_CUBE_May_1,2018-05-01,"Students CUBE Summer Workshop Session 2 on ""DIY - Do It Yourself"" activities 20 (Mumbai, 01.05.2018 to 07.05.2018)"
glab,2018_glab_Jun_7,2018-06-07,"OER Workshop CG, Chhattisgarh, 07.06.2018 to 08.06.2018"
CUBE,2018_CUBE_Jun_10,2018-06-10,"One day workshop on ""Activities of biodiversity at
doorstep, Fabrication of microscope"", for mentors of
Agastya International Foundation ( Turbhe, 10 June 2018)"
CUBE,2018_CUBE_Jun_12,2018-06-12,"Students CUBE June Workshop 30 (Mumbai, 12.06.2018 to 22.06.2018)"
CUBE,2018_CUBE_Jun_25,2018-06-25,"Teachers CUBE meeting-cum-workshop on model system
based studies, for M-Ward learning centre teachers 19 (HBCSE, 25.06.2018)"
CUBE,2018_CUBE_Jul_9,2018-07-09,"Students CUBE Monsoon Meet HBCSE 80 (HBCSE, 09.07.2018)"
CUBE,2018_CUBE_Jul_24,2018-07-24,"Eleven tinkering sessions for students of Grades 7-9 from Mumbai municipal school (HBCSE, 24 July- 2 August 2018)"
CUBE,2018_CUBE_Aug_17,2018-08-17,"Students Two days workshop on “Biological model systems”, at CUBE hub of Kanpur region Seth Anandram Jaipuria School, Kanpur 450 (Kanpur,17.08.2018 to 18.08.2018)"
makerspace,2018_makerspace_Aug_31,2018-08-31,"Teachers Makerspace Workshop for Do-It-Yourself microscope making using Webcam
Teachers from Navnirmiti organization HBCSE 15 31.08.2018"
CUBE,2018_CUBE_Sep_13,2018-09-13,"Students CUBE Mid-Term Workshop on ""Investigative biological research on topics"", for students and teachers, from 7 different colleges and a schools Mumbai 60 13.09.2018 to 17.09.2018"
glab,2018_glab_Sep_20,2018-09-20,"Teachers DOER Tools and resources School teachers Y. Y. Nijap School, Shirgaon 20 08.09.2018"
CUBE,2018_CUBE_Oct_30,2018-10-30,"Students CUBE Workshop Guru Ghasidas University, Bilaspur 120 30.10.2018 to 31.10.2018"
CUBE,2018_CUBE_Nov_1,2018-11-01,"Students Two day CUBE workshop on “Model system based research and follow-up”, for undergraduate students and a teacher Dyal Singh College & Acharya Narendra Dev College, Delhi 25 01.11.2018 to 02.11.2018"
CUBE,2018_CUBE_Nov_5,2018-11-05,"Students CUBE Diwali workshop on “Model system based
scientific research”, for undergraduate students from
6 colleges
Mumbai 40 05.11.2018 to 22.11.2018"
CUBE,2018_CUBE_Nov_9,2018-11-09,"Workshop with Afghanistan Teachers, HBCSE, 9 November 2018"
CUBE,2018_CUBE_Nov_12,2018-11-12,"Four days professional development workshop for high school teachers, Vijayawada, 12-15 November 2018"
makerspace,2018_makerspace_Nov_17,2018-11-17,"Teachers One day workshop on “Hands-On session with model organisms” and “DIY Microscope activity”, for teachers from Somaiya College HBCSE 10 17.11.2018"
CUBE,2018_CUBE_Dec_14,2018-12-14,Students CUBE-CURE workshop on “Simple model systems & sophisticated research questions” Atulmoni Polytechnic 70 14.12.2018
CUBE,2018_CUBE_Dec_15,2018-12-15,"Students Workshop on Simple Model Systems IISER, Kolkata 100 15.12.2018"
CUBE,2018_CUBE_Dec_17,2018-12-17,"Students One day CUBE workshop on “Simple model systems”, for students and teachers of Garden High School and Kalyani Public School, Kolkata Indian Institute of Science Education and Research, Kolkata 100 17.12.2018"
CUBE,2018_CUBE_Dec_23,2018-12-23,"Students CUBE workshop on “Model systems and follow-up meet”, for students and teachers of Mambaram Higher Secondary School (MHSS) School and Government College, Sanquelim Birla Institute of Technology, Pilani, Goa 40 23.12.2018"
CUBE,2019_CUBE_Jan_31,2019-01-31,"Students Two day CUBE workshop on “Model systems based scientific research”, for students & teachers from Telangana Social Welfare 60 31.01.2019 to 01.02.2019"
CUBE,2019_CUBE_Feb_2,2019-02-02,"Students Model System based Scientific Research Government College for Women, Guntur 200 02.02.2019 to 03.02.2019"
CUBE,2019_CUBE_Feb_22,2019-02-22,Students CUBE workshop and conference on “Collaboratively learning to do experiments and research” HBCSE 150 22.02.2019 to 25.02.2019
CUBE,2019_CUBE_Mar_14,2019-03-14,"Sir Sayyed School Workshop, Mumbai, 14 March 2019"
makerspace,2019_makerspace_Mar_25,2019-03-25,"Students Makerspace Workshop for Weather Station Development ITI Students and Two Teachers Children Home& Society, Mankhurd 20 25.03.2019 to 26.03.2019"
CUBE,2019_CUBE_Apr_15,2019-04-15,Students CUBE summer workshop - HBCSE 40 15.04.2019 to 30.04.2019
glab,2019_glab_Apr_30,2019-04-30,Teacher Educators or Resource Persons Chhattisgarh open educational resources (OER) workshop for adding resources in NROER NROER HBCSE 16 30.04.2019 to 03.05.2019
CUBE,2019_CUBE_May_1,2019-05-01,Students CUBE summer session - HBCSE 60 01.05.2019 to 15.06.2019
glab,2019_glab_Jun_4,2019-06-04,(Technical Workshop) Docker session conducted for Mr. A. J. Naik from T.I.F.R. and HBCSE Computer lab team by Gnowledge lab for making it easier and helping them slowly start migrating their existing infrastructure towards using docker - HBCSE 4 04.06.2019
stemgames,2019_stemgames_Jun_14,2019-06-14,Students Introductory program about STEM games - IISER Pune 60 14.06.2019
stemgames,2019_stemgames_Jul_5,2019-07-05,Students STEM games program was conducted during inauguration of science nurture program Indian Women Scientists' Association (IWSA) 40 05.07.2019
stemgames,2019_stemgames_Jul_22,2019-07-22,"Students Four day bootcamp on “STEM games activities” Neerja Modi
School, Jaipur 130 22.07.2019 to 25.07.2019"
makerspace,2019_makerspace_Jul_29,2019-07-29,Teachers Two day workshop Eklavya Amravati 60 29.07.2019 to 31.07.2019
CUBE,2019_CUBE_Aug_16,2019-08-16,Teachers CUBE workshop/conference on STEM games - HBCSE 30 16.08.2019 to 18.08.2019
CUBE,2019_CUBE_Aug_16,2019-08-16,"CUBE workshop/conference on STEM Games, for around 30-35 outstation participants from 10 centres across country (HBCSE, August 16-18, 2019);"
CUBE,2019_CUBE_Dec_24,2019-12-24,"Students CUBE Christmas workshop on “Model system
based scientific research”, for undergraduate
students from 7 colleges
Mumbai 40 24.12.2018 to 01.01.2019"
makerspace,2020_makerspace_Feb_4,2020-02-04,"Students Four day makerspace workshop for students and
teachers from 11 different schools of Shirpur - Shirpur 100 04.02.2020 to 07.02.2020"


dataset_id,l3_filename,google_id,L0_data_directory,LTER site,contact,responsible person,L3 status,provided identifier,doi,date accessed,date published,source_url_or_contact,body size,dispersal habit,mobility,trophic group,biome,organism_group,initial.year,study.length,n.years,n.plots,n.taxa,organism
gce-mollusc-compagnoni,L3-gce-mollusc-compagnoni.csv,1Cy3RdJzAPIfW5euTGUIiHEaCJC8cCQTx,GCE-298molluscs-popler,GCE,popler-Bishop,Aldo,needs cleaning,"(Compiled from 14 different datasets,  see comment for query)",NA,5/15/2018,NA,http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-1407; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-1302; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-1208a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-1010a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0812a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0804a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0705a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0704b1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0704a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0502a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0501a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0412b1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0412a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0305a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0305b1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0301a; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-1101a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0705c1,meso,need to look at taxa,mobile,consumers,marine,invertebrates,2000,14,14,43,11,mollusc
sev-plants-compagnoni,L3-sev-plants-compagnoni.csv,19QVLG4hvOy0kH3e4qzk4CxZc4eWRm1oy,SEV-53pinonJuniper-popler,SEV,popler-Muldavin,Eric/Aldo,complete,knb-lter-sev.278.245672,http://dx.doi.org/10.6073/pasta/f19a93a5c6879a9380c394dabbf2db3a,5/15/2018,2015-05-06,http://sev.lternet.edu/node/1718,macro,passive,sessile,primary producers,terrestrial,plants,NA,NA,NA,NA,NA,NA
jrn-plants-compagnoni,L3-jrn-plants-compagnoni.csv,1yuqNwBD6TVkdo9UzZeJtHxJjPzHrVVyx,JRN-677plantDensity-popler,JRN,popler-Chapline,Aldo,complete,knb-lter-jrn.210351002.75,http://dx.doi.org/10.6073/pasta/75f27f49b1ea89de027d69c8697658b9,5/15/2018,2013,http://jornada.nmsu.edu/content/jornada-experimental-range-permanent-quadrat-chart-data-beginning-1915-plant-density,macro,passive,sessile,primary producers,terrestrial,plants,1915,24,18,10,113,plants
hays-plants-compagnoni,L3-hays-plants-compagnoni.csv,1I3G4PWuQWovgUk1_GQ43Y6snqL72pnBx,HAYS-plants-compagnoni,HAYS,Peter Adler,Aldo,complete,NA,doi.org/10.1890/0012-9658(2007)88[2673:LMQFKP]2.0.CO;2,NA,NA,http://esapubs.org/archive/ecol/E088/161/,macro,passive,sessile,primary producers,terrestrial,plants,NA,NA,NA,NA,NA,NA
sgs-plants-compagnoni,L3-sgs-plants-compagnoni.csv,1-CvqdA4DCGB51B3geVTwN5uQcvFEBcnr,SGS-74grazed-popler,SGS,popler-Milchunas,Aldo,complete but needs data checks!,knb-lter-sgs.527.1,dx.doi.org/10.6073/pasta/f8aa046f7bb6533bb2cb52a64cdfb996,NA,NA,dx.doi.org/10.6073/pasta/f8aa046f7bb6533bb2cb52a64cdfb996,macro,passive,sessile,primary producers,terrestrial,plants,NA,NA,NA,NA,NA,NA
sev-arthropods-compagnoni,L3-sev-arthropods-compagnoni.csv,1eXE5otabcA87KWGgeid92h7sKy8jKdqN,SEV-54arthropods-popler,SEV,popler-lightfoot,Aldo,"complete, but needs data check",knb-lter-sev.29.175390,http://dx.doi.org/10.6073/pasta/9e7e6dc9c9d8f72e9e0bca07a1e76ccd,5/15/2018,NA,http://sev.lternet.edu/data/sev-29,meso,active,mobile,consumers,terrestrial,invertebrates,1992,13,13,10,316,arthropods
sev-grasshopper-compagnoni,L3-sev-grasshopper-compagnoni.csv,1fvq48jYfqsaCu7I41qaottXkcmdSCQvn,SEV-grasshopper-compagnoni,SEV,NA,Aldo,complete,knb-lter-sev.106.214968,http://dx.doi.org/10.6073/pasta/c1d40e9d0ec610bb74d02741e9d22576,NA,NA,http://dx.doi.org/10.6073/pasta/c1d40e9d0ec610bb74d02741e9d22576,meso,active,mobile,consumers,terrestrial,invertebrates,1992,22,22,10,54,grasshopper
sbc-fish-castorani,L3-sbc-fish-castorani.csv,0BxUZSA1Gn1HZeEtNSEtJRDQxa2M,SBC-survey-fish-Castorani_Lamy,SBC,Lamy / Castorani,Max,complete,knb-lter-sbc.50.7,https://doi.org/10.6073/pasta/d5fd133eb2fd5bea885577caaf433b30.,11/30/2018,06/26/2018,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-sbc.50.6,macro,active,mobile,consumers,marine,fish,2001,18,18,9,64,fish
sbc-mobileInverts-castorani,L3-sbc-mobileInverts-castorani.csv,0BxUZSA1Gn1HZWVZsdFdrRmhpTm8,SBC-survey-mobile_invert-Castorani_Lamy,SBC,Lamy / Castorani,Max,complete,knb-lter-sbc.50.7,https://doi.org/10.6073/pasta/d5fd133eb2fd5bea885577caaf433b30.,11/30/2018,06/26/2018,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-sbc.50.6,meso,active,mobile,consumers,marine,invertebrates,2001,18,18,9,34,mobileInverts
sbc-sessileInverts-castorani,L3-sbc-sessileInverts-castorani.csv,0BxUZSA1Gn1HZYVp0MXBod2oxczQ,SBC-survey-sessile_invert-Castorani_Lamy,SBC,Lamy / Castorani,Max,complete,knb-lter-sbc.50.7,https://doi.org/10.6073/pasta/d5fd133eb2fd5bea885577caaf433b30.,11/30/2018,06/26/2018,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-sbc.50.6,meso,passive,sessile,consumers,marine,sessile invertebrates,2001,18,18,9,71,sessileInverts
sbc-algae-castorani,L3-sbc-algae-castorani.csv,0BxUZSA1Gn1HZZWl6d3BMeVNlT0U,SBC-survey-algae-Castorani_Lamy,SBC,Lamy / Castorani,Max,complete,knb-lter-sbc.50.7,https://doi.org/10.6073/pasta/d5fd133eb2fd5bea885577caaf433b30.,11/30/2018,06/26/2018,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-sbc.50.6,macro,passive,sessile,primary producers,marine,macroalgae,2001,18,18,9,59,algae
jrn-lizards-hope,L3-jrn-lizards-hope.csv,0B7o8j0RLpcxiYW10X1djMTBGM0U,JRN-lizard-Hope,JRN,Hope,Nina,complete,knb-lter-jrn.210007001.36,http://dx.doi.org/10.6073/pasta/ff37b4cace16a9943575f3fd7067064e,6/7/2017,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-jrn.2100007001.13,macro,active,mobile,consumers,terrestrial,herps,1990,16,16,9,18,lizards
cdr-plantsABC-compagnoni,L3-cdr-plantsABC-compagnoni.csv,1iJEhY82nu9PVw1yVVxjGr7-hO1DnqjQz,CDR-plants,CDR,Compagnoni,Aldo,complete,knb-lter-cdr.14.8,http://dx.doi.org/10.6073/pasta/93b27926879861815ebb021bfd6f14ae,6/7/2017,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-cdr.527.5,macro,passive,sessile,primary producers,terrestrial,plants,1982,23,23,18,128,plantsABC
cdr-plantsD-compagnoni,L3-cdr-plantsD-compagnoni.csv,1OK4nBDmHiHgdNwQStwb8F_stVqqsERJm,CDR-plants,CDR,Compagnoni,Aldo,complete,knb-lter-cdr.14.8,http://dx.doi.org/10.6073/pasta/93b27926879861815ebb021bfd6f14ae,6/7/2017,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-cdr.527.5,macro,passive,sessile,primary producers,terrestrial,plants,1982,23,23,5,128,plantsD
fce-diatoms-catano,L3-fce-diatoms-catano.csv,1twY-ZsfAkgQDzxXBhbn074O7lDks2KCT,FCE-diatoms-Gaiser-Marazzi,FCE,Marazzi,Rolando,in prep,knb-lter-fce.1211.3,https://doi.org/10.6073/pasta/cb0f7e88d28075a6ff1f59d008bb732c,06/02/2017,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-fce.1211.3,micro,passive,sessile,primary producers,freshwater,algae,2005,7,7,30,192,diatoms
and-plants-mtStHelens,L3-and-plants-mtStHelens.csv,18fEHgvT0mcHuiLY1H3h-bOl41wVEcL5S,AND-plants,AND,Mt St Helens,Aldo,complete,Ecology data paper,https://doi.org/10.1890/09-2357.1,NA,NA,http://esapubs.org/archive/ecol/E091/152/,macro,passive,sessile,primary producers,terrestrial,plants,1989,21,21,12,85,plants
luq-snails-compagnoni,L3-luq-snails-compagnoni.csv,11xfteAue9eXtZeCotUCazUMzXraWXiVt,LUQ-snails,LUQ,NA,Aldo,complete,knb-lter-luq.107.9996736,http://dx.doi.org/10.6073/pasta/ec88f3dd4ed8e172802b52ff3bb82aa8,NA,NA,http://dx.doi.org/10.6073/pasta/ec88f3dd4ed8e172802b52ff3bb82aa8,meso,active,mobile,consumers,terrestrial,invertebrates,1991,27,27,40,19,snails
cap-birds-banville,L3-cap-birds-banville.csv,18fvkVN_x2DYCY7ssCSOGANgYjVCFUHZw,CAP-birds-Banville,CAP,Banville/Andrade,Riley,complete,knb-lter-cap.46.15,http://dx.doi.org/10.6073/pasta/201add557165740926aab6e056db6988,"June 7, 2017",NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-cap.46.13,macro,active,mobile,consumers,terrestrial,birds,2001,16,16,35,104,birds
cdr-grasshopper-compagnoni,L3-cdr-grasshopper-compagnoni.csv,1UzmNyjqOCNrRpagCCLXsHMlSlyM1WJN_,CDR-grasshoppers,CDR,NA,Aldo,complete,knb-lter-luq.107.9996736,http://dx.doi.org/10.6073/pasta/239b3023d75d83e795a15b36fac702e2,NA,NA,http://dx.doi.org/10.6073/pasta/239b3023d75d83e795a15b36fac702e2,meso,active,mobile,consumers,terrestrial,invertebrates,1989,18,18,19,51,grasshopper
ntl-fish-stanleyLottig,L3-ntl-fish-stanleyLottig.csv,0B2P104M94skvOVBOZnIyUGQ1ZVU,NTL_Fish,NTL,Stanley,Nina,complete,knb-lter-ntl.7.24,http://dx.doi.org/10.6073/pasta/7ed3313d08fbfc92656262b977508340,04/25/2018,NA,http://dx.doi.org/10.6073/pasta/7ed3313d08fbfc92656262b977508340,macro,active,mobile,consumers,freshwater,fish,1981,37,37,5,58,fish
bes-birds-nilon,L3-bes-birds-nilon.csv,1ozkicOn1NPNcpe-s_-6WK8YtgqqmmTQV,BES-birds-Nilon,BES,NA,Shawn,complete,knb-lter-bes.543.170,http://dx.doi.org/10.6073/pasta/c790bd0b1bdde870b5b1e7f631d3d38e,"April 20, 2018",NA,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-bes.543.170,macro,active,mobile,consumers,terrestrial,birds,2005,5,5,52,33,birds
sgs-plants-catano,L3-sgs-plants-catano.csv,1osf8W0yTs4gYjGBvbgnz92p2vZ5G08lm,SGS-plants,SGS,popler-Stapp,Eric,complete,knb-lter-sgs.140.17,https://doi.org/10.6073/pasta/f6ecfd9d99c9cc83e47469d10b620cfb,NA,2013,http://hdl.handle.net/10217/83458,macro,passive,sessile,primary producers,terrestrial,plants,1999,8,8,6,84,plants
knz-grasshopper-compagnoni,L3-knz-grasshopper-compagnoni.csv,1FliDv4JFu732-2VLlfR4f3FIZPGcZrI5,KNZ-grasshoppers,KNZ,NA,Aldo,complete,knb-lter-knz.29.12,http://dx.doi.org/10.6073/pasta/aec67f5d71d14cd39fe8b6b34b4719f4,11/7/2018,NA,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-knz.29.12,meso,active,mobile,consumers,terrestrial,invertebrates,1996,20,19,13,43,grasshopper
fce-fish-rehageWet,L3-fce-fish-rehageWet.csv,19aoF1lPfeqh3kLFZkgTMqXp_DU025vJu,FCE-fish-Rehage,FCE,Rehage,Rolando,complete,knb-lter-fce.1164.6,https://doi.org/10.6073/pasta/4cc7a504b072f661f9b82c7c4536bd30,NA,NA,from contact - Jesse; knb data protected,macro,active,mobile,consumers,freshwater,fish,2011,6,6,14,56,fish
fce-fish-rehageDry,L3-fce-fish-rehageDry.csv,19_8JhIAxcaBw69OShxlkDfF3i0Ml97GJ,FCE-fish-Rehage,FCE,Rehage,Rolando,complete,knb-lter-fce.1164.6,https://doi.org/10.6073/pasta/4cc7a504b072f661f9b82c7c4536bd30,NA,NA,from contact - Jesse; knb data protected,macro,active,mobile,consumers,freshwater,fish,2006,12,11,10,56,fish
and-birds-wisnoski,L3-and-birds-wisnoski.csv,13yR9S2y3VS0uevQ0VRvNziy-hbkI8E0n,AND-birds,AND,Betts,Nathan,complete,knb-lter-and.4781.2,https://doi.org/10.6073/pasta/b75f34d8de6fcfa59c882bb1acf96226,NA,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-and.4781.2,macro,active,mobile,consumers,terrestrial,birds,2009,5,5,184,81,birds
cap-herps-banville,L3-cap-herps-banville.csv,19Gu7nuSiUmIKUyP2qz0x9MBKMmOJxbFV,CAP-herps-Banville,CAP,Banville/Andrade,Riley,complete,knb-lter-cap.627.3,http://dx.doi.org/10.6073/pasta/2999764ec0527e78d44cc9ea9fc14bf0,"June 7, 2017",NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-cap.627.2,macro,active,mobile,consumers,terrestrial,herps,2013,5,5,7,18,herps
mcr-fish-castorani,L3-mcr-fish-castorani.csv,0BxUZSA1Gn1HZV3BuelZVN1NRUnc,MCR-fish,MCR,Castorani,Max,in prep - Nina,knb-lter-mcr.6.54,http://dx.doi.org/10.6073/pasta/d688610e536f54885a3c59d287f6c4c3,6/8/2017,5/9/2016,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-mcr.6.54,macro,active,mobile,consumers,marine,fish,2006,10,10,6,376,fish
mcr-inverts-castorani,L3-mcr-inverts-castorani.csv,0BxUZSA1Gn1HZTnYzZVdwM3hyN2M,MCR-inverts,MCR,Castorani,Max,in prep - Nina,knb-lter-mcr.7.28,http://dx.doi.org/10.6073/pasta/8e7b3a0c7a8bf315739921861cc79d10,6/8/2017,3/30/2015,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-mcr.7.28,macro,active,mobile,consumers,marine,invertebrates,2005,11,11,6,13,inverts
mcr-algae-castorani,L3-mcr-algae-castorani.csv,0BxUZSA1Gn1HZenhxaVJ6bWtVdDg,MCR-algae,MCR,Castorani,Max,in prep - Nina,knb-lter-mcr.8.28,http://dx.doi.org/10.6073/pasta/79a6edbcf3aa2380d43deed778856416,6/8/2017,10/23/2015,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-mcr.8.28,macro,passive,sessile,primary producers,marine,algae,2006,10,10,6,73,algae
mcr-coral-castorani,L3-mcr-coral-castorani.csv,0BxUZSA1Gn1HZZGR2VjdMbmU3Mm8,MCR-coral,MCR,Castorani,Max,in prep - Nina,knb-lter-mcr.4.33,http://dx.doi.org/10.6073/pasta/1f05f1f52a2759dc096da9c24e88b1e8,6/8/2017,12/9/2015,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-mcr.4.33,macro,passive,sessile,consumers,marine,coral,2005,11,11,6,31,coral
ntl-zooplankton-stanleyLottig,L3-ntl-zooplankton-stanleyLottig.csv,0B2P104M94skvcUl6eGhhSDhtaDA,NTL-Trout-Lake-zooplankton,NTL,Stanley,Nina,let's talk,knb-lter-ntl.37.14,http://dx.doi.org/10.6073/pasta/c866e3663bae76388f63233a5fdfb3d4,6/8/2017,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-ntl.37.14,micro,active,mobile,consumers,freshwater,zooplankton,1982,34,34,7,143,zooplankton
usvi-coral-castorani,L3-usvi-coral-castorani.csv,0BxUZSA1Gn1HZZGowdUVCTTdtXzg,CSUN-USVI-coral,USVI,Castorani,Max,complete,edi.291.1,https://doi.org/10.6073/pasta/8cd311eae47675f714717fe78c737634,5/8/2017,1/23/2019,https://portal.edirepository.org/nis/mapbrowse?packageid=edi.291.1,macro,passive,sessile,primary producers,marine,coral,1992,24,24,6,34,coral


_MEMBER_WS_c1_which_mclass____4___1_,_LogP_WS_c1_which_mclass____4___1_,GO,Description,_PATTERN_,_RANK_,CHILD_GO_WS_c1_which_mclass____4___1_
1,-12.024366363087143,GO:0051179,localization,M1,1,GO:0046907 intracellular transport
1,-5.624671228270232,GO:0008152,metabolic process,M1,1,GO:0006397 mRNA processing
1,-4.730042103559538,GO:0002376,immune system process,M1,1,GO:0002376 immune system process
1,-4.574149609364033,GO:0050896,response to stimulus,M1,1,GO:0042493 response to drug
1,-4.434448126332572,GO:0071840,cellular component organization or biogenesis,M1,1,GO:0016050 vesicle organization
1,-4.103194457318683,GO:0048519,negative regulation of biological process,M1,1,GO:0010629 negative regulation of gene expression
1,-3.717900597518159,GO:0032501,multicellular organismal process,M1,1,GO:2000037 regulation of stomatal complex patterning
1,-3.5783077742940863,GO:0050789,regulation of biological process,M1,1,GO:0080134 regulation of response to stress
1,-3.438656083995893,GO:0022414,reproductive process,M1,1,GO:0010228 vegetative to reproductive phase transition of meristem
1,-3.0503368912783513,GO:0051704,multi-organism process,M1,1,GO:0009294 DNA mediated transformation
1,-2.730303697221089,GO:0032502,developmental process,M1,1,GO:0050793 regulation of developmental process
1,-2.642622586696263,GO:0048518,positive regulation of biological process,M1,1,GO:1902751 positive regulation of cell cycle G2/M phase transition
1,-2.4235372542631834,GO:0023052,signaling,M1,1,GO:0035556 intracellular signal transduction
1,-2.3725346575442483,GO:0040007,growth,M1,1,GO:0010449 root meristem growth
1,-2.345699356041886,GO:0009987,cellular process,M1,1,GO:0008219 cell death
1,-2.2753400508819444,GO:0065007,biological regulation,M1,1,GO:0042446 hormone biosynthetic process


sample,Assay Type,AvgSpotLen,Bases,BioProject,BioSample,Bytes,Center Name,Consent,DATASTORE filetype,DATASTORE provider,DATASTORE region,clinical_information,Experiment,GEO_Accession (exp),gestational_age,Instrument,LibraryLayout,LibrarySelection,LibrarySource,Organism,Platform,ReleaseDate,Sample Name,source_name,SRA Study
SRR10916911,RNA-Seq,300,5851500900,PRJNA602315,SAMN13888095,2510035848,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",preeclampsia,SRX7584224,GSM4277245,38.2,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277245,placenta,SRP243468
SRR10916912,RNA-Seq,300,6033315900,PRJNA602315,SAMN13888094,2603962819,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",preeclampsia,SRX7584225,GSM4277246,37.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277246,placenta,SRP243468
SRR10916913,RNA-Seq,300,5837922300,PRJNA602315,SAMN13888093,2532024065,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",preeclampsia,SRX7584226,GSM4277247,37.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277247,placenta,SRP243468
SRR10916914,RNA-Seq,300,5384850600,PRJNA602315,SAMN13888092,2333085166,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",preeclampsia,SRX7584227,GSM4277248,38.4,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277248,placenta,SRP243468
SRR10916915,RNA-Seq,300,5875015500,PRJNA602315,SAMN13888091,2528549701,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",control,SRX7584228,GSM4277249,37.6,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277249,placenta,SRP243468
SRR10916916,RNA-Seq,300,5094186900,PRJNA602315,SAMN13888090,2203909044,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",control,SRX7584229,GSM4277250,38.2,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277250,placenta,SRP243468
SRR10916917,RNA-Seq,300,6618529800,PRJNA602315,SAMN13888089,2860990328,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",control,SRX7584230,GSM4277251,38.4,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277251,placenta,SRP243468
SRR10916918,RNA-Seq,300,5810447100,PRJNA602315,SAMN13888088,2535489561,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",control,SRX7584231,GSM4277252,38.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277252,placenta,SRP243468
SRR11498039,RNA-Seq,250,6707344500,PRJNA623568,SAMN14549361,2548800844,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073870,GSM4458410,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458410,Placenta,SRP255609
SRR11498040,RNA-Seq,250,5228652000,PRJNA623568,SAMN14549360,2030883717,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073871,GSM4458411,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458411,Placenta,SRP255609
SRR11498041,RNA-Seq,250,5841145500,PRJNA623568,SAMN14549359,2060468456,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073872,GSM4458412,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458412,Placenta,SRP255609
SRR11498042,RNA-Seq,250,6134030000,PRJNA623568,SAMN14549358,2156037998,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073873,GSM4458413,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458413,Placenta,SRP255609
SRR11498043,RNA-Seq,250,5857029000,PRJNA623568,SAMN14549357,2215784380,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073874,GSM4458414,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458414,Placenta,SRP255609
SRR11498044,RNA-Seq,250,8260164000,PRJNA623568,SAMN14549356,2899528981,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073875,GSM4458415,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458415,Placenta,SRP255609
SRR11498045,RNA-Seq,250,5756372750,PRJNA623568,SAMN14549355,2146283280,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073876,GSM4458416,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458416,Placenta,SRP255609
SRR11498046,RNA-Seq,250,8774353750,PRJNA623568,SAMN14549354,3307261673,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073877,GSM4458417,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458417,Placenta,SRP255609
SRR11498047,RNA-Seq,250,7575094250,PRJNA623568,SAMN14549353,2946094556,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073878,GSM4458418,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458418,Placenta,SRP255609
SRR11498048,RNA-Seq,250,6315704250,PRJNA623568,SAMN14549352,2388050889,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073879,GSM4458419,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458419,Placenta,SRP255609
SRR11498049,RNA-Seq,250,5234651000,PRJNA623568,SAMN14549351,2145819426,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073880,GSM4458420,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458420,Placenta,SRP255609
SRR11498050,RNA-Seq,250,5441768500,PRJNA623568,SAMN14549350,1912215837,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073881,GSM4458421,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458421,Placenta,SRP255609
SRR11498051,RNA-Seq,250,5248079500,PRJNA623568,SAMN14549349,1847537049,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073882,GSM4458422,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458422,Placenta,SRP255609
SRR11498052,RNA-Seq,250,5213271250,PRJNA623568,SAMN14549348,1859924155,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073883,GSM4458423,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458423,Placenta,SRP255609
SRR11498053,RNA-Seq,250,5175471250,PRJNA623568,SAMN14549347,1840323120,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073884,GSM4458424,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458424,Placenta,SRP255609
SRR11498054,RNA-Seq,250,5430952000,PRJNA623568,SAMN14549342,1911059637,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073885,GSM4458425,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458425,Placenta,SRP255609
SRR11498055,RNA-Seq,250,6592196750,PRJNA623568,SAMN14549341,2511179244,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073886,GSM4458426,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458426,Placenta,SRP255609
SRR11498056,RNA-Seq,250,7224091250,PRJNA623568,SAMN14549340,2705017283,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073887,GSM4458427,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458427,Placenta,SRP255609
SRR11498057,RNA-Seq,250,6361553750,PRJNA623568,SAMN14549346,2386401940,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073888,GSM4458428,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458428,Placenta,SRP255609
SRR11498058,RNA-Seq,250,5969768500,PRJNA623568,SAMN14549345,2218972389,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073889,GSM4458429,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458429,Placenta,SRP255609
SRR11498059,RNA-Seq,250,5862383500,PRJNA623568,SAMN14549344,2176535488,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073890,GSM4458430,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458430,Placenta,SRP255609
SRR11498060,RNA-Seq,250,5819301500,PRJNA623568,SAMN14549343,2191984914,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073891,GSM4458431,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458431,Placenta,SRP255609
SRR11498061,RNA-Seq,250,5334998000,PRJNA623568,SAMN14549339,2020553197,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073892,GSM4458432,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458432,Placenta,SRP255609
SRR11498062,RNA-Seq,250,7016941250,PRJNA623568,SAMN14549338,2624634563,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073893,GSM4458433,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458433,Placenta,SRP255609
SRR11498063,RNA-Seq,250,6992219750,PRJNA623568,SAMN14549337,2679010079,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073894,GSM4458434,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458434,Placenta,SRP255609
SRR11498064,RNA-Seq,250,8406434750,PRJNA623568,SAMN14549336,3274479182,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073895,GSM4458435,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458435,Placenta,SRP255609
SRR11498065,RNA-Seq,250,6372816000,PRJNA623568,SAMN14549335,2308349042,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073896,GSM4458436,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458436,Placenta,SRP255609
SRR11498066,RNA-Seq,250,5721086500,PRJNA623568,SAMN14549334,2081096448,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073897,GSM4458437,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458437,Placenta,SRP255609
SRR11498067,RNA-Seq,250,6320706250,PRJNA623568,SAMN14549333,2309138769,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073898,GSM4458438,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458438,Placenta,SRP255609
SRR11498068,RNA-Seq,250,6129292000,PRJNA623568,SAMN14549332,2223234786,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073899,GSM4458439,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458439,Placenta,SRP255609
SRR11498069,RNA-Seq,250,7914199250,PRJNA623568,SAMN14549331,2985305823,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073900,GSM4458440,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458440,Placenta,SRP255609
SRR11498070,RNA-Seq,250,10292518250,PRJNA623568,SAMN14549330,3881011504,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073901,GSM4458441,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458441,Placenta,SRP255609
SRR11498071,RNA-Seq,250,5258229500,PRJNA623568,SAMN14549412,1979383915,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073902,GSM4458442,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458442,Placenta,SRP255609
SRR11498072,RNA-Seq,250,5573051750,PRJNA623568,SAMN14549411,2036568739,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073903,GSM4458443,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458443,Placenta,SRP255609
SRR11498073,RNA-Seq,250,5084821500,PRJNA623568,SAMN14549410,1871457545,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073904,GSM4458444,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458444,Placenta,SRP255609
SRR11498074,RNA-Seq,250,6162808500,PRJNA623568,SAMN14549409,2276896798,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073905,GSM4458445,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458445,Placenta,SRP255609
SRR11498075,RNA-Seq,250,6505293000,PRJNA623568,SAMN14549408,2407887150,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073906,GSM4458446,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458446,Placenta,SRP255609
SRR11498076,RNA-Seq,250,6345172250,PRJNA623568,SAMN14549407,2369771884,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073907,GSM4458447,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458447,Placenta,SRP255609
SRR11498077,RNA-Seq,250,5411214250,PRJNA623568,SAMN14549406,2006719456,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073908,GSM4458448,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458448,Placenta,SRP255609
SRR11498078,RNA-Seq,250,6276562500,PRJNA623568,SAMN14549405,2407767646,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073909,GSM4458449,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458449,Placenta,SRP255609
SRR11498079,RNA-Seq,250,7387090250,PRJNA623568,SAMN14549404,2781772751,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073910,GSM4458450,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458450,Placenta,SRP255609
SRR11498080,RNA-Seq,250,4819523750,PRJNA623568,SAMN14549403,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073911,GSM4458451,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458451,Umbilical Cord Blood,SRP255609
SRR11498081,RNA-Seq,250,5463258500,PRJNA623568,SAMN14549402,2171917895,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073912,GSM4458452,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458452,Umbilical Cord Blood,SRP255609


Run,Assay Type,AvgSpotLen,Bases,BioProject,BioSample,Bytes,Cell_type,Center Name,Consent,DATASTORE filetype,DATASTORE provider,DATASTORE region,Experiment,GEO_Accession (exp),Instrument,LibraryLayout,LibrarySelection,LibrarySource,Organism,Platform,ReleaseDate,replicate,Sample Name,source_name,SRA Study,time,treatment,batch
SRR8843729,RNA-Seq,101,1527502992,PRJNA530759,SAMN11333480,968955894,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631513,GSM3704124,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704124,T_20min,SRP190499,20 min,insulin,1
SRR8843730,RNA-Seq,101,1444145672,PRJNA530759,SAMN11333479,920488633,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631514,GSM3704125,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704125,T_40min,SRP190499,40 min,insulin,1
SRR8843731,RNA-Seq,101,2018446115,PRJNA530759,SAMN11333478,1253953835,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631515,GSM3704126,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704126,T_60min,SRP190499,60 min,insulin,1
SRR8843733,RNA-Seq,101,1953746323,PRJNA530759,SAMN11333565,1215370944,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631517,GSM3704128,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704128,T_100min,SRP190499,100 min,insulin,1
SRR8843734,RNA-Seq,101,1931925172,PRJNA530759,SAMN11333564,1200689822,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631518,GSM3704129,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704129,T_120min,SRP190499,120 min,insulin,1
SRR8843735,RNA-Seq,101,1657134169,PRJNA530759,SAMN11333477,1028278619,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631519,GSM3704130,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704130,T_140min,SRP190499,140 min,insulin,1
SRR8843736,RNA-Seq,101,1792808883,PRJNA530759,SAMN11333503,1113211143,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631520,GSM3704131,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704131,T_160min,SRP190499,160 min,insulin,1
SRR8843737,RNA-Seq,101,1447588257,PRJNA530759,SAMN11333502,899343588,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631521,GSM3704132,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704132,T_180min,SRP190499,180 min,insulin,1
SRR8843738,RNA-Seq,101,1150039429,PRJNA530759,SAMN11333501,716258073,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631522,GSM3704133,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704133,T_0min,SRP190499,baseline control,baseline control,2
SRR8843739,RNA-Seq,101,1647020231,PRJNA530759,SAMN11333500,1022975014,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631523,GSM3704134,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704134,T_20min,SRP190499,20 min,insulin,2
SRR8843740,RNA-Seq,101,1791694954,PRJNA530759,SAMN11333499,1082726879,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631524,GSM3704135,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704135,T_40min,SRP190499,40 min,insulin,2
SRR8843741,RNA-Seq,101,1783021680,PRJNA530759,SAMN11333498,1080125871,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631525,GSM3704136,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704136,T_60min,SRP190499,60 min,insulin,2
SRR8843742,RNA-Seq,101,1910598921,PRJNA530759,SAMN11333497,1154996254,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631526,GSM3704137,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704137,T_80min,SRP190499,80 min,insulin,2
SRR8843743,RNA-Seq,101,1586710101,PRJNA530759,SAMN11333496,967199621,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631527,GSM3704138,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704138,T_100min,SRP190499,100 min,insulin,2
SRR8843744,RNA-Seq,101,1912736283,PRJNA530759,SAMN11333495,1163131438,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631528,GSM3704139,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704139,T_120min,SRP190499,120 min,insulin,2
SRR8843745,RNA-Seq,101,1455695628,PRJNA530759,SAMN11333494,881619667,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631529,GSM3704140,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704140,T_140min,SRP190499,140 min,insulin,2
SRR8843746,RNA-Seq,101,1502075737,PRJNA530759,SAMN11333493,913107489,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631530,GSM3704141,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704141,T_160min,SRP190499,160 min,insulin,2
SRR8843747,RNA-Seq,101,1439708439,PRJNA530759,SAMN11333492,874044595,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631531,GSM3704142,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704142,T_180min,SRP190499,180 min,insulin,2
SRR8843748,RNA-Seq,101,1965035699,PRJNA530759,SAMN11333491,1191711313,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631532,GSM3704143,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704143,T_0min,SRP190499,baseline control,baseline control,3
SRR8843749,RNA-Seq,101,2046721166,PRJNA530759,SAMN11333490,1260097480,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631533,GSM3704144,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704144,T_20min,SRP190499,20 min,insulin,3
SRR8843750,RNA-Seq,101,794382776,PRJNA530759,SAMN11333489,488089200,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631534,GSM3704145,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704145,T_40min,SRP190499,40 min,insulin,3
SRR8843751,RNA-Seq,101,2684188928,PRJNA530759,SAMN11333488,1646906677,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631535,GSM3704146,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704146,T_60min,SRP190499,60 min,insulin,3
SRR8843752,RNA-Seq,101,1445734402,PRJNA530759,SAMN11333487,890910675,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631536,GSM3704147,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704147,T_80min,SRP190499,80 min,insulin,3
SRR8843753,RNA-Seq,101,1270323763,PRJNA530759,SAMN11333486,783063407,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631537,GSM3704148,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704148,T_100min,SRP190499,100 min,insulin,3
SRR8843754,RNA-Seq,101,1872644636,PRJNA530759,SAMN11333485,1158950467,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631538,GSM3704149,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704149,T_120min,SRP190499,120 min,insulin,3
SRR8843755,RNA-Seq,101,1946777424,PRJNA530759,SAMN11333484,1197007297,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631509,GSM3704150,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704150,T_140min,SRP190499,140 min,insulin,3
SRR8843756,RNA-Seq,101,1845303734,PRJNA530759,SAMN11333483,1135585190,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631510,GSM3704151,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704151,T_160min,SRP190499,160 min,insulin,3
SRR8843757,RNA-Seq,101,1396510335,PRJNA530759,SAMN11333482,861313088,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631511,GSM3704152,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704152,T_180min,SRP190499,180 min,insulin,3
SRR8844339,RNA-Seq,101,1339853981,PRJNA530759,SAMN11333481,849811585,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631512,GSM3704123,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704123,T_0min,SRP190499,baseline control,baseline control,1
SRR8843732,RNA-Seq,101,2024965665,PRJNA530759,SAMN11333566,1256792410,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631516,GSM3704127,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704127,T_80min,SRP190499,80 min,insulin,1

"ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","geneID","Count"
"GO:0002429","immune response-activating cell surface receptor signaling pathway","36/178","473/18670",2.09762632839356e-22,5.84188932457607e-19,4.89961349758454e-19,"HLA-DRA/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1/EZR/CD79A/IGHM/PTPRC/ELF1/MEF2C/TRBC2/NCR3/LYN/IGHG2/IGKV3-20/PDE4B/IGHV4-34/THEMIS2/PRNP/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",36
"GO:0002455","humoral immune response mediated by circulating immunoglobulin","22/178","150/18670",4.30534019475928e-20,5.9951862212023e-17,5.02818415377413e-17,"HLA-DQB1/CD55/IGHM/PTPRC/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",22
"GO:0002460","adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","30/178","361/18670",8.11957171444694e-20,7.53766907491158e-17,6.32187004714308e-17,"HLA-B/HLA-DQB1/CD74/HLA-C/B2M/HLA-E/CD55/LY9/IGHM/PTPRC/MEF2C/TRBC2/HLA-F/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",30
"GO:0002449","lymphocyte mediated immunity","29/178","352/18670",4.49606427191979e-19,3.13038474932415e-16,2.62546489983948e-16,"HLA-B/HLA-DQB1/CD74/HLA-C/B2M/HLA-E/CD55/IGHM/PTPRC/TRBC2/HLA-F/NCR3/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",29
"GO:0016064","immunoglobulin mediated immune response","24/178","218/18670",7.76630281120399e-19,4.32583066584062e-16,3.62808967117087e-16,"HLA-DQB1/CD74/HLA-E/CD55/IGHM/PTPRC/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",24
"GO:0019724","B cell mediated immunity","24/178","221/18670",1.07217983548647e-18,4.97670140304968e-16,4.17397728937626e-16,"HLA-DQB1/CD74/HLA-E/CD55/IGHM/PTPRC/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",24
"GO:0006958","complement activation, classical pathway","20/178","137/18670",2.57757133164006e-18,1.0255051655168e-15,8.60094854873578e-16,"CD55/IGHM/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",20
"GO:0050851","antigen receptor-mediated signaling pathway","27/178","316/18670",3.26829778379737e-18,1.13777616598446e-15,9.54256945032417e-16,"HLA-DRA/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1/EZR/CD79A/IGHM/PTPRC/ELF1/MEF2C/TRBC2/LYN/IGHG2/PDE4B/IGHV4-34/THEMIS2/PRNP/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",27
"GO:0006909","phagocytosis","28/178","369/18670",1.68884105658854e-17,5.2260248251101e-15,4.38308573633915e-15,"IGHM/PTPRC/TRBC2/IL2RG/RAB31/LYN/PLD4/IGHG2/NCF4/IGKV3-20/ITGB2/IGHV4-34/ITGB1/MYH9/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",28
"GO:0006956","complement activation","20/178","175/18670",3.51816171526709e-16,9.79808037701883e-14,8.21768510123965e-14,"CD55/IGHM/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",20
"GO:0002920","regulation of humoral immune response","18/178","134/18670",6.2398900584657e-16,1.49453335159135e-13,1.25347047422515e-13,"CD55/PTPRC/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0050900","leukocyte migration","30/178","499/18670",6.43964101224279e-16,1.49453335159135e-13,1.25347047422515e-13,"CD74/DUSP1/CXCR4/GPR183/IGHM/GPSM3/CD99/SELL/SELENOK/LYN/IGKV3-20/PDE4B/ITGB2/ITGA4/IGHV4-34/ITGB1/MYH9/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",30
"GO:0030449","regulation of complement activation","17/178","115/18670",7.94677425130764e-16,1.70244356076091e-13,1.42784551122685e-13,"CD55/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",17
"GO:2000257","regulation of protein activation cascade","17/178","116/18670",9.23528732527124e-16,1.8371625143486e-13,1.54083478005841e-13,"CD55/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",17
"GO:0002433","immune response-regulating cell surface receptor signaling pathway involved in phagocytosis","18/178","139/18670",1.21145397214055e-15,2.10868707025714e-13,1.76856339748676e-13,"PTPRC/LYN/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0038096","Fc-gamma receptor signaling pathway involved in phagocytosis","18/178","139/18670",1.21145397214055e-15,2.10868707025714e-13,1.76856339748676e-13,"PTPRC/LYN/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0038094","Fc-gamma receptor signaling pathway","18/178","142/18670",1.78069385887148e-15,2.91719552762181e-13,2.44666233612125e-13,"PTPRC/LYN/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0002431","Fc receptor mediated stimulatory signaling pathway","18/178","145/18670",2.59360698997922e-15,4.01288637060674e-13,3.36562217003737e-13,"PTPRC/LYN/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0072376","protein activation cascade","20/178","198/18670",3.94863780650285e-15,5.78787173216338e-13,4.8543087493794e-13,"CD55/IGHM/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",20
"GO:0002697","regulation of immune effector process","28/178","458/18670",4.35785548881237e-15,6.06831376817123e-13,5.08951648930245e-13,"HLA-B/CD74/HLA-C/B2M/HLA-E/CD55/PTPRC/HLA-F/NCR3/SELENOK/LYN/IGHG2/IGKV3-20/ITGB2/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",28
"GO:0006959","humoral immune response","25/178","356/18670",6.24583832473035e-15,8.28317130208287e-13,6.94712543487551e-13,"HLA-DQB1/HLA-E/CD55/GPR183/IGHM/PTPRC/MEF2C/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",25
"GO:0070613","regulation of protein processing","19/178","180/18670",8.81863309514318e-15,1.11635878045335e-12,9.36294107087211e-13,"CD55/IGHG2/IGKV3-20/IGHV4-34/MYH9/PRNP/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",19
"GO:1903317","regulation of protein maturation","19/178","182/18670",1.08231074219819e-14,1.31053713783564e-12,1.09915219081821e-12,"CD55/IGHG2/IGKV3-20/IGHV4-34/MYH9/PRNP/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",19
"GO:0002673","regulation of acute inflammatory response","18/178","159/18670",1.34395802652467e-14,1.5216879853283e-12,1.27624516278692e-12,"HLA-E/CD55/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0051251","positive regulation of lymphocyte activation","24/178","334/18670",1.36596767085126e-14,1.5216879853283e-12,1.27624516278692e-12,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/IGHM/PTPRC/CD24/MEF2C/MAP3K8/TRBC2/HLA-F/SELENOK/LYN/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",24
"GO:0051249","regulation of lymphocyte activation","28/178","485/18670",1.83407931504078e-14,1.96458111245714e-12,1.64770121460546e-12,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/BANK1/ZFP36L2/GPR183/IGHM/PTPRC/CD24/MEF2C/MAP3K8/TRBC2/HLA-F/SELENOK/LYN/IGHG2/IGHV4-34/PRNP/IGHV3-30/IGHV4-59/IRF1/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",28
"GO:0002696","positive regulation of leukocyte activation","25/178","380/18670",2.78262694717331e-14,2.87022816588061e-12,2.40727064162868e-12,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/IGHM/PTPRC/CD24/MEF2C/MAP3K8/TRBC2/HLA-F/SELENOK/LYN/IGHG2/ITGB2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",25
"GO:0006898","receptor-mediated endocytosis","23/178","316/18670",3.84591689713686e-14,3.79046153671662e-12,3.17907366530253e-12,"B2M/EZR/SNX9/RAB31/SDCBP/IGKV3-20/ITGB2/ITGA4/IGHV4-34/ITGB1/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",23
"GO:0038095","Fc-epsilon receptor signaling pathway","18/178","169/18670",3.94697969711964e-14,3.79046153671662e-12,3.17907366530253e-12,"CALM1/FOS/LYN/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0050867","positive regulation of cell activation","25/178","394/18670",6.3263151841161e-14,5.87292926258778e-12,4.92564680475566e-12,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/IGHM/PTPRC/CD24/MEF2C/MAP3K8/TRBC2/HLA-F/SELENOK/LYN/IGHG2/ITGB2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",25
"GO:0050853","B cell receptor signaling pathway","16/178","129/18670",9.8600541463007e-14,8.85814541853143e-12,7.42935828544694e-12,"CD79A/IGHM/PTPRC/ELF1/MEF2C/TRBC2/LYN/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",16
"GO:0038093","Fc receptor signaling pathway","20/178","241/18670",1.69972803537158e-13,1.473336154551e-11,1.2356923091557e-11,"CALM1/FOS/PTPRC/LYN/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",20
"GO:0050864","regulation of B cell activation","18/178","184/18670",1.74578431239437e-13,1.473336154551e-11,1.2356923091557e-11,"CD74/BANK1/ZFP36L2/GPR183/IGHM/PTPRC/MEF2C/TRBC2/LYN/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",18
"GO:0042113","B cell activation","22/178","310/18670",2.39622132584689e-13,1.96278717425988e-11,1.64619663221494e-11,"CD74/KLF6/BANK1/ZFP36L2/CD79A/GPR183/IGHM/PTPRC/MEF2C/TRBC2/LYN/IGHG2/ITGA4/IGHV4-34/ITGB1/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",22
"GO:0099024","plasma membrane invagination","15/178","127/18670",1.24357710138096e-12,9.89532064955991e-11,8.29924086605818e-11,"IGHM/SNX9/TRBC2/RAB31/IGHG2/ITGB2/IGHV4-34/MYH9/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",15
"GO:0010324","membrane invagination","15/178","135/18670",3.0689175131054e-12,2.37414868722182e-10,1.9912070063102e-10,"IGHM/SNX9/TRBC2/RAB31/IGHG2/ITGB2/IGHV4-34/MYH9/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",15
"GO:0060333","interferon-gamma-mediated signaling pathway","13/178","91/18670",3.4734018994747e-12,2.61443899730731e-10,2.1927393499102e-10,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/HLA-F/IRF1",13
"GO:0002526","acute inflammatory response","18/178","220/18670",3.74506196430366e-12,2.74473620278571e-10,2.30202008276727e-10,"HLA-E/CD55/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0050871","positive regulation of B cell activation","15/178","142/18670",6.44411461688527e-12,4.60175877128859e-10,3.85951156136799e-10,"CD74/GPR183/IGHM/PTPRC/MEF2C/TRBC2/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",15
"GO:0006911","phagocytosis, engulfment","14/178","118/18670",6.74900259462024e-12,4.69899305650434e-10,3.94106230459535e-10,"IGHM/TRBC2/RAB31/IGHG2/ITGB2/IGHV4-34/MYH9/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",14
"GO:0002478","antigen processing and presentation of exogenous peptide antigen","16/178","175/18670",1.15574701921505e-11,7.85062304515586e-10,6.58434566274245e-10,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",16
"GO:0019884","antigen processing and presentation of exogenous antigen","16/178","182/18670",2.1015008142397e-11,1.39349518277561e-09,1.16872940019997e-09,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",16
"GO:0048002","antigen processing and presentation of peptide antigen","16/178","189/18670",3.72373768601258e-11,2.41176964082443e-09,2.02275983482544e-09,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",16
"GO:0050727","regulation of inflammatory response","24/178","485/18670",4.07505131325101e-11,2.57932225168274e-09,2.16328680959426e-09,"HLA-E/CD55/TMSB4X/GPSM3/PTPRC/ACP5/LYN/PER1/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",24
"GO:0034341","response to interferon-gamma","16/178","199/18670",8.09309654729286e-11,5.00872752982458e-09,4.20083771659482e-09,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/VIM/IFITM2/IFITM1/HLA-F/IRF1",16
"GO:0016485","protein processing","19/178","328/18670",3.69265313092012e-10,2.23566064556794e-08,1.87505658981962e-08,"CD55/IGHG2/IGKV3-20/IGHV4-34/MYH9/PRNP/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",19
"GO:0006910","phagocytosis, recognition","11/178","84/18670",4.40788258414128e-10,2.61190489294329e-08,2.19061398750493e-08,"IGHM/TRBC2/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",11
"GO:0019882","antigen processing and presentation","16/178","226/18670",5.35185949953676e-10,3.10519348046039e-08,2.60433689242809e-08,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",16
"GO:0019883","antigen processing and presentation of endogenous antigen","7/178","22/18670",9.61556394636683e-10,5.46517256951666e-08,4.58365980601246e-08,"HLA-B/CD74/HLA-C/B2M/HLA-E/TAP1/HLA-F",7
"GO:0071346","cellular response to interferon-gamma","14/178","180/18670",1.98506274276139e-09,1.10567994771809e-07,9.27337731828952e-08,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/VIM/HLA-F/IRF1",14
"GO:0002483","antigen processing and presentation of endogenous peptide antigen","6/178","15/18670",3.2169477891551e-09,1.7229229986148e-07,1.44502168909619e-07,"HLA-B/HLA-C/B2M/HLA-E/TAP1/HLA-F",6
"GO:0019885","antigen processing and presentation of endogenous peptide antigen via MHC class I","6/178","15/18670",3.2169477891551e-09,1.7229229986148e-07,1.44502168909619e-07,"HLA-B/HLA-C/B2M/HLA-E/TAP1/HLA-F",6
"GO:0043312","neutrophil degranulation","21/178","485/18670",7.93771036215784e-09,4.17104214313388e-07,3.49826798284573e-07,"B2M/FTH1/CD55/YPEL5/SLC2A3/RNASET2/ADGRE5/COTL1/PTPRC/SELL/GMFG/CMTM6/PLAC8/ALOX5/RAB31/SDCBP/SYNGR1/GLIPR1/ITGB2/CYBB/HSPA1A",21
"GO:0051604","protein maturation","19/178","397/18670",8.66021771809104e-09,4.46642710090436e-07,3.74600840476492e-07,"CD55/IGHG2/IGKV3-20/IGHV4-34/MYH9/PRNP/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",19
"GO:0002283","neutrophil activation involved in immune response","21/178","488/18670",8.84012114010395e-09,4.47631588639809e-07,3.75430216457237e-07,"B2M/FTH1/CD55/YPEL5/SLC2A3/RNASET2/ADGRE5/COTL1/PTPRC/SELL/GMFG/CMTM6/PLAC8/ALOX5/RAB31/SDCBP/SYNGR1/GLIPR1/ITGB2/CYBB/HSPA1A",21
"GO:0042119","neutrophil activation","21/178","498/18670",1.25822304170994e-08,6.25741280564677e-07,5.24811452923752e-07,"B2M/FTH1/CD55/YPEL5/SLC2A3/RNASET2/ADGRE5/COTL1/PTPRC/SELL/GMFG/CMTM6/PLAC8/ALOX5/RAB31/SDCBP/SYNGR1/GLIPR1/ITGB2/CYBB/HSPA1A",21
"GO:0002446","neutrophil mediated immunity","21/178","499/18670",1.30278780427689e-08,6.36537549984413e-07,5.33866322749848e-07,"B2M/FTH1/CD55/YPEL5/SLC2A3/RNASET2/ADGRE5/COTL1/PTPRC/SELL/GMFG/CMTM6/PLAC8/ALOX5/RAB31/SDCBP/SYNGR1/GLIPR1/ITGB2/CYBB/HSPA1A",21
"GO:0008037","cell recognition","14/178","215/18670",1.95041491465852e-08,9.36535437469653e-07,7.85475625340701e-07,"YWHAZ/CXCR4/IGHM/TRBC2/NCR3/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",14
"GO:0007159","leukocyte cell-cell adhesion","17/178","337/18670",2.55299055388272e-08,1.20509808348532e-06,1.01072007833466e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/EZR/PTPRC/CD24/SELL/MAP3K8/SELENOK/LYN/ITGB2/ITGA4/ITGB1/PRNP/IRF1",17
"GO:0046651","lymphocyte proliferation","15/178","272/18670",5.49082662613507e-08,2.5486586922977e-06,2.13756917252522e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/CD79A/GPR183/PTPRC/CD24/MEF2C/CCND3/SELENOK/LYN/PRNP/IRF1",15
"GO:0032943","mononuclear cell proliferation","15/178","274/18670",6.04592048867576e-08,2.7603096001577e-06,2.31508154691484e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/CD79A/GPR183/PTPRC/CD24/MEF2C/CCND3/SELENOK/LYN/PRNP/IRF1",15
"GO:0050852","T cell receptor signaling pathway","13/178","202/18670",7.31750666109516e-08,3.28697678244355e-06,2.75679919880648e-06,"HLA-DRA/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1/EZR/PTPRC/ELF1/PDE4B/THEMIS2/PRNP",13
"GO:0070665","positive regulation of leukocyte proliferation","11/178","139/18670",9.42873738713476e-08,4.1681005751064e-06,3.49580087920669e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK/LYN",11
"GO:0050670","regulation of lymphocyte proliferation","13/178","208/18670",1.03077639897913e-07,4.48548792368264e-06,3.76199478508996e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK/LYN/PRNP/IRF1",13
"GO:0002440","production of molecular mediator of immune response","15/178","286/18670",1.05903859061828e-07,4.53757303826447e-06,3.80567875721775e-06,"HLA-DQB1/CD74/B2M/HLA-E/CD55/PTPRC/HLA-F/IGKV3-20/IGLV2-14/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGLV1-51/IGLV1-44",15
"GO:0032944","regulation of mononuclear cell proliferation","13/178","209/18670",1.09011359711922e-07,4.59994904238943e-06,3.85799373525924e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK/LYN/PRNP/IRF1",13
"GO:0001916","positive regulation of T cell mediated cytotoxicity","6/178","26/18670",1.35637761702329e-07,5.63807710956697e-06,4.72867546296101e-06,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0070661","leukocyte proliferation","15/178","298/18670",1.80420658912854e-07,7.38928728047498e-06,6.19742170476197e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/CD79A/GPR183/PTPRC/CD24/MEF2C/CCND3/SELENOK/LYN/PRNP/IRF1",15
"GO:0070663","regulation of leukocyte proliferation","13/178","222/18670",2.19511459904911e-07,8.85999153384313e-06,7.4309066289702e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK/LYN/PRNP/IRF1",13
"GO:0002475","antigen processing and presentation via MHC class Ib","5/178","16/18670",2.98729269883961e-07,1.18851573803833e-05,9.96812405823321e-06,"HLA-B/HLA-C/B2M/HLA-E/HLA-F",5
"GO:0050671","positive regulation of lymphocyte proliferation","10/178","130/18670",4.78448469941626e-07,1.87673097012314e-05,1.57402098561967e-05,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK",10
"GO:0042110","T cell activation","18/178","464/18670",5.02287188291959e-07,1.94287474915709e-05,1.62949600997055e-05,"CD74/HLA-DPB1/HLA-DPA1/B2M/HLA-E/CD55/LY9/ZFP36L2/GPR183/PTPRC/CD24/MAP3K8/CCND3/SELENOK/LYN/MYH9/PRNP/IRF1",18
"GO:0032946","positive regulation of mononuclear cell proliferation","10/178","131/18670",5.13763056039294e-07,1.96004124804032e-05,1.64389361406084e-05,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK",10
"GO:0002479","antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent","8/178","75/18670",5.70927711506173e-07,2.14869415749283e-05,1.80211748482532e-05,"HLA-B/HLA-C/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",8
"GO:0001914","regulation of T cell mediated cytotoxicity","6/178","33/18670",6.17373634152896e-07,2.29251409482109e-05,1.92273978131267e-05,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0042742","defense response to bacterium","15/178","330/18670",6.62715257977075e-07,2.42850262298178e-05,2.03679384688522e-05,"HLA-E/IGHM/ACP5/TRBC2/PLAC8/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",15
"GO:0042590","antigen processing and presentation of exogenous peptide antigen via MHC class I","8/178","79/18670",8.54725550894041e-07,3.09144241459728e-05,2.59280382424317e-05,"HLA-B/HLA-C/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",8
"GO:0001912","positive regulation of leukocyte mediated cytotoxicity","7/178","56/18670",9.95243008592151e-07,3.55352792170403e-05,2.98035659388122e-05,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:1903039","positive regulation of leukocyte cell-cell adhesion","12/178","218/18670",1.25324174017726e-06,4.37086481691991e-05,3.66585997495806e-05,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/MAP3K8/SELENOK/LYN/ITGB2/ITGA4",12
"GO:0045730","respiratory burst","6/178","37/18670",1.25554465117987e-06,4.37086481691991e-05,3.66585997495806e-05,"CD55/CD52/CD24/SELENOK/NCF4/CYBB",6
"GO:1903037","regulation of leukocyte cell-cell adhesion","14/178","304/18670",1.35827175712739e-06,4.67010721432071e-05,3.91683564530952e-05,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/MAP3K8/SELENOK/LYN/ITGB2/ITGA4/PRNP/IRF1",14
"GO:0022407","regulation of cell-cell adhesion","16/178","403/18670",1.65407779747317e-06,5.61781300727167e-05,4.71167988779584e-05,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/FXYD5/PTPRC/CD24/MAP3K8/SELENOK/LYN/MYADM/ITGB2/ITGA4/PRNP/IRF1",16
"GO:0002377","immunoglobulin production","11/178","193/18670",2.51148263938482e-06,8.42708331408039e-05,7.06782495471771e-05,"HLA-DQB1/HLA-E/PTPRC/IGKV3-20/IGLV2-14/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGLV1-51/IGLV1-44",11
"GO:0060337","type I interferon signaling pathway","8/178","95/18670",3.4986813528388e-06,0.000114633265501836,9.61433303027778e-05,"HLA-B/HLA-C/HLA-E/ISG20/IFITM2/IFITM1/HLA-F/IRF1",8
"GO:0071357","cellular response to type I interferon","8/178","95/18670",3.4986813528388e-06,0.000114633265501836,9.61433303027778e-05,"HLA-B/HLA-C/HLA-E/ISG20/IFITM2/IFITM1/HLA-F/IRF1",8
"GO:0031343","positive regulation of cell killing","7/178","68/18670",3.77891001146941e-06,0.000121195572019879,0.000101647160280492,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:0002474","antigen processing and presentation of peptide antigen via MHC class I","8/178","96/18670",3.78600171121345e-06,0.000121195572019879,0.000101647160280492,"HLA-B/HLA-C/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",8
"GO:0019886","antigen processing and presentation of exogenous peptide antigen via MHC class II","8/178","98/18670",4.42102058113098e-06,0.000138343172117413,0.000116028913891539,"HLA-DRA/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1",8
"GO:0031341","regulation of cell killing","8/178","98/18670",4.42102058113098e-06,0.000138343172117413,0.000116028913891539,"HLA-B/HLA-C/B2M/HLA-E/CD55/PTPRC/HLA-F/NCR3",8
"GO:0034340","response to type I interferon","8/178","99/18670",4.77095062901144e-06,0.000147634416686632,0.000123821513985689,"HLA-B/HLA-C/HLA-E/ISG20/IFITM2/IFITM1/HLA-F/IRF1",8
"GO:0002495","antigen processing and presentation of peptide antigen via MHC class II","8/178","101/18670",5.54157761533324e-06,0.000169596633612122,0.000142241303972521,"HLA-DRA/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1",8
"GO:0002504","antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","8/178","102/18670",5.96478860130524e-06,0.000180564524506903,0.000151440113344352,"HLA-DRA/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1",8
"GO:0002711","positive regulation of T cell mediated immunity","6/178","48/18670",6.07619794630135e-06,0.0001819592610801,0.000152609883903143,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0022409","positive regulation of cell-cell adhesion","12/178","255/18670",6.3453848847376e-06,0.000187998903233981,0.000157675353406861,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/MAP3K8/SELENOK/LYN/ITGB2/ITGA4",12
"GO:0001913","T cell mediated cytotoxicity","6/178","49/18670",6.86963295143123e-06,0.000201388713365642,0.000168905435116077,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0045785","positive regulation of cell adhesion","15/178","403/18670",7.71089723225192e-06,0.000223696341581475,0.000187614922789112,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CIB1/CD24/MAP3K8/SELENOK/LYN/MYADM/SPOCK2/ITGB2/ITGA4",15
"GO:0001910","regulation of leukocyte mediated cytotoxicity","7/178","78/18670",9.50612304688893e-06,0.000272933532841089,0.000228910331427526,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:0001819","positive regulation of cytokine production","16/178","464/18670",9.92150897139187e-06,0.000281953086584963,0.000236475063453475,"CD74/HLA-DPB1/HLA-DPA1/B2M/HLA-E/LY9/LTB/GPSM3/PTPRC/HLA-F/SELENOK/LRRFIP1/PDE4B/CYBB/IRF1/HSPA1A",16
"GO:0042098","T cell proliferation","10/178","184/18670",1.10319970581645e-05,0.000310344563706952,0.000260287096991676,"HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/CCND3/SELENOK/PRNP/IRF1",10
"GO:0001776","leukocyte homeostasis","7/178","86/18670",1.81358653049748e-05,0.00050508384874355,0.000423615632755149,"CD74/TSC22D3/GPR183/MEF2C/LYN/PDE4B/SLC39A3",7
"GO:0042129","regulation of T cell proliferation","9/178","156/18670",1.90713781197583e-05,0.00052587908973789,0.000441056675849335,"HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/SELENOK/PRNP/IRF1",9
"GO:0050870","positive regulation of T cell activation","10/178","202/18670",2.47669545610224e-05,0.000675591161910771,0.000566620726931872,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/MAP3K8/SELENOK/LYN",10
"GO:0048872","homeostasis of number of cells","11/178","246/18670",2.49859567959818e-05,0.000675591161910771,0.000566620726931872,"CD74/KLF2/TSC22D3/B2M/GPR183/ZFP36/MEF2C/LYN/PDE4B/SLC39A3/HSPA1A",11
"GO:0042102","positive regulation of T cell proliferation","7/178","95/18670",3.47090653107859e-05,0.000929468720101334,0.000779548744176456,"HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/SELENOK",7
"GO:0002683","negative regulation of immune system process","15/178","463/18670",3.89977501133248e-05,0.00103436889586295,0.000867528897257823,"CD74/TSC22D3/HLA-E/CD55/DUSP1/EZR/BANK1/ZFP36/PTPRC/ELF1/CIB1/HLA-F/LYN/PRNP/IRF1",15
"GO:0002705","positive regulation of leukocyte mediated immunity","8/178","133/18670",4.14910062963851e-05,0.00109011747674936,0.00091428543169492,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3/ITGB2",8
"GO:0002699","positive regulation of immune effector process","10/178","216/18670",4.38220524884769e-05,0.00114060202037765,0.000956626999231976,"HLA-B/CD74/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3/LYN/ITGB2",10
"GO:0050863","regulation of T cell activation","12/178","314/18670",4.98942968249358e-05,0.00128662608016154,0.0010790979011163,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/MAP3K8/SELENOK/LYN/PRNP/IRF1",12
"GO:0002709","regulation of T cell mediated immunity","6/178","70/18670",5.45913510020104e-05,0.0013948340600055,0.00116985232132749,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0032703","negative regulation of interleukin-2 production","4/178","23/18670",6.13875595393918e-05,0.00155422139379278,0.00130353104897522,"EZR/ZFP36/PTPRC/PRNP",4
"GO:0002708","positive regulation of lymphocyte mediated immunity","7/178","105/18670",6.60083821557161e-05,0.00165615625498801,0.00138902418211033,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:0002456","T cell mediated immunity","7/178","106/18670",7.01140885399931e-05,0.00174346193378465,0.00146224776757749,"HLA-B/HLA-C/B2M/HLA-E/CD55/PTPRC/HLA-F",7
"GO:0001909","leukocyte mediated cytotoxicity","7/178","107/18670",7.44260489460244e-05,0.00183430571959892,0.00153843877607106,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:0051592","response to calcium ion","8/178","148/18670",8.83764988319659e-05,0.00215902236181601,0.00181077978677869,"TXNIP/DUSP1/CALM1/JUNB/FOS/MEF2C/FOSB/RASGRP2",8
"GO:0002237","response to molecule of bacterial origin","12/178","343/18670",0.0001155617413926,0.00279860391111644,0.0023471991226561,"B2M/CD55/VIM/JUNB/FOS/ZFP36/ACP5/CD24/MEF2C/LYN/LY86/PDE4B",12
"GO:0001818","negative regulation of cytokine production","11/178","296/18670",0.000131969978444854,0.00316841715490446,0.00265736281460191,"KLF2/EZR/TMSB4X/BANK1/ZFP36/PTPRC/ACP5/CD24/HLA-F/ATP2B1/PRNP",11
"GO:0002703","regulation of leukocyte mediated immunity","9/178","201/18670",0.000136615954073745,0.00325192677004599,0.00272740262788701,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3/LYN/ITGB2",9
"GO:0002819","regulation of adaptive immune response","8/178","160/18670",0.000151918540754063,0.00358553505084801,0.0030072010877187,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/MEF2C/HLA-F/IRF1",8
"GO:0046718","viral entry into host cell","7/178","121/18670",0.000161187739420962,0.00374456154510631,0.00314057717796122,"CD74/CD55/CXCR4/IFITM2/IFITM1/ITGB1/HSPA1A",7
"GO:0032663","regulation of interleukin-2 production","5/178","54/18670",0.000161345560291834,0.00374456154510631,0.00314057717796122,"EZR/ZFP36/PTPRC/PDE4B/PRNP",5
"GO:1905477","positive regulation of protein localization to membrane","7/178","122/18670",0.000169642785495686,0.00390458807938418,0.00327479200534952,"EZR/YWHAZ/CIB1/PPP3CC/ITGB2/ITGB1/PRNP",7
"GO:0046640","regulation of alpha-beta T cell proliferation","4/178","30/18670",0.000180344811795319,0.00411688771188495,0.00345284846741858,"HLA-E/CD55/PTPRC/IRF1",4
"GO:0030099","myeloid cell differentiation","13/178","416/18670",0.000184457404853092,0.00417653554890944,0.00350287532194276,"CD74/KLF2/B2M/GPR183/JUNB/FOS/ZFP36/CIB1/EVI2B/MEF2C/LYN/MYH9/HSPA1A",13
"GO:0010038","response to metal ion","12/178","364/18670",0.000200686405326318,0.004507351926079,0.00378033220219949,"B2M/TXNIP/DUSP1/CALM1/JUNB/FOS/CRIP1/MEF2C/FOSB/RASGRP2/PRNP/CYBB",12
"GO:0001906","cell killing","8/178","168/18670",0.00021227869075228,0.0047295692299608,0.00396670665077313,"HLA-B/HLA-C/B2M/HLA-E/CD55/PTPRC/HLA-F/NCR3",8
"GO:0051385","response to mineralocorticoid","4/178","32/18670",0.000233152210549974,0.00515340401890221,0.00432217840610186,"FOS/FOSB/ATP2B1/CYBB",4
"GO:0030183","B cell differentiation","7/178","131/18670",0.000263102072856609,0.00572987440881033,0.0048056661865823,"KLF6/ZFP36L2/CD79A/GPR183/PTPRC/ITGA4/ITGB1",7
"GO:0046633","alpha-beta T cell proliferation","4/178","33/18670",0.000263347908196669,0.00572987440881033,0.0048056661865823,"HLA-E/CD55/PTPRC/IRF1",4
"GO:0030888","regulation of B cell proliferation","5/178","61/18670",0.000287632191348691,0.00611492864813821,0.00512861255606867,"CD74/GPR183/PTPRC/MEF2C/LYN",5
"GO:0034113","heterotypic cell-cell adhesion","5/178","61/18670",0.000287632191348691,0.00611492864813821,0.00512861255606867,"PTPRC/MYADM/ITGB2/ITGA4/ITGB1",5
"GO:0045123","cellular extravasation","5/178","61/18670",0.000287632191348691,0.00611492864813821,0.00512861255606867,"CD99/SELL/ITGB2/ITGA4/ITGB1",5
"GO:0042100","B cell proliferation","6/178","95/18670",0.000297367240417554,0.00618718838711861,0.00518921705792921,"CD74/CD79A/GPR183/PTPRC/MEF2C/LYN",6
"GO:0030260","entry into host cell","7/178","134/18670",0.000302139181561268,0.00618718838711861,0.00518921705792921,"CD74/CD55/CXCR4/IFITM2/IFITM1/ITGB1/HSPA1A",7
"GO:0044409","entry into host","7/178","134/18670",0.000302139181561268,0.00618718838711861,0.00518921705792921,"CD74/CD55/CXCR4/IFITM2/IFITM1/ITGB1/HSPA1A",7
"GO:0051806","entry into cell of other organism involved in symbiotic interaction","7/178","134/18670",0.000302139181561268,0.00618718838711861,0.00518921705792921,"CD74/CD55/CXCR4/IFITM2/IFITM1/ITGB1/HSPA1A",7
"GO:0051828","entry into other organism involved in symbiotic interaction","7/178","134/18670",0.000302139181561268,0.00618718838711861,0.00518921705792921,"CD74/CD55/CXCR4/IFITM2/IFITM1/ITGB1/HSPA1A",7
"GO:0002260","lymphocyte homeostasis","5/178","62/18670",0.00031047196328188,0.00626568418652199,0.00525505176599917,"CD74/TSC22D3/MEF2C/LYN/SLC39A3",5
"GO:0032623","interleukin-2 production","5/178","62/18670",0.00031047196328188,0.00626568418652199,0.00525505176599917,"EZR/ZFP36/PTPRC/PDE4B/PRNP",5
"GO:0051591","response to cAMP","6/178","97/18670",0.000332847774898508,0.00666892843951327,0.00559325416508738,"DUSP1/EZR/JUNB/FOS/FOSB/PER1",6
"GO:0072160","nephron tubule epithelial cell differentiation","3/178","15/18670",0.00035634403713338,0.00708870102440331,0.0059453189353306,"CD24/MEF2C/MTSS1",3
"GO:0050854","regulation of antigen receptor-mediated signaling pathway","5/178","65/18670",0.000387287302934551,0.00764961091257252,0.00641575606727711,"EZR/PTPRC/ELF1/LYN/PRNP",5
"GO:0002824","positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","6/178","100/18670",0.000392195223443621,0.00769199786824284,0.00645130615879462,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0006979","response to oxidative stress","13/178","451/18670",0.000401182377135965,0.00781323720506058,0.00655299002476781,"KLF2/TXNIP/DUSP1/BTG1/NR4A2/FOS/RHOB/SELENOK/NCF4/ARL6IP5/PRNP/CYBB/HSPA1A",13
"GO:0042108","positive regulation of cytokine biosynthetic process","5/178","67/18670",0.000445936167271155,0.00862452934618172,0.00723342364893782,"CD74/LTB/PTPRC/CYBB/IRF1",5
"GO:0033627","cell adhesion mediated by integrin","5/178","68/18670",0.000477653753014151,0.00917424622168559,0.00769447316107732,"CIB1/LYN/ITGB2/ITGA4/ITGB1",5
"GO:0071248","cellular response to metal ion","8/178","190/18670",0.000485638564523696,0.00922397294384581,0.00773617914103519,"B2M/JUNB/FOS/MEF2C/FOSB/RASGRP2/PRNP/CYBB",8
"GO:0002822","regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","7/178","145/18670",0.000486866794522562,0.00922397294384581,0.00773617914103519,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/MEF2C/HLA-F",7
"GO:0002821","positive regulation of adaptive immune response","6/178","105/18670",0.000509162097412128,0.00951688886773675,0.00798184877539747,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0007009","plasma membrane organization","6/178","105/18670",0.000509162097412128,0.00951688886773675,0.00798184877539747,"CXCR4/PTPRC/SNX9/ANXA6/MTSS1/MYH9",6
"GO:0043900","regulation of multi-organism process","12/178","405/18670",0.000525734981955221,0.0097611461649686,0.00818670824532375,"CD74/CD55/ISG20/CXCR4/VPS37B/IFITM2/ZFP36/CIB1/IFITM1/SELENOK/LY86/RESF1",12
"GO:0002706","regulation of lymphocyte mediated immunity","7/178","149/18670",0.000572905366546702,0.0105664996412753,0.00886216109004623,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:0030098","lymphocyte differentiation","11/178","353/18670",0.000592364411250026,0.0108535189824429,0.00910288523936154,"CD74/B2M/KLF6/LY9/ZFP36L2/CD79A/GPR183/PTPRC/ITGA4/ITGB1/IRF1",11
"GO:0030890","positive regulation of B cell proliferation","4/178","41/18670",0.000614191518713411,0.0111798913700448,0.00937661492965297,"CD74/GPR183/PTPRC/MEF2C",4
"GO:0001911","negative regulation of leukocyte mediated cytotoxicity","3/178","18/18670",0.000625759221252792,0.0113164898129158,0.00949118053287728,"HLA-E/PTPRC/HLA-F",3
"GO:0045637","regulation of myeloid cell differentiation","9/178","251/18670",0.000698026390704607,0.0125419580523376,0.0105189851339458,"CD74/B2M/FOS/ZFP36/CIB1/EVI2B/MEF2C/LYN/HSPA1A",9
"GO:0046641","positive regulation of alpha-beta T cell proliferation","3/178","19/18670",0.000737898428766852,0.0131733790007415,0.0110485601446265,"HLA-E/CD55/PTPRC",3
"GO:0002573","myeloid leukocyte differentiation","8/178","204/18670",0.000774559886109711,0.0137398043491436,0.0115236231128223,"CD74/GPR183/JUNB/FOS/EVI2B/MEF2C/LYN/MYH9",8
"GO:0042035","regulation of cytokine biosynthetic process","6/178","114/18670",0.000786413627536816,0.0138617845106964,0.0116259283111539,"CD74/LTB/ZFP36/PTPRC/CYBB/IRF1",6
"GO:0061756","leukocyte adhesion to vascular endothelial cell","4/178","44/18670",0.000805225199058615,0.0141041017570959,0.0118291606534993,"SELL/ITGB2/ITGA4/ITGB1",4
"GO:0030220","platelet formation","3/178","20/18670",0.000862054509224814,0.0149119366968392,0.0125066947104927,"CIB1/MEF2C/MYH9",3
"GO:0050860","negative regulation of T cell receptor signaling pathway","3/178","20/18670",0.000862054509224814,0.0149119366968392,0.0125066947104927,"EZR/ELF1/PRNP",3
"GO:0050792","regulation of viral process","8/178","208/18670",0.000878557263468088,0.015103592461473,0.0126674370866516,"CD74/ISG20/CXCR4/VPS37B/IFITM2/ZFP36/IFITM1/RESF1",8
"GO:0051701","interaction with host","8/178","209/18670",0.00090623284896515,0.0154837943826254,0.0129863137995071,"CD74/CD55/CXCR4/VPS37B/IFITM2/IFITM1/ITGB1/HSPA1A",8
"GO:0031960","response to corticosteroid","7/178","162/18670",0.000938961055358788,0.0159451618242331,0.0133732643250395,"DUSP1/ZFP36L2/FOS/ZFP36/FOSB/ATP2B1/CYBB",7
"GO:0036344","platelet morphogenesis","3/178","21/18670",0.000998711261471516,0.0166551548694501,0.0139687380347009,"CIB1/MEF2C/MYH9",3
"GO:0051412","response to corticosterone","3/178","21/18670",0.000998711261471516,0.0166551548694501,0.0139687380347009,"FOS/FOSB/ATP2B1",3
"GO:0071498","cellular response to fluid shear stress","3/178","21/18670",0.000998711261471516,0.0166551548694501,0.0139687380347009,"KLF2/MEF2C/MTSS1",3
"GO:0045646","regulation of erythrocyte differentiation","4/178","47/18670",0.00103476999217938,0.0171537763584499,0.0143869336631958,"B2M/ZFP36/LYN/HSPA1A",4
"GO:0034109","homotypic cell-cell adhesion","5/178","81/18670",0.00106286991115505,0.0175153414353066,0.0146901795879978,"CLIC1/MYL12A/CD99/LYN/MYH9",5
"GO:0031342","negative regulation of cell killing","3/178","22/18670",0.00114833557789067,0.0187906065123877,0.0157597489751444,"HLA-E/PTPRC/HLA-F",3
"GO:0071241","cellular response to inorganic substance","8/178","217/18670",0.00115374998693655,0.0187906065123877,0.0157597489751444,"B2M/JUNB/FOS/MEF2C/FOSB/RASGRP2/PRNP/CYBB",8
"GO:0042089","cytokine biosynthetic process","6/178","123/18670",0.00116800178987919,0.0189121220047299,0.0158616644537449,"CD74/LTB/ZFP36/PTPRC/CYBB/IRF1",6
"GO:0071277","cellular response to calcium ion","5/178","83/18670",0.00118618139159728,0.0190954634427655,0.0160154335744106,"JUNB/FOS/MEF2C/FOSB/RASGRP2",5
"GO:1901653","cellular response to peptide","11/178","385/18670",0.00120055131947657,0.0192157208318521,0.016116293877305,"KLF2/VIM/NR4A2/VAMP2/CCND3/RAB31/KLF3/LYN/ITGA4/ATP2B1/PRNP",11
"GO:0042107","cytokine metabolic process","6/178","124/18670",0.00121785120325924,0.0193812320061542,0.0162551086919233,"CD74/LTB/ZFP36/PTPRC/CYBB/IRF1",6
"GO:0019058","viral life cycle","10/178","328/18670",0.00123414894488635,0.0195290046108436,0.0163790461046818,"CD74/CD55/ISG20/CXCR4/VPS37B/IFITM2/IFITM1/ITGB1/RESF1/HSPA1A",10
"GO:0032496","response to lipopolysaccharide","10/178","330/18670",0.00129146707362416,0.0203205412431824,0.0170429107128874,"CD55/VIM/JUNB/FOS/ZFP36/ACP5/MEF2C/LYN/LY86/PDE4B",10
"GO:0043903","regulation of symbiosis, encompassing mutualism through parasitism","8/178","222/18670",0.00133402696893876,0.0208722758904183,0.0175056525374046,"CD74/ISG20/CXCR4/VPS37B/IFITM2/ZFP36/IFITM1/RESF1",8
"GO:0090150","establishment of protein localization to membrane","10/178","332/18670",0.00135093959938587,0.0210188088507801,0.0176285502560261,"YWHAZ/VPS37B/CIB1/CD24/VAMP2/RAB31/PPP3CC/SDCBP/ITGB2/PRNP",10
"GO:0030101","natural killer cell activation","5/178","86/18670",0.00139058497867786,0.021515439808988,0.0180450764192174,"HLA-E/PTPRC/HLA-F/NCR3/ITGB2",5
"GO:0030595","leukocyte chemotaxis","8/178","224/18670",0.00141212691386171,0.0217280301387008,0.0182233766900792,"CD74/DUSP1/CXCR4/GPR183/GPSM3/LYN/PDE4B/ITGB2",8
"GO:0010959","regulation of metal ion transport","11/178","394/18670",0.00144319653080859,0.0220840787818787,0.0185219959621993,"B2M/FXYD5/SARAF/CXCR4/CALM1/VAMP2/LYN/PER1/PDE4B/ATP2B1/PRNP",11
"GO:0002695","negative regulation of leukocyte activation","7/178","175/18670",0.0014685244382786,0.0223488555224366,0.0187440651627277,"CD74/BANK1/PTPRC/HLA-F/LYN/PRNP/IRF1",7
"GO:0038066","p38MAPK cascade","4/178","53/18670",0.00162512938969825,0.0245977464690741,0.0206302180534349,"DUSP1/EZR/ZFP36/PER1",4
"GO:0050901","leukocyte tethering or rolling","3/178","25/18670",0.00167943626266082,0.0252823242784345,0.0212043759137659,"SELL/ITGA4/ITGB1",3
"GO:0002720","positive regulation of cytokine production involved in immune response","4/178","54/18670",0.00174223209605077,0.0260866472446312,0.0218789644659686,"CD74/B2M/HLA-E/HLA-F",4
"GO:0046683","response to organophosphorus","6/178","134/18670",0.0018107933902044,0.0269682331107982,0.0226183536890716,"DUSP1/EZR/JUNB/FOS/FOSB/PER1",6
"GO:0071216","cellular response to biotic stimulus","8/178","236/18670",0.00196031718007899,0.0290398050346807,0.0243557884803766,"TXNIP/CD55/VIM/ZFP36/MEF2C/LYN/LY86/PDE4B",8
"GO:1903078","positive regulation of protein localization to plasma membrane","4/178","56/18670",0.00199376854136251,0.0293790761253682,0.024640336359139,"EZR/CIB1/ITGB1/PRNP",4
"GO:1903706","regulation of hemopoiesis","12/178","475/18670",0.00205688203999329,0.0301495604283226,0.025286544303297,"CD74/B2M/ZFP36L2/FOS/ZFP36/PTPRC/CIB1/EVI2B/MEF2C/LYN/IRF1/HSPA1A",12
"GO:0046631","alpha-beta T cell activation","6/178","138/18670",0.00210103986141465,0.0306355812253393,0.0256941716862999,"HLA-E/CD55/LY9/GPR183/PTPRC/IRF1",6
"GO:1905475","regulation of protein localization to membrane","7/178","187/18670",0.00214148693739734,0.0310627141700604,0.0260524096166924,"EZR/YWHAZ/CIB1/PPP3CC/ITGB2/ITGB1/PRNP",7
"GO:0002702","positive regulation of production of molecular mediator of immune response","5/178","95/18670",0.00216006411767761,0.0311698371385085,0.0261422540339603,"CD74/B2M/HLA-E/PTPRC/HLA-F",5
"GO:0035456","response to interferon-beta","3/178","28/18670",0.00234249969874954,0.0334557008257306,0.0280594160946032,"IFITM2/IFITM1/IRF1",3
"GO:0050858","negative regulation of antigen receptor-mediated signaling pathway","3/178","28/18670",0.00234249969874954,0.0334557008257306,0.0280594160946032,"EZR/ELF1/PRNP",3
"GO:0045071","negative regulation of viral genome replication","4/178","59/18670",0.00241652831324263,0.0341625956973641,0.0286522913549848,"ISG20/IFITM2/IFITM1/RESF1",4
"GO:0070527","platelet aggregation","4/178","59/18670",0.00241652831324263,0.0341625956973641,0.0286522913549848,"CLIC1/MYL12A/LYN/MYH9",4
"GO:1901654","response to ketone","7/178","193/18670",0.00255677018288726,0.0359626513098031,0.0301620044435238,"KLF2/TXNIP/DUSP1/FOS/FOSB/ATP2B1/CYBB",7
"GO:0048525","negative regulation of viral process","5/178","99/18670",0.0025864407596163,0.0361971734448815,0.0303586989980882,"ISG20/IFITM2/ZFP36/IFITM1/RESF1",5
"GO:0060326","cell chemotaxis","9/178","304/18670",0.00261854023930196,0.0364631728322798,0.0305817936369003,"CD74/DUSP1/TMSB4X/CXCR4/GPR183/GPSM3/LYN/PDE4B/ITGB2",9
"GO:0034446","substrate adhesion-dependent cell spreading","5/178","100/18670",0.00270192736678328,0.0374371528183654,0.0313986741392621,"CIB1/PARVG/PARVB/MYADM/ITGA4",5
"GO:0051250","negative regulation of lymphocyte activation","6/178","146/18670",0.00278549061786835,0.0380335052738164,0.0318988370793153,"CD74/BANK1/HLA-F/LYN/PRNP/IRF1",6
"GO:0051384","response to glucocorticoid","6/178","146/18670",0.00278549061786835,0.0380335052738164,0.0318988370793153,"DUSP1/ZFP36L2/FOS/ZFP36/FOSB/ATP2B1",6
"GO:0002685","regulation of leukocyte migration","7/178","196/18670",0.00278635271098042,0.0380335052738164,0.0318988370793153,"CD74/DUSP1/GPSM3/CD99/SELENOK/LYN/ITGA4",7
"GO:0031532","actin cytoskeleton reorganization","5/178","101/18670",0.00282110520245299,0.0380335052738164,0.0318988370793153,"EZR/GMFG/PARVG/PARVB/MYH9",5
"GO:0001782","B cell homeostasis","3/178","30/18670",0.00286287178010421,0.0380335052738164,0.0318988370793153,"CD74/MEF2C/LYN",3
"GO:0045954","positive regulation of natural killer cell mediated cytotoxicity","3/178","30/18670",0.00286287178010421,0.0380335052738164,0.0318988370793153,"HLA-E/HLA-F/NCR3",3
"GO:0046596","regulation of viral entry into host cell","3/178","30/18670",0.00286287178010421,0.0380335052738164,0.0318988370793153,"CD74/IFITM2/IFITM1",3
"GO:0090314","positive regulation of protein targeting to membrane","3/178","30/18670",0.00286287178010421,0.0380335052738164,0.0318988370793153,"CIB1/ITGB2/PRNP",3
"GO:0002262","myeloid cell homeostasis","6/178","147/18670",0.00288153307460512,0.0380335052738164,0.0318988370793153,"KLF2/B2M/ZFP36/LYN/PDE4B/HSPA1A",6
"GO:0071236","cellular response to antibiotic","6/178","147/18670",0.00288153307460512,0.0380335052738164,0.0318988370793153,"KLF2/RHOB/CRIP1/MEF2C/ID3/CYBB",6
"GO:0035690","cellular response to drug","10/178","369/18670",0.00291886388521725,0.0383445090581606,0.0321596770670163,"KLF2/B2M/VIM/CXCR4/RHOB/CD69/MEF2C/PDE4B/PRNP/CYBB",10
"GO:0002367","cytokine production involved in immune response","5/178","102/18670",0.00294404146856271,0.0384936877462308,0.0322847937669417,"CD74/B2M/HLA-E/CD55/HLA-F",5
"GO:0050866","negative regulation of cell activation","7/178","199/18670",0.00303144444118315,0.0391811665539767,0.0328613847050078,"CD74/BANK1/PTPRC/HLA-F/LYN/PRNP/IRF1",7
"GO:0042982","amyloid precursor protein metabolic process","4/178","63/18670",0.00307092251508559,0.0391811665539767,0.0328613847050078,"ITM2B/ITM2C/LYN/PRNP",4
"GO:0046686","response to cadmium ion","4/178","63/18670",0.00307092251508559,0.0391811665539767,0.0328613847050078,"B2M/FOS/PRNP/CYBB",4
"GO:1904377","positive regulation of protein localization to cell periphery","4/178","63/18670",0.00307092251508559,0.0391811665539767,0.0328613847050078,"EZR/CIB1/ITGB1/PRNP",4
"GO:0014074","response to purine-containing compound","6/178","149/18670",0.00308103248665024,0.0391811665539767,0.0328613847050078,"DUSP1/EZR/JUNB/FOS/FOSB/PER1",6
"GO:1903900","regulation of viral life cycle","6/178","149/18670",0.00308103248665024,0.0391811665539767,0.0328613847050078,"CD74/ISG20/VPS37B/IFITM2/IFITM1/RESF1",6
"GO:0072678","T cell migration","4/178","65/18670",0.00343946020268722,0.0435391378038377,0.0365164307990989,"GPR183/CD99/SELENOK/ITGA4",4
"GO:0070371","ERK1 and ERK2 cascade","9/178","317/18670",0.00345499082752177,0.0435391378038377,0.0365164307990989,"CD74/DUSP1/EZR/ZFP36L2/GPR183/PTPRC/CIB1/SCIMP/LYN",9
"GO:0045766","positive regulation of angiogenesis","7/178","204/18670",0.00347622802006287,0.0436094370985365,0.0365753910693196,"BTG1/CXCR4/RHOB/CIB1/ITGB2/ITGB1/CYBB",7
"GO:0071222","cellular response to lipopolysaccharide","7/178","205/18670",0.00357085705972154,0.0445956812167018,0.0374025575431772,"CD55/VIM/ZFP36/MEF2C/LYN/LY86/PDE4B",7
"GO:0045428","regulation of nitric oxide biosynthetic process","4/178","66/18670",0.00363453297610172,0.0451882782966218,0.0378995708363239,"KLF2/ACP5/DDAH2/ITGB2",4
"GO:0002717","positive regulation of natural killer cell mediated immunity","3/178","33/18670",0.00376765352085959,0.046635178024862,0.0391130908200581,"HLA-E/HLA-F/NCR3",3
"GO:0051014","actin filament severing","2/178","10/18670",0.00386805062241376,0.0474560395745477,0.0398015503414613,"GMFG/MYH9",2
"GO:2000271","positive regulation of fibroblast apoptotic process","2/178","10/18670",0.00386805062241376,0.0474560395745477,0.0398015503414613,"BTG1/STK17B",2
"GO:0048545","response to steroid hormone","10/178","385/18670",0.00394039116633114,0.048131532448387,0.0403680886338357,"TXNIP/DUSP1/ZFP36L2/NR4A2/FOS/ZFP36/FOSB/PER1/ATP2B1/CYBB",10
"GO:1903829","positive regulation of cellular protein localization","9/178","324/18670",0.00398529408721758,0.0484674411917072,0.0406498164998199,"EZR/YWHAZ/OAZ1/CIB1/VAMP2/PPP3CC/ITGB2/ITGB1/PRNP",9
"GO:0010922","positive regulation of phosphatase activity","3/178","34/18670",0.00410359550007012,0.0494740842757372,0.0414940916594013,"CALM1/PTPRC/MEF2C",3
"GO:0043368","positive T cell selection","3/178","34/18670",0.00410359550007012,0.0494740842757372,0.0414940916594013,"CD74/LY9/PTPRC",3
"GO:0032970","regulation of actin filament-based process","10/178","388/18670",0.00416013044029048,0.0499394968802111,0.0418844348775162,"TMSB4X/COTL1/RHOB/SNX9/MEF2C/GMFG/MYADM/CAPG/PDE4B/MYH9",10


Unnamed: 0,Title,Conditions,Sponsor/Collaborators,Start Date,Locations,URL
0,Mental Activity During (TMS) Therapy for Depression,Cognitive Impairment,"Augusta University|Lumos Labs, Inc.","March 6, 2015","Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03701932
1,Durability and Impact of the Seasonal Influenza Vaccine on H5 Induced B Cell Response,Influenza A Subtype H5N1 Infection,Emory University|National Institute of Allergy and Infectious Diseases (NIAID),October 2018,"The Hope Clinic of Emory University, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT03701061
7,Youth Engagement Study: Intervention to Increase HIV Treatment Engagement and Adherence for Young People Living With HIV,HIV/AIDS,University of Connecticut|Mercer University,"July 1, 2017","Southeast HIV/AIDS Research & Evaluation Project, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03665532
9,"A Phase 2, Multicenter, Randomized, Double-blind, Placebo-controlled Study to Evaluate the Efficacy, Safety, and Tolerability of TAK-935 (OV935) as an Adjunctive Therapy in Pediatric Patients With Developmental and/or Epileptic Encephalopathies",Epilepsy|Dravet Syndrome|Lennox-Gastaut Syndrome,Takeda|Ovid Therapeutics,"August 8, 2018","Center for Rare Neurological Diseases, Norcross, Georgia, United States",https://ClinicalTrials.gov/show/NCT03650452
12,Music Therapy With Intubated and Sedated Pediatric Patients,Respiratory Syncytial Virus Infections,Children's Healthcare of Atlanta,"January 16, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03629145
14,Gabapentin Premedication to Reduce Postoperative Pain for Pediatric Tonsillectomy,Tonsillitis|Tonsillectomy,Children's Healthcare of Atlanta,"July 31, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03625011
16,A Sleep Intervention (SLEEP-Extend) for Young Adults At-Risk for Type 2 Diabetes,"Diabetes Mellitus, Type 2",Emory University|National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK),September 2018,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03616171
19,Long Term Comparative Effectiveness of Once Weekly Semaglutide Versus Standard of Care in a Real World Adult US Population With Type 2 Diabetes - a Randomized Pragmatic Trial,"Diabetes Mellitus, Type 2",Novo Nordisk A/S,"July 13, 2018","Novo Nordisk Investigational Site, Statesboro, Georgia, United States",https://ClinicalTrials.gov/show/NCT03596450
23,Adiposity and Endothelin Receptor Function,Hypertension,"Augusta University|National Heart, Lung, and Blood Institute (NHLBI)","May 21, 2018","Georgia Prevention Institute/ Laboratory of Integrative and Exercise Physiology, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03583866
25,Weight Loss Aid in an Exposed Population,Polybrominated Biphenyl Poisoning,Emory University|Healthway Compounding Pharmacy in central Michigan|Michigan Public Health Departments,"September 14, 2018","Michele Marcus, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03582722
30,Improving Health-Promoting Behaviors in Adolescent Cancer Survivors Using AWAKE: A Feasibility Trial,Health Behavior,Emory University,"June 20, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03564587
31,Cognitive Behavioral Therapy for African Americans With Uncontrolled Type-2 Diabetes,"Diabetes Mellitus, Type 2",Emory University|National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK),October 2018,"Emory Dunwoody Clinic, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03562767
32,The Effects of Contact Lenses With Experimental Dye on Visual Function,Ametropia,"Johnson & Johnson Vision Care, Inc.","May 15, 2018","Georgia Center for Sight, Statesboro, Georgia, United States",https://ClinicalTrials.gov/show/NCT03556579
36,Evaluating the Effects of Propofol vs. Dexmedetomidine,Sedative Adverse Reaction,Children's Healthcare of Atlanta|Morehouse School of Medicine,"July 24, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03552146
40,Effect of DASH Eating Pattern on Heart Failure Outcomes,Heart Failure NYHA Class III,University of Georgia|Emory University,June 2018,"University of Georgia Clinical and Translational Research Unit, Athens, Georgia, United States",https://ClinicalTrials.gov/show/NCT03538990
42,Rifaximin for Infection Prophylaxis in Hematopoietic Stem Cell Transplantation,Microbial Colonization,Emory University,"July 18, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03529825
46,"Prospective Psychometric Evaluation Study of a Patient-reported Outcomes (PRO) Instrument for Congenital Thrombotic Thrombocytopenic Purpura (cTTP, Upshaw-Schulman Syndrome [USS], Hereditary Thrombotic Thrombocytopenic Purpura [hTTP]",Congenital Thrombotic Thrombocytopenic Purpura,Baxalta now part of Shire|Shire,"July 12, 2018","AutoCruitment, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03519672
48,Sleep-Safe: A Strong African American Families Study,Weight Gain,University of Georgia|Augusta University|National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK),"March 4, 2018","University of Georgia, Athens, Georgia, United States",https://ClinicalTrials.gov/show/NCT03505203
49,Spironolactone & RAAS: Effect on Urinary Proteinuria & Mean Epidermal Growth Factor Receptor,"Renal Insufficiency, Chronic|Diabetic Nephropathy Type 2","NephroNet, Inc.","March 1, 2018","NephroNet, Buford, Georgia, United States",https://ClinicalTrials.gov/show/NCT03502031
50,Evaluation of Human Immune Responses to Influenza Virus Vaccination in Patients With Lymphoma,Chronic Lymphocytic Leukemia|Diffuse Large B-Cell Lymphoma|Follicular Lymphoma|Mantle Cell Lymphoma|Mature T-Cell and NK-Cell Non-Hodgkin Lymphoma,Emory University,"April 6, 2018","Emory University Hospital/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03501576
51,Meditation for Pain,Chronic Pain,Emory University,"June 5, 2018","Emory University Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03495726
52,Fludeoxyglucose F-18-PET in Planning Lung Cancer Radiation Therapy,Stage I Lung Cancer|Stage I Non-Small Cell Lung Cancer AJCC v7|Stage IA Non-Small Cell Lung Carcinoma AJCC v7|Stage IB Non-Small Cell Lung Carcinoma AJCC v7|Stage II Lung Cancer|Stage II Non-Small Cell Lung Cancer AJCC v7|Stage IIA Non-Small Cell Lung Carcinoma AJCC v7|Stage IIB Non-Small Cell Lung Carcinoma AJCC v7,Emory University|RefleXion Medical,"April 13, 2018","Emory University Hospital/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03493789
53,"Effect of Vibration on Muscle Properties, Physical Activity and Balance in Children With Cerebral Palsy","Cerebral Palsy, Spastic",University of Georgia|Emory University,"November 2, 2018","University of Georgia, Athens, Georgia, United States",https://ClinicalTrials.gov/show/NCT03484078
54,Smartphone-Enabled Supervised Exercise Therapy for the Treatment of Symptomatic Peripheral Arterial Disease,Peripheral Arterial Disease,Emory University|Woodruff Health Sciences Center Foundation,"August 24, 2018","Grady Health System (non-CRN), Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03479255
56,Effect of Ketorolac on Post Adenotonsillectomy Pain,Obstructive Sleep Apnea,Emory University,"July 19, 2018","Childrens Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03467750
57,Innovative Gait Biofeedback Strategies for Stroke Rehabilitation,"Stroke, Cardiovascular|Gait, Hemiplegic",Emory University,"March 22, 2018","Emory Univeristy, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03466372
59,"Compassion Meditation and ReliefLink App for Suicidal, Low-Income, African Americans",Suicidal Ideation,Emory University,"May 13, 2010","Grady Health System (non-CRN), Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03463980
60,GPR109A and Parkinson's Disease: Role of Niacin in Outcome Measures,Parkinson's Disease,VA Office of Research and Development,"September 28, 2016","Charlie Norwood VA Medical Center, Augusta, GA, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03462680
62,Achilles Tendinopathy Shear Wave Elastography Study,Achilles Tendinopathy,Emory University,"February 27, 2018","Emory Orthopaedics and Spine Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03456778
65,Contemplative Well-being Apps for the Workplace,Social Behavior|Depression|Inflammation,Emory University,"June 6, 2016","Emory University, Wesley Woods Health Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03452670
66,Chemotherapy-Induced Peripheral Neuropathy-Essential Oil Intervention,Breast Cancer|Peripheral Neuropathies,Augusta University|American Holistic Nurses Association|American Nurses Foundation|Ananda Apothecary|The Jojoba Company,"June 25, 2018","Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03449303
68,Living Well With a Disability Curriculum Adaptation Evaluation Plan,Health Education|Community Health Services|Health Services for Persons With Disabilities|Developmental Disabilities,Georgia Southern University,"March 24, 2018","B and B Care Services, Springfield, Georgia, United States",https://ClinicalTrials.gov/show/NCT03447119
69,Gemcabene for the Treatment of Pediatric NAFLD,Non-Alcoholic Fatty Liver Disease,"Emory University|Gemphire Therapeutics, Inc.","March 29, 2018","Children's Healthcare of Atlanta / Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03436420
70,Gabapentin Premedication for ACL Reconstruction: RCT,Anterior Cruciate Ligament (ACL) Reconstruction,Children's Healthcare of Atlanta,"October 9, 2015","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03417479
71,Exercise is Medicine at Emory Seavey Internal Medicine Clinic,Physical Activity,Emory University,"August 20, 2018","Paul W. Seavey Internal Medicine Clinic, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03416634
72,Paravertebral Nerve Blocks in Neonates,Congenital Heart Disease,Emory University,"July 18, 2018","Children's Healtcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03408340
74,ULTRAsound-assisted Catheter vs. STAndaRd Catheter Thrombolysis for Submassive Pulmonary Embolism,Submassive Pulmonary Embolism,Piedmont Healthcare,"December 6, 2017","Piedmont Healthcare, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03389971
76,CBT for African Americans With Cognitive Impairment,Alzheimer Disease,Emory University|Alzheimer's Association,"January 10, 2018","Emory Clinic, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03384069
77,iEAT 2.0 Open Trial,Gastrointestinal Disorders,Emory University,"November 29, 2017","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03383029
79,Exercise and RP (AVAMC and Emory),Retinitis Pigmentosa,Emory University,"February 23, 2018","Emory Clinic, Atlanta VA Medical Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03381235
80,VX15/2503 and Immunotherapy in Resectable Pancreatic and Colorectal Cancer,Colon Carcinoma Metastatic in the Liver|Colorectal Adenocarcinoma|Pancreatic Adenocarcinoma|Resectable Pancreatic Carcinoma|Stage I Pancreatic Cancer|Stage IA Pancreatic Cancer|Stage IB Pancreatic Cancer|Stage II Pancreatic Cancer|Stage IIA Pancreatic Cancer|Stage IIB Pancreatic Cancer|Stage III Pancreatic Cancer|Stage IV Colorectal Cancer|Stage IVA Colorectal Cancer|Stage IVB Colorectal Cancer,Emory University|Vaccinex Inc.,"December 15, 2017","Emory University Hospital/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03373188
81,Exercise Effects on Word Learning,Aging|Aphasia,VA Office of Research and Development,"December 9, 2016","Atlanta VA Medical and Rehab Center, Decatur, GA, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT03370471
83,HGNS on Cardiovascular Outcomes,Obstructive Sleep Apnea,Emory University|American Heart Association|American Academy of Sleep Medicine,"December 13, 2017","Raj C. Dedhia, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03359096
84,IAI for Persistent DME After Treatment With Bevacizumab And Ranibizumab,Diabetic Macular Edema,"Southeast Retina Center, Georgia",June 2015,"Southeast Retina Center, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03340610
85,Longitudinal Assessment of Exercise Capacity and Vascular Function in Patients With CF,Cystic Fibrosis,Augusta University|Vertex Pharmaceuticals Incorporated,May 2014,"Georgia Prevention Institute, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03338595
86,AflacLL1602 ENCERT,Lymphoblastic Leukemia|Lymphoblastic Lymphoma,Emory University,"July 24, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03328104
87,Neostigmine For Snoring During DISE,Snoring,Emory University,"November 14, 2017","Raj C. Dedhia, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03316963
88,Two-Phased Study of SPIRIT in Mild AD,Alzheimer Disease and Related Dementias,Emory University|National Institute on Aging (NIA),"May 4, 2018","Emory Brain Health Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03311711
89,Vitamin K to Slow Progression of Cardiovascular Disease Risk in Hemodialysis Patients,Cardiovascular Diseases|Chronic Kidney Disease Stage 3|Chronic Kidney Disease Stage 4|Chronic Kidney Disease Stage 5|Vitamin K Deficiency|Hemodialysis - Augusta University Study,Augusta University,"September 13, 2017","Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03311321
90,Thyroid Ultrasound Elasticity (TrUE) Imaging,"Cancer, Thyroid",Emory University,"October 23, 2017","Emory Univeristy Hospital Midtown, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03307694
91,Promoting Transactional Supports to Optimize Social Communication Outcomes for Infants and Their Families,Autism Spectrum Disorder,Emory University,"February 1, 2018","Marcus Autism Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03307057
92,Granulocyte-Macrophage Stimulating Factor (GM-CSF) in Peripheral Arterial Disease,Peripheral Artery Disease (PAD),"Emory University|National Heart, Lung, and Blood Institute (NHLBI)","December 19, 2017","Emory University Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03304821
96,Correlation of CO2 Measured by Blood Gas vs Transcutaneous Monitor,Respiratory Complication,Memorial Health University Medical Center,"August 29, 2017","Memorial University Medical Center, Savannah, Georgia, United States",https://ClinicalTrials.gov/show/NCT03268395
98,Pembrolizumab and Radiation Therapy in Patients With Relapsed or Refractory Multiple Myeloma,ISS Stage I Plasma Cell Myeloma|ISS Stage II Plasma Cell Myeloma|ISS Stage III Plasma Cell Myeloma|Recurrent Plasma Cell Myeloma|Refractory Plasma Cell Myeloma,Emory University|Merck Sharp & Dohme Corp.,"May 29, 2018","Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03267888
99,Pembrolizumab + Idelalisib for Lung Cancer Study,Non Small Cell Lung Cancer|Metastasis|Recurrence,Zhonglin Hao|Merck Sharp & Dohme Corp.|Gilead Sciences|Augusta University,"September 26, 2017","Georgia Cancer Center at Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03257722
100,Safety and Efficacy of Propranolol in the Treatment of Tardive Dyskinesia,Tardive Dyskinesia,Emory University|Atlanta Clinical and Translational Science Institute,"September 18, 2017","Emory Clinic, Executive Park, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03254186
101,Immunologic Responses to a Live Attenuated Oral Cholera Vaccine,Cholera,Emory University,"August 29, 2017","The Hope Clinic of Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03251495
102,App Reminder on ASA Adherence,Thromboembolic Event,Emory University|National Association of Orthopedic Nurses,"October 3, 2017","Emory Orthopedic and Spine Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03244267
103,Spinal Cord Stimulation to Augment Activity Based Therapy,Spinal Cord Stimulation|Walking|Spasticity|Human|Spinal Cord Injuries,"Shepherd Center, Atlanta GA|Foundation Wings For Life","July 1, 2017","Shepherd Center, Inc., Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03240601
104,Enhancing Corticospinal Activation for Improved Walking Function,Spinal Cord Injuries,"Shepherd Center, Atlanta GA|National Institute on Disability, Independent Living, and Rehabilitation Research","March 1, 2017","Shepherd Center, Inc., Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03237234
105,Enhancing Corticospinal Excitability to Improve Functional Recovery,Spinal Cord Injuries|Tetraplegia,"Shepherd Center, Atlanta GA|The Craig H. Neilsen Foundation","May 3, 2018","Shepherd Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03237091
107,A Randomized Study to Evaluate the Efficacy of Insulclock® in Patients With Uncontrolled Type 2 Diabetes,Diabetes,Emory University|Insulcoud S.L.,"November 29, 2017","Emory Clinic, Emory University Hospital (non-CRN), Emory University Hospital Clinical Research Network, Emory University Hospital Midtown, Grady Health System (non-CRN), Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03224234
108,Home Versus Office Biofeedback Therapy for Fecal Incontinence,Fecal Incontinence - Augusta University Study,Augusta University,October 2015,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03216291
110,Microneedle Patch Study in Healthy Infants/Young Children,Vaccination|Skin Absorption,Emory University|Micron Biomedical,"July 11, 2017","Emory Children's Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03207763
113,Encopresis & MIE (DoD #2),Encopresis|Autism Spectrum Disorder,Emory University|United States Department of Defense,"October 25, 2017","Marcus Autism Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03197922
115,"""Evaluation of MDMA on Startle Response",Startle Response,Multidisciplinary Association for Psychedelic Studies,"September 21, 2017","Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03181763
116,Dry Needling and Spinal Manipulation vs. Conventional PT for Lumbar Spinal Stenosis,Lumbar Spinal Stenosis,Alabama Physical Therapy & Acupuncture|Universidad Rey Juan Carlos,"March 15, 2017","Benchmark PT - Canton, Canton, Georgia, United States",https://ClinicalTrials.gov/show/NCT03167736
118,Glutathione (GSH) Supplementation After Hospitalization,Malnutrition,"Emory University|Your Energy Systems, LLC",September 2019,"Emory University Hospital Clinical Research Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03166371
120,SMS-Based Follow-Ups to Improve Post-Discharge Surgical Outcomes,Surgical Site Infection,Emory University,"June 9, 2017","Grady Health System, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03161262
123,Examination of Differential Valuation of Leisure Items and Attention as Reinforcers in Children With Autism,Autism,Emory University|National Institute of Mental Health (NIMH),"June 22, 2012","Marcus Autism Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03152383
125,Intranasal (NAS) Ketamine for Cancer Pain,Cancer|Pain,Emory University,"July 25, 2017","Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03146806
130,Overcoming Psychological Distress Through Hymns,Cancer,Emory University,"June 28, 2018","Grady Cancer Center for Excellence, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03082612
132,Evaluating Effectiveness of Powered Drill Bone Marrow Biopsy,Plasma Cell Myeloma,Emory University,"February 14, 2017","Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03078452
133,Stroke COunseling for Risk REduction,Stroke,Georgia State University,"March 1, 2017","Georgia State University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03076125
135,A Study of Pleiotropic Pioglitazone Effects on the Alcoholic Lung (APPEAL Study),Alcoholism,Emory University|National Institute on Alcohol Abuse and Alcoholism (NIAAA),"January 3, 2018","Atlanta VA Medical Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT03060772
138,Open Trial Obesity CHANGE Program ASD,Autism Spectrum Disorder|Obesity,Emory University,"October 6, 2017","Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03047018
139,Anti-LPS Antibody Treatment for Pediatric NAFLD,Nonalcoholic Fatty Liver Disease (NAFLD),"Miriam Vos, MD|Advanced MR Analytics AB|Immuron Ltd.|Emory University","February 1, 2017","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03042767
140,"Delirium Prevention With Ketamine in Ear, Nose, and Throat (ENT) Patients",Otolaryngeal Cancer,Emory University,"March 17, 2017","Emory University Hospital Midtown, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03040024
143,"Testing Tele-Savvy, an On-line Psychoeducation Program for Dementia Family Caregivers",Alzheimer Disease|Dementia,Emory University|National Institute on Aging (NIA),"May 18, 2017","Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03033875
148,TMS for Suicidal Crisis in Active Duty SMs,Suicide|Suicidal Ideation|Suicidal Impulses|Suicidal Intention|Suicidal and Self-Injurious Behavior|Suicidal Depression,Eisenhower Army Medical Center|Congressionally Directed Medical Research Programs|Augusta University|The Geneva Foundation,"June 12, 2017","Eisenhower Army Medical Center, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03014362
149,Comparing Mesenchymal Stem Cell Counts in Unilateral vs. Bilateral Posterior Superior Iliac Spine Bone Marrow Aspiration,Osteoarthritis,Emory University,"September 7, 2017","The Emory Clinic, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03014037
150,A Feasibility Study of N-acetylcysteine for Self-injurious Behavior in Children With Autism Spectrum Disorder,Autism Spectrum Disorder,Emory University,"July 5, 2018","Marcus Autism Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03008889
151,Feasibility Study: fMRI Evaluation of Auricular PENFS for Fibromyalgia,Fibromyalgia,VA Office of Research and Development,"June 1, 2017","Atlanta VA Medical and Rehab Center, Decatur, GA, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT03008837
152,Dynamics of Inflammation and Its Blockade on Motivational Circuitry in Depression,Depression,Emory University,August 2016,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03006393
153,Inflammation-Induced CNS Glutamate Changes in Depression,Depression,Emory University,"May 15, 2017","Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03004443
156,Closed Loop Vagal Nerve Stimulation for Patients With Posttraumatic Stress Disorder,PostTraumatic Stress Disorder,Emory University|Georgia Institute of Technology,"April 19, 2017","Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02992899
159,Endolaserless Vitrectomy With Intravitreal IAI for PDR-Related VH,Proliferative Diabetic Retinopathy,"Southeast Retina Center, Georgia",June 2016,"Southeast Retina Center, PC, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02976012
160,Pembrolizumab in Patients With Locally Advanced or Metastatic Skin Cancer,Recurrent Skin Carcinoma|Skin Squamous Cell Carcinoma,Emory University|Merck Sharp & Dohme Corp.,"January 27, 2017","Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02964559
161,Vitamin K to Slow Progression of Dyslipidemia and Diabetes Risk (Vita-K 'n' Kids Study II),Obesity|Insulin Resistance|Obesity in Diabetes|Nutritional and Metabolic Diseases|Hyperlipidemia|Hyperglycemia|Cardiovascular Diseases - Augusta University Study,Augusta University,October 2016,"Medical College of Georgia; Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02959762
165,Acupuncture for Postoperative Analgesia in Laparoscopic Surgery,Surgery,Emory University,September 2016,"Atlanta Veterans Affairs (VA) Medical Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02940288
167,FMT for MDRO Colonization After Infection in Renal Transplant Recipients,Infection Due to Resistant Organism,Emory University|Cepheid,"December 1, 2016","Emory University Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02922816
170,Adapting Project UPLIFT for Blacks in Georgia,Depressive Symptoms,Morehouse School of Medicine|Emory University,August 2016,"Demetrius Geiger, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02909387
171,Palbociclib With Cisplatin or Carboplatin in Advanced Solid Tumors,Solid Neoplasm|Stage III Pancreatic Cancer|Stage IIIA Breast Cancer|Stage IIIA Non-Small Cell Lung Cancer|Stage IIIB Breast Cancer|Stage IIIB Non-Small Cell Lung Cancer|Stage IIIC Breast Cancer|Stage IV Breast Cancer|Stage IV Non-Small Cell Lung Cancer|Stage IVA Pancreatic Cancer|Stage IVB Pancreatic Cancer|Sarcoma|Colorectal Cancer|Head and Neck Cancer|Cancer of Unknown Primary|Bladder Cancer|Ovarian Cancer,Emory University|Pfizer,October 2016,"Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02897375
179,Tocilizumab in Schizophrenia,Schizophrenia|Psychotic Disorders,Brian Miller|Brain & Behavior Research Foundation|Augusta University,September 2016,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02874573
184,Pembrolizumab + Poly-ICLC in MRP Colon Cancer,Metastatic Colon Cancer|Solid Tumor,"Asha Nayak|Oncovir, Inc.|Merck Sharp & Dohme Corp.|Augusta University","January 10, 2018","Georgia Cancer Center at Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02834052
191,Siltuximab in Schizophrenia,Schizophrenia|Psychotic Disorders,Brian Miller|Stanley Medical Research Institute|Augusta University,May 2016,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02796859
193,Smartphone Delivered In-home Cardiopulmonary Rehabilitation,Cardiovascular Disease|Coronary Artery Disease,Emory University|Atlanta VA Medical Center,May 2016,"Atlanta VA Medical Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02791685
194,Aerobic Exercise and Cognitive Training in Older Adults,Sedentary Lifestyle,VA Office of Research and Development,"February 1, 2013","Atlanta VA Medical and Rehab Center, Decatur, GA, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT02787655
196,Long Term Nitric Oxide Bioavailability on Vascular Health in Chronic Obstructive Pulmonary Disease,Chronic Obstructive Pulmonary Disease (COPD) - Augusta University Study,Augusta University,September 2015,"Georgia Prevention Institute, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02774226
199,Transfusion of Biotinylated Red Blood Cells,Anemia,Emory University,April 2016,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02757898
200,Transplantation Using Reduced Intensity Approach for Patients With Sickle Cell Disease From Mismatched Family Donors of Bone Marrow,Sickle Cell Disease,Emory University,April 2016,"Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02757885
202,Defining a PD-specific Breath Fingerprint of Underlying Inflammatory and Neurodegenerative Processes,Parkinson's Disease,Emory University|Michael J. Fox Foundation for Parkinson's Research,February 2016,"The Emory Clinic Executive Park, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02749214
204,Pioglitazone and Tyrosine Kinase Inhibitor in Treating Patients With Relapsed Chronic Myeloid Leukemia,"Chronic Myelogenous Leukemia, BCR-ABL1 Positive|Recurrent Chronic Myelogenous Leukemia, BCR-ABL1 Positive",Emory University,May 2016,"Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02730195
207,The Role of Endothelin-1 in Sickle Cell Disease,Sickle Cell Anemia,"Augusta University|Gilead Sciences|National Heart, Lung, and Blood Institute (NHLBI)",September 2015,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02712346
209,"Dasatinib or Nilotinib Followed by Imatinib in Patients With Newly Diagnosed, Chronic Phase Chronic Myeloid Leukemia",Chronic Myelogenous Leukemia|Chronic Myeloid Leukemia|Leukemia,Emory University,October 2016,"Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02709083
211,Evaluation of a CarePartner-Integrated Telehealth Rehabilitation Program for Persons With Stroke,Stroke,Emory University,January 2016,"Emory University Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02703532
215,Vibration Training for Preventing Falls in Healthy Population and Multiple Sclerosis,Falls Prevention,Georgia State University,April 2015,"Georgia State University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02694666
217,Mechanisms for Vascular Dysfunction and Exercise Tolerance in CF,Cystic Fibrosis - Augusta University Study,Augusta University,April 2015,"Georgia Prevention Institute, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02690064
221,Effects of Dry Needling Using Spinal and Peripheral Sites Versus Peripheral Sites Only,Plantar Fasciitis|Achilles Tendinitis|Patellofemoral Pain Syndrome,Emory University,"October 27, 2017","The Emory Clinic, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02646579
226,Canagliflozin-Mealtime Insulin Rescue,"Diabetes Mellitus, Type 2","Atlanta Research and Education Foundation|Janssen Scientific Affairs, LLC",April 2016,"Atlanta VA Medical Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT02624908
227,The Use of Ambulatory Blood Pressure Monitors to Assess Angiotensin Converting Enzyme Inhibitors,"Hypertension, Resistant to Conventional Therapy",Memorial Health University Medical Center,November 2015,"Memorial Family Medicine Center, Savannah, Georgia, United States",https://ClinicalTrials.gov/show/NCT02623036
231,Conditioning Neural Circuits to Improve Upper Extremity Function,Spinal Cord Injury|Tetraplegia,"Shepherd Center, Atlanta GA|United States Department of Defense",January 2017,"Shepherd Center, Inc., Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02611375
234,Suicidal Behavior in Patients Diagnosed With Bipolar Disorder,Depression|Alcoholism|Drug Abuse,Emory University,January 2016,"Grady Health System, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02604277
236,Low Pulse Amplitude Focal ECT (LAP Study),Depression - Augusta University Study,Augusta University,March 2015,"Medical Colleage of Georgia, Augusta University, Evans, Georgia, United States",https://ClinicalTrials.gov/show/NCT02583490
237,RIC Transplant Using Haplo Donors,Chronic Myelogenous Leukemia|Acute Myelogenous Leukemia|Myelodysplastic Syndrome|Acute Lymphocytic Leukemia|Chronic Lymphocytic Leukemia|Hodgkin's Lymphoma|Non-Hodgkin's Lymphoma|Myelofibrosis|CMML|Multiple Myeloma,"Northside Hospital, Inc.|Blood and Marrow Transplant Group of Georgia",November 2015,"Northside Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02581007
241,Human Milk for Congenital Gastrointestinal Disorders,Congenital Gastrointestinal Disorders,Emory University|Chatham Valley Foundation|Prolacta Bioscience,"July 26, 2018","Children's Healthcare of Atlanta-Egleston, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02567292
243,Premotor Cortex: A New Target for Stroke Motor Rehabilitation,Stroke,Emory University|American Heart Association,September 2015,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02565199
244,Role of Sympathetic Overactivity and Angiotensin II in PTSD and CV,"Stress Disorders, Post-Traumatic",Emory University|American Heart Association,October 2015,"Atlanta VA Medical Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT02560805
248,Inflammation-related Alterations in Neurocircuitry: Reversal With Levodopa,Depression,Emory University|National Institute of Mental Health (NIMH),July 2015,"Emory University Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02513485
249,Analysis of Bone Marrow and Blood B Cell Immune Responses to Influenza Vaccination,Influenza,National Institute of Allergy and Infectious Diseases (NIAID),"December 23, 2015","Emory Clinic - Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02485639
250,Direct Instruction Language for Learning in Autism Spectrum Disorder,Autism Spectrum Disorder|Moderate Language Delay,Emory University,October 2015,"Marcus Autism Center - Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02483910
253,Health Evaluation in African Americans Using RAS Therapy,Alzheimer's Disease,Emory University,April 2015,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02471833
258,Motor Training in PD,Parkinson Disease,VA Office of Research and Development,"November 3, 2014","Atlanta VA Medical and Rehab Center, Decatur, GA, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT02457832
260,Characterization of 3q29 Deletion Syndrome and 3q29 Duplication Syndrome,Microdeletion 3q29 Syndrome|Microduplication 3q29 Syndrome,Emory University,July 2013,"Internet-Based, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02447861
262,Effects of an Immunosuppressant Mycophenolate Mofetil or MMF on the Urinary Sodium Excretion Response to Mental Stress,"Psychological Stress|Hypertension, Renal - Augusta University Study",Augusta University,April 2014,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02432339
263,Effectiveness of Prazosin on the Urinary Sodium Excretion Response to Mental Stress,"Hypertension|Stress, Psychological|Blood Pressure",Augusta University|The University of Texas at Arlington,April 2015,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02431936
268,High Dose Chemotherapy Using BeEAM for Autologous Transplant in Multiple Myeloma,Multiple Myeloma,"Northside Hospital, Inc.|Teva Pharmaceuticals USA",April 2015,"Blood and Marrow Transplant Group of Georgia, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02416206
270,Sympatholysis in Chronic Kidney Disease,Chronic Kidney Disease,Emory University,May 2015,"Atlanta VA Medical Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT02411773
276,Simvastatin With Topotecan and Cyclophosphamide in Relapsed and/or Refractory Pediatric Solid and CNS Tumors,Retinoblastoma|Clear Cell Sarcoma|Renal Cell Carcinoma|Rhabdoid Tumor|Wilms Tumor|Hepatoblastoma|Neuroblastoma|Germ Cell Tumors|Ewings Sarcoma|Non-rhabdomyosarcoma Soft Tissue Sarcoma|Osteosarcoma|Rhabdomyosarcoma,Emory University|Children's Healthcare of Atlanta,February 2015,"Children's Healthcare of Atlanta/Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02390843
277,Effectiveness of Avapro in Obese Normotensive/Hypertensive African Americans,"Hypertension|Obesity|Stress, Psychological|Blood Pressure - Augusta University Study",Augusta University,September 2014,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02386293
278,Evaluation of Human Immune Responses to Influenza Virus Vaccination in Healthy Volunteers,Influenza,National Institute of Allergy and Infectious Diseases (NIAID),"April 1, 2015","Emory University Hospital - W. Dean Warren General Clinical Research Center (GCRC), Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02385123
287,Vitamin K and Glucose Metabolism in Adults at Risk for Diabetes (Vita-K 'n' Adults Study),Obesity|Insulin Resistance|Insulin Sensitivity|Beta-Cell Dysfunction|Prediabetes,Augusta University|University of Alabama at Birmingham|Yale University|Tufts University|Nattopharma ASA,February 2015,"Medical College of Georgia; Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02366481
288,BMT Auto MSCs GvHD Ph 1,Graft Versus Host Disease|Acute Graft Versus Host Disease|Chronic Graft Versus Host Disease,Emory University|CURE Foundation,January 2015,"Children's Healthcare of Atlanta/Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02359929
289,Role of Cardiometabolic Risk Factors in Childhood Bone Development,Obesity|Cardiovascular Disease|Type 2 Diabetes|Osteoporosis - Augusta University Study,Augusta University,December 2014,"Medical College of Georgia; Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02355717
290,Phase II Pegylated Interferon,Juvenile Pilocytic Astrocytomas|Optic Pathway Gliomas,"Emory University|CURE Childhood Cancer, Inc.",November 2014,"Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02343224
291,Dose-Response Effects of Whole Body Vibration on Spasticity and Walking in SCI,Spinal Cord Injury,"Shepherd Center, Atlanta GA|National Institutes of Health (NIH)",January 2015,"Shepherd Center, Inc., Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02340910
306,Researching Alveolar Macrophage Improvements With Supplements in HIV,HIV-1 Infection,"Emory University|National Institutes of Health (NIH)|National Heart, Lung, and Blood Institute (NHLBI)",October 2014,"Ponce De Leon Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02264860
317,BioEnergetics and Metabolomics in Cystic Fibrosis,Cystic Fibrosis,Emory University|National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK),September 2014,"Emory university Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02225899
318,Steroids in Total Knee Arthroplasty,Postoperative Pain|Inflammation|Osteoarthritis,Emory University,August 2014,"Emory Orthopedic and Spine Hospital, Tucker, Georgia, United States",https://ClinicalTrials.gov/show/NCT02219581
322,Redox Imbalance and the Development of Cystic Fibrosis Diabetes,"Diabetes Mellitus, Type 2|Cystic Fibrosis",Emory University|Cystic Fibrosis Foundation Therapeutics,November 2014,"Children's Healthcare of Atlanta and Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02202876
339,The ISLAND Study: InSuLa Assessed Needs for Depression,Depression,Emory University|National Institute of Mental Health (NIMH),September 2014,"12 Executive Park Drive, 3rd floor, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02137369
349,Endothelin Receptor Function and Acute Stress,Hypertension,"Augusta University|National Heart, Lung, and Blood Institute (NHLBI)",June 2015,"Georgia Regents University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02116335
350,Nitric Oxide Bioavailability and Early Life Stress (NO-Stress),Cardiovascular Disease,"Augusta University|National Heart, Lung, and Blood Institute (NHLBI)",April 2014,"Georgia Prevention Institute , Georgia Regents University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02115724
354,MOSTEGRA TRIAL:MO-(Dified) STE-(nt) GRA(-ft): Surgeon-modified Fenestrated-branched Stent-grafts,Complex Aortic Aneurysms,"Northside Hospital, Inc.",March 2012,"Northside Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02101463
356,Wall Shear Stress and Neointimal Healing Following PCI in Angulated Coronary Vessels,Coronary Artery Disease,Emory University|Medtronic,May 2014,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02098876
385,Changing Developmental Trajectories Through Early Treatment,Autism Spectrum Disorders,Emory University|National Institute of Mental Health (NIMH),May 2013,"Marcus Autism Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01985022
386,DBS for TRD Medtronic Activa PC+S,Treatment Resistant Depression,Emory University|Hope for Depression Research Foundation|The Dana Foundation,September 2013,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01984710
390,Vitamin K and Glucose Metabolism in Children at Risk for Diabetes (Vita-K 'n' Kids Study),Obesity|Insulin Resistance|Insulin Sensitivity|Prediabetes|Dyslipidemia|Diabetes,Augusta University|University of Alabama at Birmingham|Yale University|Tufts University|Nattopharma ASA,September 2013,"Medical College of Georgia; Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01972113
397,Adjuvant Radiation for High Risk Bladder Cancer,Bladder Cancer|Squamous Cell Carcinoma of the Bladder|Stage III Bladder Cancer|Stage IV Bladder Cancer|Transitional Cell Carcinoma of the Bladder,Emory University,July 2013,"Emory University Hospital/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01954173
400,Mechanisms of Intradialytic Hypertension,Renal Failure Chronic Requiring Hemodialysis|Haemodialysis-induced Symptom|Hypertension,Emory University|Satellite Healthcare,September 2013,"Emory Dialysis Clinics, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01947673
409,BMT Abatacept for Non-Malignant Diseases,Hurler Syndrome|Fanconi Anemia|Glanzmann Thrombasthenia|Wiskott-Aldrich Syndrome|Chronic Granulomatous Disease|Severe Congenital Neutropenia|Leukocyte Adhesion Deficiency|Shwachman-Diamond Syndrome|Diamond-Blackfan Anemia|Dyskeratosis-congenita|Chediak-Higashi Syndrome|Severe Aplastic Anemia|Thalassemia Major|Hemophagocytic Lymphohistiocytosis|Sickle Cell Disease,Emory University,January 2014,"Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01917708
436,Effect of Increasing Motor Cortex Inhibition on Task Specific Dystonia,Dystonia,Emory University,February 2013,"Emory University School of Medicine, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01823237
437,DETECT and Retinal Outcomes in Hypertension,Hypertension|Retinal Disorder|Cognitive Impairment,Emory University,November 2012,"Grady Memorial Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01815567
453,The National Amyotrophic Lateral Sclerosis Registry,Amyotrophic Lateral Sclerosis,Centers for Disease Control and Prevention|VA Office of Research and Development|Centers for Medicare and Medicaid Services,October 2010,"CDC, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01772602
469,Hypofractionated Stereotactic Radiosurgery in Treating Patients With Large Brain Metastasis,"Metastatic Malignant Neoplasm to Brain|Unspecified Adult Solid Tumor, Protocol Specific",Emory University,September 2012,"Emory University Hospital/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01705548
478,Stroke Gait Rehabilitation Using Functional Electrical Stimulation,Cerebrovascular Accident,Emory University|Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD)|American Heart Association,August 2013,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01668602
492,Sympathetic Overactivity in Post-traumatic Stress Disorder,Post-traumatic Stress Disorder|Prehypertension,Emory University,July 2012,"Atlanta VA Medical Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT01627301
505,Anti-3-[18F]FACBC Imaging of Parathyroid Adenomas,Parathyroid Disease,"David M. Schuster, MD|Emory University",August 2012,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01574287
595,Immune Responses to Yellow Fever Vaccine,Yellow Fever Vaccine,Emory University|National Institutes of Health (NIH),November 2010,"The Hope clinic of Emory Vaccine Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT01244802
638,Safety and Effectiveness of Cord Blood Stem Cell Infusion for the Treatment of Cerebral Palsy in Children,Cerebral Palsy - Augusta University Study,Augusta University,January 2010,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01072370
712,Emory Latino Diabetes Education Program,Diabetes,Emory University|Sanofi|Eli Lilly and Company|Takeda|Novo Nordisk A/S,October 2008,"Emory University School of Medicine, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT00793884
854,Cardiology Biobank Registry,Cardiovascular Disease,Emory University,December 2003,"Emory School Of Medicine, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT00378924
859,Deep Brain Stimulation for Treatment Resistant Depression,Major Depressive Disorder,Emory University|The Dana Foundation,September 2006,"Emory University School of Medicine, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT00367003
952,Molecular and Cellular Characterization of Cardiac Tissue in Postnatal Development,Congenital Heart Disease|Tetralogy of Fallot,"Emory University|National Heart, Lung, and Blood Institute (NHLBI)",April 2005,"Emory University School of Medicine, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT00243776


sample,clinical_information,source_name,Assay Type,AvgSpotLen,Bases,BioProject,BioSample,Bytes,Center Name,Consent,DATASTORE filetype,DATASTORE provider,DATASTORE region,,Experiment,GEO_Accession (exp),gestational_age,Instrument,LibraryLayout,LibrarySelection,LibrarySource,Organism,Platform,ReleaseDate,Sample Name,SRA Study
PHNPR0003,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0006,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0008,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0009,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0010,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0011,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0014,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0016,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0017,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0018,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0019,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0021,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0023,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0024,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0025,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0026,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0027A,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0027B,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0028,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0029,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0030,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0031,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0032,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0033,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0034,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0035,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0036,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0037,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0038A,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0038B,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0041,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0043,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0006,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0008,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0011,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0012,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0013,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0014,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0015,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0018,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0019,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0020A,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0020B,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0022,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0023,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0024,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0026,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0027,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0028,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0030,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0031,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0032,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0033,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0034A,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0034B,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0035,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0037,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0038,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0039,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0040,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0041,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0042,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0043A,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0043B,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0045,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
SRR10916911,preeclampsia,placenta,RNA-Seq,300,5851500900,PRJNA602315,SAMN13888095,2510035848,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584224,GSM4277245,38.2,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277245,SRP243468
SRR10916912,preeclampsia,placenta,RNA-Seq,300,6033315900,PRJNA602315,SAMN13888094,2603962819,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584225,GSM4277246,37.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277246,SRP243468
SRR10916913,preeclampsia,placenta,RNA-Seq,300,5837922300,PRJNA602315,SAMN13888093,2532024065,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584226,GSM4277247,37.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277247,SRP243468
SRR10916914,preeclampsia,placenta,RNA-Seq,300,5384850600,PRJNA602315,SAMN13888092,2333085166,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584227,GSM4277248,38.4,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277248,SRP243468
SRR10916915,control,placenta,RNA-Seq,300,5875015500,PRJNA602315,SAMN13888091,2528549701,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584228,GSM4277249,37.6,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277249,SRP243468
SRR10916916,control,placenta,RNA-Seq,300,5094186900,PRJNA602315,SAMN13888090,2203909044,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584229,GSM4277250,38.2,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277250,SRP243468
SRR10916917,control,placenta,RNA-Seq,300,6618529800,PRJNA602315,SAMN13888089,2860990328,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584230,GSM4277251,38.4,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277251,SRP243468
SRR10916918,control,placenta,RNA-Seq,300,5810447100,PRJNA602315,SAMN13888088,2535489561,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584231,GSM4277252,38.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277252,SRP243468
SRR11498040,preeclampsia,Placenta,RNA-Seq,250,5228652000,PRJNA623568,SAMN14549360,2030883717,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073871,GSM4458411,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458411,SRP255609
SRR11498041,preeclampsia,Placenta,RNA-Seq,250,5841145500,PRJNA623568,SAMN14549359,2060468456,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073872,GSM4458412,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458412,SRP255609
SRR11498042,preeclampsia,Placenta,RNA-Seq,250,6134030000,PRJNA623568,SAMN14549358,2156037998,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073873,GSM4458413,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458413,SRP255609
SRR11498043,preeclampsia,Placenta,RNA-Seq,250,5857029000,PRJNA623568,SAMN14549357,2215784380,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073874,GSM4458414,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458414,SRP255609
SRR11498044,preeclampsia,Placenta,RNA-Seq,250,8260164000,PRJNA623568,SAMN14549356,2899528981,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073875,GSM4458415,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458415,SRP255609
SRR11498045,preeclampsia,Placenta,RNA-Seq,250,5756372750,PRJNA623568,SAMN14549355,2146283280,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073876,GSM4458416,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458416,SRP255609
SRR11498046,preeclampsia,Placenta,RNA-Seq,250,8774353750,PRJNA623568,SAMN14549354,3307261673,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073877,GSM4458417,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458417,SRP255609
SRR11498047,preeclampsia,Placenta,RNA-Seq,250,7575094250,PRJNA623568,SAMN14549353,2946094556,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073878,GSM4458418,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458418,SRP255609
SRR11498048,control,Placenta,RNA-Seq,250,6315704250,PRJNA623568,SAMN14549352,2388050889,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073879,GSM4458419,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458419,SRP255609
SRR11498049,control,Placenta,RNA-Seq,250,5234651000,PRJNA623568,SAMN14549351,2145819426,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073880,GSM4458420,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458420,SRP255609
SRR11498050,control,Placenta,RNA-Seq,250,5441768500,PRJNA623568,SAMN14549350,1912215837,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073881,GSM4458421,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458421,SRP255609
SRR11498051,control,Placenta,RNA-Seq,250,5248079500,PRJNA623568,SAMN14549349,1847537049,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073882,GSM4458422,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458422,SRP255609
SRR11498052,control,Placenta,RNA-Seq,250,5213271250,PRJNA623568,SAMN14549348,1859924155,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073883,GSM4458423,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458423,SRP255609
SRR11498053,control,Placenta,RNA-Seq,250,5175471250,PRJNA623568,SAMN14549347,1840323120,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073884,GSM4458424,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458424,SRP255609
SRR11498054,control,Placenta,RNA-Seq,250,5430952000,PRJNA623568,SAMN14549342,1911059637,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073885,GSM4458425,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458425,SRP255609
SRR11498055,control,Placenta,RNA-Seq,250,6592196750,PRJNA623568,SAMN14549341,2511179244,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073886,GSM4458426,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458426,SRP255609
SRR11498056,control,Placenta,RNA-Seq,250,7224091250,PRJNA623568,SAMN14549340,2705017283,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073887,GSM4458427,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458427,SRP255609
SRR11498057,control,Placenta,RNA-Seq,250,6361553750,PRJNA623568,SAMN14549346,2386401940,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073888,GSM4458428,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458428,SRP255609
SRR11498058,control,Placenta,RNA-Seq,250,5969768500,PRJNA623568,SAMN14549345,2218972389,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073889,GSM4458429,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458429,SRP255609
SRR11498059,control,Placenta,RNA-Seq,250,5862383500,PRJNA623568,SAMN14549344,2176535488,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073890,GSM4458430,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458430,SRP255609
SRR11498060,control,Placenta,RNA-Seq,250,5819301500,PRJNA623568,SAMN14549343,2191984914,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073891,GSM4458431,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458431,SRP255609
SRR11498061,control,Placenta,RNA-Seq,250,5334998000,PRJNA623568,SAMN14549339,2020553197,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073892,GSM4458432,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458432,SRP255609
SRR11498062,control,Placenta,RNA-Seq,250,7016941250,PRJNA623568,SAMN14549338,2624634563,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073893,GSM4458433,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458433,SRP255609
SRR11498063,control,Placenta,RNA-Seq,250,6992219750,PRJNA623568,SAMN14549337,2679010079,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073894,GSM4458434,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458434,SRP255609
SRR11498064,control,Placenta,RNA-Seq,250,8406434750,PRJNA623568,SAMN14549336,3274479182,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073895,GSM4458435,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458435,SRP255609
SRR11498065,control,Placenta,RNA-Seq,250,6372816000,PRJNA623568,SAMN14549335,2308349042,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073896,GSM4458436,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458436,SRP255609
SRR11498066,control,Placenta,RNA-Seq,250,5721086500,PRJNA623568,SAMN14549334,2081096448,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073897,GSM4458437,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458437,SRP255609
SRR11498067,control,Placenta,RNA-Seq,250,6320706250,PRJNA623568,SAMN14549333,2309138769,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073898,GSM4458438,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458438,SRP255609
SRR11498068,control,Placenta,RNA-Seq,250,6129292000,PRJNA623568,SAMN14549332,2223234786,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073899,GSM4458439,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458439,SRP255609
SRR11498069,control,Placenta,RNA-Seq,250,7914199250,PRJNA623568,SAMN14549331,2985305823,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073900,GSM4458440,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458440,SRP255609
SRR11498070,control,Placenta,RNA-Seq,250,10292518250,PRJNA623568,SAMN14549330,3881011504,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073901,GSM4458441,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458441,SRP255609
SRR11498071,control,Placenta,RNA-Seq,250,5258229500,PRJNA623568,SAMN14549412,1979383915,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073902,GSM4458442,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458442,SRP255609
SRR11498072,control,Placenta,RNA-Seq,250,5573051750,PRJNA623568,SAMN14549411,2036568739,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073903,GSM4458443,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458443,SRP255609
SRR11498073,control,Placenta,RNA-Seq,250,5084821500,PRJNA623568,SAMN14549410,1871457545,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073904,GSM4458444,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458444,SRP255609
SRR11498074,control,Placenta,RNA-Seq,250,6162808500,PRJNA623568,SAMN14549409,2276896798,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073905,GSM4458445,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458445,SRP255609
SRR11498075,control,Placenta,RNA-Seq,250,6505293000,PRJNA623568,SAMN14549408,2407887150,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073906,GSM4458446,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458446,SRP255609
SRR11498076,control,Placenta,RNA-Seq,250,6345172250,PRJNA623568,SAMN14549407,2369771884,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073907,GSM4458447,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458447,SRP255609
SRR11498077,control,Placenta,RNA-Seq,250,5411214250,PRJNA623568,SAMN14549406,2006719456,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073908,GSM4458448,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458448,SRP255609
SRR11498078,control,Placenta,RNA-Seq,250,6276562500,PRJNA623568,SAMN14549405,2407767646,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073909,GSM4458449,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458449,SRP255609
SRR11498079,control,Placenta,RNA-Seq,250,7387090250,PRJNA623568,SAMN14549404,2781772751,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073910,GSM4458450,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458450,SRP255609


contentType,title,abstract,affiliations,authorization,authors,citation_text,count_accesses,count_altmetric,count_citations,documentType,doi,doi_url,focus,issue,journal_pcode,journal_title,publishedAt,publishedAtString,subjects,url,volume
editorial,Keep it simple?,,[],True,[],"Keep it simple?. Nature Phys7, 441 (2011).",464,0,0,aplusplus,10.1038/nphys2024,https://doi.org/10.1038/nphys2024,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2024,7
thesis,Geometric intuition,,[],True,"[""Mark Buchanan""]","Buchanan, M. Geometric intuition. Nature Phys7, 442 (2011).",378,1,7,aplusplus,10.1038/nphys2011,https://doi.org/10.1038/nphys2011,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2011,7
books & arts,Inside quantum information,,[],False,"[""Andreas Trabesinger""]","Trabesinger, A. Inside quantum information. Nature Phys7, 443–444 (2011).",13,1,0,aplusplus,10.1038/nphys2020,https://doi.org/10.1038/nphys2020,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2020,7
books & arts,From nowhere to everywhere,,[],False,"[""Peter Rodgers""]","Rodgers, P. From nowhere to everywhere. Nature Phys7, 444–445 (2011).",11,0,0,aplusplus,10.1038/nphys2017,https://doi.org/10.1038/nphys2017,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2017,7
research highlights,Our choice from the recent literature,,[],True,[],"Our choice from the recent literature. Nature Phys7, 446 (2011).",21,0,0,aplusplus,10.1038/nphys2023,https://doi.org/10.1038/nphys2023,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2023,7
news & views,Quantum bouncing ball resonates,,[],True,"[""Geoffrey L. Greene""]","Greene, G. Quantum bouncing ball resonates. Nature Phys7, 447–448 (2011).",47,3,1,aplusplus,10.1038/nphys1990,https://doi.org/10.1038/nphys1990,,6,nphys,nature physics,1302998400,2011-04-17,,https://www.nature.com/articles/nphys1990,7
news & views,Coherence in photosynthesis,,[],True,"[""Gregory D. Scholes""]","Scholes, G. Coherence in photosynthesis. Nature Phys7, 448–449 (2011).",232,0,22,aplusplus,10.1038/nphys2013,https://doi.org/10.1038/nphys2013,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2013,7
news & views,Stout fizz-ics,,[],True,"[""Ed Gerstner""]","Gerstner, E. Stout fizz-ics. Nature Phys7, 449 (2011).",133,0,5,aplusplus,10.1038/nphys2019,https://doi.org/10.1038/nphys2019,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2019,7
news & views,A bit of both,,[],True,"[""Smitha Vishveshwara""]","Vishveshwara, S. A bit of both. Nature Phys7, 450–451 (2011).",92,0,8,aplusplus,10.1038/nphys2014,https://doi.org/10.1038/nphys2014,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2014,7
news & views,Energy dissipation in extreme cold,,[],True,"[""Yuri Sergeev""]","Sergeev, Y. Energy dissipation in extreme cold. Nature Phys7, 451–452 (2011).",25,0,4,aplusplus,10.1038/nphys2015,https://doi.org/10.1038/nphys2015,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2015,7
news & views,Check with the BOSS,,[],True,"[""May Chiao""]","Chiao, M. Check with the BOSS. Nature Phys7, 453 (2011).",13,0,0,aplusplus,10.1038/nphys2018,https://doi.org/10.1038/nphys2018,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2018,7
news & views,The sense of colour centres,,[],True,"[""Dmitry Budker""]","Budker, D. The sense of colour centres. Nature Phys7, 453–454 (2011).",74,0,6,aplusplus,10.1038/nphys1989,https://doi.org/10.1038/nphys1989,,6,nphys,nature physics,1302998400,2011-04-17,,https://www.nature.com/articles/nphys1989,7
letter,Phase-fluctuating superconductivity in overdoped La2−xSrxCuO4,,[],True,"[""Patrick M. C. Rourke"", ""Ioanna Mouzopoulou"", ""Xiaofeng Xu"", ""Christos Panagopoulos"", ""Yue Wang"", ""Baptiste Vignolle"", ""Cyril Proust"", ""Evgenia V. Kurganova"", ""Uli Zeitler"", ""Yoichi Tanabe"", ""Tadashi Adachi"", ""Yoji Koike"", ""Nigel E. Hussey""]","Rourke, P., Mouzopoulou, I., Xu, X. et al. Phase-fluctuating superconductivity in overdoped La2−xSrxCuO4. Nature Phys7, 455–458 (2011).",654,0,43,aplusplus,10.1038/nphys1945,https://doi.org/10.1038/nphys1945,,6,nphys,nature physics,1299974400,2011-03-13,,https://www.nature.com/articles/nphys1945,7
letter,Electric-field sensing using single diamond spins,,[],True,"[""F. Dolde"", ""H. Fedder"", ""M. W. Doherty"", ""T. N\u00f6bauer"", ""F. Rempp"", ""G. Balasubramanian"", ""T. Wolf"", ""F. Reinhard"", ""L. C. L. Hollenberg"", ""F. Jelezko"", ""J. Wrachtrup""]","Dolde, F., Fedder, H., Doherty, M. et al. Electric-field sensing using single diamond spins. Nature Phys7, 459–463 (2011).",5685,23,603,aplusplus,10.1038/nphys1969,https://doi.org/10.1038/nphys1969,,6,nphys,nature physics,1302998400,2011-04-17,,https://www.nature.com/articles/nphys1969,7
letter,Probing collective multi-electron dynamics in xenon with high-harmonic spectroscopy,,[],True,"[""A. D. Shiner"", ""B. E. Schmidt"", ""C. Trallero-Herrero"", ""H. J. W\u00f6rner"", ""S. Patchkovskii"", ""P. B. Corkum"", ""J-C. Kieffer"", ""F. L\u00e9gar\u00e9"", ""D. M. Villeneuve""]","Shiner, A., Schmidt, B., Trallero-Herrero, C. et al. Probing collective multi-electron dynamics in xenon with high-harmonic spectroscopy. Nature Phys7, 464–467 (2011).",1126,0,245,aplusplus,10.1038/nphys1940,https://doi.org/10.1038/nphys1940,,6,nphys,nature physics,1299369600,2011-03-06,,https://www.nature.com/articles/nphys1940,7
letter,Realization of a gravity-resonance-spectroscopy technique,,[],True,"[""Tobias Jenke"", ""Peter Geltenbort"", ""Hartmut Lemmel"", ""Hartmut Abele""]","Jenke, T., Geltenbort, P., Lemmel, H. et al. Realization of a gravity-resonance-spectroscopy technique. Nature Phys7, 468–472 (2011).",945,22,105,aplusplus,10.1038/nphys1970,https://doi.org/10.1038/nphys1970,,6,nphys,nature physics,1302998400,2011-04-17,,https://www.nature.com/articles/nphys1970,7
letter,Direct measurement of the energy dissipated by quantum turbulence,,[],True,"[""D. I. Bradley"", ""S. N. Fisher"", ""A. M. Gu\u00e9nault"", ""R. P. Haley"", ""G. R. Pickett"", ""D. Potts"", ""V. Tsepelin""]","Bradley, D., Fisher, S., Guénault, A. et al. Direct measurement of the energy dissipated by quantum turbulence. Nature Phys7, 473–476 (2011).",249,0,38,aplusplus,10.1038/nphys1963,https://doi.org/10.1038/nphys1963,,6,nphys,nature physics,1301788800,2011-04-03,,https://www.nature.com/articles/nphys1963,7
letter,Separating stretching from folding in fluid mixing,,[],True,"[""Douglas H. Kelley"", ""Nicholas T. Ouellette""]","Kelley, D., Ouellette, N. Separating stretching from folding in fluid mixing. Nature Phys7, 477–480 (2011).",451,0,33,aplusplus,10.1038/nphys1941,https://doi.org/10.1038/nphys1941,,6,nphys,nature physics,1299369600,2011-03-06,,https://www.nature.com/articles/nphys1941,7
letter,Dimension of spatially embedded networks,,[],True,"[""Li Daqing"", ""Kosmas Kosmidis"", ""Armin Bunde"", ""Shlomo Havlin""]","Daqing, L., Kosmidis, K., Bunde, A. et al. Dimension of spatially embedded networks. Nature Phys7, 481–484 (2011).",1042,4,152,aplusplus,10.1038/nphys1932,https://doi.org/10.1038/nphys1932,,6,nphys,nature physics,1298764800,2011-02-27,,https://www.nature.com/articles/nphys1932,7
article,Consistent model of magnetism in ferropnictides,"<p>The discovery of superconductivity in LaFeAsO introduced ferropnictides as a new class of superconducting compounds with critical temperatures second only to those of the cuprates. Although the presence of iron makes the ferropnictides radically different from the cuprates, antiferromagnetism in the parent compounds suggests that superconductivity and magnetism are interrelated in both of them. However, the character of magnetic interactions and spin fluctuations in ferropnictides is not reasonably described by conventional models of magnetism. Here we show that the most puzzling features can be naturally reconciled within a rather simple effective spin model with a biquadratic interaction, which is consistent with electronic structure calculations. By going beyond the Heisenberg model, our description explains numerous experimental observations, including the peculiarities of the spin-wave spectrum, thin domain walls and crossover from a first- to second-order phase transition under doping. The model also offers insight into the occurrence of the nematic phase above the antiferromagnetic phase transition.</p>",[],False,"[""Aleksander L. Wysocki"", ""Kirill D. Belashchenko"", ""Vladimir P. Antropov""]","Wysocki, A., Belashchenko, K. & Antropov, V. Consistent model of magnetism in ferropnictides. Nature Phys7, 485–489 (2011).",338,0,116,aplusplus,10.1038/nphys1933,https://doi.org/10.1038/nphys1933,,6,nphys,nature physics,1299369600,2011-03-06,,https://www.nature.com/articles/nphys1933,7
article,Floquet topological insulator in semiconductor quantum wells,"<p>Topological phases of matter have captured our imagination over the past few years, with tantalizing properties such as robust edge modes and exotic non-Abelian excitations, and potential applications ranging from semiconductor spintronics to topological quantum computation. Despite recent advancements in the field, our ability to control topological transitions remains limited, and usually requires changing material or structural properties. We show, using Floquet theory, that a topological state can be induced in a semiconductor quantum well, initially in the trivial phase. This can be achieved by irradiation with microwave frequencies, without changing the well structure, closing the gap and crossing the phase transition. We show that the quasi-energy spectrum exhibits a single pair of helical edge states. We discuss the necessary experimental parameters for our proposal. This proposal provides an example and a proof of principle of a new non-equilibrium topological state, the Floquet topological insulator, introduced in this paper.</p>",[],False,"[""Netanel H. Lindner"", ""Gil Refael"", ""Victor Galitski""]","Lindner, N., Refael, G. & Galitski, V. Floquet topological insulator in semiconductor quantum wells. Nature Phys7, 490–495 (2011).",4828,7,945,aplusplus,10.1038/nphys1926,https://doi.org/10.1038/nphys1926,,6,nphys,nature physics,1299974400,2011-03-13,,https://www.nature.com/articles/nphys1926,7
article,Time-resolved measurement of spin-transfer-driven ferromagnetic resonance and spin torque in magnetic tunnel junctions,"<p>The bias dependence of the torque that a spin-polarized current exerts on ferromagnetic elements is important for understanding fundamental spin physics in magnetic devices and for applications. Several experimental techniques have been introduced in recent years in attempts to measure spin-transfer torque in magnetic tunnel junctions. However, these techniques have provided only indirect measures of the torque and their results regarding bias dependence are qualitatively and quantitatively inconsistent. Here we demonstrate that spin torque in magnetic tunnel junctions can be measured directly by using time-domain techniques to detect resonant magnetic precession in response to an oscillating spin torque. The technique is accurate in the high-bias regime relevant for applications, and because it detects directly small-angle linear-response magnetic dynamics caused by spin torque it is relatively immune to artefacts affecting competing techniques. At high bias we find that the spin-torque vector differs markedly from the simple lowest-order Taylor series approximations commonly&#160;assumed.</p>",[],False,"[""Chen Wang"", ""Yong-Tao Cui"", ""Jordan A. Katine"", ""Robert A. Buhrman"", ""Daniel C. Ralph""]","Wang, C., Cui, YT., Katine, J. et al. Time-resolved measurement of spin-transfer-driven ferromagnetic resonance and spin torque in magnetic tunnel junctions. Nature Phys7, 496–501 (2011).",529,6,91,aplusplus,10.1038/nphys1928,https://doi.org/10.1038/nphys1928,,6,nphys,nature physics,1298764800,2011-02-27,,https://www.nature.com/articles/nphys1928,7
article,Controlling the quantum stereodynamics of ultracold bimolecular reactions,"<p>Molecular collisions in the quantum regime represent a new opportunity to explore chemical reactions. Recently, atom-exchangereactions were observed in a trapped ultracold gas of KRb molecules. In an external electric field, these polar molecules can easily be oriented and the exothermic and barrierless bimolecular reactions, KRb+KRb&#8594;K<sub>2</sub>+Rb<sub>2</sub>, occur at a rate that rises steeply with increasing dipole moment. Here we demonstrate the suppression of the bimolecular chemical reaction rate by nearly two orders of magnitude when we use an optical lattice trap to confine the fermionic polar molecules in a quasi-two-dimensional, pancake-like geometry, with the dipoles oriented along the tight confinement direction. With the combination of sufficiently tight confinement and Fermi statistics of the molecules, two polar molecules can approach each other only in a &#8216;side-by-side&#8217; collision under repulsive dipole&#8211;dipole interactions. The suppression of chemical reactions is a prerequisite for the realization of new molecule-based quantum systems.</p>",[],False,"[""M. H. G. de Miranda"", ""A. Chotia"", ""B. Neyenhuis"", ""D. Wang"", ""G. Qu\u00e9m\u00e9ner"", ""S. Ospelkaus"", ""J. L. Bohn"", ""J. Ye"", ""D. S. Jin""]","de Miranda, M., Chotia, A., Neyenhuis, B. et al. Controlling the quantum stereodynamics of ultracold bimolecular reactions. Nature Phys7, 502–507 (2011).",838,0,333,aplusplus,10.1038/nphys1939,https://doi.org/10.1038/nphys1939,,6,nphys,nature physics,1300579200,2011-03-20,,https://www.nature.com/articles/nphys1939,7
article,Random walks with barriers,"<p>Restrictions to molecular motion by barriers (membranes) are ubiquitous in porous media, composite materials and biological tissues. A major challenge is to characterize the microstructure of a material or an organism non-destructively using a bulk transport measurement. Here we demonstrate how the long-range structural correlations introduced by permeable membranes give rise to distinct features of transport. We consider Brownian motion restricted by randomly placed and oriented membranes (d&#8722;1-dimensional planes in d dimensions) and focus on the disorder-averaged diffusion propagator using a scattering approach. The renormalization group solution reveals a scaling behaviour of the diffusion coefficient for large times, with a characteristically slow inverse square root time dependence for any d. Its origin lies in the strong structural fluctuations introduced by the spatially extended random restrictions, representing a new universality class of the structural disorder. Our results agree well with Monte Carlo simulations in two dimensions. They can be used to identify permeable barriers as restrictions to transport, and to quantify their permeability and surface area.</p>",[],False,"[""Dmitry S. Novikov"", ""Els Fieremans"", ""Jens H. Jensen"", ""Joseph A. Helpern""]","Novikov, D., Fieremans, E., Jensen, J. et al. Random walks with barriers. Nature Phys7, 508–514 (2011).",546,0,128,aplusplus,10.1038/nphys1936,https://doi.org/10.1038/nphys1936,,6,nphys,nature physics,1299369600,2011-03-06,,https://www.nature.com/articles/nphys1936,7


patient_id,specimen_id,status,specimen_type_display,specimen_datetime,organism_code,organism_display_name,organism_id,drug_id,drug_display_name,rsi_code
99999999999,CCC2,,MRSA Screen,2017-02-14,NA,No growth,2300967,NA,NA,NA
99999999999,CCC1,,Blood Culture,2017-02-13,NA,No growth,2365356,NA,NA,NA
99999999999,BBB8,,MRSA Screen,2016-01-12,NA,No growth,2284807,NA,NA,NA
99999999999,BBB7,,Faeces,2016-05-27,NA,No growth,2392702,NA,NA,NA
99999999999,BBB6,,Urine,2015-04-11,NA,No growth,1960554,NA,NA,NA
99999999999,BBB5,,Blood Culture,2015-07-08,NA,No growth,2110922,NA,NA,NA
99999999999,BBB4,,MRSA Screen,2015-07-08,NA,No growth,2015253,NA,NA,NA
99999999999,BBB3,,MRSA Screen,2015-05-15,NA,No growth,1996884,NA,NA,NA
99999999999,BBB2,,MRSA Screen,2015-03-05,NA,No growth,1994380,NA,NA,NA
99999999999,BBB1,,Urine,2015-03-25,NA,No growth,1770706,NA,NA,NA
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Amp,Ampicillin,R
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Aug,Co-amoxiclav,R
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Caz,Ceftazidime,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Cet,Cefotaxime,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Cip,Ciprofloxacin,R
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Clx,Cefalexin,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Cxm,Cefuroxime,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Ert,Ertapenem,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Fos,Fosfomycin,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Gen,Gentamicin,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Mer,Meropenem,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Nit,Nitrofurantoin,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Taz,Piperacillin + Tazobactam,R
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Tri,Trimethoprim,R
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Amp,Ampicillin,R
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Aug,Co-amoxiclav,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Caz,Ceftazidime,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Cet,Cefotaxime,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Cip,Ciprofloxacin,R
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Clx,Cefalexin,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Cxm,Cefuroxime,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Ert,Ertapenem,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Fos,Fosfomycin,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Gen,Gentamicin,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Mer,Meropenem,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Nit,Nitrofurantoin,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Taz,Piperacillin + Tazobactam,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Tri,Trimethoprim,R

organism, All Antimicrobials,amikacin,amoxicillin_clavulanicacid,ampicillin,ampicillin_sulbactum,cefaperazone_sulbactum,cefexime,cefotaxime,cefoxitin,ceftazidime,ceftazidime_clavalunicacid,ceftriaxone,chloramphenicol,ciprofloxacin,colistin,cotrimoxazole,ertapenem,erythromycin,gentamicin_highlevel,imipenem,levofloxacin,linezolid,meropenem,netilmicin,nitrofurantoin,penicillin,piperacillin_tazobactum,rifampicin,teicoplanin,tetracycline,ticarcillin_clavulanicacid,tigecycline,vancomycin
acinetobacter,254,7,3,0,0,117,0,7,0,5,0,0,1,9,53,0,0,0,0,14,0,0,20,3,0,0,13,0,0,0,0,2,0
citrobacter,18,1,0,0,0,2,0,1,0,1,0,0,0,1,3,0,0,0,0,3,0,0,2,1,0,0,3,0,0,0,0,0,0
coagulase negative staphylococcus,80,6,7,0,0,0,0,0,6,0,0,0,0,5,0,6,0,1,0,0,0,13,0,10,0,1,0,0,12,0,0,0,13
enterobacter,73,8,2,0,0,11,0,5,0,3,0,0,0,9,5,0,0,0,0,8,0,0,7,4,1,0,10,0,0,0,0,0,0
enterococcus,35,1,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,1,1,1,0,10,1,0,2,2,1,0,6,1,0,0,6
escherichia,206,26,2,0,0,20,0,3,0,3,0,0,7,3,30,0,0,0,0,42,0,0,29,22,3,0,13,0,0,0,0,3,0
klebsiella,321,25,8,0,0,33,0,11,0,13,0,0,5,24,57,0,0,0,0,53,0,0,36,18,2,0,29,0,0,1,0,5,1
methicillin sensitive staphylococcus aureus(mssa),7,1,0,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,0,0,0,1,0,0,0,0,0,0,1,0,0,0,1
pseudomonas,726,90,2,0,0,123,0,5,0,93,0,0,1,94,53,1,0,0,0,79,0,0,75,6,0,0,104,0,0,0,0,0,0
serratia marcescens,17,2,0,0,0,2,1,1,0,2,0,0,0,2,1,0,0,0,0,2,0,0,2,0,0,0,2,0,0,0,0,0,0
staphyloccus hemolyticus (ms-cons),19,2,2,0,0,0,0,0,2,0,0,0,0,2,0,2,0,0,0,0,0,2,0,2,0,1,0,0,2,0,0,0,2
staphylococcus aureus,101,13,3,0,0,0,0,0,11,0,0,0,0,3,0,11,0,4,0,0,0,13,0,13,0,2,0,4,12,0,0,0,12
staphylococcus aureus(mssa),24,3,3,0,0,0,0,0,3,0,0,0,0,0,0,1,0,1,0,0,0,3,0,3,0,1,0,0,3,0,0,0,3
staphylococcus epidermidis,16,1,1,0,0,0,0,0,2,0,0,0,0,2,0,0,0,1,0,0,0,2,0,1,0,2,0,0,2,0,0,0,2
stenotnophomonas maltophilia,6,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,2,0,0,0,0,0,1,0,0,0,1,0,0


root,component,points,ontology,depth
F00,Dementia in Alzheimer's disease,7.1,ICD10_UMLS,0
G81,Hemiplegia,4.4,ICD10_UMLS,0
G30,Alzheimer's disease,4,ICD10_UMLS,0
I69,Sequelae of cerebrovascular disease (secondary codes),3.7,ICD10_UMLS,0
R29,Other symptoms and signs involving the nervous and musculoskeletal systems (R29.6 Tendency to fall),3.6,ICD10_UMLS,0
N39,Other disorders of urinary system (includes urinary tract infection and urinary incontinence),3.2,ICD10_UMLS,0
F05,"Delirium, not induced by alcohol and other psychoactive substances",3.2,ICD10_UMLS,0
W19,Unspecified fall,3.2,ICD10_UMLS,0
S00,Superficial injury of head,3.2,ICD10_UMLS,0
R31,Unspecified haematuria,3,ICD10_UMLS,0
B96,Other bacterial agents as the cause of diseases classified to other chapters (secondary code),2.9,ICD10_UMLS,0
R41,Other symptoms and signs involving cognitive functions and awareness,2.7,ICD10_UMLS,0
R26,Abnormalities of gait and mobility,2.6,ICD10_UMLS,0
I67,Other cerebrovascular diseases,2.6,ICD10_UMLS,0
R56,"Convulsions, not elsewhere classified",2.6,ICD10_UMLS,0
R40,"Somnolence, stupor and coma",2.5,ICD10_UMLS,0
T83,"Complications of genitourinary prosthetic devices, implants and grafts",2.4,ICD10_UMLS,0
S06,Intracranial injury,2.4,ICD10_UMLS,0
S42,Fracture of shoulder and upper arm,2.3,ICD10_UMLS,0
E87,"Other disorders of fluid, electrolyte and acid-base balance",2.3,ICD10_UMLS,0
M25,"Other joint disorders, not elsewhere classified",2.3,ICD10_UMLS,0
E86,Volume depletion,2.3,ICD10_UMLS,0
R54,Senility,2.2,ICD10_UMLS,0
Z50,Care involving use of rehabilitation procedures,2.1,ICD10_UMLS,0
F03,Unspecified dementia,2.1,ICD10_UMLS,0
W18,Other fall on same level,2.1,ICD10_UMLS,0
Z75,Problems related to medical facilities and other health care,2,ICD10_UMLS,0
F01,Vascular dementia,2,ICD10_UMLS,0
S80,Superficial injury of lower leg,2,ICD10_UMLS,0
L03,Cellulitis,2,ICD10_UMLS,0
H54,Blindness and low vision,1.9,ICD10_UMLS,0
E53,Deficiency of other B group vitamins,1.9,ICD10_UMLS,0
Z60,Problems related to social environment,1.8,ICD10_UMLS,0
G20,Parkinson's disease,1.8,ICD10_UMLS,0
R55,Syncope and collapse,1.8,ICD10_UMLS,0
S22,"Fracture of rib(s), sternum and thoracic spine",1.8,ICD10_UMLS,0
K59,Other functional intestinal disorders,1.8,ICD10_UMLS,0
N17,Acute renal failure,1.8,ICD10_UMLS,0
L89,Decubitus ulcer,1.7,ICD10_UMLS,0
Z22,Carrier of infectious disease,1.7,ICD10_UMLS,0
B95,Streptococcus and staphylococcus as the cause of diseases classified to other chapters,1.7,ICD10_UMLS,0
L97,"Ulcer of lower limb, not elsewhere classified",1.6,ICD10_UMLS,0
R44,Other symptoms and signs involving general sensations and perceptions,1.6,ICD10_UMLS,0
K26,Duodenal ulcer,1.6,ICD10_UMLS,0
I95,Hypotension,1.6,ICD10_UMLS,0
N19,Unspecified renal failure,1.6,ICD10_UMLS,0
A41,Other septicaemia,1.6,ICD10_UMLS,0
Z87,Personal history of other diseases and conditions,1.5,ICD10_UMLS,0
J96,"Respiratory failure, not elsewhere classified",1.5,ICD10_UMLS,0
X59,Exposure to unspecified factor,1.5,ICD10_UMLS,0
M19,Other arthrosis,1.5,ICD10_UMLS,0
G40,Epilepsy,1.5,ICD10_UMLS,0
M81,Osteoporosis without pathological fracture,1.4,ICD10_UMLS,0
S72,Fracture of femur,1.4,ICD10_UMLS,0
S32,Fracture of lumbar spine and pelvis,1.4,ICD10_UMLS,0
E16,Other disorders of pancreatic internal secretion,1.4,ICD10_UMLS,0
R94,Abnormal results of function studies,1.4,ICD10_UMLS,0
N18,Chronic renal failure,1.4,ICD10_UMLS,0
R33,Retention of urine,1.3,ICD10_UMLS,0
R69,Unknown and unspecified causes of morbidity,1.3,ICD10_UMLS,0
N28,"Other disorders of kidney and ureter, not elsewhere classified",1.3,ICD10_UMLS,0
R32,Unspecified urinary incontinence,1.2,ICD10_UMLS,0
G31,"Other degenerative diseases of nervous system, not elsewhere classified",1.2,ICD10_UMLS,0
Y95,Nosocomial condition,1.2,ICD10_UMLS,0
S09,Other and unspecified injuries of head,1.2,ICD10_UMLS,0
R45,Symptoms and signs involving emotional state,1.2,ICD10_UMLS,0
G45,Transient cerebral ischaemic attacks and related syndromes,1.2,ICD10_UMLS,0
Z74,Problems related to care-provider dependency,1.1,ICD10_UMLS,0
M79,"Other soft tissue disorders, not elsewhere classified",1.1,ICD10_UMLS,0
W06,Fall involving bed,1.1,ICD10_UMLS,0
S01,Open wound of head,1.1,ICD10_UMLS,0
A04,Other bacterial intestinal infections,1.1,ICD10_UMLS,0
A09,Diarrhoea and gastroenteritis of presumed infectious origin,1.1,ICD10_UMLS,0
J18,"Pneumonia, organism unspecified",1.1,ICD10_UMLS,0
J69,Pneumonitis due to solids and liquids,1,ICD10_UMLS,0
R47,"Speech disturbances, not elsewhere classified",1,ICD10_UMLS,0
E55,Vitamin D deficiency,1,ICD10_UMLS,0
Z93,Artificial opening status,1,ICD10_UMLS,0
R02,"Gangrene, not elsewhere classified",1,ICD10_UMLS,0
R63,Symptoms and signs concerning food and fluid intake,0.9,ICD10_UMLS,0
H91,Other hearing loss,0.9,ICD10_UMLS,0
W10,Fall on and from stairs and steps,0.9,ICD10_UMLS,0
W01,"Fall on same level from slipping, tripping and stumbling",0.9,ICD10_UMLS,0
E05,Thyrotoxicosis [hyperthyroidism],0.9,ICD10_UMLS,0
M41,Scoliosis,0.9,ICD10_UMLS,0
R13,Dysphagia,0.8,ICD10_UMLS,0
Z99,Dependence on enabling machines and devices,0.8,ICD10_UMLS,0
U80,Agent resistant to penicillin and related antibiotics,0.8,ICD10_UMLS,0
M80,Osteoporosis with pathological fracture,0.8,ICD10_UMLS,0
K92,Other diseases of digestive system,0.8,ICD10_UMLS,0
I63,Cerebral Infarction,0.8,ICD10_UMLS,0
N20,Calculus of kidney and ureter,0.7,ICD10_UMLS,0
F10,Mental and behavioural disorders due to use of alcohol,0.7,ICD10_UMLS,0
Y84,Other medical procedures as the cause of abnormal reaction of the patient,0.7,ICD10_UMLS,0
R00,Abnormalities of heart beat,0.7,ICD10_UMLS,0
J22,Unspecified acute lower respiratory infection,0.7,ICD10_UMLS,0
Z73,Problems related to life-management difficulty,0.6,ICD10_UMLS,0
R79,Other abnormal findings of blood chemistry,0.6,ICD10_UMLS,0
Z91,"Personal history of risk-factors, not elsewhere classified",0.5,ICD10_UMLS,0
S51,Open wound of forearm,0.5,ICD10_UMLS,0
F32,Depressive episode,0.5,ICD10_UMLS,0
M48,Spinal stenosis (secondary code only),0.5,ICD10_UMLS,0
E83,Disorders of mineral metabolism,0.4,ICD10_UMLS,0
M15,Polyarthrosis,0.4,ICD10_UMLS,0
D64,Other anaemias,0.4,ICD10_UMLS,0
L08,Other local infections of skin and subcutaneous tissue,0.4,ICD10_UMLS,0
R11,Nausea and vomiting,0.3,ICD10_UMLS,0
K52,Other noninfective gastroenteritis and colitis,0.3,ICD10_UMLS,0
R50,Fever of unknown origin,0.1,ICD10_UMLS,0

id,occurrenceID,samplingProtocol,organismName,basisOfRecord,decimalLatitude,decimalLongitude,eventDate,geodeticDatum,lifeStage,occurrenceRemarks,reproductiveCondition,sex,scientificName,scientificNameID,taxonRank,datasetID,license
F53:capture1,F53:capture1,capture,F53,HumanObservation,38.2853475,-112.0255436,2014-02-11T00:00:00.000+00:00,WGS84,adult,,reproductive w/1+ dependent cub,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:recovery1,F53:recovery1,bio-logging sensor recovery,F53,HumanObservation,38.4398889,-111.9790506,2014-11-05T00:00:00.000+00:00T,WGS84,adult,Collar removed. Alive at the time of collar recovery.,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IdCoy_P3_1:capture1,IdCoy_P3_1:capture1,capture,IdCoy_P3_1,HumanObservation,43.805269310754184,-112.7119061888433,2004-12-27T00:00:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IdCoy_P3_1:recovery1,IdCoy_P3_1:recovery1,bio-logging sensor recovery,IdCoy_P3_1,HumanObservation,43.81886351026955,-112.70294808352044,2005-02-04T23:59:00.000+00:00,WGS84,,Collar removed.,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IdCoy_P3_1:capture2,IdCoy_P3_1:capture2,capture,IdCoy_P3_1,HumanObservation,43.802316306974156,-112.68706977879135,2005-05-06T00:00:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IdCoy_P3_1:recovery2,IdCoy_P3_1:recovery2,bio-logging sensor recovery,IdCoy_P3_1,HumanObservation,43.79943410541192,-112.72638509515035,2005-06-29T23:59:00.000+00:00,WGS84,,Collar removed.,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295519,GPS fix,F53,MachineObservation,38.2853475,-112.0255436,2014-02-11T21:35:42.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295520,GPS fix,F53,MachineObservation,38.2852533,-112.0256839,2014-02-11T23:01:01.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295521,GPS fix,F53,MachineObservation,38.2855722,-112.0256444,2014-02-12T03:01:18.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295522,GPS fix,F53,MachineObservation,38.2854494,-112.0256564,2014-02-12T07:00:59.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295523,GPS fix,F53,MachineObservation,38.2856031,-112.0256297,2014-02-12T11:01:08.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295524,GPS fix,F53,MachineObservation,38.2866822,-112.0258236,2014-02-12T15:01:12.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295525,GPS fix,F53,MachineObservation,38.2875511,-112.0259192,2014-02-12T19:00:59.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295526,GPS fix,F53,MachineObservation,38.2882522,-112.0228786,2014-02-13T03:01:00.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295527,GPS fix,F53,MachineObservation,38.2903081,-112.0165386,2014-02-13T07:01:32.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
F53:deployment1,F53:deployment1:1902295528,GPS fix,F53,MachineObservation,38.2820444,-111.9918983,2014-02-13T11:01:12.000+00:00,WGS84,adult,,,f,Puma concolor,TSN 552479 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578077,GPS fix,IdCoy_P3_1,MachineObservation,43.805269310754184,-112.7119061888433,2004-12-27T12:01:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578078,GPS fix,IdCoy_P3_1,MachineObservation,43.805253804358244,-112.71187868758769,2004-12-27T12:05:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578079,GPS fix,IdCoy_P3_1,MachineObservation,43.805254611303425,-112.71179898779434,2004-12-27T12:10:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578080,GPS fix,IdCoy_P3_1,MachineObservation,43.80522270918354,-112.7117702884922,2004-12-27T12:15:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578081,GPS fix,IdCoy_P3_1,MachineObservation,43.805277413057865,-112.7116772880469,2004-12-27T12:21:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578082,GPS fix,IdCoy_P3_1,MachineObservation,43.805128005490175,-112.71169478785248,2004-12-27T12:25:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578083,GPS fix,IdCoy_P3_1,MachineObservation,43.80518740520675,-112.71180398777118,2004-12-27T12:30:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578084,GPS fix,IdCoy_P3_1,MachineObservation,43.80520991319645,-112.71169648832122,2004-12-27T12:35:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578085,GPS fix,IdCoy_P3_1,MachineObservation,43.80526351166072,-112.71174758819863,2004-12-27T12:40:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment1,IDCoy_P3_1:deployment1:1903578086,GPS fix,IdCoy_P3_1,MachineObservation,43.80522300704765,-112.71173898820605,2004-12-27T12:45:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447281,GPS fix,IdCoy_P3_1,MachineObservation,43.802316306974156,-112.68706977879135,2005-05-06T12:01:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447282,GPS fix,IdCoy_P3_1,MachineObservation,43.80214740376405,-112.68693647895746,2005-05-06T12:05:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447283,GPS fix,IdCoy_P3_1,MachineObservation,43.80225630345771,-112.68685167885121,2005-05-06T12:10:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447284,GPS fix,IdCoy_P3_1,MachineObservation,43.800630705798866,-112.68615727930909,2005-05-06T12:15:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447285,GPS fix,IdCoy_P3_1,MachineObservation,43.79920380945402,-112.6858830785679,2005-05-06T12:20:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447286,GPS fix,IdCoy_P3_1,MachineObservation,43.796385200885524,-112.68515087908295,2005-05-06T12:25:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447287,GPS fix,IdCoy_P3_1,MachineObservation,43.79458020505868,-112.6823283774607,2005-05-06T12:30:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447288,GPS fix,IdCoy_P3_1,MachineObservation,43.793676007286784,-112.6810311777281,2005-05-06T12:35:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447289,GPS fix,IdCoy_P3_1,MachineObservation,43.79213910405195,-112.679266176522,2005-05-06T12:40:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/
IDCoy_P3_1:deployment2,IDCoy_P3_1:deployment2:1903447290,GPS fix,IdCoy_P3_1,MachineObservation,43.79133100383393,-112.67840417618817,2005-05-06T12:45:00.000+00:00,WGS84,,,,,Canis latrans,TSN 180599 (itis.gov),species,https://doi.org/10.5441/001/1.7d8301h2,https://creativecommons.org/publicdomain/zero/1.0/

"Column name","Requested field","DwC Name","Field name","Field description","Download field name","Download field description","More information"
"data_resource_uid","data_resource_uid","","data_resource_uid","Dataset","data_resource_uid","Data Resource ID","The Atlas ID for the data resource"
"images","images","","images","","images","","Images associated with a record"
"dcterms:language","language","dcterms:language","language","","language","","Language of the record"
"dcterms:license","license","dcterms:license","license","License","license","Licence","The license applying to a record."
"dcterms:rightsHolder","rightsholder","dcterms:rightsHolder","rightsholder","","rightsholder","",""
"access_rights","access_rights","dcterms:accessRights","access_rights","","access_rights","",""
"dcterms:bibliographicCitation","bibliographic_citation","dcterms:bibliographicCitation","bibliographic_citation","","bibliographic_citation","","Bibliographic citation for this record"
"institutionID","institution_id","institutionID","institution_id","Institution ID","institution_id","","http://rs.tdwg.org/dwc/terms/institutionID"
"collectionID","collection_id","collectionID","collection_id","Collection ID","collection_id","","http://rs.tdwg.org/dwc/terms/collectionID"
"datasetID","dataset_id","datasetID","dataset_id","Dataset ID","dataset_id","","http://rs.tdwg.org/dwc/terms/datasetID"
"institutionCode","institution_code","institutionCode","institution_code","Institution Code","institution_code","Institution Code","The institution code for this record. This will be populated if the data has come from a museum or herbaria http://rs.tdwg.org/dwc/terms/institutionCode"
"collectionCode","collection_code","collectionCode","collection_code","Collection Code","collection_code","Collection Code","The collection code for this record. This will be populated if the data has come from a museum or herbaria http://rs.tdwg.org/dwc/terms/collectionCode"
"datasetName","dataset_name","datasetName","dataset_name","Dataset / Survey name","dataset_name","","The name of the dataset for this record. Typically used to share the name of the survey when data has been supplied with multiple surveys in a single data resource. http://rs.tdwg.org/dwc/terms/datasetName"
"ownerInstitutionCode","owner_institution_code","ownerInstitutionCode","owner_institution_code","Owner Institution Code","owner_institution_code","","http://rs.tdwg.org/dwc/terms/ownerInstitutionCode"
"basisOfRecord","basis_of_record","basisOfRecord","basis_of_record","Record type","basis_of_record","Basis Of Record","What this is a record of e.g. specimen, human observation, fossil http://rs.tdwg.org/dwc/terms/basisOfRecord"
"dynamicProperties","dynamic_properties","dynamicProperties","dynamic_properties","Dynamic Properties","dynamic_properties","","http://rs.tdwg.org/dwc/terms/dynamicProperties"
"occurrenceID","occurrence_id","occurrenceID","occurrence_id","Occurrence ID","occurrence_id","","http://rs.tdwg.org/dwc/terms/occurrenceID"
"catalogNumber","catalogue_number","catalogNumber","catalogue_number","Catalogue Number","catalogue_number","Catalogue Number","http://rs.tdwg.org/dwc/terms/catalogNumber"
"recordNumber","record_number","recordNumber","record_number","Record number","record_number","Record number","http://rs.tdwg.org/dwc/terms/recordNumber"
"recordedBy","collector","recordedBy","collector","Collector","collector","Collector","http://rs.tdwg.org/dwc/terms/recordedBy"
"individualCount","individual_count","individualCount","individual_count","Individual count","individual_count","Individual count","http://rs.tdwg.org/dwc/terms/individualCount"
"organism_quantity","organism_quantity","organismQuantity","organism_quantity","Organism Quantity","organism_quantity","","http://rs.tdwg.org/dwc/terms/organismQuantity"
"organism_quantity_type","organism_quantity_type","organismQuantityType","organism_quantity_type","Organism Quantity Type","organism_quantity_type","","http://rs.tdwg.org/dwc/terms/organismQuantityType"
"sex","raw_sex","sex","raw_sex","Sex","raw_sex","Sex","http://rs.tdwg.org/dwc/terms/sex"
"lifeStage","life_stage","lifeStage","life_stage","Life stage","life_stage","","http://rs.tdwg.org/dwc/terms/lifeStage"
"reproductiveCondition","reproductive_condition","reproductiveCondition","reproductive_condition","Reproductive Condition","reproductive_condition","","http://rs.tdwg.org/dwc/terms/reproductiveCondition"
"behavior","behavior","behavior","behavior","Behavior","behavior","","http://rs.tdwg.org/dwc/terms/behavior"
"establishmentMeans","establishment_means","establishmentMeans","establishment_means","Establishment means","establishment_means","","http://rs.tdwg.org/dwc/terms/establishmentMeans"
"occurrenceStatus","occurrence_status","occurrenceStatus","occurrence_status","Presence/Absence","occurrence_status","Occurrence status","A statement about the presence or absence of a taxon at a Location http://rs.tdwg.org/dwc/terms/occurrenceStatus"
"preparations","preparations","preparations","preparations","Preparations","preparations","Preparations","http://rs.tdwg.org/dwc/terms/preparations"
"disposition","disposition","disposition","disposition","Disposition","disposition","","http://rs.tdwg.org/dwc/terms/disposition"
"associatedMedia","associated_media","associatedMedia","associated_media","Associated Media","associated_media","","http://rs.tdwg.org/dwc/terms/associatedMedia"
"associatedReferences","associated_references","associatedReferences","associated_references","Associated References","associated_references","","http://rs.tdwg.org/dwc/terms/associatedReferences"
"associatedSequences","associated_sequences","associatedSequences","associated_sequences","Associated Sequences","associated_sequences","","http://rs.tdwg.org/dwc/terms/associatedSequences"
"associatedTaxa","associated_taxa","associatedTaxa","associated_taxa","Associated Taxa","associated_taxa","","http://rs.tdwg.org/dwc/terms/associatedTaxa"
"otherCatalogNumbers","other_catalog_numbers","otherCatalogNumbers","other_catalog_numbers","Other Catalog Numbers","other_catalog_numbers","","http://rs.tdwg.org/dwc/terms/otherCatalogNumbers"
"occurrenceRemarks","occurrence_remarks","occurrenceRemarks","occurrence_remarks","Occurrence Remarks","occurrence_remarks","","http://rs.tdwg.org/dwc/terms/occurrenceRemarks"
"previousIdentifications","previous_identifications","previousIdentifications","previous_identifications","Previous Identifications","previous_identifications","","http://rs.tdwg.org/dwc/terms/previousIdentifications"
"eventID","event_id","eventID","event_id","Event ID","event_id","","http://rs.tdwg.org/dwc/terms/eventID"
"fieldNumber","field_number","fieldNumber","field_number","Field Number","field_number","","http://rs.tdwg.org/dwc/terms/fieldNumber"
"eventDate","occurrence_date","eventDate","occurrence_date","Date (by decade)","occurrence_date","Event Date - parsed","http://rs.tdwg.org/dwc/terms/eventDate"
"eventTime","event_time","eventTime","event_time","Event Time","event_time","Event Time","http://rs.tdwg.org/dwc/terms/eventTime"
"startDayOfYear","start_day_of_year","startDayOfYear","start_day_of_year","Start Day Of Year","start_day_of_year","","http://rs.tdwg.org/dwc/terms/startDayOfYear"
"endDayOfYear","end_day_of_year","endDayOfYear","end_day_of_year","End Day Of Year","end_day_of_year","","http://rs.tdwg.org/dwc/terms/endDayOfYear"
"year","year","year","year","Year","year","Year","The year in which an occurrence was observed. http://rs.tdwg.org/dwc/terms/year"
"month","month","month","month","Month","month","Month","Month of observation, specimen collection date. http://rs.tdwg.org/dwc/terms/month"
"day","day","day","day","Day","day","Day","http://rs.tdwg.org/dwc/terms/day"
"verbatimEventDate","verbatim_event_date","verbatimEventDate","verbatim_event_date","Verbatim event date","verbatim_event_date","Verbatim event date","http://rs.tdwg.org/dwc/terms/verbatimEventDate"
"habitat","habitat","habitat","habitat","Habitat","habitat","","http://rs.tdwg.org/dwc/terms/habitat"
"samplingProtocol","sampling_protocol","samplingProtocol","sampling_protocol","Sampling Protocol","sampling_protocol","","http://rs.tdwg.org/dwc/terms/samplingProtocol"
"samplingEffort","sampling_effort","samplingEffort","sampling_effort","Sampling Effort","sampling_effort","","http://rs.tdwg.org/dwc/terms/samplingEffort"
"fieldNotes","field_notes","fieldNotes","field_notes","Field Notes","field_notes","","http://rs.tdwg.org/dwc/terms/fieldNotes"
"eventRemarks","event_remarks","eventRemarks","event_remarks","Event Remarks","event_remarks","","http://rs.tdwg.org/dwc/terms/eventRemarks"
"locationID","location_id","locationID","location_id","Location ID","location_id","","http://rs.tdwg.org/dwc/terms/locationID"
"higherGeography","higher_geography","higherGeography","higher_geography","Higher Geography","higher_geography","","http://rs.tdwg.org/dwc/terms/higherGeography"
"continent","continent","continent","continent","Continent","continent","","http://rs.tdwg.org/dwc/terms/continent"
"waterBody","water_body","waterBody","water_body","Water Body","water_body","","http://rs.tdwg.org/dwc/terms/waterBody"
"islandGroup","island_group","islandGroup","island_group","Island Group","island_group","","http://rs.tdwg.org/dwc/terms/islandGroup"
"island","island","island","island","Island","island","","http://rs.tdwg.org/dwc/terms/island"
"country","country","country","country","Country","country","Country - parsed","The country where the specimen was collected or observation was made http://rs.tdwg.org/dwc/terms/country"
"countryCode","country_code","countryCode","country_code","Country Code","country_code","","http://rs.tdwg.org/dwc/terms/countryCode"
"stateProvince","state","stateProvince","state","State/Territory","state","State - parsed","http://rs.tdwg.org/dwc/terms/stateProvince"
"county","county","county","county","County","county","","http://rs.tdwg.org/dwc/terms/county"
"municipality","municipality","municipality","municipality","Municipality","municipality","","http://rs.tdwg.org/dwc/terms/municipality"
"locality","raw_locality","locality","raw_locality","Locality","raw_locality","Locality","http://rs.tdwg.org/dwc/terms/locality"
"verbatimLocality","verbatim_locality","verbatimLocality","verbatim_locality","Verbatim Locality","verbatim_locality","","http://rs.tdwg.org/dwc/terms/verbatimLocality"
"minimumElevationInMeters","min_elevation_d","minimumElevationInMeters","min_elevation_d","Minimum elevation in meters","min_elevation_d","Minimum elevation in meters","http://rs.tdwg.org/dwc/terms/minimumElevationInMeters"
"maximumElevationInMeters","max_elevation_d","maximumElevationInMeters","max_elevation_d","Maximum elevation in meters","max_elevation_d","Maximum elevation in meters","http://rs.tdwg.org/dwc/terms/maximumElevationInMeters"
"verbatimElevation","elevation","verbatimElevation","elevation","Verbatim Elevation","elevation","","http://rs.tdwg.org/dwc/terms/verbatimElevation"
"minimumDepthInMeters","min_depth_d","minimumDepthInMeters","min_depth_d","Minimum depth in meters","min_depth_d","Minimum depth in meters","http://rs.tdwg.org/dwc/terms/minimumDepthInMeters"
"maximumDepthInMeters","max_depth_d","maximumDepthInMeters","max_depth_d","Maximum depth in meters","max_depth_d","Maximum depth in meters","http://rs.tdwg.org/dwc/terms/maximumDepthInMeters"
"locationAccordingTo","location_according_to","locationAccordingTo","location_according_to","Location According To","location_according_to","","http://rs.tdwg.org/dwc/terms/locationAccordingTo"
"locationRemarks","location_remarks","locationRemarks","location_remarks","Location Remarks","location_remarks","","http://rs.tdwg.org/dwc/terms/locationRemarks"
"decimalLatitude","latitude","decimalLatitude","latitude","Latitude","latitude","Latitude","The decimal latitude associated with this record. If the original latitude was supplied in degrees, minutes, seconds, this value represents the converted value. http://rs.tdwg.org/dwc/terms/decimalLatitude"
"decimalLongitude","longitude","decimalLongitude","longitude","Longitude","longitude","Longitude","The decimal longitude associated with this record. If the original longitude was supplied in degrees, minutes, seconds, this value represents the converted value. http://rs.tdwg.org/dwc/terms/decimalLongitude"
"geodeticDatum","datum","geodeticDatum","datum","Geodetic datum","datum","Geodetic datum","http://rs.tdwg.org/dwc/terms/geodeticDatum"
"coordinateUncertaintyInMeters","coordinate_uncertainty","coordinateUncertaintyInMeters","coordinate_uncertainty","Coordinate uncertainty (in metres)","coordinate_uncertainty","Coordinate Uncertainty in Metres","A radius in metres defining the smallest circle the location could occur within http://rs.tdwg.org/dwc/terms/coordinateUncertaintyInMeters"
"coordinatePrecision","coordinate_precision","coordinatePrecision","coordinate_precision","Coordinate Precision","coordinate_precision","Coordinate Precision","http://rs.tdwg.org/dwc/terms/coordinatePrecision"
"verbatimCoordinates","verbatim_coordinates","verbatimCoordinates","verbatim_coordinates","Verbatim Coordinates","verbatim_coordinates","","http://rs.tdwg.org/dwc/terms/verbatimCoordinates"
"verbatimLatitude","raw_latitude","verbatimLatitude","raw_latitude","Latitude - original","raw_latitude","Latitude - original","http://rs.tdwg.org/dwc/terms/verbatimLatitude"
"verbatimLatitude","verbatim_latitude","verbatimLatitude","verbatim_latitude","Verbatim Latitude","verbatim_latitude","","http://rs.tdwg.org/dwc/terms/verbatimLatitude"
"verbatimLongitude","raw_longitude","verbatimLongitude","raw_longitude","Longitude - original","raw_longitude","Longitude - original","http://rs.tdwg.org/dwc/terms/verbatimLongitude"
"verbatimLongitude","verbatim_longitude","verbatimLongitude","verbatim_longitude","Verbatim Longitude","verbatim_longitude","","http://rs.tdwg.org/dwc/terms/verbatimLongitude"
"verbatimCoordinateSystem","raw_datum","verbatimCoordinateSystem","raw_datum","Datum","raw_datum","Geodetic datum - original","http://rs.tdwg.org/dwc/terms/verbatimCoordinateSystem"
"verbatimCoordinateSystem","verbatim_coordinate_system","verbatimCoordinateSystem","verbatim_coordinate_system","Verbatim Coordinate System","verbatim_coordinate_system","","http://rs.tdwg.org/dwc/terms/verbatimCoordinateSystem"
"verbatimSRS","verbatim_srs","verbatimSRS","verbatim_srs","Verbatim SRS","verbatim_srs","","http://rs.tdwg.org/dwc/terms/verbatimSRS"
"footprintWKT","footprint_wkt","footprintWKT","footprint_wkt","Footprint WKT","footprint_wkt","","http://rs.tdwg.org/dwc/terms/footprintWKT"
"footprintSRS","footprint_srs","footprintSRS","footprint_srs","Footprint SRS","footprint_srs","","http://rs.tdwg.org/dwc/terms/footprintSRS"
"georeferencedBy","georeferenced_by","georeferencedBy","georeferenced_by","Georeferenced By","georeferenced_by","","http://rs.tdwg.org/dwc/terms/georeferencedBy"
"georeferencedDate","georeferenced_date","georeferencedDate","georeferenced_date","Georeferenced Date","georeferenced_date","","http://rs.tdwg.org/dwc/terms/georeferencedDate"
"georeferenceProtocol","georeference_protocol","georeferenceProtocol","georeference_protocol","Georeference Protocol","georeference_protocol","","http://rs.tdwg.org/dwc/terms/georeferenceProtocol"
"georeferenceSources","georeference_sources","georeferenceSources","georeference_sources","Georeference Sources","georeference_sources","","http://rs.tdwg.org/dwc/terms/georeferenceSources"
"georeference_verification_status","georeference_verification_status","georeferenceVerificationStatus","georeference_verification_status","Georeference Verification Status","georeference_verification_status","","http://rs.tdwg.org/dwc/terms/georeferenceVerificationStatus"
"georeferenceRemarks","georeference_remarks","georeferenceRemarks","georeference_remarks","Georeference Remarks","georeference_remarks","","http://rs.tdwg.org/dwc/terms/georeferenceRemarks"
"identificationID","identification_id","identificationID","identification_id","Identification ID","identification_id","","http://rs.tdwg.org/dwc/terms/identificationID"
"identificationQualifier","identification_qualifier","identificationQualifier","identification_qualifier","Identification Qualifier","identification_qualifier","","http://rs.tdwg.org/dwc/terms/identificationQualifier"
"typeStatus","type_status","typeStatus","type_status","Specimen type","type_status","","http://rs.tdwg.org/dwc/terms/typeStatus"
"identifiedBy","identified_by","identifiedBy","identified_by","Identified by","identified_by","","http://rs.tdwg.org/dwc/terms/identifiedBy"
"dateIdentified","identified_date","dateIdentified","identified_date","Date Identified","identified_date","","http://rs.tdwg.org/dwc/terms/dateIdentified"
"identificationReferences","identification_references","identificationReferences","identification_references","Identification References","identification_references","","http://rs.tdwg.org/dwc/terms/identificationReferences"
"identificationVerificationStatus","identification_verification_status","identificationVerificationStatus","identification_verification_status","Identification Verification Status","identification_verification_status","","http://rs.tdwg.org/dwc/terms/identificationVerificationStatus"
"identificationRemarks","identification_remarks","identificationRemarks","identification_remarks","Identification Remarks","identification_remarks","","http://rs.tdwg.org/dwc/terms/identificationRemarks"
"taxonID","taxon_id","taxonID","taxon_id","Taxon ID","taxon_id","","http://rs.tdwg.org/dwc/terms/taxonID"
"scientificNameID","scientific_name_id","scientificNameID","scientific_name_id","Scientific Name ID","scientific_name_id","","http://rs.tdwg.org/dwc/terms/scientificNameID"
"taxonConceptID","taxon_concept_lsid","taxonConceptID","taxon_concept_lsid","Taxon Concept GUID","taxon_concept_lsid","Taxon Concept GUID","http://rs.tdwg.org/dwc/terms/taxonConceptID"
"scientificName","raw_taxon_name","scientificName","raw_taxon_name","Scientific name (unprocessed)","raw_taxon_name","Scientific Name - original","http://rs.tdwg.org/dwc/terms/scientificName"
"scientificName","taxon_name","scientificName","taxon_name","Scientific name","taxon_name","Scientific Name","http://rs.tdwg.org/dwc/terms/scientificName"
"acceptedNameUsage","accepted_name_usage","acceptedNameUsage","accepted_name_usage","Accepted Name Usage","accepted_name_usage","","http://rs.tdwg.org/dwc/terms/acceptedNameUsage"
"parentNameUsage","parent_name_usage","parentNameUsage","parent_name_usage","Parent Name Usage","parent_name_usage","","http://rs.tdwg.org/dwc/terms/parentNameUsage"
"originalNameUsage","original_name_usage","originalNameUsage","original_name_usage","Original name usage","original_name_usage","","http://rs.tdwg.org/dwc/terms/originalNameUsage"
"namePublishedIn","name_published_in","namePublishedIn","name_published_in","Name Published In","name_published_in","","http://rs.tdwg.org/dwc/terms/namePublishedIn"
"higherClassification","higher_classification","higherClassification","higher_classification","Higher Classification","higher_classification","","http://rs.tdwg.org/dwc/terms/higherClassification"
"kingdom","kingdom","kingdom","kingdom","Kingdom","kingdom","Kingdom","The kingdom the Atlas has matched this record to in the system classification http://rs.tdwg.org/dwc/terms/kingdom"
"phylum","phylum","phylum","phylum","Phylum","phylum","Phylum","The phylum the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/phylum"
"class","class","class","class","Class","class","Class","The class the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/class"
"order","order","order","order","Order","order","Order","The order the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/order"
"family","family","family","family","Family","family","Family","The family the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/family"
"genus","genus","genus","genus","Genus","genus","Genus","The genus the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/genus"
"subgenus","subgenus","subgenus","subgenus","Subgenus","subgenus","","http://rs.tdwg.org/dwc/terms/subgenus"
"specificEpithet","specific_epithet","specificEpithet","specific_epithet","Specific Epithet","specific_epithet","","http://rs.tdwg.org/dwc/terms/specificEpithet"
"infraspecificEpithet","infraspecific_epithet","infraspecificEpithet","infraspecific_epithet","Infraspecific Epithet","infraspecific_epithet","","http://rs.tdwg.org/dwc/terms/infraspecificEpithet"
"taxonRank","rank","taxonRank","rank","Identified to rank","rank","Taxon Rank","http://rs.tdwg.org/dwc/terms/taxonRank"
"vernacularName","common_name","vernacularName","common_name","Common name (processed)","common_name","Vernacular name","http://rs.tdwg.org/dwc/terms/vernacularName"
"nomenclaturalCode","nomenclatural_code","nomenclaturalCode","nomenclatural_code","Nomenclatural Code","nomenclatural_code","","http://rs.tdwg.org/dwc/terms/nomenclaturalCode"
"taxonomicStatus","taxonomic_status","taxonomicStatus","taxonomic_status","Taxonomic Status","taxonomic_status","","http://rs.tdwg.org/dwc/terms/taxonomicStatus"
"nomenclaturalStatus","nomenclatural_status","nomenclaturalStatus","nomenclatural_status","Nomenclatural Status","nomenclatural_status","","http://rs.tdwg.org/dwc/terms/nomenclaturalStatus"
"taxonRemarks","taxon_remarks","taxonRemarks","taxon_remarks","Taxon Remarks","taxon_remarks","","http://rs.tdwg.org/dwc/terms/taxonRemarks"
"individualID","individual_id","individualID","individual_id","","individual_id","","http://rs.tdwg.org/dwc/terms/individualID"
"identifierRole","identifier_role","identifierRole","identifier_role","","identifier_role","","http://rs.tdwg.org/dwc/terms/identifierRole"
"species","species","species","species","Species","species","Species","The species the Atlas has matched this record to in the NSL http://rs.tdwg.org/dwc/terms/species"
"measurementID","measurement_id","measurementID","measurement_id","Measurement ID","measurement_id","","http://rs.tdwg.org/dwc/terms/measurementID"
"verbatimIdentificationQualifier","raw_identification_qualifier","verbatimIdentificationQualifier","raw_identification_qualifier","","raw_identification_qualifier","","http://rs.tdwg.org/dwc/terms/verbatimIdentificationQualifier"
"provenance","provenance","dcterms:provenance","provenance","Provenance","provenance","","Provenance of this dataset. e.g. Published dataset, Draft, Individual sightings"
"measurementDeterminedBy","measurement_determined_by","measurementDeterminedBy","measurement_determined_by","Measurement Determined By","measurement_determined_by","","http://rs.tdwg.org/dwc/terms/measurementDeterminedBy"
"measurementDeterminedDate","measurement_determined_date","measurementDeterminedDate","measurement_determined_date","Measurement Determined Date","measurement_determined_date","","http://rs.tdwg.org/dwc/terms/measurementDeterminedDate"
"recordID","id","recordID","id","Record ID","id","Record ID","Atlas unique ID for this record http://rs.tdwg.org/dwc/terms/recordID"
"dcterms:accessRights","rights","dcterms:rights","rights","","rights","",""
"source","source","dcterms:source","source","","source","",""
"measurementValue","measurement_value","measurementValue","measurement_value","Measurement Value","measurement_value","","http://rs.tdwg.org/dwc/terms/measurementValue"
"relationship_remarks","relationship_remarks","relationshipRemarks","relationship_remarks","Relationship Remarks","relationship_remarks","","http://rs.tdwg.org/dwc/terms/relationshipRemarks"
"verbatimContinent","raw_continent","verbatimContinent","raw_continent","","raw_continent","","http://rs.tdwg.org/dwc/terms/verbatimContinent"
"relatedResourceID","related_resource_id","relatedResourceID","related_resource_id","Related Resource ID","related_resource_id","","http://rs.tdwg.org/dwc/terms/relatedResourceID"
"measurementAccuracy","measurement_accuracy","measurementAccuracy","measurement_accuracy","Measurement Accuracy","measurement_accuracy","","http://rs.tdwg.org/dwc/terms/measurementAccuracy"
"verbatimBasisOfRecord","raw_basis_of_record","verbatimBasisOfRecord","raw_basis_of_record","Basis Of Record - original","raw_basis_of_record","Basis Of Record - original","The basis of record as supplied by the data publisher http://rs.tdwg.org/dwc/terms/verbatimBasisOfRecord"
"measurement_method","measurement_method","measurementMethod","measurement_method","Measurement Method","measurement_method","","http://rs.tdwg.org/dwc/terms/measurementMethod"
"relationshipOfResource","relationship_of_resource","relationshipOfResource","relationship_of_resource","Relationship Of Resource","relationship_of_resource","","http://rs.tdwg.org/dwc/terms/relationshipOfResource"
"measurementType","measurement_type","measurementType","measurement_type","Measurement Type","measurement_type","","http://rs.tdwg.org/dwc/terms/measurementType"
"measurementUnit","measurement_unit","measurementUnit","measurement_unit","Measurement Unit","measurement_unit","","http://rs.tdwg.org/dwc/terms/measurementUnit"
"measurement_remarks","measurement_remarks","measurementRemarks","measurement_remarks","Measurement Remarks","measurement_remarks","","http://rs.tdwg.org/dwc/terms/measurementRemarks"
"Precipitation - seasonality (Bio15)","el882","","el882","Precipitation - seasonality (Bio15)","el882","Precipitation - seasonality (Bio15)","https://sampling.ala.org.au/sampling-service/layers/view/more/el882"
"Precipitation - driest quarter  (Bio17)","el889","","el889","Precipitation - driest quarter  (Bio17)","el889","Precipitation - driest quarter  (Bio17)","https://sampling.ala.org.au/sampling-service/layers/view/more/el889"
"Radiation - seasonality (Bio23)","el887","","el887","Radiation - seasonality (Bio23)","el887","Radiation - seasonality (Bio23)","https://sampling.ala.org.au/sampling-service/layers/view/more/el887"
"Radiation - warmest quarter  (Bio26)","el894","","el894","Radiation - warmest quarter  (Bio26)","el894","Radiation - warmest quarter  (Bio26)","https://sampling.ala.org.au/sampling-service/layers/view/more/el894"
"Moisture Index - highest quarter mean (Bio32)","el865","","el865","Moisture Index - highest quarter mean (Bio32)","el865","Moisture Index - highest quarter mean (Bio32)","https://sampling.ala.org.au/sampling-service/layers/view/more/el865"


ucsc,ncbi,date,organism,ensembldb
araTha1,TAIR10,2011-02,Arabidopsis thaliana,FALSE
canFam3,CanFam3.1,2011-09,Canis familiaris,TRUE
ce10,WS220,2010-10,Caenorhabditis elegans,FALSE
ce11,WBcel235,2013-02,Caenorhabditis elegans,TRUE
danRer10,GRCz10,2014-09,Danio rerio,TRUE
danRer11,GRCz11,2017-05,Danio rerio,TRUE
dm3,BDGP5,2006-04,Drosophila melanogaster,FALSE
dm6,BDGP6,2014-08,Drosophila melanogaster,TRUE
galGal4,Galgal4,2011-11,Gallus gallus,FALSE
galGal5,Gallus_gallus-5.0,2015-12,Gallus gallus,TRUE
galGal6,GRCg6a,2018-03,Gallus gallus,FALSE
hg19,GRCh37,2009-02,Homo sapiens,TRUE
hg38,GRCh38,2013-12,Homo sapiens,TRUE
hg38-noalt,GRCh38,2013-12,Homo sapiens,TRUE
mm9,GRCm37,2007-07,Mus musculus,FALSE
mm10,GRCm38,2011-12,Mus musculus,TRUE
rn5,Rnor_5.0,2012-03,Rattus norvegicus,FALSE
rn6,Rnor_6.0,2014-07,Rattus norvegicus,TRUE
sacCer3,R64-1-1,2011-04,Saccharomyces cerevisiae,TRUE
susScr11,Sscrofa11.1,2017-02,Sus scrofa,TRUE
xenTro2,JGI_4.1,2005-08,Xenopus tropicalis,FALSE
xenTro3,JGI_4.2,2009-11,Xenopus tropicalis,TRUE


,index2,feature(1-50),frequency(1-50),feature(51-100),frequency(51-100),feature(101-150),frequency(101-150),feature(151-200),frequency(151-200),feature(201-250),frequency(201-250),feature(251-300),frequency(251-300),feature(301-350),frequency(301-350),feature(351-400),frequency(351-400),feature(401-450),frequency(401-450),feature(451-500),frequency(451-500),feature(501-550),frequency(501-550),feature(551-600),frequency(551-600),feature(551-616),frequency(551-616)
0,0,Building,2033,Spring,117,Asphalt,34,Plant community,15,Net,8,Pole,5,University,4,Nonbuilding structure,2,Megalith,2,Ford motor company,1,Full-size car,1,Customer,1,Aquatic plant,1
1,1,Architecture,1922,Waterway,114,Prairie,33,Player,15,Agriculture,8,Industry,5,Herd,4,Countertop,2,Sports training,2,California-style pizza,1,Automotive tire,1,Organism,1,Musician,1
2,2,Landmark,1249,Tower,113,Farm,32,Hill,15,Outdoor play equipment,8,Parking lot,5,First-class cricket,4,Railway,2,State park,2,Exercise,1,Calm,1,"Ducks, geese and swans",1,Musical ensemble,1
3,3,Sky,1003,Pasture,110,Arch,31,Grazing,14,Turret,8,Supermarket,5,Convent,4,Subcompact car,2,Road trip,2,Number,1,Dish,1,Basketball moves,1,Pizza,1
4,4,Estate,991,Road,109,Monument,30,Ecoregion,14,Sculpture,8,Font,5,Deck,3,Shopping,2,Hill station,2,Weights,1,Electrical supply,1,Violet family,1,Black,1
5,5,House,846,Body of water,103,Morning,30,Column,14,Company,7,Tidal marsh,5,Dairy cow,3,Coffeehouse,2,Village,2,Road bicycle,1,Waterfowl,1,Clay pigeon shooting,1,Pizza cheese,1
6,6,Property,826,Rural area,102,Suburb,30,Fence,14,Headquarters,7,Sunlight,5,Bog,3,Sheep,2,Boulder,2,Palm tree,1,Steel,1,Cricket,1,Outdoor bench,1
7,7,Tree,821,Castle,94,Campus,30,Memorial,14,Street light,7,Convenience store,5,Inflatable,3,Skatepark,2,Duck,2,Dog agility,1,Play,1,Clock,1,Window film,1
8,8,Mansion,722,Street,93,Leisure,30,Signage,13,Business,7,Light,5,Mammal,3,Kiosk,2,Groundcover,2,Market,1,Red,1,Vault,1,Mountain bike,1
9,9,Palace,680,Spire,87,Aerial photography,29,Brickwork,13,Abbey,7,Siding,5,Bazaar,3,Project,2,Car dealership,2,Resort,1,Monastery,1,Mast,1,Bookselling,1
10,10,City,641,Plaza,87,Lake,29,Bovine,13,Ball game,7,Bench,5,Water transportation,3,Cycling,2,Twig,2,Tennis,1,Forest,1,Sporting Group,1,Classic,1
11,11,Facade,618,Roof,84,Photography,29,Bicycle,13,Door,7,Shore,5,Blossom,3,Cherry blossom,2,Weight training,2,Crocus,1,Classic car,1,Wheel,1,Rye,1
12,12,Stately home,544,Gothic architecture,83,Urban design,28,Cobblestone,13,Art,7,Baptistery,5,Hall,3,Airport,2,Rain,2,Laminate flooring,1,Flatbread,1,Crane,1,Riparian forest,1
13,13,Classical architecture,512,Pond,82,Thoroughfare,28,Soil,13,Gasoline,7,Dome,5,Clock tower,3,Food,2,Sidewalk,2,Tundra,1,Screen door,1,Scaffolding,1,Outdoor furniture,1
14,14,Grass,493,Presidential palace,81,Stream,26,Sports,12,Lighting,7,Wildlife,5,Temple,3,Circle,2,Engineering,2,Working animal,1,Thermokarst,1,Bayou,1,Annual plant,1
15,15,Town,486,Watercourse,80,Wetland,26,Interior design,12,Shade,7,Guard rail,5,Motor vehicle,3,Hotel,2,Skyscraper,2,Train station,1,Ranch,1,Home fencing,1,Ceremony,1
16,16,Medieval architecture,461,Town square,79,Parish,26,Highland,12,Steppe,7,Marketplace,5,Football,3,Cow-goat family,2,Barn,2,Luxury vehicle,1,Arcade,1,Loft,1,,
17,17,Natural landscape,394,Mixed-use,77,Snow,26,Mode of transport,12,Filling station,7,Straw,5,Shack,3,Wildflower,2,Ancient history,2,Yurt,1,Basketball hoop,1,Brassica rapa,1,,
18,18,Ch?teau,367,Vehicle,76,Bird's-eye view,26,Corporate headquarters,12,Bridge,7,Stream bed,5,Walking,3,Adaptation,2,Technology,2,Cyclo-cross bicycle,1,Kettlebell,1,Home door,1,,
19,19,Church,363,Green,76,Marsh,26,Pedestrian,12,Tower block,7,Aisle,5,Alley,3,Grove,2,Petroleum,2,Automotive wheel system,1,Brutalist architecture,1,Traffic,1,,
20,20,Official residence,338,Landscape,75,Downtown,23,Competition event,12,Dock,7,Light fixture,5,Grocery store,3,Beach,2,Environmental art,2,Goat,1,Off-roading,1,Public transport,1,,
21,21,Water,310,Tourism,73,Almshouse,23,Rock,12,Sea,7,Boardwalk,5,Mid-size car,3,Coastal and oceanic landforms,2,Bell tower,1,Graffiti,1,Basketball,1,Picket fence,1,,
22,22,Place of worship,305,Plain,71,Biome,23,Evening,12,Leisure centre,6,Holy places,5,Awning,3,Golf course,2,Flowering plant,1,Streetball,1,Wood flooring,1,Wall clock,1,,
23,23,Cathedral,249,Field,71,College,23,Flooring,12,Physical fitness,6,Race track,5,Boutique,3,Thatching,2,Electronic signage,1,Snapshot,1,Hatchback,1,Antique car,1,,
24,24,Natural environment,246,Wall,71,Yard,23,Condominium,11,Machine,6,Travel,5,Monochrome,3,Shopping mall,2,Electrical wiring,1,Caravanserai,1,Afterglow,1,Humpback bridge,1,,
25,25,Human settlement,227,Metropolitan area,70,Infrastructure,22,History,11,Summer,6,Shed,5,Metal,3,bounce house,2,Swing,1,Performance,1,Futsal,1,Brand,1,,
26,26,Garden,225,Daytime,68,Reservoir,22,Restaurant,11,Swimming pool,6,Crop,4,Construction,3,White,2,City car,1,Deciduous,1,Hacienda,1,Plant stem,1,,
27,27,Botany,222,Fountain,67,Riparian zone,21,Vacation,10,Cityscape,6,Warehouse,4,Port,3,Channel,2,Passenger car,1,Blizzard,1,Goats,1,Meteorological phenomenon,1,,
28,28,Home,211,Transport,65,Lane,20,Metropolis,10,Floodplain,6,Harbor,4,Compact car,3,Exercise equipment,2,Sand,1,Gazebo,1,Textile,1,Fair,1,,
29,29,Neighbourhood,187,Meadow,63,Walkway,20,Branch,10,Flag,6,Hut,4,Inventory,3,Tent,2,Junction,1,Toy,1,Shooting,1,Racquet sport,1,,
30,30,Public space,186,Reflection,60,Horizon,20,Gas,10,Shrubland,6,Rapeseed,4,Advertising,3,Community centre,2,Treadmill,1,Kitchen,1,Vehicle door,1,Cemetery,1,,
31,31,Urban area,186,Historic house,57,Freshwater marsh,20,Farmhouse,10,Villa,6,Baseball field,4,Watercraft,3,Bus stop,2,Tulip,1,Tradition,1,Shelf,1,Closet,1,,
32,32,Residential area,175,Sport venue,55,Chapel,20,Yellow,10,Salt marsh,6,Rest area,4,Track,3,Community,2,Grain,1,Fog,1,Swimming,1,Maze,1,,
33,33,Real estate,174,Water feature,49,Atmospheric phenomenon,20,Fish pond,10,Hay,6,Bird,4,Hedge,3,Material property,2,Stone carving,1,Stock photography,1,Composite material,1,Snout,1,,
34,34,Nature,171,Tourist attraction,48,Canal,19,Playground,10,Factory,6,Ruins,4,Creek,3,Swan,2,Auto part,1,Bicycle wheel,1,Barley,1,Caf?,1,,
35,35,Manor house,170,Flower,47,Freezing,18,Trail,10,Product,6,Soccer,4,Mustard,3,Fell,2,Jungle,1,Tunnel,1,Map,1,Tennis Equipment,1,,
36,36,Land lot,166,Leaf,47,Apartment,18,Floor,10,Games,6,Sports equipment,4,Family car,3,Train,2,Labyrinth,1,Trunk,1,Workshop,1,Air travel,1,,
37,37,Plant,158,Shrub,46,Seat of local government,18,Byzantine architecture,9,Coast,6,Courtyard,4,Water bird,3,Paddy field,2,Antique,1,Dog sports,1,Exercise machine,1,Obelisk,1,,
38,38,Grassland,156,Grass family,46,Stadium,18,Furniture,9,Soccer-specific stadium,6,Sunset,4,Basketball court,3,Fisheye lens,2,Pier,1,Weightlifting machine,1,Handrail,1,Concrete bridge,1,,
39,39,Cloud,154,Courthouse,44,Team sport,18,Line,9,Frost,6,Hardwood,4,Arena,3,Trade,2,Shot tower,1,Shooting sport,1,Ingredient,1,Arecales,1,,
40,40,Bank,151,Reflecting pool,43,Road surface,17,National historic landmark,9,Event,6,Crowd,4,Canola,3,Concrete,2,Running,1,Highway,1,Artificial turf,1,Ship,1,,
41,41,Water resources,148,Winter,41,Fortification,17,Atmosphere,9,Fuel,6,Arroyo,4,Slope,3,Land vehicle,2,Levee,1,Strength training,1,Animal sports,1,Logo,1,,
42,42,Historic site,133,Wilderness,41,Fen,17,Team,9,Goal,6,Ditch,4,Dusk,3,Baseball park,2,Harvest,1,Diner,1,Air sports,1,Reinforced concrete,1,,
43,43,Nature reserve,132,Cottage,39,Autumn,16,Fun,8,Iron,6,Marina,4,Ancient roman architecture,3,Canopy,2,Cabinetry,1,Mass production,1,Cuisine,1,Outhouse,1,,
44,44,Vegetation,130,Brick,38,Room,16,Outlet store,8,Table,6,Listed building,4,Mustard plant,3,Driveway,2,Classical sculpture,1,Toyota prius,1,Italian food,1,Winter storm,1,,
45,45,Steeple,128,Commercial building,37,Window,16,Dirt road,8,Panorama,6,Black-and-white,4,Boat,3,Rolling stock,2,Skeet shooting,1,Golf club,1,Tournament,1,Tall ship,1,,
46,46,Botanical garden,126,Landscaping,36,Geological phenomenon,16,Ceiling,8,Glass,6,Fast food,4,Freeway,3,Loch,2,Intersection,1,Tire,1,Ocean,1,Toolroom,1,,
47,47,River,121,Car,36,Retail,15,Observation tower,8,Basilica,6,Gym,4,Log cabin,3,Parking,2,Woodland,1,Polder,1,Boating,1,Vintage car,1,,
48,48,Park,121,Woody plant,35,Statue,15,Night,8,Wood,5,Fast food restaurant,4,Backyard,3,Path,2,Mountainous landforms,1,water lily,1,Barware,1,Water castle,1,,
49,49,Lawn,118,Recreation,34,Mountain,15,Cumulus,8,Livestock,5,Blue,4,Tennis court,3,Championship,2,Playground slide,1,Musical instrument,1,Music,1,Bar,1,,


IRI,label,displayOrder,variable,dataFile,definition,category,parentLabel,parentIRI,codebookDescription,codebookValues,termType,replaces
http://purl.obolibrary.org/obo/PCO_0000024,Household,,,,,Household,,http://www.w3.org/2002/07/owl#Thing,,,,
http://purl.obolibrary.org/obo/ENVO_00000004,Country,,country_code,score_sm_cohort_ken_tan_march3_2020,,Household,Geographic location,http://purl.obolibrary.org/obo/GAZ_00000448,Country code,,variable,
http://purl.obolibrary.org/obo/GAZ_00000448,Geographic location,,,,,Household,Household,http://purl.obolibrary.org/obo/PCO_0000024,,,,
http://purl.obolibrary.org/obo/EUPATH_0020097,Household administrative information,,,,,Household,Household,http://purl.obolibrary.org/obo/PCO_0000024,,,category,
http://purl.obolibrary.org/obo/EUPATH_0044175,Village study arm,,study_arm,score_sm_cohort_ken_tan_march3_2020,,Household,Household administrative information,http://purl.obolibrary.org/obo/EUPATH_0020097,Study arm,,variable,
http://purl.obolibrary.org/obo/EUPATH_0000738,Observation,,,,,Observation,,http://www.w3.org/2002/07/owl#Thing,,,,
http://purl.obolibrary.org/obo/EUPATH_0010075,Height (cm),,hght,score_sm_cohort_ken_tan_march3_2020,Height,Observation,Anthropometry,http://purl.obolibrary.org/obo/EUPATH_0000649,Height measured using standardized technique (stadiometer),,variable,
http://purl.obolibrary.org/obo/EUPATH_0000732,Weight (kg),,wght,score_sm_cohort_ken_tan_march3_2020,,Observation,Anthropometry,http://purl.obolibrary.org/obo/EUPATH_0000649,Weight measured using standardized technique (calibrated scale),,variable,
http://purl.obolibrary.org/obo/EUPATH_0000090,Malaria diagnosis,3,malaria,score_sm_cohort_ken_tan_march3_2020,,Observation,Diagnosis,http://purl.obolibrary.org/obo/OGMS_0000073,Malaria blood smear test,,variable,
http://purl.obolibrary.org/obo/EUPATH_0000649,Anthropometry,,,,,Observation,Observation,http://purl.obolibrary.org/obo/EUPATH_0000738,,,,
http://purl.obolibrary.org/obo/OGMS_0000073,Diagnosis,,,,,Observation,Observation,http://purl.obolibrary.org/obo/EUPATH_0000738,,,,
http://purl.obolibrary.org/obo/EUPATH_0000310,Observation details,,,,,Observation,Observation,http://purl.obolibrary.org/obo/EUPATH_0000738,,,,
http://purl.obolibrary.org/obo/OBI_0001508,Study timepoint,1,study_year,score_sm_cohort_ken_tan_march3_2020,"5 year study with observations at year 1, 3 & 5.",Observation,Observation,http://purl.obolibrary.org/obo/EUPATH_0000738,Study year,,variable,
http://purl.obolibrary.org/obo/OBI_0001169,Age,2,age,score_sm_cohort_ken_tan_march3_2020,Age in years,Observation,Observation details,http://purl.obolibrary.org/obo/EUPATH_0000310,Age of study participant,,variable,
http://purl.obolibrary.org/obo/EUPATH_0000096,Participant,,,,,Participant,,http://www.w3.org/2002/07/owl#Thing,,,,
http://purl.obolibrary.org/obo/PATO_0000047,Sex,,sex,score_sm_cohort_ken_tan_march3_2020,Gender,Participant,Demographics,http://purl.obolibrary.org/obo/EUPATH_0010981,Sex of study participant,,variable,
http://purl.obolibrary.org/obo/EUPATH_0010035,Administrative information,,,,,Participant,Participant,http://purl.obolibrary.org/obo/EUPATH_0000096,,,,
http://purl.obolibrary.org/obo/EUPATH_0010981,Demographics,,,,,Participant,Participant,http://purl.obolibrary.org/obo/EUPATH_0000096,,,,
http://purl.obolibrary.org/obo/EUPATH_0000609,Sample,,,,,Sample,,http://www.w3.org/2002/07/owl#Thing,,,,
http://purl.obolibrary.org/obo/EUPATH_0030115,Eukaryote in stool detection aggregate data,,,,,Sample,Aggregate organism in stool detection data,http://purl.obolibrary.org/obo/EUPATH_0030114,,,,
http://purl.obolibrary.org/obo/EUPATH_0030030,"Any Hookworm, by microscopy",,hook_binary,score_sm_cohort_ken_tan_march3_2020,,Sample,Ancylostomatoidea in stool aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030027,Hookworm infection: Presence or Absence,,variable,
http://purl.obolibrary.org/obo/EUPATH_0030031,"Any Ascaris lumbricoides, by microscopy",,asc_binary,score_sm_cohort_ken_tan_march3_2020,Presence or absence of ascaris eggs,Sample,Ascaris in stool aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030028,Ascaris infection: Presence or Absence,,variable,
http://purl.obolibrary.org/obo/EUPATH_0000047,Hemoglobin (g/dL),,hgb,score_sm_cohort_ken_tan_march3_2020,,Sample,Blood test,http://purl.obolibrary.org/obo/EUPATH_0011795,Hemoglobin measured using capillary blood,,variable,
http://purl.obolibrary.org/obo/EUPATH_0030027,Ancylostomatoidea in stool aggregate data,,,,,Sample,Eukaryote in stool detection aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030115,,,,
http://purl.obolibrary.org/obo/EUPATH_0030028,Ascaris in stool aggregate data,,,,,Sample,Eukaryote in stool detection aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030115,,,,
http://purl.obolibrary.org/obo/EUPATH_0030116,Schistosoma in stool aggregate data,,,,,Sample,Eukaryote in stool detection aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030115,,,,
http://purl.obolibrary.org/obo/EUPATH_0030029,Trichuris in stool aggregate data,,,,,Sample,Eukaryote in stool detection aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030115,,,,
http://purl.obolibrary.org/obo/EUPATH_0011795,Blood test,,,,,Sample,Laboratory test,http://purl.obolibrary.org/obo/OGMS_0000056,,,,
http://purl.obolibrary.org/obo/EUPATH_0000724,Stool microbiology test,,,,,Sample,Laboratory test,http://purl.obolibrary.org/obo/OGMS_0000056,,,,
http://purl.obolibrary.org/obo/OGMS_0000056,Laboratory test,,,,,Sample,Sample,http://purl.obolibrary.org/obo/EUPATH_0000609,,,,
http://purl.obolibrary.org/obo/EUPATH_0030023,"Any Schistosoma mansoni, by microscopy",,sm_binary,score_sm_cohort_ken_tan_march3_2020,,Sample,Schistosoma in stool aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030116,S. mansoni infection: Presence or Absence,,variable,
http://purl.obolibrary.org/obo/EUPATH_0030024,"Mean Schistosoma mansoni count eggs per gram, by microscopy",,mean_epg,score_sm_cohort_ken_tan_march3_2020,"Mean Schistosoma mansoni eggs per gram, from all samples for this study participant",Sample,Schistosoma in stool aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030116,"Mean Schistosoma mansoni infection intensity (eggs per gram of stool): arithmetic mean of sm1a_epg, sm1b_epg, sm2a_epg, sm2b_epg, sm3a_epg, sm3b_epg",,variable,
http://purl.obolibrary.org/obo/EUPATH_0030114,Aggregate organism in stool detection data,,,,,Sample,Stool microbiology test,http://purl.obolibrary.org/obo/EUPATH_0000724,,,,
http://purl.obolibrary.org/obo/EUPATH_0030032,"Any Trichuris trichiura, by microscopy",,trich_binary,score_sm_cohort_ken_tan_march3_2020,,Sample,Trichuris in stool aggregate data,http://purl.obolibrary.org/obo/EUPATH_0030029,Trichuris infection: Presence or Absence,,variable,

function,name,type,value,default,restrictions,description,used_,comment_,comparator
MRMFeatureFilter.filter_MRMFeatures,flag_or_filter,string,filter,flag,filter; flag,"Flag or Filter (i.e., remove) Components or transitions that do not pass the QC.",TRUE,,
MRMFeatureFilter.filter_MRMFeatures,report_xic,string,FALSE,FALSE,true; false,Embed an image of the XIC in the QC report.,TRUE,,
MRMFeatureFilter.filter_MRMFeatures,report_tic,string,FALSE,FALSE,true; false,Embed an image of the TIC in the QC report.,TRUE,,
MRMFeatureFilter.filter_MRMFeatures.qc,flag_or_filter,string,flag,flag,filter; flag,"Flag or Filter (i.e., remove) Components or transitions that do not pass the QC.",TRUE,,
MRMFeatureFilter.filter_MRMFeatures.qc,report_xic,string,FALSE,FALSE,true; false,Embed an image of the XIC in the QC report.,TRUE,,
MRMFeatureFilter.filter_MRMFeatures.qc,report_tic,string,FALSE,FALSE,true; false,Embed an image of the TIC in the QC report.,TRUE,,
FIAMS,acquisition_start,float,0,0,0,The start time to use when extracting out the spectra windows from the MSExperiment,TRUE,,
FIAMS,acquisition_end,float,90,30,,The end time to use when extracting out the spectra windows from the MSExperiment,TRUE,,
FIAMS,resolution,float,120000,120000,,The instrument settings: resolution,TRUE,,
FIAMS,max_mz,float,1200,1500,,Maximum mz,TRUE,,
FIAMS,bin_step,float,20,20,,The size of the step to recalculated the bin size used for adding up spectra along the time axis,TRUE,,
PickMS1Features,frame_length,int,11,11,,SavitzkyGolayFilter parameter. The number of subsequent data points used for smoothing,TRUE,,
PickMS1Features,polynomial_order,int,4,4,,SavitzkyGolayFilter parameter. Order or the polynomial that is fitted,TRUE,,
PickMS1Features,sne:window,float,10,10,,SignalToNoiseEstimatorMedianRapid parameter. Signal-to-noise estimation window (in mz),TRUE,,
PickMS1Features,write_convex_hull,boolean,FALSE,FALSE,true; false,Whether to write out all points of all features into the featureXML,TRUE,,
PickMS1Features,compute_peak_shape_metrics,boolean,TRUE,FALSE,true; false,"Calulates various peak shape metrics (e.g., tailing) that can be used for downstream QC/QA.",TRUE,,
PickMS1Features,min_intensity,float,1000,86000,,All features below the minimum intensity will be discarded,TRUE,,
PickMS1Features,baseline_type,string,vertical_division,,,,TRUE,,
PickMS1Features,integration_type,string,trapezoid,,,,TRUE,,
AccurateMassSearchEngine,mass_error_value,float,2,5,,Tolerance allowed for accurate mass search.,TRUE,,
AccurateMassSearchEngine,mass_error_unit,string,ppm,ppm,ppm; Da,Unit of mass error (ppm or Da),TRUE,,
AccurateMassSearchEngine,ionization_mode,string,auto,,positive; negative; auto,"Positive or negative ionization mode? If 'auto' is used, the first feature of the input map must contain the meta-value 'scan_polarity'. If its missing, the tool will exit with error.",TRUE,,
AccurateMassSearchEngine,isotopic_similarity,boolean,FALSE,FALSE,true; false,Computes a similarity score for each hit (only if the feature exhibits at least two isotopic mass traces).,FALSE,,
AccurateMassSearchEngine,db:mapping,list,["C:/Users/dmccloskey/Desktop/20201105_FIA_MS_OrganismTest/CHEMISTRY/iJO1366_mapping.tsv"],["CHEMISTRY/iJO1366_mapping.tsv"],,"Database input file(s), containing four tab-separated columns of identifier, name, SMILES, INCHI.  The identifier should match with mapping file. SMILES and INCHI are reported in the output, but not used otherwise. By default CHEMISTRY/iJO1366_struct.tsv in OpenMS/share is used! If empty, the default will be used.",TRUE,,
AccurateMassSearchEngine,db:struct,list,["C:/Users/dmccloskey/Desktop/20201105_FIA_MS_OrganismTest/CHEMISTRY/iJO1366_struct.tsv"],["CHEMISTRY/iJO1366_struct.tsv"],,"Database input file(s), containing four tab-separated columns of identifier, name, SMILES, INCHI.  The identifier should match with mapping file. SMILES and INCHI are reported in the output, but not used otherwise. By default CHEMISTRY/iJO1366_struct.tsv in OpenMS/share is used! If empty, the default will be used.",TRUE,,
AccurateMassSearchEngine,positive_adducts,string,C:/Users/dmccloskey/Desktop/20201105_FIA_MS_OrganismTest/CHEMISTRY/positive_adducts.tsv,CHEMISTRY/PositiveAdducts.tsv,,This file contains the list of potential positive adducts that will be looked for in the database. Edit the list if you wish to exclude/include adducts. By default CHEMISTRY/PositiveAdducts.tsv in OpenMS/share is used.,TRUE,,
AccurateMassSearchEngine,negative_adducts,string,C:/Users/dmccloskey/Desktop/20201105_FIA_MS_OrganismTest/CHEMISTRY/negative_adducts.tsv,CHEMISTRY/NegativeAdducts.tsv,,This file contains the list of potential negative adducts that will be looked for in the database. Edit the list if you wish to exclude/include adducts. By default CHEMISTRY/NegativeAdducts.tsv in OpenMS/share is used.,TRUE,,
AccurateMassSearchEngine,use_feature_adducts,boolean,FALSE,FALSE,true; false,Whether to filter AMS candidates mismatching available feature adduct annotation.,FALSE,,
AccurateMassSearchEngine,keep_unidentified_masses,boolean,FALSE,FALSE,true; false,Keep features that did not yield any DB hit.,FALSE,,
AccurateMassSearchEngine,mzTab:exportIsotopeIntensities,boolean,FALSE,FALSE,true; false,[featureXML input only] Export column with available isotope trace intensities (opt_global_MTint),FALSE,,
SequenceProcessor,n_thread,int,29,1,,Number of threads to use,TRUE,,
MergeInjections,scan_polarity_merge_rule,string,WeightedMean,,,,TRUE,,
MergeInjections,mass_range_merge_rule,string,Sum,,,,TRUE,,
MergeInjections,dilution_series_merge_rule,string,Max,,,,TRUE,,
MergeInjections,scan_polarity_merge_feature_name,string,peak_apex_int,,,,TRUE,,
MergeInjections,mass_range_merge_feature_name,string,peak_apex_int,,,,TRUE,,
MergeInjections,dilution_series_merge_feature_name,string,peak_apex_int,,,,TRUE,,
MergeInjections,merge_subordinates,boolean,FALSE,TRUE,,,TRUE,,


"Individual_ID..RNAseq.library.BID.","CaseID..RNA.passed.QC..final.","BrainBank","Organism","PMI","pH","BrainWeight","YearAutopsy","Sex","Ethnicity","AgeDeath","Diagnosis","AgeOnset","DurationIllness","CauseDeath","Hemisphere","RIN","LibraryBatch","Group","ReadDepth","RNAdeg","PicardQC_TOTAL_READS","PicardQC_PF_READS_ALIGNED","PicardQC_PF_HQ_ALIGNED_READS","PicardQC_PCT_CHIMERAS","PicardQC_PF_ALIGNED_BASES","PicardQC_CORRECT_STRAND_READS","PicardQC_PCT_CORRECT_STRAND_READS","PicardQC_MEDIAN_CV_COVERAGE","PicardQC_MEDIAN_5PRIME_TO_3PRIME_BIAS","PicardQC_AT_DROPOUT","PicardQC_READ_PAIR_DUPLICATES","PicardQC_READ_PAIR_OPTICAL_DUPLICATES"
"2014-2200","N-18","SMRI ""New""","Homo sapiens",31,6.68,1330,2002,"M","CAUC",48,"BP",25,23,"CARDIAC","Right",7,"11/6/2014","BD",94.93106,0.553023,94931060,94931060,85397976,0.000756,9402531425,29075263,0.987703,0.383688,0.553023,9.281641,6367552,4943118
"2014-2201","N-21","SMRI ""New""","Homo sapiens",78,6.7,1286,2003,"M","CAUC",43,"SCZ",20,23,"SUIC:JUMPED","Right",7.3,"12/31/2014","SCZ",132.96079,0.562799,132960790,132960790,118912558,0.000659,13127685357,38248565,0.986157,0.415328,0.562799,9.99027,9245219,7288260
"2014-2621","N-9","SMRI ""New""","Homo sapiens",36,6.62,1980,1997,"M","CAUC",56,"Control",NA,NA,"CARDIAC","Right",7.8,"12/29/2014","CTL",87.090292,0.544017,87090292,87090292,76366340,0.000896,8496745600,27821135,0.975314,0.411702,0.544017,14.824147,10335088,7943242
"2014-2622","N-10","SMRI ""New""","Homo sapiens",26,6.6,1530,1998,"M","CAUC",53,"SCZ",28,25,"SUIC:JUMPED","Right",8.1,"12/29/2014","SCZ",85.231866,0.577014,85231866,85231866,76873842,0.000699,8353161814,24175909,0.975001,0.365859,0.577014,10.324155,6371154,5196045
"2014-2624","N-12","SMRI ""New""","Homo sapiens",45,6.473,1360,2002,"F","CAUC",55,"BP",25,30,"SUIC:OD","Right",8.2,"12/29/2014","BD",99.552422,0.664604,99552422,99552422,86865558,0.000822,9705539799,30498697,0.984636,0.364136,0.664604,15.561212,9523027,7983368
"2014-2625","N-13","SMRI ""New""","Homo sapiens",16,6.58,1265,2002,"F","AA",52,"SCZ",30,22,"COPD","Left",8.3,"12/29/2014","SCZ",90.601358,0.622181,90601358,90601358,79820276,0.000902,8869098651,27188853,0.982401,0.368989,0.622181,13.148183,7882191,6713053
"2014-2626","N-14","SMRI ""New""","Homo sapiens",47,6.55,1490,2002,"M","CAUC",49,"Control",NA,NA,"CARDIAC","Right",8.2,"12/29/2014","CTL",89.81813,0.582622,89818130,89818130,80394798,0.000783,8786659501,26646316,0.985048,0.372593,0.582622,10.417277,6656024,5502761
"2014-2627","N-15","SMRI ""New""","Homo sapiens",20,6.72,1505,2002,"M","HiSP",51,"Control",NA,NA,"CARDIAC","Right",8.1,"12/29/2014","CTL",76.868534,0.605641,76868534,76868534,67331400,0.000725,7500142101,22810267,0.984924,0.392624,0.605641,13.031839,6584318,5529648
"2014-2628","N-16","SMRI ""New""","Homo sapiens",44,6.81,1375,2002,"F","CAUC",53,"SCZ",30,23,"CARDIAC","Left",NA,"12/29/2014","SCZ",81.475462,0.586033,81475462,81475462,72213286,0.000797,7979901668,24411299,0.984778,0.394944,0.586033,13.082563,5996410,4916446
"2015-1","N-17","SMRI ""New""","Homo sapiens",NA,NA,1300,2002,"F","CAUC",NA,"SCZ",20,40,"CARDIAC","Left",NA,"12/31/2014","SCZ",90.551108,0.600096,90551108,90551108,79402586,0.000801,8828716603,27371766,0.976527,0.379725,0.600096,14.356329,8210874,6962113
"2015-17","N-1","SMRI ""New""","Homo sapiens",17,6.69,1600,1995,"M","CAUC",48,"Control",NA,NA,"CARDIAC","Left",8.7,"1/5/2015","CTL",83.650758,0.513966,83650758,83650758,74796360,0.000799,8267442413,25319949,0.986782,0.397117,0.513966,10.12378,5556079,4515423
"2015-18","N-2","SMRI ""New""","Homo sapiens",12,6.51,1410,1995,"M","HiSP",48,"Control",NA,NA,"CARDIAC","Right",8.4,"1/5/2015","CTL",79.194294,0.551499,79194294,79194294,70700394,0.000849,7813953975,23247909,0.985509,0.397223,0.551499,11.820383,4975584,4098253
"2015-19","N-3","SMRI ""New""","Homo sapiens",23,6.79,1700,1995,"M","CAUC",34,"Control",NA,NA,"CARDIAC","Right",8.6,"1/5/2015","CTL",86.16832,0.556769,86168320,86168320,76278678,0.000822,8509853628,26907222,0.988051,0.388397,0.556769,10.715171,6541973,5428319
"2015-20","N-4","SMRI ""New""","Homo sapiens",24,6.72,1500,1996,"M","CAUC",56,"Control",NA,NA,"CARDIAC","Right",8,"1/5/2015","CTL",80.92777,0.564925,80927770,80927770,70567290,0.000854,7960092290,25039655,0.988006,0.395544,0.564925,12.958011,6849632,5759339
"2015-21","N-5","SMRI ""New""","Homo sapiens",142,6.63,1320,1996,"M","CAUC",37,"SCZ",20,17,"SUIC:JUMPED","Left",7.7,"1/5/2015","SCZ",76.986616,0.579046,76986616,76986616,68515666,0.000774,7528306229,22221144,0.98678,0.395047,0.579046,9.930877,5184223,4315720
"2015-22","N-6","SMRI ""New""","Homo sapiens",121,6.69,1510,1996,"M","CAUC",46,"SCZ",20,26,"SUIC:OD","Right",6.5,"1/5/2015","SCZ",89.231282,0.6,89231282,89231282,77256802,0.000895,8792523734,28815683,0.986923,0.376082,0.6,17.055443,8804670,7426285
"2015-23","N-7","SMRI ""New""","Homo sapiens",53,6.59,1420,1997,"M","AS",70,"Control",NA,NA,"CARDIAC","Right",8.1,"1/5/2015","CTL",77.489038,0.547983,77489038,77489038,69861992,0.000849,7634109982,22890182,0.98583,0.379592,0.547983,8.819086,5159661,4229606
"2015-24","N-8","SMRI ""New""","Homo sapiens",41,6.36,1370,1997,"M","AS",55,"Control",NA,NA,"CARDIAC","Right",7.9,"1/5/2015","CTL",81.331062,0.537256,81331062,81331062,72585684,0.000815,8022780758,23657991,0.986789,0.395356,0.537256,10.003122,5399966,4475868
"2015-2572","AC-38","SMRI ""Array""","Homo sapiens",47,6.8,1460,1998,"M","CAUC",60,"Control",NA,NA,"CARDIAC","Right",7.3,"9/10/2015","CTL",72.735812,0.556449,72735812,72735812,65193736,0.000722,7192153878,20595736,0.981865,0.420639,0.556449,14.453849,5970698,5120039
"2015-2573","AC-42","SMRI ""Array""","Homo sapiens",16,6.1,1340,1999,"M","CAUC",64,"BP",19,45,"PNEUMONIA","Right",7.9,"9/10/2015","BD",73.49278,0.512758,73492780,73492780,66601096,0.000656,7282361291,18857878,0.97981,0.417865,0.512758,12.03507,4897630,4186652
"2015-2574","AC-44","SMRI ""Array""","Homo sapiens",36,6.8,1340,1999,"F","CAUC",32,"SCZ",29,3,"SUIC:JUMPED","Left",8.5,"9/10/2015","SCZ",39.02249,0.34871,39022490,39022490,35917854,0.000578,3861196760,10859357,0.978919,0.575606,0.34871,9.186062,3019784,2341717
"2015-2575","AC-47","SMRI ""Array""","Homo sapiens",32,6.67,1560,1999,"M","CAUC",44,"SCZ",9,35,"CARDIAC","Left",7.3,"9/10/2015","SCZ",57.963008,0.589477,57963008,57963008,51139724,0.000653,5687306610,15313981,0.981036,0.464387,0.589477,20.89511,7215682,6565064
"2015-2576","AC-49","SMRI ""Array""","Homo sapiens",22,6.48,1480,1999,"M","CAUC",34,"Control",NA,NA,"CARDIAC","Right",7.9,"9/10/2015","CTL",49.353156,0.580784,49353156,49353156,44066228,0.000684,4875184459,13935610,0.982155,0.469986,0.580784,18.178092,5062441,4515973
"2015-2577","AC-58","SMRI ""Array""","Homo sapiens",32,6.97,1290,2000,"F","CAUC",63,"BP",43,20,"CARDIAC","Left",8.9,"9/10/2015","BD",65.218444,0.632738,65218444,65218444,57608564,0.000853,6446215736,20207642,0.979008,0.487975,0.632738,19.657648,7157749,6157934
"2015-2578","AC-100","SMRI ""Array""","Homo sapiens",38,6.93,1515,2002,"F","CAUC",59,"SCZ",14,45,"CARDIAC","Right",7.6,"9/10/2015","SCZ",62.588506,0.654114,62588506,62588506,55538208,0.000756,6183907461,17851234,0.982882,0.449722,0.654114,18.79371,6211926,5524301
"2015-2579","AC-65","SMRI ""Array""","Homo sapiens",23,6.93,1390,2000,"M","CAUC",49,"Control",NA,NA,"CARDIAC","Left",8.6,"9/10/2015","CTL",43.902558,0.509342,43902558,43902558,39651276,0.000683,4347009877,13019695,0.980328,0.537931,0.509342,19.624052,4692087,4069778
"2015-2580","AC-66","SMRI ""Array""","Homo sapiens",35,6.66,1390,2000,"M","CAUC",45,"SCZ",15,30,"CARDIAC","Left",8.4,"9/14/2015","SCZ",39.819038,0.486266,39819038,39819038,36232710,0.000672,3956206614,11265432,0.983482,0.506055,0.486266,13.835786,3158702,2600905
"2015-2581","AC-67","SMRI ""Array""","Homo sapiens",24,7.03,1415,2000,"M","CAUC",35,"Control",NA,NA,"CARDIAC","Left",8.6,"9/14/2015","CTL",41.662236,0.4986,41662236,41662236,37425182,0.000825,4118835736,12910439,0.9862,0.51253,0.4986,18.286834,4401895,3933640
"2015-2582","AC-70","SMRI ""Array""","Homo sapiens",31,6.7,1515,2000,"M","CAUC",55,"Control",NA,NA,"CARDIAC","Left",7.7,"9/14/2015","CTL",55.926934,0.486254,55926934,55926934,50182380,0.000784,5546223128,16568304,0.98572,0.458569,0.486254,15.271577,5528510,4757084
"2015-2583","AC-72","SMRI ""Array""","Homo sapiens",38,6.39,1190,2000,"F","CAUC",49,"BP",20,29,"OD","Right",6.9,"9/14/2015","BD",41.106946,0.469966,41106946,41106946,37771450,0.000641,4068094723,11093983,0.981788,0.45398,0.469966,8.859602,2761815,2369871
"2015-2584","AC-74","SMRI ""Array""","Homo sapiens",24,6.51,1450,2000,"F","CAUC",33,"BP",15,18,"SUIC:HANGING","Left",8.2,"9/14/2015","BD",49.818308,0.506553,49818308,49818308,44664626,0.000749,4927161240,14816089,0.985268,0.493615,0.506553,16.00603,4555775,3926558
"2015-2585","AC-75","SMRI ""Array""","Homo sapiens",42,6.65,1170,2000,"F","CAUC",54,"SCZ",17,37,"PNEUMONIA","Right",8.5,"9/14/2015","SCZ",39.403664,0.446528,39403664,39403664,36399448,0.00068,3912320116,10859147,0.98439,0.525933,0.446528,10.484764,2614187,2033924
"2015-2586","AC-82","SMRI ""Array""","Homo sapiens",26,6.8,1470,2001,"M","CAUC",39,"SCZ",34,5,"SUIC:HANGING","Right",8.1,"9/14/2015","SCZ",105.610496,0.697496,105610496,105610496,91613628,0.000861,10423192130,32968810,0.984735,0.474277,0.697496,22.019751,13492436,12020805
"2015-2587","AC-83","SMRI ""Array""","Homo sapiens",13,6.57,1410,2001,"M","CAUC",32,"Control",NA,NA,"CARDIAC","Right",8.6,"9/14/2015","CTL",50.719062,0.513081,50719062,50719062,46222172,0.000741,5033938873,15102424,0.985313,0.501862,0.513081,13.909067,3905458,3309732
"2015-2588","AC-84","SMRI ""Array""","Homo sapiens",11,6.6,1495,2001,"M","CAUC",47,"Control",NA,NA,"CARDIAC","Left",9,"9/16/2015","CTL",61.073236,0.514853,61073236,61073236,55102110,0.000759,6063903705,18694062,0.987593,0.514743,0.514853,16.454639,6029491,5296114
"2015-2589","AC-87","SMRI ""Array""","Homo sapiens",54,6.18,1629,2001,"M","CAUC",41,"SCZ",20,21,"CARDIAC","Left",8.3,"9/16/2015","SCZ",47.796686,0.501286,47796686,47796686,43573958,0.000631,4726088098,12651901,0.983026,0.488779,0.501286,13.14058,3735320,3222334
"2015-2590","AC-88","SMRI ""Array""","Homo sapiens",65,6.67,1490,2001,"M","CAUC",43,"SCZ",25,18,"SUIC:HANGING","Right",8.4,"9/16/2015","SCZ",63.959442,0.51032,63959442,63959442,58015496,0.000663,6319164576,18499464,0.979795,0.511157,0.51032,15.853199,6377671,5363334
"2015-2591","AC-91","SMRI ""Array""","Homo sapiens",22,6.71,1900,2001,"M","CAUC",51,"Control",NA,NA,"CARDIAC","Left",8.7,"9/16/2015","CTL",54.553752,0.625519,54553752,54553752,48246798,0.000827,5400055427,16830464,0.985928,0.476119,0.625519,20.023201,6006121,5391445
"2015-2592","AC-92","SMRI ""Array""","Homo sapiens",26,6.19,1410,2001,"M","CAUC",42,"SCZ",24,18,"SUIC:JUMPED","Right",7.5,"9/16/2015","SCZ",55.260236,0.564782,55260236,55260236,50148060,0.000625,5460460095,15551337,0.982926,0.458073,0.564782,12.435333,4556275,3922132
"2015-2593","AC-96","SMRI ""Array""","Homo sapiens",24,6.91,1321,2002,"M","CAUC",48,"Control",NA,NA,"CARDIAC","Right",8.2,"9/16/2015","CTL",67.874126,0.583667,67874126,67874126,60135940,0.000685,6675357855,18909016,0.979239,0.492136,0.583667,20.512235,8219351,7319487
"2015-2594","AC-97","SMRI ""Array""","Homo sapiens",30,6.72,1630,2002,"M","CAUC",46,"SCZ",22,24,"PNEUMONIA","Left",6.6,"9/16/2015","SCZ",71.131222,0.530625,71131222,71131222,64103304,0.000761,7008122477,20528093,0.983188,0.420101,0.530625,13.54729,5950732,5011229
"2015-2595","AC-98","SMRI ""Array""","Homo sapiens",23,6.07,1670,2002,"M","CAUC",56,"BP",28,28,"SUIC:OD","Right",9,"9/16/2015","BD",29.590694,0.396956,29590694,29590694,27429944,0.000669,2927294552,8332259,0.983256,0.585901,0.396956,8.284022,1813191,1446854
"2015-2603","AC-2","SMRI ""Array""","Homo sapiens",60,6.7,1430,1995,"M","CAUC",29,"BP",17,12,"SUIC:CO","Left",8.5,"9/21/2015","BD",44.214026,0.410026,44214026,44214026,40532904,0.000862,4377736846,13263660,0.981073,0.583209,0.410026,17.597797,5086858,4434143
"2015-2604","AC-4","SMRI ""Array""","Homo sapiens",28,6.35,1480,1996,"M","CAUC",45,"BP",35,10,"CARDIAC","Right",8.3,"9/21/2015","BD",65.39616,0.466779,65396160,65396160,59535924,0.000721,6484491159,18129250,0.98501,0.490333,0.466779,14.447484,6201345,5397745
"2015-2605","AC-5","SMRI ""Array""","Homo sapiens",70,6.71,1625,1996,"M","NatAM",41,"BP",22,19,"SUIC:OD","Left",8.3,"9/21/2015","BD",54.037796,0.437556,54037796,54037796,49163086,0.000622,5359394218,14706006,0.984749,0.497443,0.437556,12.429433,4800687,4156187
"2015-2606","AC-7","SMRI ""Array""","Homo sapiens",33,6.2,1480,1996,"M","CAUC",31,"SCZ",22,9,"CARDIAC","Right",7.7,"9/21/2015","SCZ",48.936778,0.450051,48936778,48936778,45610532,0.000651,4866962598,12645747,0.982582,0.443029,0.450051,6.673977,2416325,1799135
"2015-2607","AC-8","SMRI ""Array""","Homo sapiens",19,6.74,1660,1996,"M","CAUC",44,"BP",33,11,"SUIC:HANGING","Right",8.5,"9/21/2015","BD",82.536392,0.444489,82536392,82536392,74642446,0.000654,8160004420,23121393,0.983248,0.574472,0.444489,16.985178,10276591,8806030
"2015-2608","AC-9","SMRI ""Array""","Homo sapiens",52,6.51,1510,1996,"F","CAUC",45,"SCZ",34,11,"SUIC:JUMPED","Right",8.6,"9/21/2015","SCZ",63.065204,0.477866,63065204,63065204,57838294,0.000778,6274508941,19121596,0.984788,0.493376,0.477866,15.787456,6542996,5804805
"2015-2609","AC-10","SMRI ""Array""","Homo sapiens",34,6.18,1480,1996,"M","CAUC",40,"SCZ",21,19,"PNEUMONIA","Right",8.6,"9/21/2015","SCZ",87.27171,0.596769,87271710,87271710,77830846,0.000695,8613331494,23809228,0.979989,0.507174,0.596769,18.748665,10318400,9431915
"2015-2610","AC-12","SMRI ""Array""","Homo sapiens",28,6.73,1465,1997,"M","CAUC",19,"SCZ",18,1,"OD","Left",8.7,"9/21/2015","SCZ",40.34462,0.425968,40344620,40344620,36469932,0.000652,3988148235,11617118,0.982748,0.558109,0.425968,15.268671,4201838,3792218
"2015-2623","AC-14","SMRI ""Array""","Homo sapiens",18,6.5,1205,1997,"F","CAUC",48,"BP",33,15,"CARDIAC","Left",8.7,"9/23/2015","BD",67.031598,0.427927,67031598,67031598,62490228,0.000577,6649695034,18368843,0.974718,0.506532,0.427927,4.270183,3565197,2952328
"2015-2625","AC-22","SMRI ""Array""","Homo sapiens",30,6.8,1550,1997,"M","CAUC",37,"SCZ",13,24,"CARDIAC","Right",8.8,"9/23/2015","SCZ",72.57287,0.748903,72572870,72572870,64719812,0.000868,7201690380,21549703,0.98062,0.511133,0.748903,17.382679,7540424,6725268
"2015-2626","AC-23","SMRI ""Array""","Homo sapiens",17,6.1,1250,1997,"F","CAUC",35,"BP",21,14,"SUIC:CO","Right",8.1,"9/23/2015","BD",39.149188,0.429776,39149188,39149188,36648446,0.000642,3887555784,10451401,0.982043,0.529164,0.429776,3.436955,2131470,1639898
"2015-2627","AC-25","SMRI ""Array""","Homo sapiens",10,6.1,1450,1998,"M","CAUC",52,"SCZ",28,24,"CARDIAC","Right",6.2,"9/23/2015","SCZ",43.457568,0.518786,43457568,43457568,40462962,0.000661,4331564746,11596247,0.980992,0.478967,0.518786,3.488891,1907042,1454159
"2015-2628","AC-26","SMRI ""Array""","Homo sapiens",15,6.2,1505,1998,"M","CAUC",24,"SCZ",20,4,"SUIC:OD","Right",8.6,"9/23/2015","SCZ",51.376954,0.585728,51376954,51376954,47411560,8e-04,5110208154,14972330,0.982983,0.493672,0.585728,7.162256,3448627,2944740
"2015-2629","AC-30","SMRI ""Array""","Homo sapiens",28,6,1340,1998,"M","CAUC",53,"Control",NA,NA,"CARDIAC","Left",8.1,"9/23/2015","CTL",80.377326,0.68895,80377326,80377326,73227320,0.000843,7978408468,23153002,0.980364,0.489615,0.68895,11.937051,6034879,5166882
"2015-2630","AC-31","SMRI ""Array""","Homo sapiens",9,5.9,1415,1998,"M","CAUC",44,"SCZ",19,25,"EXHAUSTIVE MANIA/NMS","Left",8,"9/23/2015","SCZ",73.2425,0.684593,73242500,73242500,66614464,0.000791,7265467951,21507167,0.97909,0.469222,0.684593,11.315993,5568839,4787701
"2015-2881","AC-34","SMRI ""Array""","Homo sapiens",35,6.5,1440,1998,"F","CAUC",58,"BP",27,31,"SUIC:GSW","Left",8.8,"10/15/2015","BD",51.86286,0.254055,51862860,51862860,48848906,0.000553,5132104722,13869486,0.980337,0.539547,0.254055,4.80045,2841266,2318249
"2015-2882","AC-35","SMRI ""Array""","Homo sapiens",28,6.7,1350,1998,"F","CAUC",38,"Control",NA,NA,"CARDIAC","Right",8.2,"10/15/2015","CTL",43.558204,0.250368,43558204,43558204,40768462,0.000543,4302939697,12470808,0.980106,0.61146,0.250368,9.895576,3700463,3214741
"2015-2884","AC-37","SMRI ""Array""","Homo sapiens",80,6.6,1355,1998,"M","CAUC",39,"SCZ",17,22,"MVA","Left",8.1,"10/15/2015","SCZ",26.719856,0.262423,26719856,26719856,24701710,0.000532,2623146405,7518482,0.9824,0.629346,0.262423,12.264012,2901575,2502122
"2015-2885","AC-39","SMRI ""Array""","Homo sapiens",29,6.5,1470,1999,"M","CAUC",33,"SCZ",19,14,"CARDIAC","Left",8.1,"10/15/2015","SCZ",43.996284,0.25091,43996284,43996284,41522004,0.000537,4364650909,11564009,0.983365,0.561885,0.25091,4.037859,2317157,1735012
"2015-2886","AC-41","SMRI ""Array""","Homo sapiens",18,6.3,1520,1999,"M","CAUC",43,"SCZ",18,25,"CIRRHOSIS","Right",8.3,"10/15/2015","SCZ",36.41173,0.323191,36411730,36411730,33951924,0.000513,3588940686,9813643,0.983471,0.522266,0.323191,5.78904,2163736,1662530
"2015-2887","AC-43","SMRI ""Array""","Homo sapiens",52,6.7,1700,1999,"M","CAUC",35,"Control",NA,NA,"MYOCARDITIS","Right",7.6,"10/15/2015","CTL",44.976912,0.370212,44976912,44976912,40849136,0.000593,4353661009,12785000,0.978379,0.543059,0.370212,17.800439,5851029,5158981
"2015-2888","AC-45","SMRI ""Array""","Homo sapiens",47,6.4,1370,1999,"M","CAUC",35,"SCZ",14,21,"CARDIAC","Right",7.4,"10/15/2015","SCZ",40.621336,0.269406,40621336,40621336,38383002,0.000556,4007598724,11377843,0.982551,0.56131,0.269406,4.760364,2481217,1773177
"2015-2917","AC-46","SMRI ""Array""","Homo sapiens",84,6.65,1300,1999,"M","CAUC",59,"BP",25,34,"SLEEP APNEA","Right",8,"10/20/2015","BD",65.278716,0.404069,65278716,65278716,60289470,0.000566,6379022530,16894999,0.976893,0.452219,0.404069,8.242922,4584711,3687249
"2015-2918","AC-51","SMRI ""Array""","Homo sapiens",21,6.81,1550,2000,"M","CAUC",47,"Control",NA,NA,"CARDIAC","Left",8,"10/20/2015","CTL",125.618036,0.60881,125618036,125618036,113929270,0.000585,11966733629,33347374,0.954203,0.469256,0.60881,24.94073,23686443,22146736
"2015-2919","AC-52","SMRI ""Array""","Homo sapiens",29,6.94,1405,2000,"M","CAUC",45,"Control",NA,NA,"CARDIAC","Right",8.4,"10/20/2015","CTL",29.188568,0.286112,29188568,29188568,27222006,5e-04,2855643031,7888733,0.97948,0.61641,0.286112,8.355554,2591771,1962684
"2015-2921","AC-54","SMRI ""Array""","Homo sapiens",37,6.91,1340,2000,"M","CAUC",42,"Control",NA,NA,"CARDIAC","Left",7.8,"10/20/2015","CTL",48.03109,0.46726,48031090,48031090,43774082,0.000675,4672096188,13876202,0.976639,0.499605,0.46726,16.785885,5345883,4645656
"2015-2922","AC-55","SMRI ""Array""","Homo sapiens",13,6.3,1310,2000,"M","CAUC",47,"SCZ",20,27,"ACUTE PANCREAT","Left",8.1,"10/20/2015","SCZ",38.55192,0.365916,38551920,38551920,35707820,0.000483,3776066983,10361992,0.979999,0.547359,0.365916,7.46386,2626826,2143487
"2015-2923","AC-56","SMRI ""Array""","Homo sapiens",10,6.2,1305,2000,"F","CAUC",44,"Control",NA,NA,"CARDIAC","Right",7.9,"10/20/2015","CTL",63.145718,0.463268,63145718,63145718,57527788,0.00052,6147209389,16897712,0.983133,0.481255,0.463268,11.910748,5821365,5085777
"2015-2924","AC-57","SMRI ""Array""","Homo sapiens",23,6.67,1590,2000,"M","CAUC",51,"BP",23,28,"CARDIAC","Right",8.1,"10/20/2015","BD",65.578954,0.48247,65578954,65578954,59414952,0.000562,6389272395,18221259,0.982191,0.54667,0.48247,18.16881,8110966,7307012
"2015-2945","AC-61","SMRI ""Array""","Homo sapiens",37,6.37,1200,2000,"F","CAUC",44,"BP",26,18,"MYOCARDITIS","Right",6.4,"10/22/2015","BD",67.750834,0.449823,67750834,67750834,62754006,0.000558,6676219997,17548657,0.978655,0.436657,0.449823,7.682436,4108167,3140405
"2015-2946","AC-62","SMRI ""Array""","Homo sapiens",26,6.58,1170,2000,"F","CAUC",56,"BP",14,42,"DROWNING","Left",7.8,"10/22/2015","BD",63.867966,0.612812,63867966,63867966,58043200,0.000649,6285200098,17707323,0.980861,0.455451,0.612812,14.119737,5391040,4800230
"2015-2947","AC-63","SMRI ""Array""","Homo sapiens",39,6.74,1505,2000,"F","CAUC",43,"BP",25,18,"SUIC:OD","Left",8.4,"10/22/2015","BD",97.116178,0.551471,97116178,97116178,85830196,0.000629,9474889790,27534122,0.983156,0.485579,0.551471,19.434277,11977761,10800122
"2015-2948","AC-64","SMRI ""Array""","Homo sapiens",22,6.58,1390,2000,"M","CAUC",35,"BP",14,21,"DROWNING","Right",8.7,"10/22/2015","BD",51.740908,0.408287,51740908,51740908,46310330,0.000629,5059674031,14562130,0.984574,0.536264,0.408287,16.428833,5890770,5238109
"2015-2949","AC-68","SMRI ""Array""","Homo sapiens",27,6.49,1480,2000,"F","CAUC",36,"SCZ",33,3,"SUIC:HANGING","Left",7.9,"10/22/2015","SCZ",90.566722,0.554566,90566722,90566722,82589036,0.000628,8849677245,24781765,0.980407,0.480028,0.554566,13.224402,8589089,7337406
"2015-2950","AC-69","SMRI ""Array""","Homo sapiens",62,6.51,1400,2000,"F","CAUC",50,"BP",25,25,"SUIC:OD","Left",8,"10/22/2015","BD",129.182748,0.649413,129182748,129182748,112472996,0.000702,12512504659,36879152,0.981718,0.467367,0.649413,22.887677,18563477,16896418
"2015-2951","AC-77","SMRI ""Array""","Homo sapiens",29,6.52,1360,2001,"F","CAUC",33,"Control",NA,NA,"ASTHMA","Left",7.2,"10/22/2015","CTL",156.063492,0.499922,156063492,156063492,140501762,0.000596,15144695653,41554117,0.971246,0.483673,0.499922,16.54918,17656766,15165056
"2015-2952","AC-85","SMRI ""Array""","Homo sapiens",35,6.68,1210,2001,"M","HiSP",38,"SCZ",17,21,"OD","Left",8.5,"10/22/2015","SCZ",64.839814,0.36863,64839814,64839814,60192732,0.000626,6356041979,18150587,0.981318,0.525553,0.36863,9.339341,4904886,4004597
"2015-3","N-19","SMRI ""New""","Homo sapiens",43,6.52,1440,2002,"M","AS",49,"BP",34,15,"SUIC:HANGING","Left",8.3,"12/31/2014","BD",85.46587,0.568747,85465870,85465870,76091858,0.00082,8407177988,25210751,0.983533,0.38064,0.568747,11.149217,6275628,5167594
"2015-3079","AC-86","SMRI ""Array""","Homo sapiens",31,6.67,1360,2001,"M","CAUC",46,"Control",NA,NA,"CARDIAC","Left",7.9,"11/3/2015","CTL",71.75274,0.354725,71752740,71752740,66366624,0.000586,7051133931,19709371,0.982206,0.470381,0.354725,7.099587,4385061,3395150
"2015-3080","AC-89","SMRI ""Array""","Homo sapiens",57,5.92,1340,2001,"F","CAUC",43,"BP",29,14,"OD","Left",7.7,"11/3/2015","BD",87.200344,0.594994,87200344,87200344,79000126,0.000732,8577422986,24479307,0.980787,0.426205,0.594994,14.196187,7280644,6418138
"2015-3081","AC-90","SMRI ""Array""","Homo sapiens",38,6.67,1498,2001,"M","CAUC",40,"Control",NA,NA,"CARDIAC","Left",8.6,"11/3/2015","CTL",73.312276,0.482094,73312276,73312276,65779710,0.000665,7141852809,21034292,0.977566,0.536039,0.482094,17.987001,8946969,7833209
"2015-3082","AC-93","SMRI ""Array""","Homo sapiens",35,6.5,1575,2002,"F","CAUC",47,"SCZ",20,27,"CARDIAC","Left",8.5,"11/3/2015","SCZ",82.025112,0.568079,82025112,82025112,71536032,0.000658,7944571588,24364102,0.980677,0.501047,0.568079,23.606159,12284090,11159905
"2015-3083","AC-95","SMRI ""Array""","Homo sapiens",11,6.13,1335,2002,"M","CAUC",31,"Control",NA,NA,"PULM EMBOL","Right",7.5,"11/3/2015","CTL",70.208226,0.560484,70208226,70208226,64824298,0.000602,6857873833,18969092,0.976459,0.466278,0.560484,14.163177,6974496,6168827
"2015-3084","AC-99","SMRI ""Array""","Homo sapiens",58,6.46,1260,2002,"F","CAUC",39,"Control",NA,NA,"CARDIAC","Right",7.9,"11/3/2015","CTL",54.317634,0.521555,54317634,54317634,49336990,0.000748,5371769084,15914318,0.98285,0.443901,0.521555,12.132872,4336668,3794810
"2015-3085","AC-102","SMRI ""Array""","Homo sapiens",23,6.9,1466,2002,"M","CAUC",48,"BP",31,17,"SUIC:HANGING","Left",7.7,"11/3/2015","BD",46.367268,0.520555,46367268,46367268,41888106,0.000603,4586700933,12560540,0.981764,0.475676,0.520555,15.344538,4231516,3796419
"2015-3086","AC-103","SMRI ""Array""","Homo sapiens",36,6.57,1535,2002,"M","CAUC",47,"Control",NA,NA,"CARDIAC","Left",7.9,"11/3/2015","CTL",44.944146,0.273828,44944146,44944146,41925550,0.000543,4390083304,12333463,0.977933,0.609523,0.273828,6.707433,3791680,2768764
"2015-3164","AC-6","SMRI ""Array""","Homo sapiens",62,6.74,1330,1996,"F","CAUC",29,"BP",18,11,"OD","Left",7.5,"11/16/2015","BD",50.832286,0.352788,50832286,50832286,46957220,0.00065,5049283928,13901559,0.980521,0.440806,0.352788,8.840863,2806292,2260809
"2015-3165","AC-17","SMRI ""Array""","Homo sapiens",13,6.49,1345,1997,"F","CAUC",53,"SCZ",29,24,"CARDIAC","Left",8.2,"11/16/2015","SCZ",48.589108,0.26803,48589108,48589108,45281886,0.000536,4824737502,12840416,0.983081,0.543153,0.26803,6.537895,3871522,3363316
"2015-3166","AC-19","SMRI ""Array""","Homo sapiens",46,6.5,1605,1997,"M","CAUC",49,"Control",NA,NA,"CARDIAC","Right",7.1,"11/16/2015","CTL",38.06382,0.35116,38063820,38063820,35048978,0.000607,3762384545,10298896,0.981525,0.496229,0.35116,9.506952,3359062,2902973
"2015-3167","AC-79","SMRI ""Array""","Homo sapiens",31,6.86,1580,2001,"M","CAUC",48,"Control",NA,NA,"CARDIAC","Right",8.4,"11/16/2015","CTL",67.910468,0.361933,67910468,67910468,61559936,0.000705,6746096988,19397100,0.981924,0.505572,0.361933,9.333019,5352834,4604788
"2015-3168","AC-32","SMRI ""Array""","Homo sapiens",49,6.65,1335,2002,"F","CAUC",42,"BP",20,22,"OD","Left",7.6,"11/16/2015","BD",79.39126,0.481683,79391260,79391260,73003202,0.000645,7863825767,21205093,0.977669,0.457962,0.481683,11.209124,6325766,5389750
"2015-3169","AC-60","SMRI ""Array""","Homo sapiens",18,6.81,1585,2000,"M","CAUC",45,"Control",NA,NA,"CARDIAC","Left",8.3,"11/16/2015","CTL",31.725638,0.31797,31725638,31725638,29152936,0.00054,3133272045,8647092,0.972787,0.622192,0.31797,14.263749,3416403,2947183
"2015-3170","AC-71","SMRI ""Array""","Homo sapiens",45,6.72,1435,2000,"F","CAUC",49,"Control",NA,NA,"CARDIAC","Left",7.7,"11/16/2015","CTL",43.196618,0.459878,43196618,43196618,39035448,0.000765,4275485557,12636277,0.979939,0.515935,0.459878,20.410495,5249641,4780976
"2015-3227","AC-73","SMRI ""Array""","Homo sapiens",38,6.17,1400,2000,"M","CAUC",53,"SCZ",23,30,"CARDIAC","Right",8,"12/3/2015","SCZ",72.796804,0.386777,72796804,72796804,67804774,0.000685,7208652811,20199923,0.983943,0.447705,0.386777,5.58735,3786390,2844925
"2015-3228","AC-76","SMRI ""Array""","Homo sapiens",28,6.44,1360,2001,"F","CAUC",41,"BP",14,27,"CARDIAC","Left",6.5,"12/3/2015","BD",87.877492,0.502338,87877492,87877492,80252690,0.00064,8643600538,23192701,0.98246,0.450689,0.502338,8.370472,6089191,5060770
"2015-3229","AC-40","SMRI ""Array""","Homo sapiens",9,6.2,1400,1999,"M","CAUC",50,"SCZ",31,19,"CARDIAC","Right",7.6,"12/3/2015","SCZ",121.788856,0.475071,121788856,121788856,111495476,0.000668,12063709058,33388075,0.983165,0.424126,0.475071,8.7266,8638021,7042812
"2015-3230","AC-20","SMRI ""Array""","Homo sapiens",53,6.2,1410,1997,"F","CAUC",59,"BP",48,11,"SUIC:OD","Right",8.1,"12/3/2015","BD",45.389068,0.393903,45389068,45389068,41297408,0.000689,4492151150,13165392,0.983012,0.474119,0.393903,8.615616,3348834,2791304
"2015-3231","AC-80","SMRI ""Array""","Homo sapiens",49,6.75,1645,2001,"M","CAUC",50,"Control",NA,NA,"CARDIAC","Right",8.1,"12/3/2015","CTL",102.248116,0.384984,102248116,102248116,92197170,0.000678,10141964815,30579137,0.985745,0.518535,0.384984,14.07962,11516034,10022630
"2015-3232","AC-81","SMRI ""Array""","Homo sapiens",30,6.47,1430,2001,"F","CAUC",47,"SCZ",23,24,"OD","Right",7.4,"12/3/2015","SCZ",77.021248,0.466429,77021248,77021248,70896364,0.000555,7641636568,18819145,0.981112,0.444354,0.466429,7.656886,4682850,3914403
"2015-3233","AC-94","SMRI ""Array""","Homo sapiens",19,6.48,1310,2002,"M","CAUC",42,"SCZ",18,24,"CARDIAC","Right",8.6,"12/3/2015","SCZ",79.025484,0.346129,79025484,79025484,72662918,0.000654,7855153151,22937381,0.98623,0.518255,0.346129,9.309258,6944586,5772884
"2015-3234","AC-1","SMRI ""Array""","Homo sapiens",48,6.39,1570,1994,"M","CAUC",29,"BP",22,7,"SUIC:JUMPED","Left",8.6,"12/3/2015","BD",74.088612,0.304508,74088612,74088612,68226386,0.000645,7362072800,21932350,0.98724,0.575963,0.304508,9.49519,7017542,5810764
"2015-3235","AC-11","SMRI ""Array""","Homo sapiens",43,6.63,1390,1997,"M","CAUC",51,"SCZ",23,28,"CARDIAC","Left",8.2,"12/3/2015","SCZ",77.273638,0.426213,77273638,77273638,69616806,0.000718,7610635318,22001528,0.985822,0.524877,0.426213,17.312314,10154806,8964561
"2015-3236","AC-13","SMRI ""Array""","Homo sapiens",19,5.87,1380,1997,"F","CAUC",49,"BP",22,27,"SUIC:MVA","Right",6.8,"12/3/2015","BD",99.412608,0.49281,99412608,99412608,91641916,0.000551,9821556089,24429589,0.981885,0.470209,0.49281,8.277658,7647480,6148356
"2015-3237","AC-15","SMRI ""Array""","Homo sapiens",28,6.59,1330,1997,"F","CAUC",44,"Control",NA,NA,"CARDIAC","Right",8.8,"12/3/2015","CTL",45.938154,0.387279,45938154,45938154,42168618,0.000664,4559442636,13616017,0.986163,0.552292,0.387279,14.04337,4806491,4051736
"2015-3238","AC-18","SMRI ""Array""","Homo sapiens",35,6.3,1490,1997,"M","CAUC",35,"BP",19,16,"CARDIAC","Left",8.4,"12/3/2015","BD",61.324598,0.421911,61324598,61324598,57186492,0.000722,6075025035,19050071,0.98506,0.562629,0.421911,11.00029,4979153,3984196
"2015-3275","AC-24","SMRI ""Array""","Homo sapiens",9,6.4,1500,1997,"M","CAUC",53,"Control",NA,NA,"CARDIAC","Left",8.1,"12/7/2015","CTL",53.698292,0.320207,53698292,53698292,50192608,0.000593,5346679244,14703214,0.985492,0.496581,0.320207,6.006356,3341505,2656121
"2015-3276","AC-29","SMRI ""Array""","Homo sapiens",31,6.7,1400,1998,"M","CAUC",51,"Control",NA,NA,"CARDIAC","Right",8.7,"12/7/2015","CTL",51.295126,0.280472,51295126,51295126,47318392,0.000632,5093449959,15444050,0.986419,0.592234,0.280472,11.795702,5266733,4332747
"2015-3277","AC-33","SMRI ""Array""","Homo sapiens",33,6,1120,1998,"F","CAUC",38,"Control",NA,NA,"CARDIAC","Right",8.4,"12/7/2015","CTL",43.413556,0.325285,43413556,43413556,40060386,0.000648,4306404009,12488766,0.98441,0.56673,0.325285,13.043433,4221762,3618640
"2015-3278","AC-21","SMRI ""Array""","Homo sapiens",44,6.5,1510,1997,"M","CAUC",54,"BP",45,9,"SUIC:OD","Left",7.1,"12/7/2015","BD",63.277756,0.428179,63277756,63277756,58086372,0.000802,6260205027,18882349,0.980937,0.40945,0.428179,10.990845,4299958,3172178
"2015-3279","AC-53","SMRI ""Array""","Homo sapiens",24,6.87,1255,2000,"F","CAUC",34,"Control",NA,NA,"CARDIAC","Right",8.3,"12/7/2015","CTL",57.533676,0.37214,57533676,57533676,53102332,0.000625,5637712604,15881915,0.974737,0.541275,0.37214,15.297786,7458866,6493228
"2015-3280","AC-3","SMRI ""Array""","Homo sapiens",26,6.42,1620,1995,"M","CAUC",43,"SCZ",21,22,"PNEUMONIA","Left",7.5,"12/7/2015","SCZ",52.45487,0.384515,52454870,52454870,48523548,0.000597,5151212733,13149566,0.978348,0.497387,0.384515,10.995068,5583917,4449298
"2015-3281","AC-27","SMRI ""Array""","Homo sapiens",13,6.5,1600,1998,"M","CAUC",37,"Control",NA,NA,"CARDIAC","Left",8.1,"12/7/2015","CTL",59.078738,0.529851,59078738,59078738,52897152,0.000708,5792361586,16190149,0.976968,0.464288,0.529851,20.10219,8101646,7464114
"2015-3282","AC-101","SMRI ""Array""","Homo sapiens",16,6.52,1340,2002,"M","CAUC",52,"SCZ",19,33,"PNEUMONIA","Right",7,"12/7/2015","SCZ",45.256708,0.507225,45256708,45256708,40840576,0.000657,4443803602,12748419,0.981717,0.489145,0.507225,17.044324,5225412,4519688
"2015-3283","AC-104","SMRI ""Array""","Homo sapiens",12,5.97,1484,2002,"M","CAUC",19,"BP",17,2,"OD","Right",7.4,"12/7/2015","BD",148.238904,0.691858,148238904,148238904,132938072,0.000869,14384226539,42533942,0.975839,0.450002,0.691858,21.753496,21490005,18651657
"2015-3284","AC-105","SMRI ""Array""","Homo sapiens",50,6.17,1290,2002,"F","CAUC",41,"Control",NA,NA,"CARDIAC","Right",7,"12/7/2015","CTL",74.587812,0.665679,74587812,74587812,68085208,0.000688,7286835078,19053714,0.979035,0.443713,0.665679,16.80785,7475891,6436368
"2015-35","N-25","SMRI ""New""","Homo sapiens",61,6.43,1390,2003,"F","CAUC",19,"BP",14,5,"SUIC:INHALED HELIUM","Right",6.1,"1/7/2015","BD",96.83317,0.612615,96833170,96833170,86866810,0.000817,9485878950,26655029,0.969734,0.375524,0.612615,14.077038,8163088,6845747
"2015-36","N-26","SMRI ""New""","Homo sapiens",65,6.59,1415,2003,"M","CAUC",24,"BP",18,6,"OD","Right",7.4,"1/7/2015","BD",87.82829,0.658718,87828290,87828290,78117086,0.00077,8445287851,25175003,0.926186,0.362738,0.658718,18.553665,11457656,9831269
"2015-37","N-27","SMRI ""New""","Homo sapiens",12,6.84,1390,2003,"M","CAUC",41,"Control",NA,NA,"CARDIAC","Left",8.5,"1/7/2015","CTL",110.446018,0.585013,110446018,110446018,99842158,0.000774,10645347968,32901053,0.938373,0.351014,0.585013,13.38184,11444595,9704818
"2015-38","N-28","SMRI ""New""","Homo sapiens",22,6.39,1379,2003,"F","CAUC",40,"SCZ",16,24,"CARDIAC","Right",7.9,"1/7/2015","SCZ",132.18358,0.616753,132183580,132183580,119041284,0.000717,12821528133,37828530,0.969749,0.394626,0.616753,11.337392,9882598,7829393
"2015-39","N-29","SMRI ""New""","Homo sapiens",37,6.52,1363,2003,"M","CAUC",64,"BP",32,32,"SUIC:OD","Left",8.1,"1/7/2015","BD",94.956634,0.587836,94956634,94956634,85824382,0.000579,9015006040,25262933,0.881887,0.384743,0.587836,17.462867,12818082,11272600
"2015-4","N-20","SMRI ""New""","Homo sapiens",36,6.77,1080,2002,"F","CAUC",49,"BP",21,28,"SUIC:JUMPED","Left",7.7,"12/31/2014","BD",89.52661,0.583862,89526610,89526610,78079736,0.000825,8786831206,27000871,0.982933,0.38315,0.583862,15.352435,9255269,7049968
"2015-40","N-30","SMRI ""New""","Homo sapiens",34,6.92,1423,2003,"M","CAUC",45,"Control",NA,NA,"CARDIAC","Right",8.3,"1/7/2015","CTL",105.061582,0.613063,105061582,105061582,94813408,0.000609,9866765714,26116027,0.829339,0.369304,0.613063,19.811504,18080415,16459088
"2015-41","N-31","SMRI ""New""","Homo sapiens",52,6.4,1520,2003,"F","CAUC",42,"BP",NA,NA,"CARDIAC","Left",6.8,"1/7/2015","BD",108.952494,0.615347,108952494,108952494,96535082,0.000823,10458528200,31463838,0.934022,0.359876,0.615347,17.506005,13517579,11643917
"2015-42","N-32","SMRI ""New""","Homo sapiens",32,6.65,1670,2003,"M","CAUC",28,"SCZ",25,3,"SUIC:JUMPED","Left",8.5,"1/7/2015","SCZ",109.483286,0.624991,109483286,109483286,98818518,0.00063,10416808195,28656607,0.874414,0.354,0.624991,16.588057,15413318,13740381
"2015-43","N-33","SMRI ""New""","Homo sapiens",62,6.73,1140,2003,"M","CAUC",47,"SCZ",25,22,"OD","Right",7.6,"1/7/2015","SCZ",90.761102,0.642829,90761102,90761102,81757172,0.000687,8646217599,24262653,0.889881,0.357873,0.642829,18.29661,12739322,11242694
"2015-45","N-35","SMRI ""New""","Homo sapiens",18,6.46,1233,2003,"F","CAUC",29,"BP",28,1,"SUIC:OD","Left",7.7,"1/7/2015","BD",95.507698,0.625145,95507698,95507698,86441970,0.000732,9215392349,26110200,0.923777,0.352907,0.625145,14.375088,10053081,8655442
"2015-46","N-36","SMRI ""New""","Homo sapiens",15,6.61,1338,2003,"F","CAUC",28,"SCZ",18,10,"OD","Left",7.8,"1/7/2015","SCZ",113.746736,0.628332,113746736,113746736,102352904,0.000655,10947422790,30845858,0.927871,0.362558,0.628332,14.066632,12348688,10623599
"2015-6","N-22","SMRI ""New""","Homo sapiens",20,6.71,1545,2003,"M","CAUC",44,"Control",NA,NA,"CARDIAC","Right",8.5,"12/31/2014","CTL",96.092628,0.58098,96092628,96092628,84376872,0.000822,9450358704,30526989,0.984674,0.373086,0.58098,12.532729,8184320,6787601
"2015-7","N-23","SMRI ""New""","Homo sapiens",9,6.57,1305,2003,"F","CAUC",61,"SCZ",23,38,"PNEUMONIA","Right",8.1,"12/31/2014","SCZ",96.932604,0.554935,96932604,96932604,86186184,0.000718,9484797567,28665677,0.983804,0.402319,0.554935,10.499033,6773116,5483709
"2015-8","N-24","SMRI ""New""","Homo sapiens",13,6.58,1376,2003,"F","CAUC",56,"BP",35,21,"CARDIAC","Right",8.3,"12/31/2014","BD",89.480328,0.535662,89480328,89480328,79946800,0.000737,8762871155,27101883,0.986584,0.387246,0.535662,8.889265,5914885,4734946
"2015-854","N-37","SMRI ""New""","Homo sapiens",35,6.67,1227,2003,"F","CAUC",53,"BP",33,20,"SUIC:OD","Left",7.1,"4/2/2015","BD",119.167398,0.554429,119167398,119167398,108696148,0.00078,11696352751,35039244,0.985895,0.364272,0.554429,10.60625,8655371,6887602
"2015-855","N-39","SMRI ""New""","Homo sapiens",115,6.51,1594,2003,"M","CAUC",46,"BP",20,26,"SUIC:STABBED","Left",5.6,"4/2/2015","BD",106.99414,0.630915,106994140,106994140,95758114,0.001058,10476422829,34760368,0.987004,0.385223,0.630915,16.001545,9258437,7670137
"2015-856","N-40","SMRI ""New""","Homo sapiens",32,6.54,1360,2004,"F","CAUC",49,"SCZ",22,27,"TRAUMA--INTERNAL BLEEDING","Right",6.4,"4/2/2015","SCZ",125.214248,0.558589,125214248,125214248,113990378,0.000835,12291719010,36816515,0.985358,0.374657,0.558589,11.534268,8163772,6638327
"2015-857","N-41","SMRI ""New""","Homo sapiens",29,6.83,1625,2004,"M","CAUC",38,"Control",NA,NA,"CARDIAC","Left",7,"4/2/2015","CTL",84.310028,0.562304,84310028,84310028,76814946,0.000856,8282709933,24961073,0.986968,0.370116,0.562304,11.367723,5123670,4088075
"2015-858","N-42","SMRI ""New""","Homo sapiens",21,6.67,1404,2004,"F","CAUC",44,"BP",25,19,"OD","Right",7.4,"4/2/2015","BD",123.08136,0.597124,123081360,123081360,110802018,0.000933,12101507505,37616146,0.987551,0.383835,0.597124,12.58934,9405625,7783465
"2015-859","N-43","SMRI ""New""","Homo sapiens",38,5.92,1350,2004,"M","CAUC",45,"SCZ",32,13,"UNDETERMINED","Left",6.9,"4/2/2015","SCZ",99.958574,0.52318,99958574,99958574,91662164,0.000816,9844385513,28635533,0.986025,0.373443,0.52318,8.282758,5770972,4503465
"2015-860","N-45","SMRI ""New""","Homo sapiens",33,6.48,1310,2004,"F","CAUC",36,"BP",15,21,"OD","Right",6.8,"4/2/2015","BD",128.088456,0.539028,128088456,128088456,117060542,0.000942,12579185296,36835168,0.986399,0.374988,0.539028,11.043771,8509312,6936937
"2015-861","N-46","SMRI ""New""","Homo sapiens",49,6.43,1380,2004,"F","CAUC",45,"SCZ",23,22,"CARDIAC","Right",6,"4/2/2015","SCZ",101.326772,0.581779,101326772,101326772,92125124,0.000824,9941387609,28342242,0.985326,0.373673,0.581779,12.745858,6600750,5151808
"2015-862","N-48","SMRI ""New""","Homo sapiens",32,6.84,1360,2004,"M","CAUC",57,"Control",NA,NA,"CARDIAC","Right",8.1,"4/2/2015","CTL",102.361374,0.542635,102361374,102361374,93132238,0.00084,10077635349,30500516,0.987621,0.367494,0.542635,10.565785,7089754,5829632
"2015-863","N-49","SMRI ""New""","Homo sapiens",21,6.51,1410,2004,"M","CAUC",54,"Control",NA,NA,"CARDIAC","Right",8.5,"4/2/2015","CTL",111.705724,0.575758,111705724,111705724,100914608,0.000851,10983412693,33300142,0.987439,0.368188,0.575758,12.039941,7661158,6332300
"2015-864","N-51","SMRI ""New""","Homo sapiens",11,6.02,1540,2004,"M","CAUC",63,"BP",26,37,"SUIC:OD","Left",6.5,"4/2/2015","BD",106.44741,0.573359,106447410,106447410,96796712,0.000698,10448694060,27398753,0.982557,0.395729,0.573359,10.94062,6746652,5426152
"2015-865","N-52","SMRI ""New""","Homo sapiens",40,6.29,1340,2005,"M","CAUC",44,"SCZ",16,28,"CARDIAC","Left",7.4,"4/2/2015","SCZ",116.17452,0.62322,116174520,116174520,105355878,0.000809,11416773900,32554404,0.985698,0.37762,0.62322,10.327873,7289606,5788739
"2015-891","N-38","SMRI ""New""","Homo sapiens",38,6.62,1099,2003,"F","CAUC",59,"SCZ",21,38,"ASPHYXIA","Right",8.1,"4/7/2015","SCZ",104.619474,0.597597,104619474,104619474,94772102,0.000832,10205519067,30376949,0.98047,0.367045,0.597597,12.455263,9058605,7606004
"2015-892","N-44","SMRI ""New""","Homo sapiens",90,6.33,1551,2004,"M","CAUC",54,"Control",NA,NA,"PULM EMBOL","Right",6.3,"4/7/2015","CTL",113.97396,0.612297,113973960,113973960,101684450,0.000831,11104395813,32684179,0.983012,0.403697,0.612297,16.024672,9848809,8364757
"2015-893","N-50","SMRI ""New""","Homo sapiens",20,6.3,1470,2004,"M","CAUC",63,"Control",NA,NA,"CARDIAC","Right",8.5,"4/7/2015","CTL",110.39939,0.56828,110399390,110399390,99845506,0.000779,10772509464,31600185,0.980624,0.372685,0.56828,12.784042,9140093,7706845
"2015-894","N-53","SMRI ""New""","Homo sapiens",33,6.32,1380,2005,"M","CAUC",52,"SCZ",23,29,"CARDIAC","Right",7.9,"4/7/2015","SCZ",117.20337,0.610742,117203370,117203370,105806366,0.000793,11407377734,33796584,0.981404,0.377737,0.610742,12.524453,9995352,8388980
"2015-895","N-54","SMRI ""New""","Homo sapiens",24,6.59,1510,2005,"M","CAUC",57,"Control",NA,NA,"CARDIAC","Left",8.5,"4/7/2015","CTL",122.989484,0.562963,122989484,122989484,112204326,0.000766,11879328718,33314912,0.967242,0.36991,0.562963,14.725957,13263948,11583761
"2015-896","N-55","SMRI ""New""","Homo sapiens",17,6.65,1460,2005,"M","CAUC",57,"Control",NA,NA,"CARDIAC","Left",9,"4/7/2015","CTL",82.732338,0.366295,82732338,82732338,77479106,7e-04,8118920479,23144482,0.981788,0.412947,0.366295,4.710226,5887919,3914528
"2015-897","N-56","SMRI ""New""","Homo sapiens",38,6.4,1540,2005,"M","CAUC",46,"SCZ",16,30,"OD","Right",9.2,"4/7/2015","SCZ",112.834948,0.649509,112834948,112834948,101674418,0.000741,10861489415,30625124,0.965598,0.362265,0.649509,16.29156,14011202,12521761
"2015-898","N-57","SMRI ""New""","Homo sapiens",39,6.66,1600,2005,"M","CAUC",63,"BP",22,41,"CARDIAC","Right",8.9,"4/7/2015","BD",113.664856,0.584025,113664856,113664856,102792908,0.000893,11092460811,33704356,0.980593,0.365235,0.584025,12.383857,10124194,8554157
"2015-899","N-58","SMRI ""New""","Homo sapiens",35,6.88,1570,2005,"M","CAUC",48,"BP",23,25,"SUIC:DROWNED","Left",8.8,"4/7/2015","BD",105.07516,0.584989,105075160,105075160,95489000,0.000721,10142448716,29549762,0.966776,0.384676,0.584989,15.227885,12790824,11283387


Name,Model,TrainedOn,Extracts,DatasetLink
assertion_dl,AssertionDLModel,"Trained on 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text with `embeddings_clinical`","hypothetical, present, absent, possible, conditional, associated_with_someone_else",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
assertion_ml,AssertionLogRegModel,"Trained on 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text with `embeddings_clinical`","hypothetical, present, absent, possible, conditional, associated_with_someone_else",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
assertion_dl_large,AssertionDLModel,"Trained on 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text with `embeddings_clinical`","hypothetical, present, absent, possible, conditional, associated_with_someone_else",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
chunkresolve_cpt_clinical,ChunkEntityResolverModel,Trained on Current Procedural Terminology dataset,,
chunkresolve_icd10cm_clinical,ChunkEntityResolverModel,Trained on ICD10 Clinical Modification datasetwith tenths of variations per code,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/
chunkresolve_icd10pcs_clinical,ChunkEntityResolverModel,Trained on ICD10 Procedure Coding System dataset,ICD10-PCS Codes and their normalized definition,https://www.icd10data.com/ICD10PCS/Codes
chunkresolve_icdo_clinical,ChunkEntityResolverModel,Trained on ICD-O Histology Behaviour dataset,ICD-O Codes and their normalized definition,https://apps.who.int/iris/bitstream/handle/10665/96612/9789241548496_eng.pdf
deidentify_rb,DeIdentificationModel,Rule based DeIdentifier based on `ner_deid`,,
deidentify_rb_no_regex,DeIdentificationModel,Rule based DeIdentifier based on `ner_deid`,,
embeddings_clinical,WordEmbeddingsModel,Trained on PubMed corpora,,
embeddings_healthcare,WordEmbeddingsModel,Trained on PubMed + ICD10 + UMLS + MIMIC III corpora,,
embeddings_healthcare_100d,WordEmbeddingsModel,Trained on PubMed + ICD10 + UMLS + MIMIC III corpora,,
embeddings_healthcare_200d,WordEmbeddingsModel,Trained on PubMed + ICD10 + UMLS + MIMIC III corpora,,
embeddings_healthcare_300d,WordEmbeddingsModel,Trained on PubMed + ICD10 + UMLS + MIMIC III corpora,,
embeddings_scielo_50d,WordEmbeddingsModel,Trained on Scielo Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_scielo_150d,WordEmbeddingsModel,Trained on Scielo Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_scielo_300d,WordEmbeddingsModel,Trained on Scielo Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_wiki_50d,WordEmbeddingsModel,Trained on Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_wiki_150d,WordEmbeddingsModel,Trained on Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_wiki_300d,WordEmbeddingsModel,Trained on Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_scielowiki_50d,WordEmbeddingsModel,Trained on Scielo Articles + Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_scielowiki_150d,WordEmbeddingsModel,Trained on Scielo Articles + Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
embeddings_scielowiki_300d,WordEmbeddingsModel,Trained on Scielo Articles + Clinical Wikipedia Articles,,https://zenodo.org/record/3744326#.XtViinVKh_U
ner_bionlp,NerDLModel,Trained on Cancer Genetics (CG) task of the BioNLP Shared Task 2013 with `embeddings_clinical`,"Amino_acid, Anatomical_system, Cancer, Cell, Cellular_component, Developing_anatomical_Structure, Gene_or_gene_product, Immaterial_anatomical_entity, Multi-tissue_structure, Organ, Organism, Organism_subdivision, Simple_chemical, Tissue.",http://2013.bionlp-st.org/tasks/cancer-genetics
ner_clinical,NerDLModel,"Trained on 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text with `embeddings_clinical`.","Problem, Test, Treatment.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp
ner_diseases,NerDLModel,Trained on i2b2 with `embeddings_clinical.,Disease,
ner_drugs,NerDLModel,Trained on i2b2_med7 + FDA with `embeddings_clinical`.,DrugChem (Drug and Chemicals),https://www.i2b2.org/NLP/Medication
ner_healthcare,NerDLModel,"Trained on 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text with `embeddings_healthcare`.","Problem, Test, Treatment.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
ner_posology,NerDLModel,Trained on the 2018 i2b2 dataset and FDA Drug datasets with `embeddings_clinical`.,"Dosage, Drug, Duration, Form,  Frequency, Route, Strength.",https://open.fda.gov/
pos_clinical,PerceptronModel,Trained with MedPost dataset,,
spellcheck_clinical,ContextSpellCheckerModel,Trained with PubMed and i2b2 datasets,,
textmatch_cpt_token,TextMatcherModel,"Trai,ned on NER Synonym Augmented Procedural Terminology bigram tokens combined up to a window of one",,
textmatch_icdo_ner,TextMatcherModel,Trained on NER Synonym Augmented ICD Histology Behaviour bigram tokens up to a window of four,,
ner_cellular,NerDLModel,Trained on the JNLPBA corpus containing more than 2.404 publication abstracts with `embeddings_clinical`,"DNA, Cell_type, Cell_line, RNA, Protein.",http://www.geniaproject.org/
ner_anatomy,NerDLModel,Trained on the Anatomical Entity Mention (AnEM) corpus with `embeddings_clinical`,"Anatomical_system, Cell, Cellular_component, Developing_anatomical_structure, Immaterial_anatomical_entity, Multi-tissue_structure, Organ, Organism_subdivision, Organism_substance, Pathological_formation, Tissue.",http://www.nactem.ac.uk/anatomy/
ner_deid_enriched,NerDLModel,Trained on JSL enriched n2c2 2014: De-identification and Heart Disease Risk Factors Challenge datasets with `embeddings_clinical`,"Age, City, Country, Date, Doctor, Hospital, Idnum, Medicalrecord, Organization, Patient, Phone, Profession, State, Street, Username, Zip.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-2014/
ner_deid_large,NerDLModel,Trained on plain n2c2 2014: De-identification and Heart Disease Risk Factors Challenge datasets with `embeddings_clinical`,"Age, Contact, Date, Id, Location, Name, Profession.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-2014/
ner_jsl,NerDLModel,Trained on data gathered andmanually annotated by John Snow Labs,"Age, Diagnosis, Dosage, Drug_name, Frequency, Gender, Lab_name, Lab_result, Modifier, Name, Negation, Symptom_name",https://www.johnsnowlabs.com/data/
ner_jsl_enriched,NerDLModel,Trained on data gathered and manually annotated by John Snow Labs,"Age, Diagnosis, Dosage, Drug_name, Frequency, Gender, Lab_name, Lab_result, Modifier, Name, Negation, Symptom_name",https://www.johnsnowlabs.com/data/
ner_posology_large,NerDLModel,Trained on the 2018 i2b2 dataset and FDA Drug datasets with `embeddings_clinical`.,"Dosage, Drug, Duration, Form,  Frequency, Route, Strength.",https://open.fda.gov/
ner_posology_small,NerDLModel,Trained on the 2018 i2b2 dataset (no FDA) with `embeddings_clinical`.,"Dosage, Drug, Duration, Form,  Frequency, Route, Strength.",https://www.i2b2.org/NLP/Medication
ner_risk_factors,NerDLModel,Trained on plain n2c2 2014: De-identification and Heart Disease Risk Factors Challenge datasets with `embeddings_clinical`,"Cad, Diabetes, Family_hist, Hyperlipidemia, Hypertension, Medication, Obese, Phi, Smoker.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-2014/
chunkresolve_icd10cm_neoplasms_clinical,ChunkEntityResolverModel,"Trained on ICD10CM Dataset Ranges: C000-D489, R590-R599",ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/C00-D49
chunkresolve_icd10cm_puerile_clinical,ChunkEntityResolverModel,Trained on ICD10CM Dataset Range: O0000-O9989,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/O00-O9A
chunkresolve_icd10cm_diseases_clinical,ChunkEntityResolverModel,Trained on ICD10CM Dataset Range: A000-N989 Except Neoplasms and Musculoskeletal,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/
chunkresolve_icd10cm_injuries_clinical,ChunkEntityResolverModel,Trained on ICD10CM Dataset Range: S0000XA-S98929S ,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/S00-T88
chunkresolve_icd10cm_musculoskeletal_clinical,ChunkEntityResolverModel,Trained on ICD10CM Dataset Range: M0000-M9979XXS,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/M00-M99
chunkresolve_icd10cm_poisoning_ext_clinical,ChunkEntityResolverModel,Trained on ICD10CM Dataset Range: T1500XA-T879,ICD10-CM Codes and their normalized definition,https://www.icd10data.com/ICD10CM/Codes/S00-T88
ner_events_clinical,NerDLModel,Trained on i2b2 events data with `clinical_embeddings`,"Problem, Test, Treatment, Occurence, Clinical_Dept, Date, Evidential, Duration, Frequency, Admission, Discharge, Time",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
ner_clinical_large,NerDLModel,Trained on i2b2 augmented data with `clinical_embeddings`,"Problem, Test, Treatment",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
chunkresolve_loinc_clinical,ChunkEntityResolverModel,Trained on LOINC dataset with `embeddings_clinical`,LOINC Codes and ther Standard Name,https://loinc.org/
deidentify_large,DeIdentificatoinModel,"Trained on 10.000 Contact, Location, Name and Profession random replacements","Contact, Location, Name, Profession.",https://portal.dbmi.hms.harvard.edu/projects/n2c2-2014/
ner_medmentions_coarse,NerDLModel,Trained on MedMentions dataset,,
chunkresolve_snomed_findings_clinical,ChunkEntityResolverModel,Trained on SNOMED CT Findings,Snomed Codes and their normalized definition,http://www.snomed.org/
ner_diag_proc,NerDLModel,Trained on CodiEsp Challenge dataset,"Diagnostico, Procedimiento",https://temu.bsc.es/codiesp/
ner_neoplasms,NerDLModel,Trained on MedMentions dataset,MalignantNeoplasm,https://temu.bsc.es/cantemist/
chunkresolve_rxnorm_cd_clinical,ChunkEntityResolverModel,Trained on December 2019 RxNorm Clinical Drugs (TTY=CD) ontology graph with `embeddings_clinical`,RxNorm Codes and their normalized definition,https://www.nlm.nih.gov/pubs/techbull/nd19/brief/nd19_rxnorm_december_2019_release.html
chunkresolve_rxnorm_scd_clinical,ChunkEntityResolverModel,Trained on December 2019 RxNorm Clinical Drugs (TTY=SCD) ontology graph with `embeddings_clinical`,RxNorm Codes and their normalized definition,https://www.nlm.nih.gov/pubs/techbull/nd19/brief/nd19_rxnorm_december_2019_release.html
chunkresolve_rxnorm_sbd_clinical,ChunkEntityResolverModel,Trained on December 2019 RxNorm Clinical Drugs (TTY=SBD) ontology graph with `embeddings_clinical`,RxNorm Codes and their normalized definition,https://www.nlm.nih.gov/pubs/techbull/nd19/brief/nd19_rxnorm_december_2019_release.html
re_clinical,RelationExtractionModel,Trained on i2b2 augmented data with `clinical_embeddings`,"TrIP (improved), TrWP (worsened), TrCP (caused problem), TrAP (administered), TrNAP (avoided), TeRP (revealed problem), TeCP (investigate problem), PIP (problems related)",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
re_temporal_events_clinical,RelationExtractionModel,Trained on i2b2 augmented data with `clinical_embeddings`,"TrIP (improved), TrWP (worsened), TrCP (caused problem), TrAP (administered), TrNAP (avoided), TeRP (revealed problem), TeCP (investigate problem), PIP (problems related)",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
re_temporal_events_enriched_clinical,RelationExtractionModel,Trained on i2b2 augmented data with `clinical_embeddings`,"Extracts: Temporal relations (BEFORE, AFTER, SIMULTANEOUS, BEGUN_BY, ENDED_BY, DURING, BEFORE_OVERLAP) between clinical events (`ner_events_clinical`)",https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/


Date_Collected,Date_Processed,Processor,Farm,Sample_Location,Replicate,Time,Sample_ID,Subsample_ID,Size_Class,Subsample,Nematode,Annelid,Clam,HSC_egg,Gastropod,Copepod,Ostracod,Foraminifera,Empty_oyster,Single_clam_valve,Empty_gastropod,Empty_ostracod,Exoskeleton,Isopod,Amphipod,Unknown Star Organism,Unknown,Notes_during_Collection,Notes_during_Processing
6/2/20,11/11/20,Elizabeth,B,Control,1,11:57,Farm B Control 1,B-Control1-2mm,2,1,0,0,1,0,1,0,0,0,0,1,0,0,0,0,0,0,0,,1 full clam valve
6/2/20,11/11/20,Elizabeth,B,Control,1,11:57,Farm B Control 1,B-Control1-1mm,1,1,7,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,,3 whole clam valves
6/2/20,11/11/20,Elizabeth,B,Control,1,11:57,Farm B Control 1,B-Control1-0.5mm,0.5,1,16,2,4,0,0,0,0,0,0,3,2,0,0,0,0,0,0,,"4*4 nematodes; 3 single clam valve; one of the clams is full but gaping and it contains tissues. I think both empty gastropod shells in 0.5mm are the same species. For first shell, see pictures: FarmB_Control1_0.5mm_gastropodshell, FarmB_Control1_0.5mm_gastropodshell1. Second picture taken with above light source. For second shell, see FarmB_Control1_0.5mm_gastropodshell2"
6/2/20,11/12/20,Elizabeth,B,Control,2,12:00,Farm B Control 2,B-Control2-2mm,2,1,0,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,"1 full clam valve; 1 bivalve that looks like a razor mussel and there is tissue inside. See images: FarmB_Control2_2mm_bivalveseam, FarmB_Control2_2mm_bivalvetissue"
6/2/20,11/12/20,Elizabeth,B,Control,2,12:00,Farm B Control 2,B-Control2-1mm,1,1,17,0,1,0,0,0,0,0,0,2,0,0,0,0,0,0,0,,2 full clam valves
6/2/20,11/12/20,Elizabeth,B,Control,2,12:00,Farm B Control 2,B-Control2-0.5mm,0.5,1,48,4,1,0,0,0,1,0,0,7,1,0,0,0,0,0,0,,12*4 nematodes; 7 full single clam valves. Empty gastropod: FarmB_Control2_0.5mm_gastropodshell
6/2/20,11/12/20,Elizabeth,B,Control,3,12:00,Farm B Control 3,B-Control3-2mm,2,1,1,0,0,0,3,0,0,0,0,1,0,0,0,0,0,0,0,,Gastropods are eastern mud snail; 1 single clam shell
6/2/20,11/12/20,Elizabeth,B,Control,3,12:00,Farm B Control 3,B-Control3-1mm,1,1,20,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,,The empty gastropod shell is the same type as the one from FarmB_Alley2_1mm_gastropod; 2 single clam valves
6/2/20,11/12/20,Elizabeth,B,Control,3,12:00,Farm B Control 3,B-Control3-0.5mm,0.5,1,48,0,1,0,0,0,1,0,0,3,3,0,0,0,0,0,0,,12*4 nematodes; empty gastropod is an eastern mud snail; 3 single clam valves
6/2/20,11/9/20,Elizabeth,B,Alley,1,11:47,Farm B Alley 1,B-Alley1-2mm,2,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,11/9/20,Elizabeth,B,Alley,1,11:47,Farm B Alley 1,B-Alley1-1mm,1,1,7,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,11/9/20,Elizabeth,B,Alley,1,11:47,Farm B Alley 1,B-Alley1-0.5mm,0.5,1,52,5,0,0,0,0,1,0,0,2,1,0,0,0,0,0,0,, 13*4 nematodes; 2 single clam valves. image of fecal pellets: FarmB_Alley1_0.5mm_mystery
6/2/20,11/11/20,Elizabeth,B,Alley,2,11:50,Farm B Alley 2,B-Alley2-2mm,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,3 pieces of empty tubes but no worms
6/2/20,11/11/20,Elizabeth,B,Alley,2,11:50,Farm B Alley 2,B-Alley2-1mm,1,1,10,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,,not an organism but really cool spikey thing (FarmB_Alley2_1mm_cool). empty gastropod pic is FarmB_Alley2_1mm_gastropod
6/2/20,11/11/20,Elizabeth,B,Alley,2,11:50,Farm B Alley 2,B-Alley2-0.5mm,0.5,1,32,10,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,,8*4 nematodes;
6/2/20,11/12/20,Elizabeth,B,Alley,3,11:50,Farm B Alley 3,B-Alley3-2mm,2,1,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,,gastropods are eastern mud snail
6/2/20,11/12/20,Elizabeth,B,Alley,3,11:50,Farm B Alley 3,B-Alley3-1mm,1,1,12,1,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,,2 single clam valve
6/2/20,11/12/20,Elizabeth,B,Alley,3,11:50,Farm B Alley 3,B-Alley3-0.5mm,0.5,1,40,3,0,0,0,0,1,0,0,2,0,0,0,0,1,0,0,,10*4 nematodes; 2 single clam valves; mystery shrimpy organism: FarmB_Alley3_0.5mm_mystery. Dave says mystery organism is amphipod.
6/2/20,11/12/20,Elizabeth,B,Rack,1,11:50,Farm B Rack 1,B-Rack1-2mm,2,1,0,0,1,0,3,0,0,0,0,1,0,0,0,0,0,0,0,,Gastropods are eastern mud snails; one bivalve that has no tissues but valves are still attached: FarmB_UnderRack_2mm_bivalve
6/2/20,11/12/20,Elizabeth,B,Rack,1,11:50,Farm B Rack 1,B-Rack1-1mm,1,1,10,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,,2 single clam valves
6/2/20,11/12/20,Elizabeth,B,Rack,1,11:50,Farm B Rack 1,B-Rack1-0.5mm,0.5,1,48,2,3,0,0,0,0,0,0,1,2,0,0,0,0,0,0,,12*4 nematodes; 1 single clam valve; one empty gastropod shell is an eastern mud snail and the other empty gastropod is the same shell as species from FarmB_Alley2_1mm_gastropod
6/2/20,11/11/20,Elizabeth,B,Rack,2,11:53,Farm B Rack 2,B-Rack2-2mm,2,1,1,0,0,0,3,0,0,0,0,1,1,0,0,0,0,0,0,,One gastropod is giant! Part of it is above water so it was difficult to get a high quality image: FarmB_UnderRack_2mm_gastropod2. Is is most definitely an eastern mud snail. All snails are same species. 1 full clam valve. Many long tubes but do not appear to have worm inside (dark tube).
6/2/20,11/11/20,Elizabeth,B,Rack,2,11:53,Farm B Rack 2,B-Rack2-1mm,1,1,19,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,,
6/2/20,11/11/20,Elizabeth,B,Rack,2,11:53,Farm B Rack 2,B-Rack2-0.5mm,0.5,1,56,4,1,0,0,0,0,0,0,0,3,0,0,0,0,0,0,,14*4 nematodes;
6/2/20,11/11/20,Elizabeth,B,Rack,3,11:56,Farm B Rack 3,B-Rack3-2mm,2,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,,"BIG polychaete. picture of 2mm ""whelk"":  FarmB_UnderRack_2mm_gastropod, FarmB_UnderRack_2mm_gastropod1; Dave says it doesn't look quite like boonea impressa, might be mud snail (ilyanassa obsoleta)"
6/2/20,11/11/20,Elizabeth,B,Rack,3,11:56,Farm B Rack 3,B-Rack3-1mm,1,1,9,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,11/11/20,Elizabeth,B,Rack,3,11:56,Farm B Rack 3,B-Rack3-0.5mm,0.5,1,40,8,1,0,0,0,1,0,0,0,1,0,0,0,0,0,0,,10*4 nematodes; gastropod shell appears to be same species as earlier today
6/2/20,1/27/21,Elizabeth,A,Control,1,12:08,Farm A Control 1,A-Control1-2mm,2,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,1/27/21,Elizabeth,A,Control,1,12:08,Farm A Control 1,A-Control1-1mm,1,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,
6/2/20,1/27/21,Elizabeth,A,Control,1,12:08,Farm A Control 1,A-Control1-0.5mm,0.5,1,NA,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,1/25/21,Elizabeth,A,Control,2,12:10,Farm A Control 2,A-Control2-2mm,2,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Pebbles.
6/2/20,1/25/21,Elizabeth,A,Control,2,12:10,Farm A Control 2,A-Control2-1mm,1,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,Nematodes present.
6/2/20,1/25/21,Elizabeth,A,Control,2,12:10,Farm A Control 2,A-Control2-0.5mm,0.5,1,NA,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Nematodes present.
6/2/20,1/18/21,Elizabeth,A,Control,3,12:09,Farm A Control 3,A-Control3-2mm,2,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,There was one single full (unbroken but not attached to second valve) clam valve.
6/2/20,1/18/21,Elizabeth,A,Control,3,12:09,Farm A Control 3,A-Control3-1mm,1,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Some nematodes
6/2/20,1/18/21,Elizabeth,A,Control,3,12:09,Farm A Control 3,A-Control3-0.5mm,0.5,1,NA,3,0,0,0,1,0,0,0,1,0,0,0,0,0,0,2,,"Nematodes present. One unknown organism looks kind of like an ant - See images: FarmA_Control3_0.5mm_unknown, FarmA_Control3_0.5mm_unknownbottom, FarmA_Control3_0.5mm_unknowntop, FarmA_Control3_0.5mm_unknowntop2. Looks somewhat similar to isopod we've seen from Doris genus, but this organism is more narrow than the Doris images we've captured. SEcond unknown organism is different organism. See images: FarmA_Control3_0.5mm_unknown2, FarmA_Control3_0.5mm_unknown2.1. Picutre of copepod is: FarmA_Control3_0.5mm_copepod. Back half of copepod is missing. The copepod looks like Plankton from Spongebob Squarepants."
6/2/20,1/18/21,Elizabeth,A,Alley,1,12:56,Farm A Alley 1,A-Alley1-2mm,2,1,NA,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,Muddy; mud snails; still wet sediment,
6/2/20,1/18/21,Elizabeth,A,Alley,1,12:56,Farm A Alley 1,A-Alley1-1mm,1,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,Muddy; mud snails; still wet sediment,
6/2/20,1/18/21,Elizabeth,A,Alley,1,12:56,Farm A Alley 1,A-Alley1-0.5mm,0.5,1,NA,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,Muddy; mud snails; still wet sediment,Clam is the most common type we've been seeing
6/2/20,1/27/21,Elizabeth,A,Alley,2,11:58,Farm A Alley 2,A-Alley2-2mm,2,1,NA,2,0,0,2,0,0,0,0,1,0,0,0,0,0,0,0,,Single_clam_valve is a single oyster valve. Gastropod is the large snail species we've been seeing.
6/2/20,1/27/21,Elizabeth,A,Alley,2,11:58,Farm A Alley 2,A-Alley2-1mm,1,1,NA,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,
6/2/20,1/27/21,Elizabeth,A,Alley,2,11:58,Farm A Alley 2,A-Alley2-0.5mm,0.5,1,NA,3,1,0,0,0,0,0,0,1,2,0,0,0,0,0,0,,
6/2/20,1/20/21,Elizabeth,A,Alley,3,12:00,Farm A Alley 3,A-Alley3-2mm,2,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,One single clam valve: FarmA_Alley3_2mm_valve. One tubeworm tube but no evidence of worm inside.
6/2/20,1/20/21,Elizabeth,A,Alley,3,12:00,Farm A Alley 3,A-Alley3-1mm,1,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,Valve is the most common species we've been finding. Nematodes present.
6/2/20,1/20/21,Elizabeth,A,Alley,3,12:00,Farm A Alley 3,A-Alley3-0.5mm,0.5,1,NA,14,0,0,0,0,0,0,0,6,0,0,0,0,0,0,0,,Two single valves are the most common species we see in samples. 
6/2/20,1/18/21,Elizabeth,A,Rack,1,12:03,Farm A Rack 1,A-Rack1-2mm,2,1,NA,0,1,0,1,0,0,0,0,1,1,0,0,0,0,0,0,,"Empty gastropod is slipper shell - might be empty common slipper shell (Crepidula fornicata) - Farm A_Rack1_2mm_unknownshell, Farm A_Rack1_2mm_unknownshellbottom. Does this count as an animal for our analysis? Single clam valve might be little surf clam (mulinia lateralis), or northern quahog (merceneria merceneria). It is one of the common clams in these samples - Farm A_Rack1_2mm_singlevalve. Clam looks similar to coquina clam (Donax variabilis), but unsure what it is - FarmA_Rack1_2mm_clam1. Clam still contains flesh and both valves are still connected and intact. Gastropod contains tissues and is one of the species common to these samples - FarmA_Rack1_2mm_gastropod. Many empty worm tubes."
6/2/20,1/18/21,Elizabeth,A,Rack,1,12:03,Farm A Rack 1,A-Rack1-1mm,1,1,NA,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,,Single clam valve species is same as that found in 2mm. Nematodes present.
6/2/20,1/18/21,Elizabeth,A,Rack,1,12:03,Farm A Rack 1,A-Rack1-0.5mm,0.5,1,NA,4,0,0,0,0,0,0,0,1,4,0,0,0,0,0,0,,Empty gastropod shell is one of the common types we've seen in these samples - FarmA_Rack1_0.5mm_gastropod. Could it be Melampus bidentatus?
6/2/20,1/22/21,Elizabeth,A,Rack,2,12:06,Farm A Rack 2,A-Rack2-2mm,2,1,NA,2,0,0,4,0,0,0,0,2,0,0,0,0,0,0,0,,Picture of first worm is: FarmA_Rack2_2mm_worm. Picture of second worm is: FarmA_Rack2_2mm_worm2. Tubeworm tubes present. Picture of two single clam valves: FarmA_Rack2_2mm_valves. Note tha valves are different sizes so likely different individuals. Snails all appear to be same species. Three snails are about 2cm (too large to take image). Image of smaller snail: FarmA_Rack2_2mm_snail.
6/2/20,1/22/21,Elizabeth,A,Rack,2,12:06,Farm A Rack 2,A-Rack2-1mm,1,1,NA,2,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,,Picture of two worms: FarmA_Rack2_1mm_worms.
6/2/20,1/22/21,Elizabeth,A,Rack,2,12:06,Farm A Rack 2,A-Rack2-0.5mm,0.5,1,NA,9,0,0,0,0,0,0,0,5,2,0,0,0,0,0,0,,"Picture of empty snail shell is: FarmA_Rack2_0.5mm_snail. Pictures of second empty snail are: FarmA_Rack2_0.5mm_snail2, FarmA_Rack2_0.5mm_snail3."
6/2/20,1/27/21,Elizabeth,A,Rack,3,12:13,Farm A Rack 3,A-Rack3-2mm,2,1,NA,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,,Snail is the common large species we have seen
6/2/20,1/27/21,Elizabeth,A,Rack,3,12:13,Farm A Rack 3,A-Rack3-1mm,1,1,NA,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0,,Snail is the common large species we have seen. Clam is most common species we see.
6/2/20,1/27/21,Elizabeth,A,Rack,3,12:13,Farm A Rack 3,A-Rack3-0.5mm,0.5,1,NA,18,1,0,0,0,0,0,0,6,4,0,0,0,0,0,0,,
6/2/20,1/29/21,Elizabeth,C,Control,1,12:05,Farm C Control 1,C-Control1-2mm,2,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Empty tube worm tubes: One very long one (~3cm) and several other fragmented tubes
6/2/20,1/29/21,Elizabeth,C,Control,1,12:05,Farm C Control 1,C-Control1-1mm,1,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,1/29/21,Elizabeth,C,Control,1,12:05,Farm C Control 1,C-Control1-0.5mm,0.5,1,NA,3,1,0,0,1,1,0,0,4,2,0,0,0,0,0,0,,"I think it's a copepod but doublecheck picture and ask for help: FarmC_Control1_0.5mm_amphipod1, FarmC_Control1_0.5mm_amphipod2"
6/2/20,1/27/21,Elizabeth,C,Control,2,12:10,Farm C Control 2,C-Control2-2mm,2,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,1/27/21,Elizabeth,C,Control,2,12:10,Farm C Control 2,C-Control2-1mm,1,1,NA,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,,Clam valves are both the small species that we commonly see.
6/2/20,1/27/21,Elizabeth,C,Control,2,12:10,Farm C Control 2,C-Control2-0.5mm,0.5,1,NA,1,1,0,0,0,2,0,0,2,0,0,0,0,0,0,0,,Clams and single valves were the small specie we've been commonly seeing.
6/2/20,1/22/21,Elizabeth,C,Control,3,12:10,Farm C Control 3,C-Control3-2mm,2,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,Picture of clam valve is: FarmC_Control3_2mm_valve. One tube from a tubeworm: FarmC_Control3_2mm_tube.
6/2/20,1/22/21,Elizabeth,C,Control,3,12:10,Farm C Control 3,C-Control3-1mm,1,1,NA,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Picture of clam is: FarmC_Control3_1mm_clam.
6/2/20,1/22/21,Elizabeth,C,Control,3,12:10,Farm C Control 3,C-Control3-0.5mm,0.5,1,NA,2,0,0,0,0,1,0,0,1,0,0,0,0,0,0,0,,
6/2/20,1/20/21,Elizabeth,C,Alley,1,12:20,Farm C Alley 1,C-Alley1-2mm,2,1,NA,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,Narrow,"Listed slipper shell as an empty gastropod: FarmC_Alley1_2mm_unknown1, FarmC_Alley1_2mm_unknown2. There is a tubeworm tube that is about 2cm long."
6/2/20,1/20/21,Elizabeth,C,Alley,1,12:20,Farm C Alley 1,C-Alley1-1mm,1,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,Narrow,
6/2/20,1/20/21,Elizabeth,C,Alley,1,12:20,Farm C Alley 1,C-Alley1-0.5mm,0.5,1,NA,2,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,Narrow,"Excluded unkown organism that might be part of a worm: FarmC_Alley1_0.5mm_unknown1. Image of annelid is FarmC_Alley1_0.5mm_worm. Two of the single clam valves appear to be same species: FarmC_Alley1_0.5mm_valve1, FarmC_Alley1_0.5mm_valve2"
6/2/20,1/25/21,Elizabeth,C,Alley,2,12:14,Farm C Alley 2,C-Alley2-2mm,2,1,NA,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,,"Two of the single clam valves are the species we commonly see and one of the valves looks like a razor clam: FarmC_Alley2_2mm_clams, FarmC_Alley2_2mm_clams2. Maybe razor clam is Little Green Razor Clam or Common Razor Clam."
6/2/20,1/25/21,Elizabeth,C,Alley,2,12:14,Farm C Alley 2,C-Alley2-1mm,1,1,NA,0,0,0,0,0,0,0,0,2,1,0,0,0,0,0,0,,"Single clam valve is the common species that we've been seeing. Gastropod is one of the common ones we have seen: FarmC_Alley2_1mm_snail, FarmC_Alley2_1mm_snail2."
6/2/20,1/25/21,Elizabeth,C,Alley,2,12:14,Farm C Alley 2,C-Alley2-0.5mm,0.5,1,NA,2,1,0,0,0,0,0,0,5,1,0,0,0,0,0,0,,"Clam is the small common type of clam that we've been seeing. Gastropod is: FarmC_Alley2_0.5mm_snail, FarmC_Alley2_0.5mm_snail2"
6/2/20,1/25/21,Elizabeth,C,Alley,3,12:17,Farm C Alley 3,C-Alley3-2mm,2,1,NA,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,,Snail is the large species that we commonly see. Single clam valve is the small clam species that we commonly see. 
6/2/20,1/25/21,Elizabeth,C,Alley,3,12:17,Farm C Alley 3,C-Alley3-1mm,1,1,NA,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,Razor clam is transparent: FarmC_Alley3_1mm_razor
6/2/20,1/25/21,Elizabeth,C,Alley,3,12:17,Farm C Alley 3,C-Alley3-0.5mm,0.5,1,NA,2,0,0,0,0,0,0,0,3,0,0,0,0,0,0,0,,Worms are typical species we've been seeing. Clam valves are from typical species we've seen.
6/2/20,1/18/21,Elizabeth,C,Rack,1,12:06,Farm C Rack 1,C-Rack1-2mm,2,1,NA,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,,Both gastropods are the species we have seen most often. I took a picture of the smaller gastropod: FarmC_Rack1_2mm_gastropod
6/2/20,1/18/21,Elizabeth,C,Rack,1,12:06,Farm C Rack 1,C-Rack1-1mm,1,1,NA,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,
6/2/20,1/18/21,Elizabeth,C,Rack,1,12:06,Farm C Rack 1,C-Rack1-0.5mm,0.5,1,NA,1,0,0,0,0,2,0,0,1,0,0,0,0,0,0,0,,
6/2/20,1/25/21,Elizabeth,C,Rack,2,12:09,Farm C Rack 2,C-Rack2-2mm,2,1,NA,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,,Single clam valve: FarmC_Rack2_2mm_valve1. Gastropod is dark bron and has beaded/pimpled surface texture: FarmC_Rack2_2mm_snail; FarmC_Rack2_2mm_snail2. Empty tubeworm tubes are present.
6/2/20,1/25/21,Elizabeth,C,Rack,2,12:09,Farm C Rack 2,C-Rack2-1mm,1,1,NA,0,1,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,Nematodes present. Single clam valve is same species as intact clam. Intact (both valves) clam is: FarmC_Rack2_1mm_clam2.
6/2/20,1/25/21,Elizabeth,C,Rack,2,12:09,Farm C Rack 2,C-Rack2-0.5mm,0.5,1,NA,2,1,0,1,0,0,0,0,2,1,0,0,0,0,0,0,,"Clam is same species as those in 1mm size class. Listed slipper shell as empty gastropod: FarmC_Rack2_0.5mm_slipper1, FarmC_Rack2_0.5mm_slipper2."
6/2/20,1/20/21,Elizabeth,C,Rack,3,12:12,Farm C Rack 3,C-Rack3-2mm,2,1,NA,0,0,0,1,0,0,0,0,2,0,0,0,0,0,0,0,,Tubeworm tube in sample is about 1cm long. Image of bivalve shells is FarmC_Rack2_2mm_bivalve. Gastropod species is one we've seen in other samples; see image FarmC_Rack2_2mm_gastropod.
6/2/20,1/20/21,Elizabeth,C,Rack,3,12:12,Farm C Rack 3,C-Rack3-1mm,1,1,NA,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,,"Nematodes present. Single clam valve is the species we see commonly, and image is FarmC_Rack2_1mm_clam"
6/2/20,1/20/21,Elizabeth,C,Rack,3,12:12,Farm C Rack 3,C-Rack3-0.5mm,0.5,1,NA,1,0,0,0,0,1,0,0,0,3,0,0,0,0,0,0,,One empty gastropod is same species we've seen in other samples - FarmC_Rack2_0.5mm_gastropod. Second empty gastropod is another species - FarmC_Rack2_0.5mm_gastrpod2. Third gastropod image is FarmC_Rack2_0.5mm_gastropod3. Worm image is FarmC_Rack2_0.5mm_worm. Ostracod image is FarmC_Rack2_0.5mm_ostracod. Nematodes present.

SN.,size of cluster,cluster member,merge reason,first match count,second match count
0,76,"['able', 'leader', 'ability', 'skills', 'capable', 'intelligence', 'smart', 'leadership', 'wise', 'knowledgeable', 'diplomacy', 'good', 'basic', 'kindness', 'well', 'morality', 'honest', 'honesty', 'integrity', 'unity', 'whole', 'knowledge', 'compassion', 'achievement', 'situations', 'office', 'president', 'negotiator', 'time', 'term', 'experience', 'serve', 'qualified', 'character', 'qualities', 'logical', 'fulfilled', 'different', 'empathy', 'empathize', 'understanding', 'sense', 'u', 'motives', 'think', 'political', 'politics', 'sociology', 'ideas', 'deliberate', 'problem', 'nice', 'polite', 'course', 'run', 'working', 'making', 'constitution', 'goals', 'work', 'care', 'caring', 'solving', 'determination', 'management', 'decisions', 'decisiveness', 'compromise', 'teamwork', 'selfless', 'prejudice', 'prejudices', 'dedication', 'promises', 'dedicated', 'commitment']","[((Synset('ability.n.02'), 'possession of the qualities (especially mental qualities) required to do something or get something done'), (Synset('cognition.n.01'), 'the psychological result of perception and learning and reasoning'))]","(15, (0, 'leadership', 17, 29))","(0, None)"
1,7,"['ethic', 'systems', 'relations', 'groups', 'people', 'country', 'county']","[((Synset('forgivingness.n.01'), 'tendency to be kind and forgiving'), (Synset('compassion.n.02'), 'the humane quality of understanding the suffering of others and wanting to do something about it'))]","(3, (2, 'relate to diverse groups', 8, 17))","(0, None)"
2,5,"['friendly', 'approachable', 'willingness', 'calm', 'agreeable']","[((Synset('kindness.n.03'), 'a kind act'), (Synset('accomplishment.n.01'), 'the action of accomplishing something'))]","(4, (1, 'diplomacy', 18, 22))","(1, (0, 'leadership', 17, 29))"
3,2,"['trustworthy', 'trustworthiness']","[((Synset('intelligence.n.02'), 'a unit responsible for gathering and interpreting information about an enemy'), (Synset('agency.n.01'), 'an administrative unit of government'))]","(2, (6, 'honesty', 7, 10))","(0, None)"
4,2,"['common', 'lot']","[((Synset('president_of_the_united_states.n.01'), 'the person who holds the office of head of state of the United States government'), (Synset('negotiator.n.01'), 'someone who negotiates (confers with others in order to reach a settlement)'))]","(1, (5, 'intelligence/knowledge', 9, 12))","(0, None)"
5,2,"['sure', 'confident']","[((Synset('presidency.n.01'), 'the tenure of a president'), (Synset('term.n.02'), 'a limited period of time'))]","(1, (8, 'confident', 3, 3))","(0, None)"
6,2,"['strong', 'hard']","[((Synset('ability.n.01'), 'the quality of being able to perform; a quality that permits or facilitates achievement or accomplishment'), (Synset('quality.n.01'), 'an essential and distinguishing attribute of something or someone'))]","(1, (0, 'leadership', 17, 29))","(0, None)"
7,2,"['humility', 'humble']","[((Synset('quality.n.01'), 'an essential and distinguishing attribute of something or someone'), (Synset('logicality.n.01'), 'correct and valid reasoning'))]","(2, (9, 'humble', 2, 2))","(0, None)"
8,1,['long'],"[((Synset('suffice.v.01'), 'be sufficient; be adequate, either in quality or quantity'), (Synset('satisfy.v.01'), 'meet the requirements or expectations of'))]","(1, (0, 'leadership', 17, 29))","(0, None)"
9,1,['proud'],"[((Synset('quality.n.01'), 'an essential and distinguishing attribute of something or someone'), (Synset('difference.n.01'), 'the quality of being unlike or dissimilar'))]","(1, (8, 'confident', 3, 3))","(0, None)"
10,1,['mature'],"[((Synset('compassion.n.01'), ""a deep awareness of and sympathy for another's suffering""), (Synset('empathy.n.01'), ""understanding and entering into another's feelings""))]","(1, (0, 'leadership', 17, 29))","(0, None)"
11,1,['eloquent'],"[((Synset('understanding.n.01'), 'the cognitive condition of someone who understands'), (Synset('sense.n.05'), 'a natural appreciation or ability'))]","(1, (1, 'diplomacy', 18, 22))","(0, None)"
12,1,['appeals'],"[((Synset('character.n.08'), 'a written symbol that is used to represent speech'), (Synset('u.n.03'), 'the 21st letter of the Roman alphabet'))]","(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
13,1,['idiot'],"[((Synset('ethical_motive.n.01'), 'motivation based on ideas of right and wrong'), (Synset('motivation.n.01'), 'the psychological feature that arouses an organism to action toward a desired goal; the reason for the action; that which gives purpose and direction to behavior'))]","(1, (5, 'intelligence/knowledge', 9, 12))","(0, None)"
14,1,['born'],"[((Synset('situation.n.03'), 'a complex or critical or unusual difficulty'), (Synset('problem.n.01'), 'a state of difficulty that needs to be resolved'))]","(0, None)","(0, None)"
15,1,['vast'],"[((Synset('kindness.n.03'), 'a kind act'), (Synset('politeness.n.02'), 'the act of showing regard for others'))]","(1, (5, 'intelligence/knowledge', 9, 12))","(0, None)"
16,1,['preferably'],"[((Synset('feel_for.v.01'), 'share the suffering of'), (Synset('care.v.01'), 'feel concern or interest'))]","(0, None)","(0, None)"
17,1,['genuine'],"[((Synset('settle.v.03'), 'settle conclusively; come to terms'), (Synset('compromise.v.02'), 'settle by concession'))]","(1, (1, 'diplomacy', 18, 22))","(0, None)"
18,1,['exceptionally'],"[((Synset('compromise.n.01'), 'a middle way between two extremes'), (Synset('teamwork.n.01'), 'cooperative work done by a team (especially when it is effective)'))]","(1, (5, 'intelligence/knowledge', 9, 12))","(0, None)"
19,1,['progressive'],"[((Synset('compromise.n.01'), 'a middle way between two extremes'), (Synset('selflessness.n.02'), 'acting with less concern for yourself than for the success of the joint activity'))]","(0, None)","(0, None)"
20,1,['oriented'],"[((Synset('influence.v.01'), 'have and exert influence or effect'), (Synset('prejudice.v.02'), ""influence (somebody's) opinion in advance""))]","(1, (0, 'leadership', 17, 29))","(0, None)"
21,1,['others'],"[((Synset('compromise.n.01'), 'a middle way between two extremes'), (Synset('commitment.n.02'), 'the act of binding yourself (intellectually or emotionally) to a course of action'))]","(1, (1, 'diplomacy', 18, 22))","(0, None)"
22,1,['level-headed'],"[((Synset('friendliness.n.02'), 'a friendly disposition'), (Synset('willingness.n.01'), 'cheerful compliance'))]","(1, (0, 'leadership', 17, 29))","(0, None)"
23,1,['international'],"[((Synset('friendliness.n.02'), 'a friendly disposition'), (Synset('composure.n.01'), 'steadiness of mind under stress'))]","(1, (3, 'political skills ', 9, 16))","(0, None)"
24,1,["i'm"],"[((Synset('friendliness.n.02'), 'a friendly disposition'), (Synset('agreeableness.n.02'), 'a temperamental disposition to be agreeable'))]","(0, None)","(0, None)"
25,1,['together'],"[((Synset('park.n.02'), 'a piece of open land for recreational use in an urban area'), (Synset('lot.n.02'), 'a parcel of land having fixed boundaries'))]","(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
26,1,['sophisticated'],"[((Synset('ethic.n.01'), 'the principles of right and wrong that are accepted by an individual or a social group'), (Synset('relation_back.n.01'), '(law) the principle that an act done at a later time is deemed by law to have occurred at an earlier time'))]","(1, (0, 'leadership', 17, 29))","(0, None)"
27,1,['inclusivity'],"[((Synset('system.n.02'), 'a group of independent but interrelated elements comprising a unified whole'), (Synset('group.n.01'), 'any number of entities (members) considered as a unit'))]","(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
28,1,['join'],"[((Synset('group.n.01'), 'any number of entities (members) considered as a unit'), (Synset('people.n.01'), '(plural) any group of human beings (men or women or children) collectively'))]","(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
29,1,['controlling'],"[((Synset('people.n.01'), '(plural) any group of human beings (men or women or children) collectively'), (Synset('nation.n.02'), 'the people who live in a nation or country'))]","(1, (0, 'leadership', 17, 29))","(0, None)"
30,1,['passion'],"[((Synset('country.n.02'), 'the territory occupied by a nation'), (Synset('county.n.02'), '(United States) the largest administrative district within a state'))]","(1, (4, 'determination', 8, 13))","(0, None)"
31,1,['umm'],NA,"(0, None)","(0, None)"
32,1,['bravery'],NA,"(1, (8, 'confident', 3, 3))","(0, None)"
33,1,['someone'],NA,"(0, None)","(0, None)"
34,1,['crucial'],NA,"(1, (0, 'leadership', 17, 29))","(0, None)"
35,1,['underprivileged'],NA,"(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
36,1,['stressful'],NA,"(1, (0, 'leadership', 17, 29))","(0, None)"
37,1,['levelheadedness'],NA,"(1, (0, 'leadership', 17, 29))","(0, None)"
38,1,['peaceful'],NA,"(1, (0, 'leadership', 17, 29))","(0, None)"
39,1,['ulterior'],NA,"(1, (6, 'honesty', 7, 10))","(0, None)"
40,1,['equality'],NA,"(1, (2, 'relate to diverse groups', 8, 17))","(0, None)"
41,1,['politically'],NA,"(1, (3, 'political skills ', 9, 16))","(0, None)"


collection_id,collection_label,member_id,part_label
g000,unspecified organism group,p0000,unspecified part
g000,unspecified organism group,p0001,entire organism
g001,woody angiosperms,p0000,unspecified part
g001,woody angiosperms,p0001,entire organism
g001,woody angiosperms,p0002,bark
g001,woody angiosperms,p0003,twig
g001,woody angiosperms,p0005,leaf
g001,woody angiosperms,p0007,inflorescence
g001,woody angiosperms,p0008,fruit
g001,woody angiosperms,p0009,seed
g001,woody angiosperms,p0012,flower
g002,herbaceous angiosperms,p0000,unspecified part
g002,herbaceous angiosperms,p0001,entire organism
g002,herbaceous angiosperms,p0004,stem
g002,herbaceous angiosperms,p0005,leaf
g002,herbaceous angiosperms,p0007,inflorescence
g002,herbaceous angiosperms,p0008,fruit
g002,herbaceous angiosperms,p0009,seed
g002,herbaceous angiosperms,p0012,flower
g003,gymnosperms,p0000,unspecified part
g003,gymnosperms,p0001,entire organism
g003,gymnosperms,p0002,bark
g003,gymnosperms,p0003,twig
g003,gymnosperms,p0005,leaf
g003,gymnosperms,p0006,cone
g003,gymnosperms,p0009,seed
g003,gymnosperms,p0010,male cone
g003,gymnosperms,p0011,female cone
g007,fishes,p0001,entire organism
g007,fishes,p0000,unspecified part
g007,fishes,p0013,head
g007,fishes,p0027,skull
g007,fishes,p0030,fin
g009,mammals,p0001,entire organism
g009,mammals,p0000,unspecified part
g009,mammals,p0013,head
g009,mammals,p0028,cranium
g009,mammals,p0029,mandible
g009,mammals,p0027,skull
g010,birds,p0001,entire organism
g010,birds,p0000,unspecified part
g010,birds,p0013,head
g010,birds,p0028,cranium
g010,birds,p0029,mandible
g010,birds,p0027,skull
g010,birds,p0017,wing
g010,birds,p0031,egg
g011,reptiles/amphibians,p0001,entire organism
g011,reptiles/amphibians,p0000,unspecified part
g011,reptiles/amphibians,p0013,head
g011,reptiles/amphibians,p0028,cranium
g011,reptiles/amphibians,p0029,mandible
g011,reptiles/amphibians,p0027,skull
g011,reptiles/amphibians,p0026,genitalia
g008,grasses,p0000,unspecified part
g008,grasses,p0001,entire organism
g012,insects,p0000,unspecified part
g012,insects,p0001,entire organism
g012,insects,p0013,head
g012,insects,p0014,thorax
g012,insects,p0015,abdomen
g012,insects,p0016,leg
g012,insects,p0017,wing
g012,insects,p0018,antenna
g012,insects,p0019,forewing
g012,insects,p0020,hindwing
g012,insects,p0021,foreleg
g012,insects,p0022,midleg
g012,insects,p0023,hindleg
g012,insects,p0024,eye
g012,insects,p0026,genitalia
p0000,unspecified morphological feature,r0000,unspecified orientation
p0001,entire organism,r0000,unspecified orientation
p0001,entire organism,r0001,anterior side
p0001,entire organism,r0002,posterior side
p0001,entire organism,r0003,lateral side
p0001,entire organism,r0004,right side
p0001,entire organism,r0005,left side
p0001,entire organism,r0006,dorsal side
p0001,entire organism,r0007,ventral side
p0013,head,r0000,unspecified orientation
p0013,head,r0001,anterior side
p0013,head,r0003,lateral side
p0013,head,r0004,right side
p0013,head,r0005,left side
p0013,head,r0006,dorsal side
p0013,head,r0007,ventral side
p0014,thorax,r0000,unspecified orientation
p0014,thorax,r0003,lateral side
p0014,thorax,r0004,right side
p0014,thorax,r0005,left side
p0014,thorax,r0006,dorsal side
p0014,thorax,r0007,ventral side
p0015,abdomen,r0000,unspecified orientation
p0015,abdomen,r0002,posterior side
p0015,abdomen,r0003,lateral side
p0015,abdomen,r0004,right side
p0015,abdomen,r0005,left side
p0015,abdomen,r0006,dorsal side
p0015,abdomen,r0007,ventral side
p0016,leg,r0003,lateral side
p0017,wing,r0000,unspecified orientation
p0017,wing,r0006,dorsal side
p0017,wing,r0007,ventral side
p0018,antenna,r0003,lateral side
p0019,forewing,r0000,unspecified orientation
p0019,forewing,r0006,dorsal side
p0019,forewing,r0007,ventral side
p0020,hindwing,r0000,unspecified orientation
p0020,hindwing,r0006,dorsal side
p0020,hindwing,r0007,ventral side
p0021,foreleg,r0003,lateral side
p0022,midleg,r0003,lateral side
p0023,hindleg,r0003,lateral side
p0024,eye,r0003,lateral side
p0026,genitalia,r0000,unspecified orientation
p0026,genitalia,r0002,posterior side
p0026,genitalia,r0003,lateral side
p0026,genitalia,r0004,right side
p0026,genitalia,r0005,left side
p0026,genitalia,r0006,dorsal side
p0026,genitalia,r0007,ventral side
p0002,bark,r0003,lateral side
p0003,twig,r0003,lateral side
p0005,leaf,r0008,adaxial (top) side
p0005,leaf,r0009,abaxial (bottom) side
p0004,stem,r0003,lateral side
p0001,entire organism,r0010,apical side
p0007,inflorescence,r0003,lateral side
p0007,inflorescence,r0010,apical side
p0008,fruit,r0010,apical side
p0008,fruit,r0003,lateral side
p0001,entire organism,r0011,basal side
p0008,fruit,r0011,basal side
p0009,seed,r0003,lateral side
p0012,flower,r0010,apical (front) side
p0012,flower,r0003,lateral side
p0012,flower,r0011,basal (back) side
p0006,cone,r0010,apical (front) side
p0006,cone,r0003,lateral side
p0006,cone,r0011,basal (back) side
p0027,skull,r0006,dorsal side
p0027,skull,r0007,ventral side
p0027,skull,r0003,lateral side
p0028,cranium,r0006,dorsal side
p0028,cranium,r0007,ventral side
p0028,cranium,r0003,lateral side
p0029,mandible,r0006,dorsal side
p0029,mandible,r0007,ventral side
p0029,mandible,r0003,lateral side
p0030,fin,r0003,lateral side
p0031,egg,r0003,lateral side
p0010,male cone,r0010,apical (front) side
p0010,male cone,r0003,lateral side
p0010,male cone,r0011,basal (back) side
p0011,female cone,r0010,apical (front) side
p0011,female cone,r0003,lateral side
p0011,female cone,r0011,basal (back) side

Run,Assay Type,AvgSpotLen,Bases,BioProject,BioSample,Bytes,Center Name,Consent,DATASTORE filetype,DATASTORE provider,DATASTORE region,dev_stage,Experiment,Instrument,Library Name,LibraryLayout,LibrarySelection,LibrarySource,Organism,Platform,ReleaseDate,Sample Name,sample_name,sex,SRA Study,strain,host,bioproject_id,Description,sample_title,biotic_relationship,replicate
DRR029433,RNA-Seq,202,9740523628,PRJDB3457,SAMD00024932,6015442140,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",1st stage larvae,DRX026493,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019559,SvL1,mix,DRP002634,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis 1st stage larvae,S.venezuelensis_L1,,
DRR029434,RNA-Seq,202,6404337482,PRJDB3457,SAMD00024932,3791411031,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",1st stage larvae,DRX026494,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019559,SvL1,mix,DRP002634,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis 1st stage larvae,S.venezuelensis_L1,,
DRR029435,RNA-Seq,202,9992095438,PRJDB3457,SAMD00024935,6175532991,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",3st stage infective larvae,DRX026495,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019557,SviL3,female,DRP002632,HH1,,PRJDB3457,Strongyloides venezuelensis 3rd stage infective larvae,S.venezuelensis_iL3,,
DRR029436,RNA-Seq,202,4702786846,PRJDB3457,SAMD00024935,2744178187,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",3st stage infective larvae,DRX026496,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019557,SviL3,female,DRP002632,HH1,,PRJDB3457,Strongyloides venezuelensis 3rd stage infective larvae,S.venezuelensis_iL3,,
DRR029437,RNA-Seq,202,9144401832,PRJDB3457,SAMD00024933,5641673572,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",3st stage larvae in lung,DRX026497,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019599,SvL3lung,female,DRP002639,HH1,Mus musculus,PRJDB3457,Strongyloides venezuelensis 3rd stage larvae in lung,S.venezuelensis_L3lung,,
DRR029438,RNA-Seq,202,3711262978,PRJDB3457,SAMD00024933,2150951649,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",3st stage larvae in lung,DRX026498,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019599,SvL3lung,female,DRP002639,HH1,Mus musculus,PRJDB3457,Strongyloides venezuelensis 3rd stage larvae in lung,S.venezuelensis_L3lung,,
DRR029439,RNA-Seq,202,8747297102,PRJDB3457,SAMD00024934,5370153220,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",young adult female,DRX026499,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019561,SvYAF,female,DRP002636,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis young adult females,S.venezuelensis_YoungAdult,,
DRR029440,RNA-Seq,202,4784200724,PRJDB3457,SAMD00024934,2768158304,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",young adult female,DRX026500,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019561,SvYAF,female,DRP002636,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis young adult females,S.venezuelensis_YoungAdult,,
DRR029441,RNA-Seq,202,10883623246,PRJDB3457,SAMD00024930,6754221540,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",adult female,DRX026501,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019530,SvAF,female,DRP002629,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis adult females,S.venezuelensis_Adult,,
DRR029442,RNA-Seq,202,4484826624,PRJDB3457,SAMD00024930,2623093390,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",adult female,DRX026502,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019530,SvAF,female,DRP002629,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis adult females,S.venezuelensis_Adult,,
DRR029443,RNA-Seq,202,9484330664,PRJDB3457,SAMD00024936,5843368867,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",induced 3rd stage infective larvae 1day,DRX026503,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019562,SviL3_1d,female,DRP002637,HH1,,PRJDB3457,Strongyloides venezuelensis 3rd stage infective larvae induced invitro (1day),S.venezuelensis_iL3induced1day,,
DRR029444,RNA-Seq,202,7762833740,PRJDB3457,SAMD00024937,4792084214,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",induced 3rd stage infective larvae 5day,DRX026504,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019558,SviL3_5d,female,DRP002633,HH1,,PRJDB3457,Strongyloides venezuelensis 3rd stage infective larvae induced in vitoro (5day),S.venezuelensis_iL3induced5day,,
DRR029445,RNA-Seq,202,6026968354,PRJDB3457,SAMD00024931,3485957516,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",egg,DRX026505,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2015-05-01T00:00:00Z,DRS019560,SvEgg,mix,DRP002635,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis Eggs,S.venezuelensis_Egg,,
DRR029282,RNA-Seq,202,7639514760,PRJDB3457,SAMD00024931,4730590553,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",egg,DRX026342,Illumina HiSeq 2000,,PAIRED,RANDOM,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2016-05-08T00:00:00Z,DRS019560,SvEgg,mix,DRP002629,HH1,Rattus norvegicus,PRJDB3457,Strongyloides venezuelensis Eggs,S.venezuelensis_Egg,,
DRR106346,RNA-Seq,300,5422588800,PRJDB3457,SAMD00096905,3457258771,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099447,Illumina MiSeq,SvFFWTA1,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096905,N703_SvFFWTA1,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 1
DRR106347,RNA-Seq,300,5537360100,PRJDB3457,SAMD00096905,3493727295,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099447,Illumina MiSeq,SvFFWTA1,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096905,N703_SvFFWTA1,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 1
DRR106348,RNA-Seq,300,5591790300,PRJDB3457,SAMD00096906,3431321034,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099448,Illumina MiSeq,SvFFWTA2,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096906,N704_SvFFWTA2,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 2
DRR106349,RNA-Seq,300,5717313300,PRJDB3457,SAMD00096906,3463640394,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099448,Illumina MiSeq,SvFFWTA2,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096906,N704_SvFFWTA2,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 2
DRR106350,RNA-Seq,300,3915915900,PRJDB3457,SAMD00096907,2422579923,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099449,Illumina MiSeq,SvFFWTA3,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096907,N705_SvFFWTA3,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 3
DRR106351,RNA-Seq,300,4009223700,PRJDB3457,SAMD00096907,2449117284,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",free-living adult,DRX099449,Illumina MiSeq,SvFFWTA3,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096907,N705_SvFFWTA3,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 3
DRR106352,RNA-Seq,300,5360814900,PRJDB3457,SAMD00096908,3371355325,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099450,Illumina MiSeq,SvPFWTA1,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096908,N706_SvPFWTA1,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 1
DRR106353,RNA-Seq,300,5460815700,PRJDB3457,SAMD00096908,3394407218,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099450,Illumina MiSeq,SvPFWTA1,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096908,N706_SvPFWTA1,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 1
DRR106354,RNA-Seq,300,4443784200,PRJDB3457,SAMD00096909,2813562712,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099451,Illumina MiSeq,SvPFWTA2,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096909,N707_SvPFWTA2,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 2
DRR106355,RNA-Seq,300,4541997900,PRJDB3457,SAMD00096909,2842776067,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099451,Illumina MiSeq,SvPFWTA2,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096909,N707_SvPFWTA2,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 2
DRR106356,RNA-Seq,300,4735392300,PRJDB3457,SAMD00096910,3033850153,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099452,Illumina MiSeq,SvPFWTA3,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096910,N708_SvPFWTA3,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 3
DRR106357,RNA-Seq,300,4818647100,PRJDB3457,SAMD00096910,3053585186,MIYAZAKI,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",parasitic adult,DRX099452,Illumina MiSeq,SvPFWTA3,PAIRED,cDNA,TRANSCRIPTOMIC,Strongyloides venezuelensis,ILLUMINA,2019-09-26T00:00:00Z,SAMD00096910,N708_SvPFWTA3,female,DRP002629,HH1,Rattus norvegicus,,,,parasite,biological replicate 3

"PatientID","CultureID","culture_relative_age","organism"
"0491",782,0,"Staphylococcus aureus (MSSA)"
"0541",893,583,"Staphylococcus aureus (MRSA)"
"0541",895,505,"Staphylococcus aureus (MSSA)"
"0541",895,505,"Stenotrophomonas maltophilia complex"
"0541",895,505,"Haemophilus influenzae"
"0558",944,0,"Staphylococcus aureus (MSSA)"
"0558",944,0,"Pseudomonas aeruginosa"
"0561",958,691,"Staphylococcus aureus (MRSA)"
"0561",959,619,"Staphylococcus aureus (MRSA)"
"0543",4516,644,"Pseudomonas aeruginosa"
"0543",4516,644,"Pseudomonas aeruginosa"
"0543",4516,644,"Staphylococcus aureus (MSSA)"
"0362",4762,161,"Staphylococcus aureus (MSSA)"
"0561",4850,477,"Staphylococcus aureus (MRSA)"
"0543",4900,553,"Pseudomonas aeruginosa"
"0543",4900,553,"Staphylococcus aureus (MSSA)"
"0543",4900,553,"Pseudomonas aeruginosa"
"0541",4967,324,"Staphylococcus aureus (MRSA)"
"0541",4967,324,"Stenotrophomonas maltophilia complex"
"0362",5056,98,"Staphylococcus aureus (MRSA)"
"0543",5108,511,"Pseudomonas aeruginosa"
"0543",5108,511,"Pseudomonas aeruginosa"
"0543",5108,511,"Staphylococcus aureus (MSSA)"
"0541",5146,288,"Aspergillus fumigatus"
"0541",5146,288,"Staphylococcus aureus (MRSA)"
"0541",5146,288,"Staphylococcus aureus (MRSA)"
"0541",5317,254,"Aspergillus fumigatus"
"0541",5317,254,"Staphylococcus aureus (MRSA)"
"0541",5575,206,"enteric gram negative rod"
"0541",5575,206,"Staphylococcus aureus (MRSA)"
"0541",5575,206,"Stenotrophomonas maltophilia complex"
"0362",5583,0,"Staphylococcus aureus (MSSA)"
"0543",5625,413,"Staphylococcus aureus (MSSA)"
"0561",5698,315,"Staphylococcus aureus (MRSA)"
"0543",5791,384,"Pseudomonas aeruginosa"
"0543",5791,384,"Pseudomonas aeruginosa"
"0561",5864,286,"Staphylococcus aureus (MRSA)"
"0541",5971,138,"Aspergillus fumigatus"
"0541",5971,138,"Staphylococcus aureus (MSSA)"
"0561",5991,256,"Staphylococcus aureus (MRSA)"
"0543",6312,286,"Pseudomonas aeruginosa"
"0543",6312,286,"Pseudomonas aeruginosa"
"0543",6312,286,"Staphylococcus aureus (MSSA)"
"0541",6421,51,"Aspergillus fumigatus"
"0541",6421,51,"enteric gram negative rod"
"0541",6421,51,"Staphylococcus aureus (MRSA)"
"0561",6456,176,"Staphylococcus aureus (MRSA)"
"0561",6646,142,"Staphylococcus aureus (MRSA)"
"0541",6721,0,"Staphylococcus aureus (MSSA)"
"0543",6810,195,"Pseudomonas aeruginosa"
"0543",6810,195,"Pseudomonas aeruginosa"
"0543",6810,195,"Staphylococcus aureus (MSSA)"
"0561",6967,81,"Achromobacter species"
"0561",6967,81,"enteric gram negative rod"
"0561",6967,81,"Staphylococcus aureus (MRSA)"
"0561",7164,43,"Staphylococcus aureus (MRSA)"
"0561",7352,7,"Staphylococcus aureus (MRSA)"
"0561",7388,0,"Aspergillus fumigatus"
"0561",7388,0,"Staphylococcus aureus (MRSA)"
"0543",7400,84,"Pseudomonas aeruginosa"
"0543",7400,84,"Pseudomonas aeruginosa"
"0543",7400,84,"Staphylococcus aureus (MSSA)"
"0543",7587,42,"Pseudomonas aeruginosa"
"0543",7587,42,"Pseudomonas aeruginosa"
"0543",7587,42,"Staphylococcus aureus (MSSA)"
"0543",7837,0,"Pseudomonas aeruginosa"
"0543",7837,0,"Staphylococcus aureus (MSSA)"
"0076",11143,455,"Achromobacter xylosoxidans"
"0076",11144,414,"Achromobacter xylosoxidans"
"0076",11145,379,"Achromobacter xylosoxidans"
"0076",11146,279,"Achromobacter xylosoxidans"
"0076",11147,188,"Achromobacter xylosoxidans"
"0076",11148,72,"Achromobacter xylosoxidans"
"0076",11149,0,"Achromobacter xylosoxidans"
"0244",11262,545,"Achromobacter xylosoxidans"
"0076",11328,678,"Achromobacter xylosoxidans"
"0076",11329,617,"Achromobacter xylosoxidans"
"0076",11330,566,"Achromobacter xylosoxidans"
"0076",11331,527,"Achromobacter xylosoxidans"
"0244",11572,475,"Achromobacter xylosoxidans"
"0324",11765,373,"Achromobacter xylosoxidans"
"0324",11766,70,"Achromobacter xylosoxidans"
"0324",11767,0,"Achromobacter xylosoxidans"
"0367",11798,714,"Achromobacter xylosoxidans"
"0367",11799,671,"Achromobacter xylosoxidans"
"0487",11817,432,"Achromobacter xylosoxidans"
"0487",11818,398,"Achromobacter xylosoxidans"
"0487",11819,377,"Achromobacter xylosoxidans"
"0487",11820,357,"Achromobacter xylosoxidans"
"0487",11821,286,"Achromobacter xylosoxidans"
"0487",11822,238,"Achromobacter xylosoxidans"
"0487",11823,191,"Achromobacter xylosoxidans"
"0487",11824,161,"Achromobacter xylosoxidans"
"0487",11825,147,"Achromobacter xylosoxidans"
"0487",11826,105,"Achromobacter xylosoxidans"
"0487",11827,77,"Achromobacter xylosoxidans"
"0487",11828,56,"Achromobacter xylosoxidans"
"0487",11829,52,"Achromobacter xylosoxidans"
"0487",11830,27,"Achromobacter xylosoxidans"
"0487",11831,3,"Achromobacter xylosoxidans"
"0117",11945,679,"Alcaligenes species"
"0117",11946,385,"Alcaligenes species"
"0117",11946,385,"Aspergillus fumigatus"
"0117",11986,294,"Aspergillus fumigatus"
"0310",12128,305,"Aspergillus fumigatus"
"0310",12129,214,"Aspergillus fumigatus"
"0310",12130,109,"Aspergillus fumigatus"
"0310",12131,0,"Aspergillus fumigatus"
"0204",12153,293,"Aspergillus fumigatus"
"0204",12154,161,"Aspergillus fumigatus"
"0229",12254,441,"Aspergillus fumigatus"
"0244",11262,545,"Aspergillus fumigatus"
"0244",12387,493,"Aspergillus fumigatus"
"0244",11572,475,"Aspergillus fumigatus"
"0244",12388,353,"Aspergillus fumigatus"
"0244",12389,294,"Aspergillus fumigatus"
"0336",12570,318,"Aspergillus fumigatus"
"0336",12571,0,"Aspergillus fumigatus"
"0160",12593,623,"Aspergillus fumigatus"
"0233",12626,641,"Aspergillus fumigatus"
"0233",12627,551,"Aspergillus fumigatus"
"0233",12628,480,"Aspergillus fumigatus"
"0233",12629,295,"Aspergillus fumigatus"
"0328",12641,725,"Aspergillus fumigatus"
"0328",12642,217,"Aspergillus fumigatus"
"0320",12653,258,"Aspergillus fumigatus"
"0320",12654,237,"Aspergillus fumigatus"
"0320",12655,209,"Aspergillus fumigatus"
"0320",12656,90,"Aspergillus fumigatus"
"0320",12657,0,"Aspergillus fumigatus"
"0324",12669,691,"Aspergillus fumigatus"
"0324",12670,420,"Aspergillus fumigatus"
"0324",11767,0,"Aspergillus fumigatus"
"0324",12671,-22,"Aspergillus fumigatus"
"0328",12743,73,"Aspergillus fumigatus"
"0233",12750,97,"Aspergillus fumigatus"
"0199",12763,27,"Aspergillus fumigatus"
"0132",12787,728,"Aspergillus species"
"0229",12850,242,"Aspergillus species"
"0229",12851,46,"Aspergillus species"
"0172",12859,1,"Aspergillus species"
"0172",12860,0,"Aspergillus species"
"0244",12873,659,"Aspergillus species"
"0244",12874,185,"Aspergillus species"
"0336",12943,503,"Aspergillus species"
"0233",12959,389,"Aspergillus species"
"0233",12960,259,"Aspergillus species"
"0324",12979,707,"Aspergillus species"
"0324",12980,154,"Aspergillus species"
"0324",12981,151,"Aspergillus species"
"0199",13006,334,"Aspergillus species"
"0233",13009,134,"Aspergillus species"
"0199",13024,40,"Aspergillus species"
"0199",13025,0,"Aspergillus species"
"0244",13042,714,"Aspergillus terreus"
"0244",12387,493,"Burkholderia cepacia complex"
"0244",13199,451,"Burkholderia cepacia complex"
"0244",12388,353,"Burkholderia cepacia complex"
"0244",12389,294,"Burkholderia cepacia complex"
"0244",13200,252,"Burkholderia cepacia complex"
"0244",13201,218,"Burkholderia cepacia complex"
"0244",12874,185,"Burkholderia cepacia complex"
"0244",13202,153,"Burkholderia cepacia complex"
"0244",13203,70,"Burkholderia cepacia complex"
"0244",13204,43,"Burkholderia cepacia complex"
"0244",13466,224,"Burkholderia cepacia complex"
"0558",13814,539,"Enteric gram negative rods"
"0558",13815,385,"Enteric gram negative rods"
"0244",12874,185,"Enteric gram negative rods"
"0172",12859,1,"Enteric gram negative rods"
"0208",13945,322,"Enteric gram negative rods"
"0208",13946,251,"Enteric gram negative rods"
"0233",12628,480,"Enteric gram negative rods"
"0320",12657,0,"Enteric gram negative rods"
"0324",11767,0,"Enteric gram negative rods"
"0367",13961,97,"Enteric gram negative rods"
"0558",13968,287,"Enteric gram negative rods"
"0172",14101,612,"Hemophilus influenzae"
"0172",14102,588,"Hemophilus influenzae"
"0172",14103,300,"Hemophilus influenzae"
"0172",14104,220,"Hemophilus influenzae"
"0172",12859,1,"Hemophilus influenzae"
"0172",12860,0,"Hemophilus influenzae"
"0491",14326,643,"Hemophilus influenzae"
"0491",14327,412,"Hemophilus influenzae"
"0491",14328,407,"Hemophilus influenzae"
"0336",14341,671,"Hemophilus influenzae"
"0160",14342,644,"Hemophilus influenzae"
"0558",13814,539,"Hemophilus influenzae"
"0558",14370,471,"Hemophilus influenzae"
"0324",14382,527,"Hemophilus influenzae"
"0324",11766,70,"Hemophilus influenzae"
"0328",12743,73,"Hemophilus influenzae"
"0132",14493,637,"Mycelia sterilia"
"0132",14494,546,"Mycelia sterilia"
"0132",14495,406,"Mycelia sterilia"
"0132",14496,351,"Mycelia sterilia"
"0132",14497,301,"Mycelia sterilia"
"0132",14498,280,"Mycelia sterilia"
"0132",14499,203,"Mycelia sterilia"
"0132",14500,105,"Mycelia sterilia"
"0132",14501,0,"Mycelia sterilia"
"0229",14502,0,"Mycelia sterilia"
"0117",14522,202,"Nonfermenting gram negative rod"
"0199",13024,40,"Oral flora"
"0117",11986,294,"Pandoraea apista/pulmonicola"
"0117",14580,0,"Pandoraea pnomenusa"
"0244",13042,714,"Pandoraea sputorum"
"0244",12873,659,"Pandoraea sputorum"
"0244",14585,605,"Pandoraea sputorum"
"0244",11262,545,"Pandoraea sputorum"
"0244",11572,475,"Pandoraea sputorum"
"0244",13466,224,"Pandoraea sputorum"
"0244",14586,0,"Pandoraea sputorum"
"0244",14586,0,"Pandoraea sputorum"
"0199",14599,349,"Penicillium species"
"0076",11328,678,"Probable pseudomonas mendocina"
"0132",14495,406,"Pse domonas aeruginosa 3, cf"
"0117",11945,679,"Pseudomonas aeruginosa"
"0117",11946,385,"Pseudomonas aeruginosa"
"0117",11986,294,"Pseudomonas aeruginosa"
"0117",14522,202,"Pseudomonas aeruginosa"
"0117",14580,0,"Pseudomonas aeruginosa"
"0132",12787,728,"Pseudomonas aeruginosa"
"0132",14493,637,"Pseudomonas aeruginosa"
"0132",14494,546,"Pseudomonas aeruginosa"
"0132",14495,406,"Pseudomonas aeruginosa"
"0132",14496,351,"Pseudomonas aeruginosa"
"0132",14497,301,"Pseudomonas aeruginosa"
"0132",14498,280,"Pseudomonas aeruginosa"
"0132",14499,203,"Pseudomonas aeruginosa"
"0132",14500,105,"Pseudomonas aeruginosa"
"0132",14501,0,"Pseudomonas aeruginosa"
"0076",11143,455,"Pseudomonas aeruginosa"
"0076",11144,414,"Pseudomonas aeruginosa"
"0076",11145,379,"Pseudomonas aeruginosa"
"0076",11146,279,"Pseudomonas aeruginosa"
"0076",11147,188,"Pseudomonas aeruginosa"
"0076",11148,72,"Pseudomonas aeruginosa"
"0076",11149,0,"Pseudomonas aeruginosa"
"0310",14945,725,"Pseudomonas aeruginosa"
"0310",14946,627,"Pseudomonas aeruginosa"
"0310",14947,497,"Pseudomonas aeruginosa"
"0310",14948,403,"Pseudomonas aeruginosa"
"0310",12128,305,"Pseudomonas aeruginosa"
"0310",12129,214,"Pseudomonas aeruginosa"
"0310",12130,109,"Pseudomonas aeruginosa"
"0310",12131,0,"Pseudomonas aeruginosa"
"0204",12153,293,"Pseudomonas aeruginosa"
"0204",15058,0,"Pseudomonas aeruginosa"
"0229",15142,643,"Pseudomonas aeruginosa"
"0229",15143,559,"Pseudomonas aeruginosa"
"0229",15144,483,"Pseudomonas aeruginosa"
"0229",12254,441,"Pseudomonas aeruginosa"
"0229",12850,242,"Pseudomonas aeruginosa"
"0229",15145,130,"Pseudomonas aeruginosa"
"0229",12851,46,"Pseudomonas aeruginosa"
"0229",14502,0,"Pseudomonas aeruginosa"
"0244",13042,714,"Pseudomonas aeruginosa"
"0244",15752,667,"Pseudomonas aeruginosa"
"0244",12873,659,"Pseudomonas aeruginosa"
"0244",15753,644,"Pseudomonas aeruginosa"
"0244",14585,605,"Pseudomonas aeruginosa"
"0244",11262,545,"Pseudomonas aeruginosa"
"0244",12387,493,"Pseudomonas aeruginosa"
"0244",13199,451,"Pseudomonas aeruginosa"
"0244",15754,403,"Pseudomonas aeruginosa"
"0244",12388,353,"Pseudomonas aeruginosa"
"0244",12389,294,"Pseudomonas aeruginosa"
"0244",13200,252,"Pseudomonas aeruginosa"
"0244",13201,218,"Pseudomonas aeruginosa"
"0244",12874,185,"Pseudomonas aeruginosa"
"0244",13202,153,"Pseudomonas aeruginosa"
"0244",13203,70,"Pseudomonas aeruginosa"
"0244",13204,43,"Pseudomonas aeruginosa"
"0244",14586,0,"Pseudomonas aeruginosa"
"0076",11328,678,"Pseudomonas aeruginosa"
"0076",11329,617,"Pseudomonas aeruginosa"
"0076",11330,566,"Pseudomonas aeruginosa"
"0076",11331,527,"Pseudomonas aeruginosa"
"0336",12571,0,"Pseudomonas aeruginosa"
"0160",16738,714,"Pseudomonas aeruginosa"
"0160",14342,644,"Pseudomonas aeruginosa"
"0160",12593,623,"Pseudomonas aeruginosa"
"0160",16739,532,"Pseudomonas aeruginosa"
"0160",16740,427,"Pseudomonas aeruginosa"
"0160",16741,329,"Pseudomonas aeruginosa"
"0160",16742,231,"Pseudomonas aeruginosa"
"0160",16743,127,"Pseudomonas aeruginosa"
"0160",16744,98,"Pseudomonas aeruginosa"
"0160",16745,0,"Pseudomonas aeruginosa"
"0199",17282,506,"Pseudomonas aeruginosa"
"0199",17283,454,"Pseudomonas aeruginosa"
"0558",17357,126,"Pseudomonas aeruginosa"
"0199",12763,27,"Pseudomonas aeruginosa"
"0199",13025,0,"Pseudomonas aeruginosa"
"0172",17559,436,"Pseudomonas aeruginosa"
"0172",17560,399,"Pseudomonas aeruginosa"
"0172",17561,317,"Pseudomonas aeruginosa"
"0172",17561,317,"Pseudomonas aeruginosa"
"0172",14103,300,"Pseudomonas aeruginosa"
"0172",17562,280,"Pseudomonas aeruginosa"
"0172",14104,220,"Pseudomonas aeruginosa"
"0336",14341,671,"Pseudomonas aeruginosa"
"0336",17906,601,"Pseudomonas aeruginosa"
"0336",12570,318,"Pseudomonas aeruginosa"
"0336",17907,160,"Pseudomonas aeruginosa"
"0336",17908,104,"Pseudomonas aeruginosa"
"0336",17909,41,"Pseudomonas aeruginosa"
"0336",12571,0,"Pseudomonas aeruginosa"
"0336",12571,0,"Pseudomonas aeruginosa"
"0208",13945,322,"Pseudomonas aeruginosa"
"0208",13946,251,"Pseudomonas aeruginosa"
"0208",17933,0,"Pseudomonas aeruginosa"
"0233",12626,641,"Pseudomonas aeruginosa"
"0233",17938,557,"Pseudomonas aeruginosa"
"0233",12627,551,"Pseudomonas aeruginosa"
"0233",12628,480,"Pseudomonas aeruginosa"
"0233",12959,389,"Pseudomonas aeruginosa"
"0233",12629,295,"Pseudomonas aeruginosa"
"0233",12960,259,"Pseudomonas aeruginosa"
"0328",17949,427,"Pseudomonas aeruginosa"
"0328",17950,422,"Pseudomonas aeruginosa"
"0320",12657,0,"Pseudomonas aeruginosa"
"0487",11818,398,"Pseudomonas aeruginosa"
"0487",11819,377,"Pseudomonas aeruginosa"
"0487",11821,286,"Pseudomonas aeruginosa"
"0487",11822,238,"Pseudomonas aeruginosa"
"0487",11823,191,"Pseudomonas aeruginosa"
"0487",11824,161,"Pseudomonas aeruginosa"
"0487",11825,147,"Pseudomonas aeruginosa"
"0487",11827,77,"Pseudomonas aeruginosa"
"0487",11828,56,"Pseudomonas aeruginosa"
"0487",11829,52,"Pseudomonas aeruginosa"
"0487",11831,3,"Pseudomonas aeruginosa"
"0199",18020,699,"Pseudomonas aeruginosa"
"0199",18021,594,"Pseudomonas aeruginosa"
"0199",18022,386,"Pseudomonas aeruginosa"
"0199",13006,334,"Pseudomonas aeruginosa"
"0233",13009,134,"Pseudomonas aeruginosa"
"0199",18030,188,"Pseudomonas aeruginosa"
"0233",12750,97,"Pseudomonas aeruginosa"
"0233",12959,389,"Pseudomonas fluorescens"
"0199",14599,349,"Rhizopus species"
"0320",12654,237,"Scedosporium apiospermum"
"0320",12655,209,"Scedosporium apiospermum"
"0199",13025,0,"Scedosporium apiospermum"
"0132",14493,637,"Staphylococcus"
"0132",14496,351,"Staphylococcus"
"0132",14500,105,"Staphylococcus"
"0310",14945,725,"Staphylococcus"
"0310",12128,305,"Staphylococcus"
"0310",12131,0,"Staphylococcus"
"0204",15058,0,"Staphylococcus"
"0244",13042,714,"Staphylococcus aureus (MRSA)"
"0336",12571,0,"Staphylococcus"
"0160",16741,329,"Staphylococcus"
"0160",16743,127,"Staphylococcus"
"0160",16744,98,"Staphylococcus"
"0204",18089,266,"Staphylococcus"
"0172",18112,689,"Staphylococcus"
"0172",17559,436,"Staphylococcus"
"0172",17561,317,"Staphylococcus"
"0491",14326,643,"Staphylococcus"
"0491",18225,587,"Staphylococcus"
"0491",18226,496,"Staphylococcus"
"0491",14327,412,"Staphylococcus"
"0491",14328,407,"Staphylococcus"
"0336",17906,601,"Staphylococcus"
"0336",12943,503,"Staphylococcus"
"0336",12570,318,"Staphylococcus"
"0336",17907,160,"Staphylococcus"
"0336",17908,104,"Staphylococcus"
"0336",17909,41,"Staphylococcus"
"0336",12571,0,"Staphylococcus"
"0558",18270,729,"Staphylococcus"
"0558",13814,539,"Staphylococcus"
"0558",14370,471,"Staphylococcus"
"0558",13815,385,"Staphylococcus"
"0328",12641,725,"Staphylococcus"
"0328",18277,693,"Staphylococcus"
"0328",18278,602,"Staphylococcus"
"0328",17949,427,"Staphylococcus"
"0328",17950,422,"Staphylococcus"
"0328",18279,357,"Staphylococcus"
"0328",18280,324,"Staphylococcus"
"0328",18281,262,"Staphylococcus"
"0328",18282,240,"Staphylococcus"
"0324",12980,154,"Staphylococcus"
"0324",12981,151,"Staphylococcus"
"0324",11766,70,"Staphylococcus"
"0324",11767,0,"Staphylococcus"
"0324",12671,-22,"Staphylococcus"
"0367",18317,265,"Staphylococcus"
"0487",11820,357,"Staphylococcus"
"0487",11821,286,"Staphylococcus"
"0487",11822,238,"Staphylococcus"
"0328",12743,73,"Staphylococcus aureus"
"0558",18346,233,"Staphylococcus aureus"
"0491",18348,237,"Staphylococcus aureus"
"0558",17357,126,"Staphylococcus aureus"
"0491",18356,132,"Staphylococcus aureus"
"0160",18362,714,"Staphylococcus aureus"
"0233",13009,134,"Staphylococcus aureus (MRSA)"
"0233",12750,97,"Staphylococcus aureus (MRSA)"
"0491",18379,133,"Staphylococcus aureus (MRSA)"
"0117",11986,294,"Staphylococcus"
"0117",14522,202,"Staphylococcus"
"0229",15142,643,"Staphylococcus"
"0229",15143,559,"Staphylococcus"
"0229",12851,46,"Staphylococcus"
"0076",11328,678,"Staphylococcus"
"0076",11329,617,"Staphylococcus"
"0076",11330,566,"Staphylococcus"
"0160",14342,644,"Staphylococcus"
"0204",18440,315,"Staphylococcus"
"0204",12154,161,"Staphylococcus"
"0208",13945,322,"Staphylococcus"
"0208",13946,251,"Staphylococcus"
"0320",19084,272,"Staphylococcus"
"0320",12654,237,"Staphylococcus"
"0320",12655,209,"Staphylococcus"
"0320",12657,0,"Staphylococcus"
"0324",14382,527,"Staphylococcus"
"0324",12670,420,"Staphylococcus"
"0367",11799,671,"Staphylococcus"
"0367",19108,552,"Staphylococcus"
"0367",19109,454,"Staphylococcus"
"0558",13968,287,"Staphylococcus"
"0132",14494,546,"Staphylococcus aureus (MRSA)"
"0132",14499,203,"Staphylococcus aureus (MRSA)"
"0132",14501,0,"Staphylococcus aureus (MRSA)"
"0244",15752,667,"Staphylococcus aureus (MRSA)"
"0244",12873,659,"Staphylococcus aureus (MRSA)"
"0244",15753,644,"Staphylococcus aureus (MRSA)"
"0244",14585,605,"Staphylococcus aureus (MRSA)"
"0244",11262,545,"Staphylococcus aureus (MRSA)"
"0244",12387,493,"Staphylococcus aureus (MRSA)"
"0244",13199,451,"Staphylococcus aureus (MRSA)"
"0244",15754,403,"Staphylococcus aureus (MRSA)"
"0244",12388,353,"Staphylococcus aureus (MRSA)"
"0244",12389,294,"Staphylococcus aureus (MRSA)"
"0244",13200,252,"Staphylococcus aureus (MRSA)"
"0244",13201,218,"Staphylococcus aureus (MRSA)"
"0244",12874,185,"Staphylococcus aureus (MRSA)"
"0244",13202,153,"Staphylococcus aureus (MRSA)"
"0244",13203,70,"Staphylococcus aureus (MRSA)"
"0244",13204,43,"Staphylococcus aureus (MRSA)"
"0244",14586,0,"Staphylococcus aureus (MRSA)"
"0160",16738,714,"Staphylococcus aureus (MRSA)"
"0160",12593,623,"Staphylococcus aureus (MRSA)"
"0160",16739,532,"Staphylococcus aureus (MRSA)"
"0160",16740,427,"Staphylococcus aureus (MRSA)"
"0160",16742,231,"Staphylococcus aureus (MRSA)"
"0160",16745,0,"Staphylococcus aureus (MRSA)"
"0172",17560,399,"Staphylococcus aureus (MRSA)"
"0172",17561,317,"Staphylococcus aureus (MRSA)"
"0172",14103,300,"Staphylococcus aureus (MRSA)"
"0172",17562,280,"Staphylococcus aureus (MRSA)"
"0172",14104,220,"Staphylococcus aureus (MRSA)"
"0172",12859,1,"Staphylococcus aureus (MRSA)"
"0172",12860,0,"Staphylococcus aureus (MRSA)"
"0244",11572,475,"Staphylococcus aureus (MRSA)"
"0244",13466,224,"Staphylococcus aureus (MRSA)"
"0336",12571,0,"Staphylococcus aureus (MRSA)"
"0336",19354,-20,"Staphylococcus aureus (MRSA)"
"0233",12626,641,"Staphylococcus aureus (MRSA)"
"0233",17938,557,"Staphylococcus aureus (MRSA)"
"0233",12627,551,"Staphylococcus aureus (MRSA)"
"0233",12628,480,"Staphylococcus aureus (MRSA)"
"0233",12959,389,"Staphylococcus aureus (MRSA)"
"0233",12629,295,"Staphylococcus aureus (MRSA)"
"0233",12960,259,"Staphylococcus aureus (MRSA)"
"0320",12653,258,"Staphylococcus aureus (MRSA)"
"0324",11765,373,"Staphylococcus aureus"
"0324",19398,294,"Staphylococcus aureus (MRSA)"
"0367",11798,714,"Staphylococcus aureus (MRSA)"
"0367",19421,363,"Staphylococcus aureus (MRSA)"
"0367",19422,195,"Staphylococcus aureus (MRSA)"
"0367",13961,97,"Staphylococcus aureus (MRSA)"
"0367",19423,6,"Staphylococcus aureus (MRSA)"
"0367",19424,0,"Staphylococcus aureus (MRSA)"
"0367",19425,-15,"Staphylococcus aureus (MRSA)"
"0367",19426,-30,"Staphylococcus aureus (MRSA)"
"0487",11817,432,"Staphylococcus aureus (MRSA)"
"0487",11823,191,"Staphylococcus aureus (MRSA)"
"0487",11824,161,"Staphylococcus aureus (MRSA)"
"0487",11826,105,"Staphylococcus aureus (MRSA)"
"0487",11831,3,"Staphylococcus aureus (MRSA)"
"0244",11572,475,"Stenotrophomonas maltophilia"
"0172",12859,1,"Stenotrophomonas maltophilia complex"
"0208",13945,322,"Stenotrophomonas maltophilia complex"
"0208",13946,251,"Stenotrophomonas maltophilia complex"
"0208",17933,0,"Stenotrophomonas maltophilia complex"
"0233",12626,641,"Stenotrophomonas maltophilia complex"
"0558",13814,539,"Stenotrophomonas maltophilia complex"
"0328",12641,725,"Stenotrophomonas maltophilia complex"
"0328",18277,693,"Stenotrophomonas maltophilia complex"
"0328",18280,324,"Stenotrophomonas maltophilia complex"
"0328",18281,262,"Stenotrophomonas maltophilia complex"
"0328",12642,217,"Stenotrophomonas maltophilia complex"
"0324",12979,707,"Stenotrophomonas maltophilia complex"
"0324",12669,691,"Stenotrophomonas maltophilia complex"
"0324",14382,527,"Stenotrophomonas maltophilia complex"
"0324",12670,420,"Stenotrophomonas maltophilia complex"
"0324",11765,373,"Stenotrophomonas maltophilia complex"
"0324",19398,294,"Stenotrophomonas maltophilia complex"
"0324",11767,0,"Stenotrophomonas maltophilia complex"
"0324",12671,-22,"Stenotrophomonas maltophilia complex"


"","query","significant","p_value","term_size","query_size","intersection_size","precision","recall","term_id","source","term_name","effective_domain_size","source_order","parents","IC"
"1","antiquewhite4",TRUE,0.0107027778755038,168,95,8,0.0842105263157895,0.0476190476190476,"GO:0070507","GO:BP","regulation of microtubule cytoskeleton organization",15979,19174,"c(""GO:0000226"", ""GO:0032886"", ""GO:0051493"")",NA
"2","antiquewhite4",TRUE,0.0328688545468697,196,95,8,0.0842105263157895,0.0408163265306122,"GO:0032886","GO:BP","regulation of microtubule-based process",15979,9156,"c(""GO:0007017"", ""GO:0050794"")",NA
"3","antiquewhite4",TRUE,0.0214512687589629,9937,103,79,0.766990291262136,0.00795008553889504,"GO:0005737","GO:CC","cytoplasm",16963,402,"c(""GO:0005622"", ""GO:0110165"")",NA
"4","black",TRUE,0.0095846740818279,9588,211,148,0.701421800947867,0.01543596161869,"GO:0043231","GO:CC","intracellular membrane-bounded organelle",16963,2153,"c(""GO:0043227"", ""GO:0043229"")",NA
"5","black",TRUE,0.0108003330213634,12994,211,185,0.876777251184834,0.0142373403109127,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"6","black",TRUE,0.0373073765686741,11093,211,163,0.772511848341232,0.0146939511403588,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"7","black",TRUE,0.0495369390107976,12231,211,175,0.829383886255924,0.0143079061401357,"GO:0043226","GO:CC","organelle",16963,2148,"GO:0110165",NA
"8","blue",TRUE,0.0250678891495921,3,99,2,0.0202020202020202,0.666666666666667,"GO:0045120","GO:CC","pronucleus",16963,2457,"GO:0005634",NA
"9","blue",TRUE,0.0378314581776834,11572,93,82,0.881720430107527,0.00708606982371241,"GO:0005515","GO:MF","protein binding",16268,1897,"GO:0005488",NA
"10","brown",TRUE,0.0215993740728563,102,97,7,0.0721649484536082,0.0686274509803922,"KEGG:04064","KEGG","NF-kappa B signaling pathway",7747,234,"KEGG:00000",NA
"11","brown4",TRUE,0.0345817229376848,8,130,3,0.0230769230769231,0.375,"REAC:R-HSA-416550","REAC","Sema4D mediated inhibition of cell attachment and migration",10588,1930,"REAC:R-HSA-400685",NA
"12","coral1",TRUE,0.0440496515112906,6463,145,77,0.531034482758621,0.0119139718397029,"GO:0005634","GO:CC","nucleus",16963,310,"GO:0043231",NA
"13","darkgreen",TRUE,0.0122639940005792,12994,226,197,0.871681415929204,0.0151608434662152,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"14","darkgreen",TRUE,0.0198234366916543,9588,226,156,0.690265486725664,0.016270337922403,"GO:0043231","GO:CC","intracellular membrane-bounded organelle",16963,2153,"c(""GO:0043227"", ""GO:0043229"")",NA
"15","darkgreen",TRUE,0.0166763816209719,67,151,7,0.0463576158940397,0.104477611940299,"REAC:R-HSA-909733","REAC","Interferon alpha/beta signaling",10588,1102,"REAC:R-HSA-913531",NA
"16","darkgrey",TRUE,0.0037135938082669,4723,209,87,0.416267942583732,0.0184204954478086,"GO:0032991","GO:CC","protein-containing complex",16963,1590,"GO:0005575",NA
"17","darkgrey",TRUE,0.0324499352424078,8,209,3,0.0143540669856459,0.375,"GO:0030130","GO:CC","clathrin coat of trans-Golgi network vesicle",16963,1089,"c(""GO:0005794"", ""GO:0012510"", ""GO:0030125"")",NA
"18","darkgrey",TRUE,0.0482327512794707,9,209,3,0.0143540669856459,0.333333333333333,"GO:0012510","GO:CC","trans-Golgi network transport vesicle membrane",16963,840,"c(""GO:0030140"", ""GO:0030658"", ""GO:0030660"", ""GO:0030665"")",NA
"19","darkmagenta",TRUE,0.0197198203750484,2,145,2,0.0137931034482759,1,"GO:0031416","GO:CC","NatB complex",16963,1345,"GO:0031414",NA
"20","darkmagenta",TRUE,0.0404520088631474,2,133,2,0.0150375939849624,1,"GO:0071885","GO:MF","N-terminal protein N-methyltransferase activity",16268,10110,"GO:0008276",NA
"21","darkolivegreen",TRUE,0.0401083083630166,2,130,2,0.0153846153846154,1,"GO:0004557","GO:MF","alpha-galactosidase activity",16268,1156,"GO:0015925",NA
"22","darkolivegreen",TRUE,0.0401083083630166,2,130,2,0.0153846153846154,1,"GO:0050733","GO:MF","RS domain binding",16268,9124,"GO:0019904",NA
"23","darkorange2",TRUE,0.0171281553378554,12994,167,148,0.88622754491018,0.0113898722487302,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"24","darkorange2",TRUE,0.00666485754120884,159,89,9,0.101123595505618,0.0566037735849057,"KEGG:03013","KEGG","RNA transport",7747,204,"KEGG:00000",NA
"25","darkseagreen4",TRUE,0.0263846428822407,1025,111,19,0.171171171171171,0.0185365853658537,"GO:0043169","GO:MF","cation binding",16268,6833,"GO:0043167",NA
"26","darkturquoise",TRUE,0.00706695094258292,835,163,24,0.147239263803681,0.0287425149700599,"GO:0006396","GO:BP","RNA processing",15979,2421,"c(""GO:0010467"", ""GO:0016070"")",NA
"27","darkturquoise",TRUE,0.0195836690265514,768,163,22,0.134969325153374,0.0286458333333333,"GO:0016071","GO:BP","mRNA metabolic process",15979,5718,"GO:0016070",NA
"28","darkturquoise",TRUE,0.0205125835879357,105,163,8,0.049079754601227,0.0761904761904762,"GO:0045047","GO:BP","protein targeting to ER",15979,13225,"c(""GO:0006605"", ""GO:0072599"")",NA
"29","darkturquoise",TRUE,0.0249700713110824,178,163,10,0.0613496932515337,0.0561797752808989,"GO:0006413","GO:BP","translational initiation",15979,2437,"c(""GO:0006412"", ""GO:0044237"")",NA
"30","darkturquoise",TRUE,0.0270033862914432,109,163,8,0.049079754601227,0.073394495412844,"GO:0072599","GO:BP","establishment of protein localization to endoplasmic reticulum",15979,20662,"c(""GO:0070972"", ""GO:0072594"")",NA
"31","darkturquoise",TRUE,0.00141836689679498,4723,179,78,0.435754189944134,0.0165149269532077,"GO:0032991","GO:CC","protein-containing complex",16963,1590,"GO:0005575",NA
"32","darkturquoise",TRUE,0.00552985034608256,213,179,11,0.0614525139664804,0.0516431924882629,"GO:0005840","GO:CC","ribosome",16963,497,"GO:0043232",NA
"33","darkturquoise",TRUE,0.0150274008481814,637,179,19,0.106145251396648,0.0298273155416013,"GO:1990904","GO:CC","ribonucleoprotein complex",16963,4437,"GO:0032991",NA
"34","darkturquoise",TRUE,0.0398192741063755,46,179,5,0.0279329608938547,0.108695652173913,"GO:0022627","GO:CC","cytosolic small ribosomal subunit",16963,1035,"c(""GO:0015935"", ""GO:0022626"")",NA
"35","darkturquoise",TRUE,0.0437197130522843,106,179,7,0.0391061452513966,0.0660377358490566,"GO:0022626","GO:CC","cytosolic ribosome",16963,1034,"c(""GO:0005829"", ""GO:0005840"")",NA
"36","darkturquoise",TRUE,0.0437679162534517,10,179,3,0.0167597765363128,0.3,"GO:0005885","GO:CC","Arp2/3 protein complex",16963,531,"c(""GO:0015629"", ""GO:0032991"")",NA
"37","darkturquoise",TRUE,0.00175510914772097,1736,179,40,0.223463687150838,0.0230414746543779,"GO:0003723","GO:MF","RNA binding",16268,446,"GO:0003676",NA
"38","darkturquoise",TRUE,0.00048954578429686,94,122,9,0.0737704918032787,0.0957446808510638,"REAC:R-HSA-2408557","REAC","Selenocysteine synthesis",10588,1926,"REAC:R-HSA-2408522",NA
"39","darkturquoise",TRUE,0.00304516530889936,117,122,9,0.0737704918032787,0.0769230769230769,"REAC:R-HSA-2408522","REAC","Selenoamino acid metabolism",10588,1925,"REAC:R-HSA-71291",NA
"40","darkturquoise",TRUE,0.00472779900220764,94,122,8,0.0655737704918033,0.0851063829787234,"REAC:R-HSA-156842","REAC","Eukaryotic Translation Elongation",10588,780,"REAC:R-HSA-72766",NA
"41","darkturquoise",TRUE,0.00862654900113157,102,122,8,0.0655737704918033,0.0784313725490196,"REAC:R-HSA-72689","REAC","Formation of a pool of free 40S subunits",10588,854,"REAC:R-HSA-72737",NA
"42","darkturquoise",TRUE,0.0107524211247031,52,122,6,0.0491803278688525,0.115384615384615,"REAC:R-HSA-72695","REAC","Formation of the ternary complex, and subsequently, the 43S complex",10588,865,"REAC:R-HSA-72737",NA
"43","darkturquoise",TRUE,0.0119766608778296,292,122,13,0.10655737704918,0.0445205479452055,"REAC:R-HSA-72766","REAC","Translation",10588,2264,"REAC:R-HSA-392499",NA
"44","darkturquoise",TRUE,0.0169962080648984,112,122,8,0.0655737704918033,0.0714285714285714,"REAC:R-HSA-156827","REAC","L13a-mediated translational silencing of Ceruloplasmin expression",10588,1163,"REAC:R-HSA-72613",NA
"45","darkturquoise",TRUE,0.0181168523290671,113,122,8,0.0655737704918033,0.0707964601769911,"REAC:R-HSA-1799339","REAC","SRP-dependent cotranslational protein targeting to membrane",10588,1898,"REAC:R-HSA-72766",NA
"46","darkturquoise",TRUE,0.0181168523290671,113,122,8,0.0655737704918033,0.0707964601769911,"REAC:R-HSA-72706","REAC","GTP hydrolysis and joining of the 60S ribosomal subunit",10588,916,"REAC:R-HSA-72737",NA
"47","darkturquoise",TRUE,0.0189447752464881,183,122,10,0.0819672131147541,0.0546448087431694,"REAC:R-HSA-6791226","REAC","Major pathway of rRNA processing in the nucleolus and cytosol",10588,1247,"REAC:R-HSA-8868773",NA
"48","darkturquoise",TRUE,0.0222845935171712,59,122,6,0.0491803278688525,0.101694915254237,"REAC:R-HSA-72649","REAC","Translation initiation complex formation",10588,2265,"REAC:R-HSA-72662",NA
"49","darkturquoise",TRUE,0.0222845935171712,59,122,6,0.0491803278688525,0.101694915254237,"REAC:R-HSA-72702","REAC","Ribosomal scanning and start codon recognition",10588,1861,"REAC:R-HSA-72737",NA
"50","darkturquoise",TRUE,0.0245295662840984,60,122,6,0.0491803278688525,0.1,"REAC:R-HSA-72662","REAC","Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S",10588,100,"REAC:R-HSA-72737",NA
"51","darkturquoise",TRUE,0.0278204565861084,120,122,8,0.0655737704918033,0.0666666666666667,"REAC:R-HSA-72737","REAC","Cap-dependent Translation Initiation",10588,281,"REAC:R-HSA-72613",NA
"52","darkturquoise",TRUE,0.0278204565861084,120,122,8,0.0655737704918033,0.0666666666666667,"REAC:R-HSA-72613","REAC","Eukaryotic Translation Initiation",10588,781,"REAC:R-HSA-72766",NA
"53","darkturquoise",TRUE,0.029670969820756,193,122,10,0.0819672131147541,0.0518134715025907,"REAC:R-HSA-8868773","REAC","rRNA processing in the nucleus and cytosol",10588,2411,"REAC:R-HSA-72312",NA
"54","darkturquoise",TRUE,0.0302540472994886,90,122,7,0.0573770491803279,0.0777777777777778,"REAC:R-HSA-192823","REAC","Viral mRNA Translation",10588,2341,"REAC:R-HSA-168273",NA
"55","darkturquoise",TRUE,0.0302540472994886,90,122,7,0.0573770491803279,0.0777777777777778,"REAC:R-HSA-156902","REAC","Peptide chain elongation",10588,1544,"REAC:R-HSA-156842",NA
"56","darkturquoise",TRUE,0.0399046652905945,94,122,7,0.0573770491803279,0.074468085106383,"REAC:R-HSA-72764","REAC","Eukaryotic Translation Termination",10588,782,"REAC:R-HSA-72766",NA
"57","darkturquoise",TRUE,0.0451789158750672,203,122,10,0.0819672131147541,0.0492610837438424,"REAC:R-HSA-72312","REAC","rRNA processing",10588,2409,"REAC:R-HSA-8953854",NA
"58","darkturquoise",TRUE,0.045593853939934,96,122,7,0.0573770491803279,0.0729166666666667,"REAC:R-HSA-975956","REAC","Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)",10588,1437,"REAC:R-HSA-927802",NA
"59","floralwhite",TRUE,0.0492744170782885,483,105,11,0.104761904761905,0.0227743271221532,"GO:0000139","GO:CC","Golgi membrane",16963,20,"c(""GO:0005794"", ""GO:0098588"")",NA
"60","green",TRUE,0.0188313882466598,26,186,5,0.0268817204301075,0.192307692307692,"GO:0042558","GO:BP","pteridine-containing compound metabolic process",15979,11941,"c(""GO:0006725"", ""GO:0046483"", ""GO:1901360"", ""GO:1901564"")",NA
"61","green",TRUE,0.047473241433876,31,98,4,0.0408163265306122,0.129032258064516,"KEGG:01523","KEGG","Antifolate resistance",7747,192,"KEGG:00000",NA
"62","green",TRUE,0.0132841516869802,16,133,4,0.0300751879699248,0.25,"REAC:R-HSA-196757","REAC","Metabolism of folate and pterines",10588,1271,"REAC:R-HSA-196849",NA
"63","grey60",TRUE,0.0144153559183172,10,129,3,0.0232558139534884,0.3,"GO:0097440","GO:CC","apical dendrite",16963,3383,"GO:0030425",NA
"64","honeydew1",TRUE,0.0337586266197042,11,154,3,0.0194805194805195,0.272727272727273,"GO:0032433","GO:CC","filopodium tip",16963,1549,"c(""GO:0030175"", ""GO:0110165"")",NA
"65","ivory",TRUE,0.0496588711734215,2,156,2,0.0128205128205128,1,"GO:0030158","GO:MF","protein xylosyltransferase activity",16268,4787,"c(""GO:0035252"", ""GO:0140096"")",NA
"66","ivory",TRUE,0.0496588711734215,2,156,2,0.0128205128205128,1,"GO:0004923","GO:MF","leukemia inhibitory factor receptor activity",16268,1476,"GO:0004897",NA
"67","lavenderblush3",TRUE,0.0355053232399048,3,62,2,0.032258064516129,0.666666666666667,"REAC:R-HSA-8853336","REAC","Signaling by plasma membrane FGFR1 fusions",10588,2037,"REAC:R-HSA-1839124",NA
"68","lightpink4",TRUE,0.0250595045859288,3,97,2,0.0206185567010309,0.666666666666667,"GO:0000306","GO:CC","extrinsic component of vacuolar membrane",16963,58,"c(""GO:0005774"", ""GO:0031312"")",NA
"69","lightsteelblue",TRUE,0.0499388079223489,2,85,2,0.0235294117647059,1,"GO:0099527","GO:BP","postsynapse to nucleus signaling pathway",15979,22680,"GO:0098926",NA
"70","lightyellow",TRUE,4.25107632532058e-05,9937,263,194,0.737642585551331,0.0195229948676663,"GO:0005737","GO:CC","cytoplasm",16963,402,"c(""GO:0005622"", ""GO:0110165"")",NA
"71","lightyellow",TRUE,0.000682274006695181,12994,263,231,0.878326996197719,0.0177774357395721,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"72","lightyellow",TRUE,0.00373598060040482,261,263,15,0.0570342205323194,0.0574712643678161,"GO:0098798","GO:CC","mitochondrial protein complex",16963,3662,"c(""GO:0005739"", ""GO:0032991"")",NA
"73","magenta",TRUE,0.0258561610409862,77,61,5,0.0819672131147541,0.0649350649350649,"KEGG:05412","KEGG","Arrhythmogenic right ventricular cardiomyopathy (ARVC)",7747,460,"KEGG:00000",NA
"74","mediumorchid",TRUE,0.0142094000205865,32,242,6,0.0247933884297521,0.1875,"GO:0051965","GO:BP","positive regulation of synapse assembly",15979,16476,"c(""GO:0007416"", ""GO:0051962"", ""GO:0051963"", ""GO:1901890"")",NA
"75","mediumpurple2",TRUE,0.0496887720961713,7,259,3,0.0115830115830116,0.428571428571429,"GO:0015180","GO:MF","L-alanine transmembrane transporter activity",16268,3025,"c(""GO:0015179"", ""GO:0022858"")",NA
"76","mediumpurple3",TRUE,0.0465312429541571,48,151,5,0.033112582781457,0.104166666666667,"GO:0016836","GO:MF","hydro-lyase activity",16268,3830,"GO:0016835",NA
"77","mediumpurple3",TRUE,0.0497620346197972,2,151,2,0.0132450331125828,1,"GO:0004649","GO:MF","poly(ADP-ribose) glycohydrolase activity",16268,1242,"GO:0004553",NA
"78","mediumpurple3",TRUE,0.0170304940586918,147,86,8,0.0930232558139535,0.054421768707483,"KEGG:04072","KEGG","Phospholipase D signaling pathway",7747,239,"KEGG:00000",NA
"79","navajowhite2",TRUE,0.0195427286560799,55,147,6,0.0408163265306122,0.109090909090909,"GO:0075733","GO:BP","intracellular transport of virus",15979,21164,"c(""GO:0019058"", ""GO:0046794"")",NA
"80","navajowhite2",TRUE,0.026674238330664,58,147,6,0.0408163265306122,0.103448275862069,"GO:0046794","GO:BP","transport of virus",15979,14577,"c(""GO:0016032"", ""GO:0044766"")",NA
"81","navajowhite2",TRUE,0.0357730360030576,61,147,6,0.0408163265306122,0.0983606557377049,"GO:0044766","GO:BP","multi-organism transport",15979,13108,"c(""GO:0006810"", ""GO:1902579"")",NA
"82","navajowhite2",TRUE,0.0357730360030576,61,147,6,0.0408163265306122,0.0983606557377049,"GO:1902579","GO:BP","multi-organism localization",15979,25914,"c(""GO:0051179"", ""GO:0051704"")",NA
"83","navajowhite2",TRUE,0.0333527257382407,681,151,17,0.112582781456954,0.0249632892804699,"GO:0016604","GO:CC","nuclear body",16963,917,"c(""GO:0005654"", ""GO:0110165"")",NA
"84","navajowhite2",TRUE,0.0466236057209944,71,113,6,0.0530973451327434,0.0845070422535211,"REAC:R-HSA-159236","REAC","Transport of Mature mRNA derived from an Intron-Containing Transcript",10588,2281,"REAC:R-HSA-72202",NA
"85","orangered4",TRUE,0.0188998217697609,119,38,5,0.131578947368421,0.0420168067226891,"KEGG:04722","KEGG","Neurotrophin signaling pathway",7747,328,"KEGG:00000",NA
"86","paleturquoise",TRUE,0.0188645501946606,4576,178,78,0.438202247191011,0.0170454545454545,"GO:0006139","GO:BP","nucleobase-containing compound metabolic process",15979,2192,"c(""GO:0006725"", ""GO:0034641"", ""GO:0044238"", ""GO:0046483"", ""GO:1901360"")",NA
"87","paleturquoise",TRUE,0.0354572388718691,4731,178,79,0.443820224719101,0.0166983724371169,"GO:0046483","GO:BP","heterocycle metabolic process",15979,14371,"GO:0044237",NA
"88","paleturquoise",TRUE,0.0418210610414698,4751,178,79,0.443820224719101,0.0166280782993054,"GO:0006725","GO:BP","cellular aromatic compound metabolic process",15979,2726,"GO:0044237",NA
"89","paleturquoise",TRUE,0.0106594351745174,11093,186,147,0.790322580645161,0.0132516001081763,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"90","paleturquoise",TRUE,0.0153647970259671,12994,186,164,0.881720430107527,0.0126212097891334,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"91","paleturquoise",TRUE,0.00791718892723475,15,187,4,0.0213903743315508,0.266666666666667,"GO:0070628","GO:MF","proteasome binding",16268,9993,"GO:0044877",NA
"92","paleturquoise",TRUE,0.0114727760631452,6,123,3,0.024390243902439,0.5,"REAC:R-HSA-177135","REAC","Conjugation of benzoate with glycine",10588,358,"REAC:R-HSA-159424",NA
"93","paleturquoise",TRUE,0.0315807683224323,8,123,3,0.024390243902439,0.375,"REAC:R-HSA-177128","REAC","Conjugation of salicylate with glycine",10588,361,"REAC:R-HSA-159424",NA
"94","paleturquoise",TRUE,0.0384101834672204,125,123,8,0.0650406504065041,0.064,"REAC:R-HSA-162909","REAC","Host Interactions of HIV factors",10588,1013,"REAC:R-HSA-162906",NA
"95","paleturquoise",TRUE,0.0469693793678764,9,123,3,0.024390243902439,0.333333333333333,"REAC:R-HSA-156587","REAC","Amino Acid conjugation",10588,131,"REAC:R-HSA-156580",NA
"96","paleturquoise",TRUE,0.0469693793678764,9,123,3,0.024390243902439,0.333333333333333,"REAC:R-HSA-159424","REAC","Conjugation of carboxylic acids",10588,359,"REAC:R-HSA-156587",NA
"97","palevioletred3",TRUE,0.0124048323451663,176,187,11,0.0588235294117647,0.0625,"GO:0048511","GO:BP","rhythmic process",15979,15050,"GO:0008150",NA
"98","palevioletred3",TRUE,0.0261483951892659,156,187,10,0.053475935828877,0.0641025641025641,"GO:0007623","GO:BP","circadian rhythm",15979,3518,"GO:0048511",NA
"99","palevioletred3",TRUE,0.000978663102602954,3932,206,77,0.37378640776699,0.0195829094608342,"GO:0005654","GO:CC","nucleoplasm",16963,327,"c(""GO:0031981"", ""GO:0110165"")",NA
"100","palevioletred3",TRUE,0.0122153325587978,4639,206,83,0.402912621359223,0.0178917870230653,"GO:0031981","GO:CC","nuclear lumen",16963,1472,"c(""GO:0005634"", ""GO:0070013"")",NA
"101","palevioletred3",TRUE,0.0206081265779978,6463,206,106,0.514563106796116,0.0164010521429677,"GO:0005634","GO:CC","nucleus",16963,310,"GO:0043231",NA
"102","palevioletred3",TRUE,0.0359045427654479,5682,206,95,0.461165048543689,0.0167194649771207,"GO:0070013","GO:CC","intracellular organelle lumen",16963,2747,"c(""GO:0043229"", ""GO:0043233"")",NA
"103","palevioletred3",TRUE,0.0359045427654479,5682,206,95,0.461165048543689,0.0167194649771207,"GO:0031974","GO:CC","membrane-enclosed lumen",16963,1466,"GO:0110165",NA
"104","palevioletred3",TRUE,0.0359045427654479,5682,206,95,0.461165048543689,0.0167194649771207,"GO:0043233","GO:CC","organelle lumen",16963,2155,"c(""GO:0031974"", ""GO:0043226"")",NA
"105","palevioletred3",TRUE,0.0401550435566502,11333,206,162,0.786407766990291,0.0142945380746493,"GO:0043227","GO:CC","membrane-bounded organelle",16963,2149,"GO:0043226",NA
"106","pink",TRUE,0.0134650883266081,10,109,3,0.0275229357798165,0.3,"GO:0009982","GO:MF","pseudouridine synthase activity",16268,2770,"GO:0016866",NA
"107","plum1",TRUE,0.0150877018575057,7,146,3,0.0205479452054795,0.428571428571429,"GO:0032050","GO:MF","clathrin heavy chain binding",16268,5381,"GO:0030276",NA
"108","plum2",TRUE,0.0211632686816449,12994,217,189,0.870967741935484,0.0145451746960135,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"109","plum2",TRUE,0.0289528854697005,4850,217,88,0.405529953917051,0.0181443298969072,"GO:0005829","GO:CC","cytosol",16963,487,"c(""GO:0005737"", ""GO:0110165"")",NA
"110","purple",TRUE,0.000281674828110006,12994,240,213,0.8875,0.0163921810066184,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"111","purple",TRUE,0.000300550242641181,9937,240,176,0.733333333333333,0.0177115829727282,"GO:0005737","GO:CC","cytoplasm",16963,402,"c(""GO:0005622"", ""GO:0110165"")",NA
"112","purple",TRUE,0.0127848305076476,4850,240,97,0.404166666666667,0.02,"GO:0005829","GO:CC","cytosol",16963,487,"c(""GO:0005737"", ""GO:0110165"")",NA
"113","purple",TRUE,0.0182134435257094,944,240,29,0.120833333333333,0.0307203389830508,"GO:0031967","GO:CC","organelle envelope",16963,1460,"c(""GO:0031975"", ""GO:0043227"", ""GO:0043229"")",NA
"114","purple",TRUE,0.0182134435257094,944,240,29,0.120833333333333,0.0307203389830508,"GO:0031975","GO:CC","envelope",16963,1467,"GO:0110165",NA
"115","purple",TRUE,0.0424982496302885,11093,240,183,0.7625,0.0164968899305869,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"116","red",TRUE,0.0136194202753312,11093,213,166,0.779342723004695,0.014964391958893,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"117","royalblue",TRUE,0.0399979347802004,19,91,3,0.032967032967033,0.157894736842105,"GO:0035145","GO:CC","exon-exon junction complex",16963,1853,"c(""GO:0005634"", ""GO:0032991"")",NA
"118","salmon",TRUE,0.00926747565160542,2,103,2,0.0194174757281553,1,"GO:0042709","GO:CC","succinate-CoA ligase complex",16963,2095,"c(""GO:0045239"", ""GO:1902494"")",NA
"119","salmon",TRUE,0.0355586449113526,319,103,9,0.087378640776699,0.0282131661442006,"GO:0031301","GO:CC","integral component of organelle membrane",16963,1296,"c(""GO:0016021"", ""GO:0031300"")",NA
"120","salmon",TRUE,0.016924783602763,30,106,4,0.0377358490566038,0.133333333333333,"GO:0016878","GO:MF","acid-thiol ligase activity",16268,3871,"GO:0016877",NA
"121","salmon",TRUE,0.0329331511850015,37,68,4,0.0588235294117647,0.108108108108108,"REAC:R-HSA-5685938","REAC","HDR through Single Strand Annealing (SSA)",10588,983,"REAC:R-HSA-5693567",NA
"122","salmon",TRUE,0.040620074788158,39,68,4,0.0588235294117647,0.102564102564103,"REAC:R-HSA-5693616","REAC","Presynaptic phase of homologous DNA pairing and strand exchange",10588,1613,"REAC:R-HSA-5693579",NA
"123","salmon4",TRUE,0.00438990982226168,11093,205,162,0.790243902439024,0.0146038042008474,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"124","salmon4",TRUE,0.0164626372021568,12231,205,172,0.839024390243902,0.014062627749162,"GO:0043226","GO:CC","organelle",16963,2148,"GO:0110165",NA
"125","salmon4",TRUE,0.0480020059810289,11333,205,161,0.785365853658537,0.0142063001852996,"GO:0043227","GO:CC","membrane-bounded organelle",16963,2149,"GO:0043226",NA
"126","sienna3",TRUE,0.0499575557038343,2,113,2,0.0176991150442478,1,"REAC:R-HSA-380612","REAC","Metabolism of serotonin",10588,1282,"REAC:R-HSA-380615",NA
"127","skyblue1",TRUE,0.0238742335908663,9,97,3,0.0309278350515464,0.333333333333333,"REAC:R-HSA-198203","REAC","PI3K/AKT activation",10588,1499,"REAC:R-HSA-187037",NA
"128","skyblue2",TRUE,0.0413777101637395,3,65,2,0.0307692307692308,0.666666666666667,"REAC:R-HSA-5635851","REAC","GLI proteins bind promoters of Hh responsive genes to promote transcription",10588,906,"REAC:R-HSA-5632684",NA
"129","skyblue3",TRUE,0.0305289972040628,1608,172,36,0.209302325581395,0.0223880597014925,"GO:0046907","GO:BP","intracellular transport",15979,14653,"c(""GO:0006810"", ""GO:0051641"", ""GO:0051649"")",NA
"130","skyblue3",TRUE,0.0257513452198785,84,86,6,0.0697674418604651,0.0714285714285714,"KEGG:04012","KEGG","ErbB signaling pathway",7747,223,"KEGG:00000",NA
"131","skyblue3",TRUE,0.0182115935955634,36,118,5,0.0423728813559322,0.138888888888889,"REAC:R-HSA-109704","REAC","PI3K Cascade",10588,1495,"c(""REAC:R-HSA-112399"", ""REAC:R-HSA-9607240"")",NA
"132","skyblue3",TRUE,0.0270819070594607,39,118,5,0.0423728813559322,0.128205128205128,"REAC:R-HSA-112399","REAC","IRS-mediated signalling",10588,1044,"c(""REAC:R-HSA-2428928"", ""REAC:R-HSA-74751"")",NA
"133","skyblue3",TRUE,0.043525170510755,9,118,3,0.0254237288135593,0.333333333333333,"REAC:R-HSA-198203","REAC","PI3K/AKT activation",10588,1499,"REAC:R-HSA-187037",NA
"134","skyblue3",TRUE,0.043697964060931,43,118,5,0.0423728813559322,0.116279069767442,"REAC:R-HSA-2428928","REAC","IRS-related events triggered by IGF1R",10588,1045,"REAC:R-HSA-2428924",NA
"135","skyblue3",TRUE,0.043697964060931,43,118,5,0.0423728813559322,0.116279069767442,"REAC:R-HSA-2428924","REAC","IGF1R signaling cascade",10588,1022,"REAC:R-HSA-2404192",NA
"136","skyblue3",TRUE,0.0488647008363626,44,118,5,0.0423728813559322,0.113636363636364,"REAC:R-HSA-2404192","REAC","Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)",10588,2022,"REAC:R-HSA-9006934",NA
"137","steelblue",TRUE,0.0113465386812033,73,88,5,0.0568181818181818,0.0684931506849315,"GO:0048475","GO:CC","coated membrane",16963,2564,"GO:0016020",NA
"138","steelblue",TRUE,0.0113465386812033,73,88,5,0.0568181818181818,0.0684931506849315,"GO:0030117","GO:CC","membrane coat",16963,1076,"c(""GO:0005737"", ""GO:0048475"", ""GO:0098796"")",NA
"139","steelblue",TRUE,0.0331544694943231,126,40,5,0.125,0.0396825396825397,"KEGG:04114","KEGG","Oocyte meiosis",7747,246,"KEGG:00000",NA
"140","tan",TRUE,0.00381098397439919,12994,196,174,0.887755102040816,0.0133907957518855,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"141","tan",TRUE,0.0366860715802383,4890,188,81,0.430851063829787,0.0165644171779141,"GO:0003824","GO:MF","catalytic activity",16268,520,"GO:0003674",NA
"142","thistle1",TRUE,0.00470311559794943,49,165,6,0.0363636363636364,0.122448979591837,"GO:0003684","GO:MF","damaged DNA binding",16268,414,"GO:0003677",NA
"143","thistle1",TRUE,0.0328086351984155,33,83,4,0.0481927710843374,0.121212121212121,"KEGG:03410","KEGG","Base excision repair",7747,215,"KEGG:00000",NA
"144","thistle2",TRUE,0.00133953268293821,12994,230,203,0.882608695652174,0.0156225950438664,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"145","thistle2",TRUE,0.0129405474759006,11093,230,178,0.773913043478261,0.0160461552330298,"GO:0043229","GO:CC","intracellular organelle",16963,2151,"c(""GO:0005622"", ""GO:0043226"")",NA
"146","thistle2",TRUE,0.00107652412241703,3,232,3,0.0129310344827586,1,"GO:0019797","GO:MF","procollagen-proline 3-dioxygenase activity",16268,4614,"c(""GO:0019798"", ""GO:0031544"")",NA
"147","thistle2",TRUE,0.00426062633460505,4,232,3,0.0129310344827586,0.75,"GO:0031544","GO:MF","peptidyl-proline 3-dioxygenase activity",16268,5134,"GO:0031543",NA
"148","yellow4",TRUE,0.0055343440926393,9937,208,151,0.725961538461538,0.0151957331186475,"GO:0005737","GO:CC","cytoplasm",16963,402,"c(""GO:0005622"", ""GO:0110165"")",NA
"149","yellow4",TRUE,0.00905485733596725,4850,208,87,0.418269230769231,0.0179381443298969,"GO:0005829","GO:CC","cytosol",16963,487,"c(""GO:0005737"", ""GO:0110165"")",NA
"150","yellow4",TRUE,0.0169998682093607,12994,208,182,0.875,0.0140064645220871,"GO:0005622","GO:CC","intracellular",16963,299,"GO:0005575",NA
"151","yellow4",TRUE,0.0237423550760287,11572,209,173,0.827751196172249,0.0149498790183201,"GO:0005515","GO:MF","protein binding",16268,1897,"GO:0005488",NA
"152","yellowgreen",TRUE,0.0154244035027446,9269,225,162,0.72,0.0174776135505448,"GO:0044237","GO:BP","cellular metabolic process",15979,12812,"c(""GO:0008152"", ""GO:0009987"")",NA
"153","yellowgreen",TRUE,0.002803676836537,1291,229,37,0.161572052401747,0.0286599535243997,"GO:1902494","GO:CC","catalytic complex",16963,3994,"GO:0032991",NA
"154","yellowgreen",TRUE,0.00515983637411196,4723,229,93,0.406113537117904,0.0196908744442092,"GO:0032991","GO:CC","protein-containing complex",16963,1590,"GO:0005575",NA
"155","yellowgreen",TRUE,0.0153692486927194,4890,234,99,0.423076923076923,0.0202453987730061,"GO:0003824","GO:MF","catalytic activity",16268,520,"GO:0003674",NA
"156","yellowgreen",TRUE,0.0268929049922614,11572,234,192,0.82051282051282,0.0165917732457656,"GO:0005515","GO:MF","protein binding",16268,1897,"GO:0005488",NA
"157","yellowgreen",TRUE,0.0439714330824532,54,234,6,0.0256410256410256,0.111111111111111,"GO:0004402","GO:MF","histone acetyltransferase activity",16268,1026,"GO:0061733",NA


"row_id","blast","patient_id","patient_code","blast2","blast_ssam_se_id","accession_id","seq_name","subtype","country","sampling_year","days_from_first_sample","fiebig_stage","days_from_treatment_end","days_from_treatment_start","days_from_infection","days_from_seroconversion","genomic_region","seq_length","organism","pos","ncbi_url","pos_ini","pos_end","sampling.dates"
1,"Blast",31107,"221F","Blast",271494,"FJ186485","ZM221F07MAR03PB_101","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,855,"HIV-1","6625:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186485?report=graph&log$=seqview",6625,7478,"07-Mar-2003"
2,"Blast",31107,"221F","Blast",271493,"FJ186486","ZM221F07MAR03PB_103","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,894,"HIV-1","6581:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186486?report=graph&log$=seqview",6581,7478,"07-Mar-2003"
3,"Blast",31107,"221F","Blast",271492,"FJ186487","ZM221F07MAR03PB_2","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,924,"HIV-1","6560:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186487?report=graph&log$=seqview",6560,7478,"07-Mar-2003"
4,"Blast",31107,"221F","Blast",271491,"FJ186488","ZM221F07MAR03PB_28","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,819,"HIV-1","6639:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186488?report=graph&log$=seqview",6639,7478,"07-Mar-2003"
5,"Blast",31107,"221F","Blast",271490,"FJ186489","ZM221F07MAR03PB_29","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6560:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186489?report=graph&log$=seqview",6560,7478,"07-Mar-2003"
6,"Blast",31107,"221F","Blast",271489,"FJ186490","ZM221F07MAR03PB_34","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,897,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186490?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
7,"Blast",31107,"221F","Blast",271488,"FJ186491","ZM221F07MAR03PB_35","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186491?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
8,"Blast",31107,"221F","Blast",271487,"FJ186492","ZM221F07MAR03PB_37","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6581:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186492?report=graph&log$=seqview",6581,7478,"07-Mar-2003"
9,"Blast",31107,"221F","Blast",271486,"FJ186493","ZM221F07MAR03PB_4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,855,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186493?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
10,"Blast",31107,"221F","Blast",271485,"FJ186494","ZM221F07MAR03PB_41","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,855,"HIV-1","6625:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186494?report=graph&log$=seqview",6625,7478,"07-Mar-2003"
11,"Blast",31107,"221F","Blast",271484,"FJ186495","ZM221F07MAR03PB_43","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,870,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186495?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
12,"Blast",31107,"221F","Blast",271483,"FJ186496","ZM221F07MAR03PB_45","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186496?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
13,"Blast",31107,"221F","Blast",271482,"FJ186497","ZM221F07MAR03PB_46","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186497?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
14,"Blast",31107,"221F","Blast",271481,"FJ186498","ZM221F07MAR03PB_47","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186498?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
15,"Blast",31107,"221F","Blast",271480,"FJ186499","ZM221F07MAR03PB_58","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,867,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186499?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
16,"Blast",31107,"221F","Blast",271479,"FJ186500","ZM221F07MAR03PB_6","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,837,"HIV-1","6645:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186500?report=graph&log$=seqview",6645,7478,"07-Mar-2003"
17,"Blast",31107,"221F","Blast",271478,"FJ186501","ZM221F07MAR03PB_67","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186501?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
18,"Blast",31107,"221F","Blast",271477,"FJ186502","ZM221F07MAR03PB_84","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,873,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186502?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
19,"Blast",31107,"221F","Blast",271476,"FJ186503","ZM221F07MAR03PB_87","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,879,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186503?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
20,"Blast",31107,"221F","Blast",271475,"FJ186504","ZM221F07MAR03PB_91","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,870,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186504?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
21,"Blast",31107,"221F","Blast",271474,"FJ186505","ZM221F07MAR03PB_95","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,822,"HIV-1","6656:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186505?report=graph&log$=seqview",6656,7478,"07-Mar-2003"
22,"Blast",31107,"221F","Blast",271473,"FJ186506","ZM221F07MAR03PL_1","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,897,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186506?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
23,"Blast",31107,"221F","Blast",271472,"FJ186507","ZM221F07MAR03PL_14","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,924,"HIV-1","6560:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186507?report=graph&log$=seqview",6560,7478,"07-Mar-2003"
24,"Blast",31107,"221F","Blast",271471,"FJ186508","ZM221F07MAR03PL_33","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,870,"HIV-1","6606:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186508?report=graph&log$=seqview",6606,7478,"07-Mar-2003"
25,"Blast",31107,"221F","Blast",271470,"FJ186509","ZM221F07MAR03PL_35","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186509?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
26,"Blast",31107,"221F","Blast",271469,"FJ186510","ZM221F07MAR03PL_42","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,924,"HIV-1","6560:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186510?report=graph&log$=seqview",6560,7478,"07-Mar-2003"
27,"Blast",31107,"221F","Blast",271468,"FJ186511","ZM221F07MAR03PL_44","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,852,"HIV-1","6615:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186511?report=graph&log$=seqview",6615,7478,"07-Mar-2003"
28,"Blast",31107,"221F","Blast",271467,"FJ186512","ZM221F07MAR03PL_48","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,855,"HIV-1","6625:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186512?report=graph&log$=seqview",6625,7478,"07-Mar-2003"
29,"Blast",31107,"221F","Blast",271466,"FJ186513","ZM221F07MAR03PL_51","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186513?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
30,"Blast",31107,"221F","Blast",271465,"FJ186514","ZM221F07MAR03PL_55","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6598:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186514?report=graph&log$=seqview",6598,7478,"07-Mar-2003"
31,"Blast",31107,"221F","Blast",271464,"FJ186515","ZM221F07MAR03PL_57","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,837,"HIV-1","6624:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186515?report=graph&log$=seqview",6624,7478,"07-Mar-2003"
32,"Blast",31107,"221F","Blast",271463,"FJ186516","ZM221F07MAR03PL_70","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186516?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
33,"Blast",31107,"221F","Blast",271462,"FJ186517","ZM221F07MAR03PL_71","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186517?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
34,"Blast",31107,"221F","Blast",271461,"FJ186518","ZM221F07MAR03PL_72","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186518?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
35,"Blast",31107,"221F","Blast",271460,"FJ186519","ZM221F07MAR03PL_80","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186519?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
36,"Blast",31107,"221F","Blast",271459,"FJ186520","ZM221F07MAR03PL_83","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186520?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
37,"Blast",31107,"221F","Blast",271458,"FJ186521","ZM221F07MAR03PL_9","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186521?report=graph&log$=seqview",6600,7478,"07-Mar-2003"
38,"Blast",31107,"221F","Blast",313585,"FJ606281","ZM221F","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,1509,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/FJ606281?report=graph&log$=seqview",790,2292,"08-Mar-2003"
39,"Blast",31107,"221F","Blast",450965,"HQ858211","ZM221_F_CA_14B7","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858211?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
40,"Blast",31107,"221F","Blast",450699,"HQ858212","ZM221_F_SW_14A11","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858212?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
41,"Blast",31107,"221F","Blast",450964,"HQ858213","ZM221_F_SW_14A4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858213?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
42,"Blast",31107,"221F","Blast",450698,"HQ858214","ZM221_F_SW_14B2","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858214?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
43,"Blast",31107,"221F","Blast",450963,"HQ858215","ZM221_F_SW_14C2","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858215?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
44,"Blast",31107,"221F","Blast",450697,"HQ858216","ZM221_F_SW_14C4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,900,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858216?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
45,"Blast",31107,"221F","Blast",450962,"HQ858217","ZM221_F_SW_14C6","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858217?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
46,"Blast",31107,"221F","Blast",450696,"HQ858218","ZM221_F_SW_14D1","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858218?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
47,"Blast",31107,"221F","Blast",450961,"HQ858219","ZM221_F_SW_14D5","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,855,"HIV-1","6625:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858219?report=graph&log$=seqview",6625,7478,"08-Mar-2003"
48,"Blast",31107,"221F","Blast",450695,"HQ858220","ZM221_F_SW_14H14","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858220?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
49,"Blast",31107,"221F","Blast",450960,"HQ858221","ZM221_F_SW_14H16","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,924,"HIV-1","6560:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858221?report=graph&log$=seqview",6560,7478,"08-Mar-2003"
50,"Blast",31107,"221F","Blast",450694,"HQ858222","ZM221_F_SW_14H22","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858222?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
51,"Blast",31107,"221F","Blast",450959,"HQ858223","ZM221_F_SW_14H31","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858223?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
52,"Blast",31107,"221F","Blast",450693,"HQ858224","ZM221_F_SW_14H8","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858224?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
53,"Blast",31107,"221F","Blast",450958,"HQ858225","ZM221_F_SW_14H9","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858225?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
54,"Blast",31107,"221F","Blast",450692,"HQ858226","ZM221_F_SW_14I11","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858226?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
55,"Blast",31107,"221F","Blast",450957,"HQ858227","ZM221_F_SW_14I14","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858227?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
56,"Blast",31107,"221F","Blast",450691,"HQ858228","ZM221_F_SW_14I15","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858228?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
57,"Blast",31107,"221F","Blast",450956,"HQ858229","ZM221_F_SW_14I17","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858229?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
58,"Blast",31107,"221F","Blast",450690,"HQ858230","ZM221_F_SW_14I20","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858230?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
59,"Blast",31107,"221F","Blast",450955,"HQ858231","ZM221_F_SW_14I23","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858231?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
60,"Blast",31107,"221F","Blast",450689,"HQ858232","ZM221_F_SW_14I27","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858232?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
61,"Blast",31107,"221F","Blast",450954,"HQ858233","ZM221_F_SW_14I30","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858233?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
62,"Blast",31107,"221F","Blast",450688,"HQ858234","ZM221_F_SW_14I6","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858234?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
63,"Blast",31107,"221F","Blast",450953,"HQ858235","ZM221_F_SW_14I9","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858235?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
64,"Blast",31107,"221F","Blast",450687,"HQ858236","ZM221_F_SW_14J10","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858236?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
65,"Blast",31107,"221F","Blast",450952,"HQ858237","ZM221_F_SW_14J11","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858237?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
66,"Blast",31107,"221F","Blast",450686,"HQ858238","ZM221_F_SW_14J12","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858238?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
67,"Blast",31107,"221F","Blast",450951,"HQ858239","ZM221_F_SW_14J25","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858239?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
68,"Blast",31107,"221F","Blast",450685,"HQ858240","ZM221_F_SW_14J27","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858240?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
69,"Blast",31107,"221F","Blast",450950,"HQ858241","ZM221_F_SW_14J28","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858241?report=graph&log$=seqview",6608,7478,"08-Mar-2003"
70,"Blast",31107,"221F","Blast",450684,"HQ858242","ZM221_F_SW_14J29","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858242?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
71,"Blast",31107,"221F","Blast",450949,"HQ858243","ZM221_F_SW_14J30","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858243?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
72,"Blast",31107,"221F","Blast",450683,"HQ858244","ZM221_F_SW_14J5","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,903,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858244?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
73,"Blast",31107,"221F","Blast",450948,"HQ858245","ZM221_F_SW_14J9","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,864,"HIV-1","6600:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858245?report=graph&log$=seqview",6600,7478,"08-Mar-2003"
74,"Blast",31107,"221F","Blast",599491,"KM049513","ZM221F","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049513?report=graph&log$=seqview",8797,9417,"08-Mar-2003"
75,"Blast",31107,"221F","Blast",598604,"KM050400","ZM221F","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050400?report=graph&log$=seqview",2085,5096,"08-Mar-2003"
1,"Blast",31093,"221M","Blast",271457,"FJ186522","ZM221M07MAR03PB_2","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186522?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
2,"Blast",31093,"221M","Blast",271456,"FJ186523","ZM221M07MAR03PB_25","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186523?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
3,"Blast",31093,"221M","Blast",271455,"FJ186524","ZM221M07MAR03PB_27","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186524?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
4,"Blast",31093,"221M","Blast",271454,"FJ186525","ZM221M07MAR03PB_30","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186525?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
5,"Blast",31093,"221M","Blast",271453,"FJ186526","ZM221M07MAR03PB_31","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186526?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
6,"Blast",31093,"221M","Blast",271452,"FJ186527","ZM221M07MAR03PB_32","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186527?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
7,"Blast",31093,"221M","Blast",271451,"FJ186528","ZM221M07MAR03PB_4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186528?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
8,"Blast",31093,"221M","Blast",271450,"FJ186529","ZM221M07MAR03PB_55","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186529?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
9,"Blast",31093,"221M","Blast",271449,"FJ186530","ZM221M07MAR03PB_60","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186530?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
10,"Blast",31093,"221M","Blast",271448,"FJ186531","ZM221M07MAR03PB_64","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186531?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
11,"Blast",31093,"221M","Blast",271447,"FJ186532","ZM221M07MAR03PB_65","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186532?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
12,"Blast",31093,"221M","Blast",271446,"FJ186533","ZM221M07MAR03PB_69","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186533?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
13,"Blast",31093,"221M","Blast",271445,"FJ186534","ZM221M07MAR03PB_7","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186534?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
14,"Blast",31093,"221M","Blast",271444,"FJ186535","ZM221M07MAR03PB_70","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186535?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
15,"Blast",31093,"221M","Blast",271443,"FJ186536","ZM221M07MAR03PB_71","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186536?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
16,"Blast",31093,"221M","Blast",271442,"FJ186537","ZM221M07MAR03PB_74","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186537?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
17,"Blast",31093,"221M","Blast",271441,"FJ186538","ZM221M07MAR03PB_77","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186538?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
18,"Blast",31093,"221M","Blast",271440,"FJ186539","ZM221M07MAR03PB_78","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186539?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
19,"Blast",31093,"221M","Blast",271439,"FJ186540","ZM221M07MAR03PB_8","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186540?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
20,"Blast",31093,"221M","Blast",271438,"FJ186541","ZM221M07MAR03PB_80","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186541?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
21,"Blast",31093,"221M","Blast",271437,"FJ186542","ZM221M07MAR03PB_81","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186542?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
22,"Blast",31093,"221M","Blast",271436,"FJ186543","ZM221M07MAR03PB_82","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186543?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
23,"Blast",31093,"221M","Blast",271435,"FJ186544","ZM221M07MAR03PB_83","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186544?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
24,"Blast",31093,"221M","Blast",271434,"FJ186545","ZM221M07MAR03PB_84","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186545?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
25,"Blast",31093,"221M","Blast",271433,"FJ186546","ZM221M07MAR03PB_86","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186546?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
26,"Blast",31093,"221M","Blast",271432,"FJ186547","ZM221M07MAR03PB_87","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186547?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
27,"Blast",31093,"221M","Blast",271431,"FJ186548","ZM221M07MAR03PL_4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186548?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
28,"Blast",31093,"221M","Blast",271430,"FJ186549","ZM221M07MAR03PL_49","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186549?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
29,"Blast",31093,"221M","Blast",271429,"FJ186550","ZM221M07MAR03PL_5","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186550?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
30,"Blast",31093,"221M","Blast",271428,"FJ186551","ZM221M07MAR03PL_50","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186551?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
31,"Blast",31093,"221M","Blast",271427,"FJ186552","ZM221M07MAR03PL_52","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186552?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
32,"Blast",31093,"221M","Blast",271426,"FJ186553","ZM221M07MAR03PL_54","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186553?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
33,"Blast",31093,"221M","Blast",271425,"FJ186554","ZM221M07MAR03PL_55","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186554?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
34,"Blast",31093,"221M","Blast",271424,"FJ186555","ZM221M07MAR03PL_58","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186555?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
35,"Blast",31093,"221M","Blast",271423,"FJ186556","ZM221M07MAR03PL_59","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186556?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
36,"Blast",31093,"221M","Blast",271422,"FJ186557","ZM221M07MAR03PL_6","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186557?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
37,"Blast",31093,"221M","Blast",271421,"FJ186558","ZM221M07MAR03PL_61","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186558?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
38,"Blast",31093,"221M","Blast",271420,"FJ186559","ZM221M07MAR03PL_62","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186559?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
39,"Blast",31093,"221M","Blast",271419,"FJ186560","ZM221M07MAR03PL_64","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186560?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
40,"Blast",31093,"221M","Blast",271418,"FJ186561","ZM221M07MAR03PL_65","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186561?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
41,"Blast",31093,"221M","Blast",271417,"FJ186562","ZM221M07MAR03PL_66","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186562?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
42,"Blast",31093,"221M","Blast",271416,"FJ186563","ZM221M07MAR03PL_67","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186563?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
43,"Blast",31093,"221M","Blast",271415,"FJ186564","ZM221M07MAR03PL_68","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186564?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
44,"Blast",31093,"221M","Blast",271414,"FJ186565","ZM221M07MAR03PL_69","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186565?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
45,"Blast",31093,"221M","Blast",271413,"FJ186566","ZM221M07MAR03PL_72","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186566?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
46,"Blast",31093,"221M","Blast",271412,"FJ186567","ZM221M07MAR03PL_73","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186567?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
47,"Blast",31093,"221M","Blast",271411,"FJ186568","ZM221M07MAR03PL_74","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186568?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
48,"Blast",31093,"221M","Blast",271410,"FJ186569","ZM221M07MAR03PL_75","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186569?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
49,"Blast",31093,"221M","Blast",271409,"FJ186570","ZM221M07MAR03PL_76","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186570?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
50,"Blast",31093,"221M","Blast",271408,"FJ186571","ZM221M07MAR03PL_77","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/FJ186571?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
51,"Blast",31093,"221M","Blast",313699,"FJ606167","ZM1221M","C","ZAMBIA",2005,NA,NA,NA,NA,NA,NA,NA,1476,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/FJ606167?report=graph&log$=seqview",790,2292,"13-Sep-2005"
52,"Blast",31093,"221M","Blast",313584,"FJ606282","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,1509,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/FJ606282?report=graph&log$=seqview",790,2292,"07-Mar-2003"
53,"Blast",31093,"221M","Blast",356180,"HM068598","Z221MPL7MAR03ENV2_1","C","ZAMBIA",2003,NA,NA,NA,NA,NA,31,NA,2592,"HIV-1","6225:8795","http://www.ncbi.nlm.nih.gov/nuccore/HM068598?report=graph&log$=seqview",6225,8795,NA
54,"Blast",31093,"221M","Blast",356179,"HM068599","Z221MPL26FEB05ENV3_1","C","ZAMBIA",2005,NA,NA,NA,NA,NA,731,NA,2580,"HIV-1","6225:8795","http://www.ncbi.nlm.nih.gov/nuccore/HM068599?report=graph&log$=seqview",6225,8795,NA
55,"Blast",31093,"221M","Blast",450682,"HQ858246","ZM221_M_CA_1","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858246?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
56,"Blast",31093,"221M","Blast",450947,"HQ858247","ZM221_M_CA_10","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858247?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
57,"Blast",31093,"221M","Blast",450681,"HQ858248","ZM221_M_CA_14","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858248?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
58,"Blast",31093,"221M","Blast",450946,"HQ858249","ZM221_M_CA_2","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858249?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
59,"Blast",31093,"221M","Blast",450680,"HQ858250","ZM221_M_CA_20","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858250?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
60,"Blast",31093,"221M","Blast",450945,"HQ858251","ZM221_M_CA_21","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858251?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
61,"Blast",31093,"221M","Blast",450679,"HQ858252","ZM221_M_CA_23","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858252?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
62,"Blast",31093,"221M","Blast",450944,"HQ858253","ZM221_M_CF_1","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858253?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
63,"Blast",31093,"221M","Blast",450678,"HQ858254","ZM221_M_CF_11","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858254?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
64,"Blast",31093,"221M","Blast",450943,"HQ858255","ZM221_M_CF_14","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858255?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
65,"Blast",31093,"221M","Blast",450677,"HQ858256","ZM221_M_CF_15","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858256?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
66,"Blast",31093,"221M","Blast",450942,"HQ858257","ZM221_M_CF_19","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858257?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
67,"Blast",31093,"221M","Blast",450676,"HQ858258","ZM221_M_CF_20","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858258?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
68,"Blast",31093,"221M","Blast",450941,"HQ858259","ZM221_M_CF_21","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858259?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
69,"Blast",31093,"221M","Blast",450675,"HQ858260","ZM221_M_CF_21A","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858260?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
70,"Blast",31093,"221M","Blast",450940,"HQ858261","ZM221_M_CF_24","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858261?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
71,"Blast",31093,"221M","Blast",450674,"HQ858262","ZM221_M_CF_24A","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858262?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
72,"Blast",31093,"221M","Blast",450939,"HQ858263","ZM221_M_CF_4","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858263?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
73,"Blast",31093,"221M","Blast",450673,"HQ858264","ZM221_M_CF_6","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858264?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
74,"Blast",31093,"221M","Blast",450938,"HQ858265","ZM221_M_CF_7","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858265?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
75,"Blast",31093,"221M","Blast",450672,"HQ858266","ZM221_M_CF_8","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858266?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
76,"Blast",31093,"221M","Blast",450937,"HQ858267","ZM221_M_CF_9","C","ZAMBIA",2003,NA,NA,NA,NA,NA,0,NA,864,"HIV-1","6608:7478","http://www.ncbi.nlm.nih.gov/nuccore/HQ858267?report=graph&log$=seqview",6608,7478,"07-Mar-2003"
77,"Blast",31093,"221M","Blast",600233,"KM048771","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,1479,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/KM048771?report=graph&log$=seqview",790,2292,"07-Mar-2003"
78,"Blast",31093,"221M","Blast",600232,"KM048772","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,1479,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/KM048772?report=graph&log$=seqview",790,2292,"26-Aug-2003"
79,"Blast",31093,"221M","Blast",600231,"KM048773","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,1479,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/KM048773?report=graph&log$=seqview",790,2292,"28-Feb-2004"
80,"Blast",31093,"221M","Blast",600230,"KM048774","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,1479,"HIV-1","790:2292","http://www.ncbi.nlm.nih.gov/nuccore/KM048774?report=graph&log$=seqview",790,2292,"24-Sep-2004"
81,"Blast",31093,"221M","Blast",599814,"KM049190","ZM1221M","C","ZAMBIA",2005,NA,NA,NA,NA,NA,NA,NA,615,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049190?report=graph&log$=seqview",8797,9417,"13-Sep-2005"
82,"Blast",31093,"221M","Blast",599490,"KM049514","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049514?report=graph&log$=seqview",8797,9417,"07-Mar-2003"
83,"Blast",31093,"221M","Blast",599489,"KM049515","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049515?report=graph&log$=seqview",8797,9417,"26-Aug-2003"
84,"Blast",31093,"221M","Blast",599488,"KM049516","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049516?report=graph&log$=seqview",8797,9417,"28-Feb-2004"
85,"Blast",31093,"221M","Blast",599487,"KM049517","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049517?report=graph&log$=seqview",8797,9417,"24-Sep-2004"
86,"Blast",31093,"221M","Blast",599486,"KM049518","ZM221M","C","ZAMBIA",2005,NA,NA,NA,NA,NA,NA,NA,621,"HIV-1","8797:9417","http://www.ncbi.nlm.nih.gov/nuccore/KM049518?report=graph&log$=seqview",8797,9417,"26-Feb-2005"
87,"Blast",31093,"221M","Blast",598923,"KM050081","ZM1221M","C","ZAMBIA",2005,NA,NA,NA,NA,NA,NA,NA,2997,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050081?report=graph&log$=seqview",2085,5096,"13-Sep-2005"
88,"Blast",31093,"221M","Blast",598603,"KM050401","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050401?report=graph&log$=seqview",2085,5096,"07-Mar-2003"
89,"Blast",31093,"221M","Blast",598602,"KM050402","ZM221M","C","ZAMBIA",2003,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050402?report=graph&log$=seqview",2085,5096,"26-Aug-2003"
90,"Blast",31093,"221M","Blast",598601,"KM050403","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050403?report=graph&log$=seqview",2085,5096,"28-Feb-2004"
91,"Blast",31093,"221M","Blast",598600,"KM050404","ZM221M","C","ZAMBIA",2004,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050404?report=graph&log$=seqview",2085,5096,"24-Sep-2004"
92,"Blast",31093,"221M","Blast",598599,"KM050405","ZM221M","C","ZAMBIA",2005,NA,NA,NA,NA,NA,NA,NA,3006,"HIV-1","2085:5096","http://www.ncbi.nlm.nih.gov/nuccore/KM050405?report=graph&log$=seqview",2085,5096,"26-Feb-2005"


"Source Name","Sample Name","Comment: Original Submitted Sample Name","Protocol REF","Characteristics: Organism","Factor Value: ecotype","Factor Value: Space Flight","Material Type","Parameter Value: duration","Parameter Value: Activation time","Factor Value: light","Parameter Value: Age at harvest","Parameter Value: Sample Storage Method","Parameter Value: Sample Preservation Method",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_Alight_Rep1_GSM2493759","GSM2493759","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_Alight_Rep2_GSM2493760","GSM2493760","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_Alight_Rep3_GSM2493761","GSM2493761","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_dark_Rep1_GSM2493768","GSM2493768","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_dark_Rep2_GSM2493769","GSM2493769","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_GC_dark_Rep3_GSM2493770","GSM2493770","growth protocol","Arabidopsis thaliana ","Col-0 ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_Alight_Rep1_GSM2493762","GSM2493762","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_Alight_Rep2_GSM2493763","GSM2493763","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_Alight_Rep3_GSM2493764","GSM2493764","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_dark_Rep1_GSM2493771","GSM2493771","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_dark_Rep2_GSM2493772","GSM2493772","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_GC_dark_Rep3_GSM2493773","GSM2493773","growth protocol","Arabidopsis thaliana ","Ws ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_Alight_Rep1_GSM2493765","GSM2493765","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_Alight_Rep2_GSM2493766","GSM2493766","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_Alight_Rep3_GSM2493767","GSM2493767","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","4-6 umoles m-2 s-1 total light ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_dark_Rep1_GSM2493774","GSM2493774","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_dark_Rep2_GSM2493775","GSM2493775","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown on the ground, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_GC_dark_Rep3_GSM2493776","GSM2493776","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Ground Control ","root ","11 day"," ","Light-activated for 4 hours, then dark-grown ","11 day","-80C ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_Alight_Rep1_GSM2493777","GSM2493777 ","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_Alight_Rep2_GSM2493778","GSM2493778","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_Alight_Rep3_GSM2493779","GSM2493779","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_dark_Rep1_GSM2493786","GSM2493786","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_dark_Rep2_GSM2493787","GSM2493787","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0_root_FLT_dark_Rep3_GSM2493788","GSM2493788","growth protocol","Arabidopsis thaliana ","Col-0 ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_Alight_Rep1_GSM2493780","GSM2493780","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_Alight_Rep2_GSM2493781","GSM2493781","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_Alight_Rep3_GSM2493782","GSM2493782","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_dark_Rep1_GSM2493789","GSM2493789","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_dark_Rep2_GSM2493790","GSM2493790","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Ws_root_FLT_dark_Rep3_GSM2493791","GSM2493791","growth protocol","Arabidopsis thaliana ","Ws ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_Alight_Rep1_GSM2493783","GSM2493783","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_Alight_Rep2_GSM2493784","GSM2493784","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_Alight_Rep3_GSM2493785","GSM2493785","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","4-6 umoles m-2 s-1 total light ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_dark_Rep1_GSM2493792","GSM2493792","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_dark_Rep2_GSM2493793","GSM2493793","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",
"solid 0.5x MS media plates; grown in spaceflight, 11 day old plant harvested into KFT containing RNAlater fixative","Atha_Col-0-PhyD_root_FLT_dark_Rep3_GSM2493794","GSM2493794","growth protocol","Arabidopsis thaliana ","Col-0 PhyD ","Space Flight ","root ","11 day","12 days after launch ","Light-activated for 4 hours, then dark-grown ","11 day","Minus Eighty-degree Laboratory Freezer for ISS (MELFI) ","RNAlater ",



"","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","geneID","Count"
"GO:0071495","GO:0071495","cellular response to endogenous stimulus","4/14","230/11267",0.000144168599240464,0.052189032925048,0.0140922830966819,"ImpL2/sty/Sesn/Pi3K21B",4
"GO:0071417","GO:0071417","cellular response to organonitrogen compound","3/14","92/11267",0.000179687023153859,0.065046702381697,0.0140922830966819,"ImpL2/Sesn/Pi3K21B",3
"GO:1901699","GO:1901699","cellular response to nitrogen compound","3/14","97/11267",0.000210192604316164,0.0760897227624514,0.0140922830966819,"ImpL2/Sesn/Pi3K21B",3
"GO:0009719","GO:0009719","response to endogenous stimulus","4/14","262/11267",0.000238003003410628,0.0861570872346472,0.0140922830966819,"ImpL2/sty/Sesn/Pi3K21B",4
"GO:1902532","GO:1902532","negative regulation of intracellular signal transduction","3/14","119/11267",0.000384104665425247,0.139045888883939,0.014399637055493,"ImpL2/sty/Sesn",3
"GO:0071310","GO:0071310","cellular response to organic substance","4/14","308/11267",0.000441274746226886,0.159741458134133,0.014399637055493,"ImpL2/sty/Sesn/Pi3K21B",4
"GO:0009968","GO:0009968","negative regulation of signal transduction","4/14","327/11267",0.000553667890133797,0.200427776228435,0.014399637055493,"ImpL2/sty/Sesn/chrb",4
"GO:0007623","GO:0007623","circadian rhythm","3/14","146/11267",0.00069871994137245,0.252936618776827,0.014399637055493,"cwo/Irk1/B4",3
"GO:0010648","GO:0010648","negative regulation of cell communication","4/14","348/11267",0.000700301904635231,0.253509289477954,0.014399637055493,"ImpL2/sty/Sesn/chrb",4
"GO:0023057","GO:0023057","negative regulation of signaling","4/14","349/11267",0.000707910635182445,0.256263649936045,0.014399637055493,"ImpL2/sty/Sesn/chrb",4
"GO:0048511","GO:0048511","rhythmic process","3/14","148/11267",0.000726964767218801,0.263161245733206,0.014399637055493,"cwo/Irk1/B4",3
"GO:1901701","GO:1901701","cellular response to oxygen-containing compound","3/14","151/11267",0.000770687629235254,0.278988921783162,0.014399637055493,"ImpL2/Sesn/Pi3K21B",3
"GO:1902531","GO:1902531","regulation of intracellular signal transduction","4/14","364/11267",0.000829263143682283,0.300193258012986,0.014399637055493,"ImpL2/sty/Sesn/chrb",4
"GO:0010243","GO:0010243","response to organonitrogen compound","3/14","159/11267",0.000895414346250987,0.324139993342857,0.014399637055493,"ImpL2/Sesn/Pi3K21B",3
"GO:0010259","GO:0010259","multicellular organism aging","3/14","165/11267",0.000996942293995659,0.360893110426428,0.014399637055493,"ImpL2/Sesn/Pcyt1",3
"GO:1901698","GO:1901698","response to nitrogen compound","3/14","165/11267",0.000996942293995659,0.360893110426428,0.014399637055493,"ImpL2/Sesn/Pi3K21B",3
"GO:0007568","GO:0007568","aging","3/14","170/11267",0.00108693371303202,0.393470004117592,0.014399637055493,"ImpL2/Sesn/Pcyt1",3
"GO:0048585","GO:0048585","negative regulation of response to stimulus","4/14","392/11267",0.00109437241621747,0.396162814670723,0.014399637055493,"ImpL2/sty/Sesn/chrb",4
"GO:0007169","GO:0007169","transmembrane receptor protein tyrosine kinase signaling pathway","3/14","178/11267",0.0012413933323905,0.449384386325363,0.0151804604970626,"ImpL2/sty/Pi3K21B",3
"GO:0070887","GO:0070887","cellular response to chemical stimulus","4/14","409/11267",0.00128190555308528,0.464049810216873,0.0151804604970626,"ImpL2/sty/Sesn/Pi3K21B",4
"GO:0008286","GO:0008286","insulin receptor signaling pathway","2/14","59/11267",0.00235596267551639,0.852858488536932,0.0265710076186059,"ImpL2/Pi3K21B",2
"GO:0042067","GO:0042067","establishment of ommatidial planar polarity","2/14","61/11267",0.00251624687463364,0.910881368617379,0.0270887821431852,"sty/Pcyt1",2
"GO:0032006","GO:0032006","regulation of TOR signaling","2/14","63/11267",0.00268156417084419,0.970726229845597,0.0276133610269997,"Sesn/chrb",2
"GO:0031929","GO:0031929","TOR signaling","2/14","71/11267",0.00339271838562471,1,0.0311686434556701,"Sesn/chrb",2
"GO:0032869","GO:0032869","cellular response to insulin stimulus","2/14","72/11267",0.00348717896322735,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:0071375","GO:0071375","cellular response to peptide hormone stimulus","2/14","74/11267",0.00367978062336274,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:1901653","GO:1901653","cellular response to peptide","2/14","74/11267",0.00367978062336274,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:0007167","GO:0007167","enzyme linked receptor protein signaling pathway","3/14","262/11267",0.0037417183088027,1,0.0311686434556701,"ImpL2/sty/Pi3K21B",3
"GO:0032868","GO:0032868","response to insulin","2/14","76/11267",0.00387727131132268,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:0043434","GO:0043434","response to peptide hormone","2/14","78/11267",0.0040796291100866,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:1901652","GO:1901652","response to peptide","2/14","78/11267",0.0040796291100866,1,0.0311686434556701,"ImpL2/Pi3K21B",2
"GO:0001558","GO:0001558","regulation of cell growth","2/14","80/11267",0.00428683216818146,1,0.0317281986131852,"Orct2/Sesn",2
"GO:0043549","GO:0043549","regulation of kinase activity","2/14","94/11267",0.0058710990048309,1,0.0410040611733447,"sty/Pi3K21B",2
"GO:0040008","GO:0040008","regulation of growth","3/14","308/11267",0.00588636078177348,1,0.0410040611733447,"Orct2/Sesn/chrb",3
"GO:0006650","GO:0006650","glycerophospholipid metabolic process","2/14","103/11267",0.00701092904709403,1,0.0474423770104107,"Pi3K21B/Pcyt1",2
"GO:0001736","GO:0001736","establishment of planar polarity","2/14","108/11267",0.0076843450476598,1,0.0483500946113679,"sty/Pcyt1",2
"GO:0007164","GO:0007164","establishment of tissue polarity","2/14","108/11267",0.0076843450476598,1,0.0483500946113679,"sty/Pcyt1",2
"GO:0045926","GO:0045926","negative regulation of growth","2/14","109/11267",0.00782243262729355,1,0.0483500946113679,"Sesn/chrb",2
"GO:0051338","GO:0051338","regulation of transferase activity","2/14","110/11267",0.00796164891267191,1,0.0483500946113679,"sty/Pi3K21B",2
"GO:1901700","GO:1901700","response to oxygen-containing compound","3/14","350/11267",0.00838415507414025,1,0.0496430234653041,"ImpL2/Sesn/Pi3K21B",3
"GO:0001738","GO:0001738","morphogenesis of a polarized epithelium","2/14","119/11267",0.00926495936733064,1,0.0535203044325904,"sty/Pcyt1",2
"GO:0032870","GO:0032870","cellular response to hormone stimulus","2/14","122/11267",0.00971934054202051,1,0.0548083113271833,"ImpL2/Pi3K21B",2
"GO:0035220","GO:0035220","wing disc development","3/14","375/11267",0.0101295009611701,1,0.0557928449513654,"sty/Irk1/Pcyt1",3
"GO:0006979","GO:0006979","response to oxidative stress","2/14","133/11267",0.0114692134158178,1,0.0575960379631344,"Sesn/chrb",2
"GO:0015695","GO:0015695","organic cation transport","1/14","10/11267",0.0123613291420243,1,0.0575960379631344,"Orct2",1
"GO:0040036","GO:0040036","regulation of fibroblast growth factor receptor signaling pathway","1/14","10/11267",0.0123613291420243,1,0.0575960379631344,"sty",1
"GO:0042594","GO:0042594","response to starvation","2/14","141/11267",0.0128231604495584,1,0.0575960379631344,"ImpL2/Sesn",2
"GO:0046486","GO:0046486","glycerolipid metabolic process","2/14","141/11267",0.0128231604495584,1,0.0575960379631344,"Pi3K21B/Pcyt1",2
"GO:0006644","GO:0006644","phospholipid metabolic process","2/14","142/11267",0.0129971432433162,1,0.0575960379631344,"Pi3K21B/Pcyt1",2
"GO:0010888","GO:0010888","negative regulation of lipid storage","1/14","11/11267",0.0135896263252887,1,0.0575960379631344,"ImpL2",1
"GO:0071230","GO:0071230","cellular response to amino acid stimulus","1/14","11/11267",0.0135896263252887,1,0.0575960379631344,"Sesn",1
"GO:0071901","GO:0071901","negative regulation of protein serine/threonine kinase activity","1/14","11/11267",0.0135896263252887,1,0.0575960379631344,"sty",1
"GO:1905953","GO:1905953","negative regulation of lipid localization","1/14","11/11267",0.0135896263252887,1,0.0575960379631344,"ImpL2",1
"GO:0016049","GO:0016049","cell growth","2/14","151/11267",0.0146097138536656,1,0.0575960379631344,"Orct2/Sesn",2
"GO:0045314","GO:0045314","regulation of compound eye photoreceptor development","1/14","12/11267",0.0148165048995114,1,0.0575960379631344,"sty",1
"GO:1902882","GO:1902882","regulation of response to oxidative stress","1/14","12/11267",0.0148165048995114,1,0.0575960379631344,"Sesn",1
"GO:0009725","GO:0009725","response to hormone","2/14","154/11267",0.0151657359480122,1,0.0575960379631344,"ImpL2/Pi3K21B",2
"GO:0040007","GO:0040007","growth","3/14","437/11267",0.0153304380781681,1,0.0575960379631344,"Orct2/Sesn/chrb",3
"GO:0042478","GO:0042478","regulation of eye photoreceptor cell development","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"sty",1
"GO:0046628","GO:0046628","positive regulation of insulin receptor signaling pathway","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"ImpL2",1
"GO:0048581","GO:0048581","negative regulation of post-embryonic development","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"sty",1
"GO:0048747","GO:0048747","muscle fiber development","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"sty",1
"GO:1900078","GO:1900078","positive regulation of cellular response to insulin stimulus","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"ImpL2",1
"GO:2000377","GO:2000377","regulation of reactive oxygen species metabolic process","1/14","13/11267",0.0160419663772017,1,0.0575960379631344,"Sesn",1
"GO:0031667","GO:0031667","response to nutrient levels","2/14","161/11267",0.016498549818279,1,0.0575960379631344,"ImpL2/Sesn",2
"GO:0008340","GO:0008340","determination of adult lifespan","2/14","162/11267",0.0166929653417545,1,0.0575960379631344,"ImpL2/Pcyt1",2
"GO:0009991","GO:0009991","response to extracellular stimulus","2/14","163/11267",0.0168883770258819,1,0.0575960379631344,"ImpL2/Sesn",2
"GO:0014066","GO:0014066","regulation of phosphatidylinositol 3-kinase signaling","1/14","14/11267",0.0172660122693929,1,0.0575960379631344,"ImpL2",1
"GO:0034198","GO:0034198","cellular response to amino acid starvation","1/14","14/11267",0.0172660122693929,1,0.0575960379631344,"Sesn",1
"GO:0043200","GO:0043200","response to amino acid","1/14","14/11267",0.0172660122693929,1,0.0575960379631344,"Sesn",1
"GO:1904262","GO:1904262","negative regulation of TORC1 signaling","1/14","14/11267",0.0172660122693929,1,0.0575960379631344,"Sesn",1
"GO:0008069","GO:0008069","dorsal/ventral axis specification, ovarian follicular epithelium","1/14","15/11267",0.0184886440856397,1,0.0598234825985515,"sty",1
"GO:1990928","GO:1990928","response to amino acid starvation","1/14","15/11267",0.0184886440856397,1,0.0598234825985515,"Sesn",1
"GO:0001700","GO:0001700","embryonic development via the syncytial blastoderm","2/14","172/11267",0.0186915147852363,1,0.0598234825985515,"Orct2/chrb",2
"GO:0016239","GO:0016239","positive regulation of macroautophagy","1/14","16/11267",0.0197098633340222,1,0.060625006837389,"Sesn",1
"GO:0046580","GO:0046580","negative regulation of Ras protein signal transduction","1/14","16/11267",0.0197098633340222,1,0.060625006837389,"sty",1
"GO:0071229","GO:0071229","cellular response to acid chemical","1/14","16/11267",0.0197098633340222,1,0.060625006837389,"Sesn",1
"GO:0051058","GO:0051058","negative regulation of small GTPase mediated signal transduction","1/14","17/11267",0.0209296715211456,1,0.0635516341735189,"sty",1
"GO:0014065","GO:0014065","phosphatidylinositol 3-kinase signaling","1/14","18/11267",0.0221480701521418,1,0.0655699445293672,"ImpL2",1
"GO:0035171","GO:0035171","lamellocyte differentiation","1/14","18/11267",0.0221480701521418,1,0.0655699445293672,"sty",1
"GO:0030308","GO:0030308","negative regulation of cell growth","1/14","19/11267",0.0233650607306704,1,0.0668502409730968,"Sesn",1
"GO:0070593","GO:0070593","dendrite self-avoidance","1/14","19/11267",0.0233650607306704,1,0.0668502409730968,"ImpL2",1
"GO:0009792","GO:0009792","embryo development ending in birth or egg hatching","2/14","194/11267",0.0234272955587941,1,0.0668502409730968,"Orct2/chrb",2
"GO:0007390","GO:0007390","germ-band shortening","1/14","21/11267",0.0257948237376161,1,0.0710383762663846,"Orct2",1
"GO:0048015","GO:0048015","phosphatidylinositol-mediated signaling","1/14","21/11267",0.0257948237376161,1,0.0710383762663846,"ImpL2",1
"GO:0048017","GO:0048017","inositol lipid-mediated signaling","1/14","21/11267",0.0257948237376161,1,0.0710383762663846,"ImpL2",1
"GO:0046627","GO:0046627","negative regulation of insulin receptor signaling pathway","1/14","22/11267",0.0270075991660059,1,0.0726043059906701,"ImpL2",1
"GO:1900077","GO:1900077","negative regulation of cellular response to insulin stimulus","1/14","22/11267",0.0270075991660059,1,0.0726043059906701,"ImpL2",1
"GO:0007163","GO:0007163","establishment or maintenance of cell polarity","2/14","214/11267",0.0281201488440231,1,0.0726043059906701,"sty/Pcyt1",2
"GO:0006469","GO:0006469","negative regulation of protein kinase activity","1/14","23/11267",0.0282189725418773,1,0.0726043059906701,"sty",1
"GO:0046854","GO:0046854","phosphatidylinositol phosphorylation","1/14","23/11267",0.0282189725418773,1,0.0726043059906701,"Pi3K21B",1
"GO:1905330","GO:1905330","regulation of morphogenesis of an epithelium","1/14","23/11267",0.0282189725418773,1,0.0726043059906701,"sty",1
"GO:0032007","GO:0032007","negative regulation of TOR signaling","1/14","24/11267",0.0294289453615516,1,0.0726043059906701,"Sesn",1
"GO:0033673","GO:0033673","negative regulation of kinase activity","1/14","24/11267",0.0294289453615516,1,0.0726043059906701,"sty",1
"GO:0048580","GO:0048580","regulation of post-embryonic development","1/14","24/11267",0.0294289453615516,1,0.0726043059906701,"sty",1
"GO:0090288","GO:0090288","negative regulation of cellular response to growth factor stimulus","1/14","24/11267",0.0294289453615516,1,0.0726043059906701,"sty",1
"GO:0018108","GO:0018108","peptidyl-tyrosine phosphorylation","1/14","25/11267",0.0306375191198847,1,0.074105477204461,"Ptpmeg2",1
"GO:0018212","GO:0018212","peptidyl-tyrosine modification","1/14","26/11267",0.0318446953102706,1,0.074105477204461,"Ptpmeg2",1
"GO:0051348","GO:0051348","negative regulation of transferase activity","1/14","26/11267",0.0318446953102706,1,0.074105477204461,"sty",1
"GO:0001101","GO:0001101","response to acid chemical","1/14","27/11267",0.0330504754246426,1,0.074105477204461,"Sesn",1
"GO:0016241","GO:0016241","regulation of macroautophagy","1/14","27/11267",0.0330504754246426,1,0.074105477204461,"Sesn",1
"GO:0040018","GO:0040018","positive regulation of multicellular organism growth","1/14","27/11267",0.0330504754246426,1,0.074105477204461,"Orct2",1
"GO:0042387","GO:0042387","plasmatocyte differentiation","1/14","27/11267",0.0330504754246426,1,0.074105477204461,"sty",1
"GO:0043405","GO:0043405","regulation of MAP kinase activity","1/14","27/11267",0.0330504754246426,1,0.074105477204461,"sty",1
"GO:0000302","GO:0000302","response to reactive oxygen species","1/14","28/11267",0.034254860953473,1,0.074105477204461,"Sesn",1
"GO:0008293","GO:0008293","torso signaling pathway","1/14","28/11267",0.034254860953473,1,0.074105477204461,"sty",1
"GO:0035168","GO:0035168","larval lymph gland hemocyte differentiation","1/14","28/11267",0.034254860953473,1,0.074105477204461,"sty",1
"GO:0046834","GO:0046834","lipid phosphorylation","1/14","28/11267",0.034254860953473,1,0.074105477204461,"Pi3K21B",1
"GO:0048598","GO:0048598","embryonic morphogenesis","2/14","239/11267",0.0344770870397404,1,0.074105477204461,"Orct2/chrb",2
"GO:0042325","GO:0042325","regulation of phosphorylation","2/14","240/11267",0.0347422729428165,1,0.074105477204461,"sty/Pi3K21B",2
"GO:0016334","GO:0016334","establishment or maintenance of polarity of follicular epithelium","1/14","29/11267",0.0354578533857762,1,0.074105477204461,"sty",1
"GO:0042059","GO:0042059","negative regulation of epidermal growth factor receptor signaling pathway","1/14","29/11267",0.0354578533857762,1,0.074105477204461,"sty",1
"GO:1901185","GO:1901185","negative regulation of ERBB signaling pathway","1/14","29/11267",0.0354578533857762,1,0.074105477204461,"sty",1
"GO:0000422","GO:0000422","autophagy of mitochondrion","1/14","30/11267",0.0366594542091078,1,0.074105477204461,"Sesn",1
"GO:0016318","GO:0016318","ommatidial rotation","1/14","30/11267",0.0366594542091078,1,0.074105477204461,"sty",1
"GO:0061726","GO:0061726","mitochondrion disassembly","1/14","30/11267",0.0366594542091078,1,0.074105477204461,"Sesn",1
"GO:0008543","GO:0008543","fibroblast growth factor receptor signaling pathway","1/14","31/11267",0.0378596649095679,1,0.074105477204461,"sty",1
"GO:0010508","GO:0010508","positive regulation of autophagy","1/14","31/11267",0.0378596649095679,1,0.074105477204461,"Sesn",1
"GO:0044344","GO:0044344","cellular response to fibroblast growth factor stimulus","1/14","31/11267",0.0378596649095679,1,0.074105477204461,"sty",1
"GO:0071774","GO:0071774","response to fibroblast growth factor","1/14","31/11267",0.0378596649095679,1,0.074105477204461,"sty",1
"GO:0110111","GO:0110111","negative regulation of animal organ morphogenesis","1/14","31/11267",0.0378596649095679,1,0.074105477204461,"sty",1
"GO:0050767","GO:0050767","regulation of neurogenesis","2/14","253/11267",0.0382635188799991,1,0.0742820685763572,"sty/cwo",2
"GO:0021782","GO:0021782","glial cell development","1/14","35/11267",0.0426466361538071,1,0.079531646370548,"sty",1
"GO:0043409","GO:0043409","negative regulation of MAPK cascade","1/14","35/11267",0.0426466361538071,1,0.079531646370548,"sty",1
"GO:0046626","GO:0046626","regulation of insulin receptor signaling pathway","1/14","35/11267",0.0426466361538071,1,0.079531646370548,"ImpL2",1
"GO:0110116","GO:0110116","regulation of compound eye photoreceptor cell differentiation","1/14","35/11267",0.0426466361538071,1,0.079531646370548,"sty",1
"GO:1900076","GO:1900076","regulation of cellular response to insulin stimulus","1/14","35/11267",0.0426466361538071,1,0.079531646370548,"ImpL2",1
"GO:0007476","GO:0007476","imaginal disc-derived wing morphogenesis","2/14","270/11267",0.043069598327523,1,0.0796929245369463,"sty/Pcyt1",2
"GO:1903008","GO:1903008","organelle disassembly","1/14","37/11267",0.0450318195704926,1,0.0816969890213095,"Sesn",1
"GO:0019220","GO:0019220","regulation of phosphate metabolic process","2/14","279/11267",0.0457032571024999,1,0.0816969890213095,"sty/Pi3K21B",2
"GO:0051174","GO:0051174","regulation of phosphorus metabolic process","2/14","279/11267",0.0457032571024999,1,0.0816969890213095,"sty/Pi3K21B",2
"GO:0007472","GO:0007472","wing disc morphogenesis","2/14","280/11267",0.0459996093773915,1,0.0816969890213095,"sty/Pcyt1",2
"GO:0008258","GO:0008258","head involution","1/14","38/11267",0.046222340899612,1,0.0816969890213095,"chrb",1
"GO:0072593","GO:0072593","reactive oxygen species metabolic process","1/14","38/11267",0.046222340899612,1,0.0816969890213095,"Sesn",1
"GO:1903432","GO:1903432","regulation of TORC1 signaling","1/14","40/11267",0.0485992501718929,1,0.0852618424068297,"Sesn",1
"GO:0010001","GO:0010001","glial cell differentiation","1/14","41/11267",0.0497856410597163,1,0.0860681462807235,"sty",1
"GO:0010883","GO:0010883","regulation of lipid storage","1/14","41/11267",0.0497856410597163,1,0.0860681462807235,"ImpL2",1
"GO:0001745","GO:0001745","compound eye morphogenesis","2/14","300/11267",0.052078867333788,1,0.0869882735741494,"sty/Pcyt1",2
"GO:0042058","GO:0042058","regulation of epidermal growth factor receptor signaling pathway","1/14","43/11267",0.0521543026895678,1,0.0869882735741494,"sty",1
"GO:0070372","GO:0070372","regulation of ERK1 and ERK2 cascade","1/14","43/11267",0.0521543026895678,1,0.0869882735741494,"sty",1
"GO:1901184","GO:1901184","regulation of ERBB signaling pathway","1/14","43/11267",0.0521543026895678,1,0.0869882735741494,"sty",1
"GO:1901607","GO:1901607","alpha-amino acid biosynthetic process","1/14","43/11267",0.0521543026895678,1,0.0869882735741494,"CG1673",1
"GO:0038202","GO:0038202","TORC1 signaling","1/14","44/11267",0.0533365763676098,1,0.087470382426654,"Sesn",1
"GO:0046532","GO:0046532","regulation of photoreceptor cell differentiation","1/14","44/11267",0.0533365763676098,1,0.087470382426654,"sty",1
"GO:0030307","GO:0030307","positive regulation of cell growth","1/14","45/11267",0.0545174805760084,1,0.087470382426654,"Orct2",1
"GO:0007156","GO:0007156","homophilic cell adhesion via plasma membrane adhesion molecules","1/14","46/11267",0.055697016779175,1,0.087470382426654,"ImpL2",1
"GO:0070371","GO:0070371","ERK1 and ERK2 cascade","1/14","46/11267",0.055697016779175,1,0.087470382426654,"sty",1
"GO:0048592","GO:0048592","eye morphogenesis","2/14","313/11267",0.0561811080665412,1,0.087470382426654,"sty/Pcyt1",2
"GO:0090596","GO:0090596","sensory organ morphogenesis","2/14","313/11267",0.0561811080665412,1,0.087470382426654,"sty/Pcyt1",2
"GO:0008652","GO:0008652","cellular amino acid biosynthetic process","1/14","47/11267",0.0568751864400866,1,0.087470382426654,"CG1673",1
"GO:0019216","GO:0019216","regulation of lipid metabolic process","1/14","47/11267",0.0568751864400866,1,0.087470382426654,"Pi3K21B",1
"GO:0040014","GO:0040014","regulation of multicellular organism growth","1/14","47/11267",0.0568751864400866,1,0.087470382426654,"Orct2",1
"GO:0097164","GO:0097164","ammonium ion metabolic process","1/14","47/11267",0.0568751864400866,1,0.087470382426654,"Pcyt1",1
"GO:1905952","GO:1905952","regulation of lipid localization","1/14","47/11267",0.0568751864400866,1,0.087470382426654,"ImpL2",1
"GO:0035120","GO:0035120","post-embryonic appendage morphogenesis","2/14","317/11267",0.0574664197136079,1,0.0878094698510138,"sty/Pcyt1",2
"GO:0006812","GO:0006812","cation transport","2/14","323/11267",0.0594143201217026,1,0.0894685275807134,"Orct2/Irk1",2
"GO:0030707","GO:0030707","ovarian follicle cell development","2/14","324/11267",0.059741271659064,1,0.0894685275807134,"sty/Ptpmeg2",2
"GO:0002066","GO:0002066","columnar/cuboidal epithelial cell development","2/14","325/11267",0.0600688757880269,1,0.0894685275807134,"sty/Ptpmeg2",2
"GO:0035114","GO:0035114","imaginal disc-derived appendage morphogenesis","2/14","326/11267",0.0603971306512419,1,0.0894685275807134,"sty/Pcyt1",2
"GO:0035107","GO:0035107","appendage morphogenesis","2/14","329/11267",0.0613857811181092,1,0.0894685275807134,"sty/Pcyt1",2
"GO:0016333","GO:0016333","morphogenesis of follicular epithelium","1/14","51/11267",0.0615742288705488,1,0.0894685275807134,"sty",1
"GO:0035264","GO:0035264","multicellular organism growth","1/14","51/11267",0.0615742288705488,1,0.0894685275807134,"Orct2",1
"GO:0042386","GO:0042386","hemocyte differentiation","1/14","51/11267",0.0615742288705488,1,0.0894685275807134,"sty",1
"GO:0060284","GO:0060284","regulation of cell development","2/14","331/11267",0.0620481011847157,1,0.0895228740380707,"sty/cwo",2
"GO:0048737","GO:0048737","imaginal disc-derived appendage development","2/14","333/11267",0.0627129798676787,1,0.0895228740380707,"sty/Pcyt1",2
"GO:0006813","GO:0006813","potassium ion transport","1/14","52/11267",0.0627455877146833,1,0.0895228740380707,"Irk1",1
"GO:0090287","GO:0090287","regulation of cellular response to growth factor stimulus","1/14","53/11267",0.0639155887643486,1,0.0896202725294627,"sty",1
"GO:0048736","GO:0048736","appendage development","2/14","338/11267",0.0643862743105905,1,0.0896202725294627,"sty/Pcyt1",2
"GO:0002065","GO:0002065","columnar/cuboidal epithelial cell differentiation","2/14","340/11267",0.0650599928696488,1,0.0896202725294627,"sty/Ptpmeg2",2
"GO:0019915","GO:0019915","lipid storage","1/14","54/11267",0.0650842334725076,1,0.0896202725294627,"ImpL2",1
"GO:0035166","GO:0035166","post-embryonic hemopoiesis","1/14","54/11267",0.0650842334725076,1,0.0896202725294627,"sty",1
"GO:0035167","GO:0035167","larval lymph gland hemopoiesis","1/14","54/11267",0.0650842334725076,1,0.0896202725294627,"sty",1
"GO:0050790","GO:0050790","regulation of catalytic activity","2/14","344/11267",0.066414894336461,1,0.0909239502628763,"sty/Pi3K21B",2
"GO:0046474","GO:0046474","glycerophospholipid biosynthetic process","1/14","56/11267",0.0674174596690379,1,0.0917660521810861,"Pcyt1",1
"GO:0051960","GO:0051960","regulation of nervous system development","2/14","351/11267",0.0688096194796859,1,0.0931258007995749,"sty/cwo",2
"GO:0007474","GO:0007474","imaginal disc-derived wing vein specification","1/14","58/11267",0.0697452778994978,1,0.093271397415489,"sty",1
"GO:0071900","GO:0071900","regulation of protein serine/threonine kinase activity","1/14","58/11267",0.0697452778994978,1,0.093271397415489,"sty",1
"GO:0007422","GO:0007422","peripheral nervous system development","1/14","59/11267",0.0709071626447392,1,0.093271397415489,"cwo",1
"GO:0002064","GO:0002064","epithelial cell development","2/14","360/11267",0.071931918893462,1,0.093271397415489,"sty/Ptpmeg2",2
"GO:0001763","GO:0001763","morphogenesis of a branching structure","1/14","60/11267",0.0720676997363678,1,0.093271397415489,"sty",1
"GO:0048754","GO:0048754","branching morphogenesis of an epithelial tube","1/14","60/11267",0.0720676997363678,1,0.093271397415489,"sty",1
"GO:0060446","GO:0060446","branching involved in open tracheal system development","1/14","60/11267",0.0720676997363678,1,0.093271397415489,"sty",1
"GO:0061138","GO:0061138","morphogenesis of a branching epithelium","1/14","60/11267",0.0720676997363678,1,0.093271397415489,"sty",1
"GO:0007173","GO:0007173","epidermal growth factor receptor signaling pathway","1/14","61/11267",0.0732268906173966,1,0.0937470861389146,"sty",1
"GO:0038127","GO:0038127","ERBB signaling pathway","1/14","61/11267",0.0732268906173966,1,0.0937470861389146,"sty",1
"GO:0055002","GO:0055002","striated muscle cell development","1/14","62/11267",0.0743847367294223,1,0.0947174067013017,"sty",1
"GO:0055001","GO:0055001","muscle cell development","1/14","63/11267",0.075541239512625,1,0.0956756481302597,"sty",1
"GO:0048749","GO:0048749","compound eye development","2/14","373/11267",0.0765256040487225,1,0.0961107774508421,"sty/Pcyt1",2
"GO:0001933","GO:0001933","negative regulation of protein phosphorylation","1/14","64/11267",0.076696400405772,1,0.0961107774508421,"sty",1
"GO:0048542","GO:0048542","lymph gland development","1/14","65/11267",0.0778502208462184,1,0.0970432115811587,"sty",1
"GO:0042326","GO:0042326","negative regulation of phosphorylation","1/14","66/11267",0.0790027022699067,1,0.0979642216077653,"sty",1
"GO:0044255","GO:0044255","cellular lipid metabolic process","2/14","385/11267",0.0808507788226588,1,0.0997336909818982,"Pi3K21B/Pcyt1",2
"GO:0045017","GO:0045017","glycerolipid biosynthetic process","1/14","68/11267",0.0813036538037297,1,0.0997726866966959,"Pcyt1",1
"GO:0007560","GO:0007560","imaginal disc morphogenesis","2/14","389/11267",0.0823100777143402,1,0.0998567254080907,"sty/Pcyt1",2
"GO:0048563","GO:0048563","post-embryonic animal organ morphogenesis","2/14","389/11267",0.0823100777143402,1,0.0998567254080907,"sty/Pcyt1",2
"GO:0045475","GO:0045475","locomotor rhythm","1/14","70/11267",0.0835992664666046,1,0.0998567254080907,"Irk1",1
"GO:0001654","GO:0001654","eye development","2/14","395/11267",0.084515131987002,1,0.0998567254080907,"sty/Pcyt1",2
"GO:0048880","GO:0048880","sensory system development","2/14","395/11267",0.084515131987002,1,0.0998567254080907,"sty/Pcyt1",2
"GO:0150063","GO:0150063","visual system development","2/14","395/11267",0.084515131987002,1,0.0998567254080907,"sty/Pcyt1",2
"GO:0008654","GO:0008654","phospholipid biosynthetic process","1/14","71/11267",0.0847450742963329,1,0.0998567254080907,"Pcyt1",1
"GO:0042391","GO:0042391","regulation of membrane potential","1/14","71/11267",0.0847450742963329,1,0.0998567254080907,"Irk1",1
"GO:0098742","GO:0098742","cell-cell adhesion via plasma-membrane adhesion molecules","1/14","73/11267",0.0870327000898757,1,0.102044593643679,"ImpL2",1
"GO:0030855","GO:0030855","epithelial cell differentiation","2/14","413/11267",0.0912429260111377,1,0.106290814067552,"sty/Ptpmeg2",2
"GO:0009950","GO:0009950","dorsal/ventral axis specification","1/14","77/11267",0.0915920320950336,1,0.106290814067552,"sty",1
"GO:0065009","GO:0065009","regulation of molecular function","2/14","415/11267",0.0920006046206922,1,0.106290814067552,"sty/Pi3K21B",2
"GO:0045595","GO:0045595","regulation of cell differentiation","2/14","418/11267",0.0931408345579486,1,0.1069244680246,"sty/cwo",2
"GO:0009267","GO:0009267","cellular response to starvation","1/14","79/11267",0.0938637610458449,1,0.1069244680246,"Sesn",1
"GO:0006468","GO:0006468","protein phosphorylation","2/14","420/11267",0.0939034439184932,1,0.1069244680246,"sty/Ptpmeg2",2
"GO:0010563","GO:0010563","negative regulation of phosphorus metabolic process","1/14","80/11267",0.0949976462215114,1,0.107140202505464,"sty",1
"GO:0045936","GO:0045936","negative regulation of phosphate metabolic process","1/14","80/11267",0.0949976462215114,1,0.107140202505464,"sty",1
"GO:0042752","GO:0042752","regulation of circadian rhythm","1/14","81/11267",0.0961302137510459,1,0.107394727378279,"cwo",1
"GO:0046488","GO:0046488","phosphatidylinositol metabolic process","1/14","81/11267",0.0961302137510459,1,0.107394727378279,"Pi3K21B",1
"GO:0016236","GO:0016236","macroautophagy","1/14","82/11267",0.0972614650479783,1,0.108148404426959,"Sesn",1
"GO:0031669","GO:0031669","cellular response to nutrient levels","1/14","83/11267",0.0983914015244494,1,0.108893582602071,"Sesn",1
"GO:0031331","GO:0031331","positive regulation of cellular catabolic process","1/14","84/11267",0.0995200245912103,1,0.10912283398159,"Sesn",1
"GO:0042063","GO:0042063","gliogenesis","1/14","84/11267",0.0995200245912103,1,0.10912283398159,"sty",1
"GO:0031668","GO:0031668","cellular response to extracellular stimulus","1/14","85/11267",0.100647335657626,1,0.109570076315173,"Sesn",1
"GO:0048707","GO:0048707","instar larval or pupal morphogenesis","2/14","438/11267",0.100853168021655,1,0.109570076315173,"sty/Pcyt1",2
"GO:0048667","GO:0048667","cell morphogenesis involved in neuron differentiation","2/14","444/11267",0.103203265522903,1,0.111304440331494,"ImpL2/cwo",2
"GO:0031400","GO:0031400","negative regulation of protein modification process","1/14","88/11267",0.104021410927647,1,0.111304440331494,"sty",1
"GO:0043086","GO:0043086","negative regulation of catalytic activity","1/14","88/11267",0.104021410927647,1,0.111304440331494,"sty",1
"GO:0009886","GO:0009886","post-embryonic animal morphogenesis","2/14","450/11267",0.105569570550431,1,0.111304440331494,"sty/Pcyt1",2
"GO:0048812","GO:0048812","neuron projection morphogenesis","2/14","451/11267",0.105965507424624,1,0.111304440331494,"ImpL2/cwo",2
"GO:0042051","GO:0042051","compound eye photoreceptor development","1/14","90/11267",0.106264260215271,1,0.111304440331494,"sty",1
"GO:0045859","GO:0045859","regulation of protein kinase activity","1/14","90/11267",0.106264260215271,1,0.111304440331494,"sty",1
"GO:0120039","GO:0120039","plasma membrane bounded cell projection morphogenesis","2/14","452/11267",0.106361883903285,1,0.111304440331494,"ImpL2/cwo",2
"GO:0048858","GO:0048858","cell projection morphogenesis","2/14","454/11267",0.107155949662286,1,0.111304440331494,"ImpL2/cwo",2
"GO:0071496","GO:0071496","cellular response to external stimulus","1/14","91/11267",0.1073837287987,1,0.111304440331494,"Sesn",1
"GO:0010506","GO:0010506","regulation of autophagy","1/14","92/11267",0.10850189520858,1,0.111304440331494,"Sesn",1
"GO:0048569","GO:0048569","post-embryonic animal organ development","2/14","459/11267",0.109148702201428,1,0.111304440331494,"sty/Pcyt1",2
"GO:0030258","GO:0030258","lipid modification","1/14","93/11267",0.109618760843218,1,0.111304440331494,"Pi3K21B",1
"GO:2000027","GO:2000027","regulation of animal organ morphogenesis","1/14","93/11267",0.109618760843218,1,0.111304440331494,"sty",1
"GO:0060562","GO:0060562","epithelial tube morphogenesis","2/14","461/11267",0.109948807167025,1,0.111304440331494,"sty/Pcyt1",2
"GO:0042462","GO:0042462","eye photoreceptor cell development","1/14","94/11267",0.110734327099545,1,0.111304440331494,"sty",1
"GO:0032990","GO:0032990","cell part morphogenesis","2/14","463/11267",0.110750610869827,1,0.111304440331494,"ImpL2/cwo",2
"GO:0007552","GO:0007552","metamorphosis","2/14","465/11267",0.111554101495189,1,0.111304440331494,"sty/Pcyt1",2
"GO:0046578","GO:0046578","regulation of Ras protein signal transduction","1/14","95/11267",0.111848595373115,1,0.111304440331494,"sty",1
"GO:0071363","GO:0071363","cellular response to growth factor stimulus","1/14","95/11267",0.111848595373115,1,0.111304440331494,"sty",1
"GO:0048639","GO:0048639","positive regulation of developmental growth","1/14","96/11267",0.112961567058111,1,0.111475230649452,"Orct2",1
"GO:0070848","GO:0070848","response to growth factor","1/14","96/11267",0.112961567058111,1,0.111475230649452,"sty",1
"GO:0019637","GO:0019637","organophosphate metabolic process","2/14","477/11267",0.116409814080878,1,0.114401433361859,"Pi3K21B/Pcyt1",2
"GO:0031175","GO:0031175","neuron projection development","2/14","479/11267",0.117224785736278,1,0.114425453945371,"ImpL2/cwo",2
"GO:0009896","GO:0009896","positive regulation of catabolic process","1/14","100/11267",0.117400515747951,1,0.114425453945371,"Sesn",1
"GO:0007423","GO:0007423","sensory organ development","2/14","487/11267",0.12050049652664,1,0.116333891924234,"sty/Pcyt1",2
"GO:0051056","GO:0051056","regulation of small GTPase mediated signal transduction","1/14","103/11267",0.120716181196232,1,0.116333891924234,"sty",1
"GO:0006629","GO:0006629","lipid metabolic process","2/14","488/11267",0.120911717081089,1,0.116333891924234,"Pi3K21B/Pcyt1",2
"GO:0000904","GO:0000904","cell morphogenesis involved in differentiation","2/14","489/11267",0.121323323288985,1,0.116333891924234,"ImpL2/cwo",2
"GO:0048512","GO:0048512","circadian behavior","1/14","104/11267",0.121818830198673,1,0.116338016955439,"Irk1",1
"GO:0051235","GO:0051235","maintenance of location","1/14","105/11267",0.12292019509854,1,0.116918384684725,"ImpL2",1
"GO:0007622","GO:0007622","rhythmic behavior","1/14","106/11267",0.124020277276342,1,0.117024795081472,"Irk1",1
"GO:0008361","GO:0008361","regulation of cell size","1/14","106/11267",0.124020277276342,1,0.117024795081472,"Pi3K21B",1
"GO:0006811","GO:0006811","ion transport","2/14","498/11267",0.125044901564486,1,0.117447741206928,"Orct2/Irk1",2
"GO:0035239","GO:0035239","tube morphogenesis","2/14","499/11267",0.125460287107045,1,0.117447741206928,"sty/Pcyt1",2
"GO:0030097","GO:0030097","hemopoiesis","1/14","108/11267",0.126216598980978,1,0.11769057095201,"sty",1
"GO:0042461","GO:0042461","photoreceptor cell development","1/14","111/11267",0.129501495556971,1,0.1202800268331,"sty",1
"GO:0051146","GO:0051146","striated muscle cell differentiation","1/14","112/11267",0.130593910316939,1,0.120820846304734,"sty",1
"GO:0044092","GO:0044092","negative regulation of molecular function","1/14","114/11267",0.132774921916919,1,0.122360669388928,"sty",1
"GO:0008038","GO:0008038","neuron recognition","1/14","115/11267",0.133863521494895,1,0.122885729646476,"ImpL2",1
"GO:0002520","GO:0002520","immune system development","1/14","119/11267",0.138205243539976,1,0.125413106660595,"sty",1
"GO:0045927","GO:0045927","positive regulation of growth","1/14","119/11267",0.138205243539976,1,0.125413106660595,"Orct2",1
"GO:0048534","GO:0048534","hematopoietic or lymphoid organ development","1/14","119/11267",0.138205243539976,1,0.125413106660595,"sty",1
"GO:0008037","GO:0008037","cell recognition","1/14","120/11267",0.139287511802484,1,0.125912776840333,"ImpL2",1
"GO:0007298","GO:0007298","border follicle cell migration","1/14","121/11267",0.140368517887956,1,0.126407510605524,"Ptpmeg2",1
"GO:0042692","GO:0042692","muscle cell differentiation","1/14","126/11267",0.145754663173825,1,0.129757769263629,"sty",1
"GO:0010876","GO:0010876","lipid localization","1/14","127/11267",0.146828124686756,1,0.129757769263629,"ImpL2",1
"GO:0043408","GO:0043408","regulation of MAPK cascade","1/14","127/11267",0.146828124686756,1,0.129757769263629,"sty",1
"GO:0098609","GO:0098609","cell-cell adhesion","1/14","127/11267",0.146828124686756,1,0.129757769263629,"ImpL2",1
"GO:1901605","GO:1901605","alpha-amino acid metabolic process","1/14","127/11267",0.146828124686756,1,0.129757769263629,"CG1673",1
"GO:0007297","GO:0007297","ovarian follicle cell migration","1/14","133/11267",0.153242634398622,1,0.134923078613539,"Ptpmeg2",1
"GO:0006470","GO:0006470","protein dephosphorylation","1/14","134/11267",0.154307355354112,1,0.135357329257993,"Ptpmeg2",1
"GO:0022411","GO:0022411","cellular component disassembly","1/14","140/11267",0.160669619188679,1,0.140418195057109,"Sesn",1
"GO:0000165","GO:0000165","MAPK cascade","1/14","146/11267",0.166987413783612,1,0.145403127327061,"sty",1
"GO:0023014","GO:0023014","signal transduction by protein phosphorylation","1/14","150/11267",0.171174713544012,1,0.148503221698102,"sty",1
"GO:0016053","GO:0016053","organic acid biosynthetic process","1/14","152/11267",0.173261026203314,1,0.149220022567447,"CG1673",1
"GO:0046394","GO:0046394","carboxylic acid biosynthetic process","1/14","152/11267",0.173261026203314,1,0.149220022567447,"CG1673",1
"GO:0009953","GO:0009953","dorsal/ventral pattern formation","1/14","153/11267",0.174302352845972,1,0.149572957247688,"sty",1
"GO:0002164","GO:0002164","larval development","1/14","160/11267",0.18155760791426,1,0.155236411859048,"sty",1
"GO:0007219","GO:0007219","Notch signaling pathway","1/14","161/11267",0.18258922702736,1,0.155556895422779,"cwo",1
"GO:0048813","GO:0048813","dendrite morphogenesis","1/14","164/11267",0.185676844285842,1,0.15736399786598,"cwo",1
"GO:0006914","GO:0006914","autophagy","1/14","165/11267",0.18670364102366,1,0.15736399786598,"Sesn",1
"GO:0061919","GO:0061919","process utilizing autophagic mechanism","1/14","165/11267",0.18670364102366,1,0.15736399786598,"Sesn",1
"GO:0007265","GO:0007265","Ras protein signal transduction","1/14","167/11267",0.188753628784703,1,0.158527683749751,"sty",1
"GO:0010631","GO:0010631","epithelial cell migration","1/14","168/11267",0.189776822406056,1,0.158823823847359,"Ptpmeg2",1
"GO:0090132","GO:0090132","epithelium migration","1/14","169/11267",0.190798817584569,1,0.159116879008628,"Ptpmeg2",1
"GO:0045664","GO:0045664","regulation of neuron differentiation","1/14","173/11267",0.19487483976791,1,0.161655763735408,"sty",1
"GO:0016358","GO:0016358","dendrite development","1/14","174/11267",0.195890862144262,1,0.161655763735408,"cwo",1
"GO:0032535","GO:0032535","regulation of cellular component size","1/14","174/11267",0.195890862144262,1,0.161655763735408,"Pi3K21B",1
"GO:0015672","GO:0015672","monovalent inorganic cation transport","1/14","175/11267",0.196905693833614,1,0.161929024534222,"Irk1",1
"GO:0001751","GO:0001751","compound eye photoreceptor cell differentiation","1/14","177/11267",0.19893179030267,1,0.162466979376047,"sty",1
"GO:0090130","GO:0090130","tissue migration","1/14","177/11267",0.19893179030267,1,0.162466979376047,"Ptpmeg2",1
"GO:0031329","GO:0031329","regulation of cellular catabolic process","1/14","178/11267",0.199943057654858,1,0.162731734390823,"Sesn",1
"GO:0001754","GO:0001754","eye photoreceptor cell differentiation","1/14","183/11267",0.204981636927332,1,0.16626124119917,"sty",1
"GO:0007264","GO:0007264","small GTPase mediated signal transduction","1/14","186/11267",0.207990624575552,1,0.168126066209805,"sty",1
"GO:0007626","GO:0007626","locomotory behavior","1/14","188/11267",0.209990737649426,1,0.168480699119344,"Irk1",1
"GO:0001667","GO:0001667","ameboidal-type cell migration","1/14","190/11267",0.211986159647494,1,0.168480699119344,"Ptpmeg2",1
"GO:0006520","GO:0006520","cellular amino acid metabolic process","1/14","190/11267",0.211986159647494,1,0.168480699119344,"CG1673",1
"GO:0006897","GO:0006897","endocytosis","1/14","190/11267",0.211986159647494,1,0.168480699119344,"Pcyt1",1
"GO:0048732","GO:0048732","gland development","1/14","190/11267",0.211986159647494,1,0.168480699119344,"sty",1
"GO:0009798","GO:0009798","axis specification","1/14","191/11267",0.212982114668252,1,0.168706128499759,"sty",1
"GO:0000122","GO:0000122","negative regulation of transcription by RNA polymerase II","1/14","193/11267",0.214970519092486,1,0.169149735253749,"cwo",1
"GO:0032269","GO:0032269","negative regulation of cellular protein metabolic process","1/14","193/11267",0.214970519092486,1,0.169149735253749,"sty",1
"GO:0051248","GO:0051248","negative regulation of protein metabolic process","1/14","194/11267",0.215962971027894,1,0.169367962639513,"sty",1
"GO:0030001","GO:0030001","metal ion transport","1/14","196/11267",0.217944380665689,1,0.170357775403092,"Irk1",1
"GO:0016311","GO:0016311","dephosphorylation","1/14","199/11267",0.220907778463371,1,0.172106129343001,"Ptpmeg2",1
"GO:0009894","GO:0009894","regulation of catabolic process","1/14","200/11267",0.221893258324368,1,0.172307103099164,"Sesn",1
"GO:0007155","GO:0007155","cell adhesion","1/14","204/11267",0.225823614243862,1,0.174216743373458,"ImpL2",1
"GO:0046530","GO:0046530","photoreceptor cell differentiation","1/14","204/11267",0.225823614243862,1,0.174216743373458,"sty",1
"GO:0022610","GO:0022610","biological adhesion","1/14","206/11267",0.227781871632733,1,0.175156941617788,"ImpL2",1
"GO:0007005","GO:0007005","mitochondrion organization","1/14","212/11267",0.233629081428075,1,0.178494204826203,"Sesn",1
"GO:0051241","GO:0051241","negative regulation of multicellular organismal process","1/14","212/11267",0.233629081428075,1,0.178494204826203,"sty",1
"GO:0001932","GO:0001932","regulation of protein phosphorylation","1/14","216/11267",0.237504352178813,1,0.180291765317925,"sty",1
"GO:0051093","GO:0051093","negative regulation of developmental process","1/14","216/11267",0.237504352178813,1,0.180291765317925,"sty",1
"GO:0008610","GO:0008610","lipid biosynthetic process","1/14","220/11267",0.241361420164708,1,0.182634335083434,"Pcyt1",1
"GO:0098657","GO:0098657","import into cell","1/14","225/11267",0.246157277758764,1,0.1856700888224,"Pcyt1",1
"GO:0048638","GO:0048638","regulation of developmental growth","1/14","228/11267",0.249021263339165,1,0.187234032585838,"Orct2",1
"GO:0042127","GO:0042127","regulation of cell proliferation","1/14","230/11267",0.250924970388525,1,0.187475073343577,"Pi3K21B",1
"GO:0061061","GO:0061061","muscle structure development","1/14","230/11267",0.250924970388525,1,0.187475073343577,"sty",1
"GO:0090407","GO:0090407","organophosphate biosynthetic process","1/14","234/11267",0.254718948392814,1,0.189711232665949,"Pcyt1",1
"GO:0007424","GO:0007424","open tracheal system development","1/14","237/11267",0.257552713624889,1,0.191220460536545,"sty",1
"GO:0090066","GO:0090066","regulation of anatomical structure size","1/14","245/11267",0.265060582214833,1,0.195647828842211,"Pi3K21B",1
"GO:0022603","GO:0022603","regulation of anatomical structure morphogenesis","1/14","246/11267",0.26599409263481,1,0.195647828842211,"sty",1
"GO:0060541","GO:0060541","respiratory system development","1/14","246/11267",0.26599409263481,1,0.195647828842211,"sty",1
"GO:0051094","GO:0051094","positive regulation of developmental process","1/14","253/11267",0.272497900790681,1,0.19981107276488,"Orct2",1
"GO:0044283","GO:0044283","small molecule biosynthetic process","1/14","257/11267",0.276190295386823,1,0.201893490779841,"CG1673",1
"GO:0051240","GO:0051240","positive regulation of multicellular organismal process","1/14","261/11267",0.279865281744782,1,0.203950407749234,"Orct2",1
"GO:0080134","GO:0080134","regulation of response to stress","1/14","265/11267",0.283522935651961,1,0.205982113405526,"Sesn",1
"GO:0007411","GO:0007411","axon guidance","1/14","273/11267",0.290786547751903,1,0.210613144195005,"ImpL2",1
"GO:0006915","GO:0006915","apoptotic process","1/14","278/11267",0.295291518869658,1,0.21322397864465,"chrb",1
"GO:0097485","GO:0097485","neuron projection guidance","1/14","282/11267",0.298876348352847,1,0.215156545766727,"ImpL2",1
"GO:0006935","GO:0006935","chemotaxis","1/14","292/11267",0.307764473331933,1,0.220883593300431,"ImpL2",1
"GO:0016477","GO:0016477","cell migration","1/14","305/11267",0.319162648238305,1,0.228372065045694,"Ptpmeg2",1
"GO:0031399","GO:0031399","regulation of protein modification process","1/14","321/11267",0.332951910631831,1,0.237521179112752,"sty",1
"GO:0007409","GO:0007409","axonogenesis","1/14","333/11267",0.343123176097986,1,0.244042088263148,"ImpL2",1
"GO:0012501","GO:0012501","programmed cell death","1/14","345/11267",0.35315026918554,1,0.250260385443153,"chrb",1
"GO:0061564","GO:0061564","axon development","1/14","346/11267",0.353979411854593,1,0.250260385443153,"ImpL2",1
"GO:0018193","GO:0018193","peptidyl-amino acid modification","1/14","350/11267",0.357286123529097,1,0.251846421660548,"Ptpmeg2",1
"GO:0042330","GO:0042330","taxis","1/14","353/11267",0.35975583564079,1,0.252834805619796,"ImpL2",1
"GO:0009967","GO:0009967","positive regulation of signal transduction","1/14","355/11267",0.36139741150861,1,0.253062459020568,"ImpL2",1
"GO:0048870","GO:0048870","cell motility","1/14","356/11267",0.36221673301144,1,0.253062459020568,"Ptpmeg2",1
"GO:0008283","GO:0008283","cell proliferation","1/14","359/11267",0.364668844689964,1,0.254026285000749,"Pi3K21B",1
"GO:0051674","GO:0051674","localization of cell","1/14","361/11267",0.366298719174314,1,0.254413371860536,"Ptpmeg2",1
"GO:0048589","GO:0048589","developmental growth","1/14","364/11267",0.368736252347485,1,0.255357515476098,"Orct2",1
"GO:0045892","GO:0045892","negative regulation of transcription, DNA-templated","1/14","381/11267",0.382385285254623,1,0.262507060815531,"cwo",1
"GO:1902679","GO:1902679","negative regulation of RNA biosynthetic process","1/14","381/11267",0.382385285254623,1,0.262507060815531,"cwo",1
"GO:1903507","GO:1903507","negative regulation of nucleic acid-templated transcription","1/14","381/11267",0.382385285254623,1,0.262507060815531,"cwo",1
"GO:0008219","GO:0008219","cell death","1/14","385/11267",0.385556744881203,1,0.26347785680777,"chrb",1
"GO:0010647","GO:0010647","positive regulation of cell communication","1/14","387/11267",0.387136797602883,1,0.26347785680777,"ImpL2",1
"GO:0023056","GO:0023056","positive regulation of signaling","1/14","387/11267",0.387136797602883,1,0.26347785680777,"ImpL2",1
"GO:0051253","GO:0051253","negative regulation of RNA metabolic process","1/14","399/11267",0.396538158855531,1,0.269102958053067,"cwo",1
"GO:0019752","GO:0019752","carboxylic acid metabolic process","1/14","415/11267",0.408865070183416,1,0.276675611402311,"CG1673",1
"GO:0045934","GO:0045934","negative regulation of nucleobase-containing compound metabolic process","1/14","421/11267",0.413427070716491,1,0.278965634761465,"cwo",1
"GO:0043436","GO:0043436","oxoacid metabolic process","1/14","430/11267",0.420208808228705,1,0.282736189747185,"CG1673",1
"GO:0006082","GO:0006082","organic acid metabolic process","1/14","432/11267",0.421705939840281,1,0.282939724061617,"CG1673",1
"GO:0032879","GO:0032879","regulation of localization","1/14","442/11267",0.429137900530271,1,0.287112779123732,"ImpL2",1
"GO:0010558","GO:0010558","negative regulation of macromolecule biosynthetic process","1/14","446/11267",0.432085773750794,1,0.287460967161232,"cwo",1
"GO:2000113","GO:2000113","negative regulation of cellular macromolecule biosynthetic process","1/14","446/11267",0.432085773750794,1,0.287460967161232,"cwo",1
"GO:0048584","GO:0048584","positive regulation of response to stimulus","1/14","456/11267",0.43939372945221,1,0.290358988184465,"ImpL2",1
"GO:0009890","GO:0009890","negative regulation of biosynthetic process","1/14","457/11267",0.440119701868052,1,0.290358988184465,"cwo",1
"GO:0031327","GO:0031327","negative regulation of cellular biosynthetic process","1/14","457/11267",0.440119701868052,1,0.290358988184465,"cwo",1
"GO:0002376","GO:0002376","immune system process","1/14","464/11267",0.445177117663017,1,0.292879682673038,"sty",1
"GO:0003002","GO:0003002","regionalization","1/14","467/11267",0.447331568024791,1,0.293481856846706,"sty",1
"GO:0016192","GO:0016192","vesicle-mediated transport","1/14","498/11267",0.46914389447358,1,0.306942065299667,"Pcyt1",1


Disease,ICD10code,ICD10codeDescr,Category
Lower Respiratory Tract Infections,A06.5,Amoebic lung abscess,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A15,"Respiratory tuberculosis, bacteriologically and histologically confirmed",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A16,"Respiratory tuberculosis, not confirmed bacteriologically or histologically",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A20.2,Pneumonic plague,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A21.2,Pulmonary tularaemia,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A22.1,Pulmonary Anthrax,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A31.0,Pulmonary mycobacterial infection,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A37,Whooping cough,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A42.0,Pulmonary actinomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,A43.0,Pulmonary nocardiosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B01.2,Varicella pneumonia,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B05.2,Measles complicated by pneumonia,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B25.0,Cytomegaloviral pneumonitis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B37.1,Pulmonary candidiasis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B38.0,Acute pulmonary coccidioidomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B38.1,Chronic pulmonary coccidioidomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B38.2,"Pulmonary coccidioidomycosis, unspecified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B39.0,Acute pulmonary histoplasmosis capsulati,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B39.1,Chronic pulmonary histoplasmosis capsulati,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B39.2,"Pulmonary histoplasmosis capsulati, unspecified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B40.0,Acute pulmonary blastomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B40.1,Chronic pulmonary blastomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B40.2,"Pulmonary blastomycosis, unspecified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B41.0,Pulmonary paracoccidioidomycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B42.0,Pulmonary sporotrichosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B44.0,Invasive pulmonary aspergillosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B44.1,Other pulmonary aspergillosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B45.0,Pulmonary cryptococcosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B46.0,Pulmonary mucormycosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B58.3,Pulmonary toxoplasmosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B59,Pneumocystosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,B67.1,Echinococcus granulosus infection of lung,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J10.0,"Influenza with pneumonia, other influenza virus identified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J11.0,"Influenza with pneumonia, virus not identified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J12,"Viral pneumonia, not elsewhere classified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J13,Pneumonia due to Streptococcus pneumoniae,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J14,Pneumonia due to Haemophilus influenzae,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J15,"Bacterial pneumonia, not elsewhere classified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J16,"Pneumonia due to other infectious organisms, not elsewhere classified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J17,Pneumonia in diseases classified elsewhere,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J18,"Pneumonia, organism unspecified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J20,Acute bronchitis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J21,Acute bronchiolitis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J22,Unspecified acute lower respiratory infection,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J44.0,Chronic obstructive pulmonary disease with acute lower respiratory infection,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J44.1,"Chronic obstructive pulmonary disease with acute exacerbation, unspecified",Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J65,Pneumoconiosis associated with tuberculosis,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J85.0,Gangrene and necrosis of lung,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J85.1,Abscess of lung with pneumonia,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J85.2,Abscess of lung without pneumonia,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,J86,Pyothorax,Diagnosis of Lower Respiratory Tract Infections
Lower Respiratory Tract Infections,P23,Congenital pneumonia,Diagnosis of Lower Respiratory Tract Infections


Panther ID,Gene ID,PANTHER Family/Subfamily,PANTHER Protein Class,GO Database MF Complete,GO Database BP Complete,GO Database CC Complete,,
ARATH|TAIR=locus=2135129|UniProtKB=O65638,AT4G36010,PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN (PTHR31048:SF125),-,molecular_function,defense response,extracellular region; anchored component of membrane,,
ARATH|TAIR=locus=2046006|UniProtKB=Q9SIU5,AT2G20670,EXPRESSED PROTEIN (PTHR31579:SF37),-,-,-,nucleus; chloroplast,,
ARATH|TAIR=locus=2091762|UniProtKB=Q9LV52,AT3G24520,HEAT STRESS TRANSCRIPTION FACTOR C-1 (PTHR10015:SF332),winged helix/forkhead transcription factor,RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity; protein binding,regulation of transcription by RNA polymerase II; cellular response to heat,nucleus; host cell nucleus,,
ARATH|TAIR=locus=2079691|UniProtKB=Q9SRT1,AT3G07350,F21O3.6 PROTEIN (PTHR31579:SF44),-,-,cellular response to hypoxia,mitochondrion,,
ARATH|TAIR=locus=2097870|UniProtKB=Q9SB04,AT3G48100,TWO-COMPONENT RESPONSE REGULATOR ARR5 (PTHR43874:SF94),winged helix/forkhead transcription factor,phosphorelay response regulator activity; protein binding,regulation of transcription; DNA-templated; circadian rhythm; response to cytokinin; cytokinin-activated signaling pathway,nucleus; cytoplasm,,
ARATH|TAIR=locus=2031210|UniProtKB=Q9FPE8,AT1G25550,TRANSCRIPTION FACTOR HHO3 (PTHR31003:SF24),-,DNA binding;  DNA-binding transcription factor activity,regulation of transcription; DNA-templated; cellular response to hypoxia,nucleus; mitochondrion,,
ARATH|TAIR=locus=2182187|UniProtKB=Q93VG3,AT5G19120,BASIC 7S GLOBULIN 2 SMALL SUBUNIT (PTHR47965:SF46),-,aspartic-type endopeptidase activity,cellular response to hypoxia,extracellular region,,
ARATH|TAIR=locus=2065058|UniProtKB=Q9XEE6,AT2G40140,ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 (PTHR14493:SF86),-,DNA-binding transcription factor activity; protein binding,regulation of transcription; DNA-templated; response to cold; response to chitin; defense response to fungus; cellular response to hypoxia,nucleus,,
ARATH|TAIR=locus=2206885|UniProtKB=Q9FX43,AT1G73500,SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED (PTHR24361:SF769),-,protein serine/threonine kinase activity; MAP kinase kinase activity; protein binding; protein kinase activator activity,response to wounding; response to fungus; response to salt stress; ethylene biosynthetic process; ethylene-activated signaling pathway; camalexin biosynthetic process; leaf senescence; positive regulation of transcription; DNA-templated; protein autophosphorylation; cellular response to hypoxia,mitochondrion,,
ARATH|TAIR=locus=2115060|UniProtKB=O23160,AT4G37260,TRANSCRIPTION FACTOR MYB73 (PTHR45614:SF124),-,transcription regulatory region sequence-specific DNA binding; RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity;  RNA polymerase II-specific; DNA-binding transcription factor activity; protein binding,regulation of transcription; DNA-templated; response to chitin; positive regulation of auxin mediated signaling pathway; glucosinolate metabolic process; negative regulation of response to salt stress,nucleus,,
ARATH|TAIR=locus=2151591|UniProtKB=Q9FKG1,AT5G61600,ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF104 (PTHR31677:SF50),-,DNA-binding transcription factor activity;protein binding,phloem or xylem histogenesis; positive regulation of transcription; DNA-templated; defense response to fungus; cell division,nucleus,,
ARATH|TAIR=locus=2035843|UniProtKB=Q9XI67,AT1G14200,RING/U-BOX SUPERFAMILY PROTEIN (PTHR15710:SF45),-,ubiquitin protein ligase activity,defense response; incompatible interaction; protein ubiquitination; cellular response to hypoxia,nucleus; cytoplasm,,
ARATH|TAIR=locus=2088100|UniProtKB=Q9LTT7,AT3G13310,CHAPERONE PROTEIN DNAJ 11; CHLOROPLASTIC-LIKE (PTHR44240:SF17),-,-,cellular response to hypoxia,chloroplast,,
ARATH|TAIR=locus=2031220|UniProtKB=Q9C6L0,AT1G25400,BNAANNG41370D PROTEIN (PTHR36715:SF1),-,molecular_function,biological_process,nucleus,,
ARATH|TAIR=locus=2170862|UniProtKB=P33077,AT5G43700,AUXIN-RESPONSIVE PROTEIN IAA4 (PTHR31734:SF188),-,transcription regulatory region sequence-specific DNA binding;DNA binding;DNA-binding transcription factor activity; protein binding; identical protein binding,regulation of transcription; DNA-templated; response to auxin,nucleus,,
ARATH|TAIR=locus=2137599|UniProtKB=P46604,AT4G37790,HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22 (PTHR45714:SF14),-,transcription regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity; RNA polymerase II-specific; DNA-binding transcription factor activity; protein binding,response to water deprivation; response to cytokinin; response to abscisic acid; abscisic acid-activated signaling pathway,nucleus,,
ARATH|TAIR=locus=2120056|UniProtKB=Q6EJ98,AT4G37610,BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 5 (PTHR46287:SF9),-,calmodulin binding,regulation of transcription; DNA-templated; response to cold; response to auxin; response to salicylic acid; response to chitin; protein ubiquitination; response to hydrogen peroxide,nucleus; cytoplasm,,
ARATH|TAIR=locus=2205319|UniProtKB=Q9ZWM9,AT1G13260,AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR RAV1 (PTHR31140:SF76),-,transcription regulatory region sequence-specific DNA binding; DNA binding; DNA-binding transcription factor activity,response to brassinosteroid; negative regulation of flower development; negative regulation of transcription; DNA-templated; leaf development; lateral root development; cellular response to hypoxia,nucleus,,
ARATH|TAIR=locus=2121974|UniProtKB=Q9SB52,AT4G24570,MITOCHONDRIAL DICARBOXYLATE CARRIER (PTHR45618:SF13),-,dicarboxylic acid transmembrane transporter activity; ATP transmembrane transporter activity; sulfate transmembrane transporter activity; thiosulfate transmembrane transporter activity; oxaloacetate transmembrane transporter activity; malate transmembrane transporter activity; succinate transmembrane transporter activity,mitochondrial transport; sulfate transport; thiosulfate transport; oxaloacetate transport; phosphate ion transmembrane transport; succinate transmembrane transport; malate transmembrane transport; cellular response to hypoxia,mitochondrion,,
ARATH|TAIR=locus=2102340|UniProtKB=Q9LI84,AT3G25600,CALCIUM-BINDING PROTEIN CML16-RELATED (PTHR23050:SF362),calmodulin-related,calcium ion binding; enzyme regulator activity,microtubule cytoskeleton organization; calcium-mediated signaling,nucleus,,
ARATH|TAIR=locus=2082068|UniProtKB=Q93ZS9,AT3G55980,ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 47 (PTHR14493:SF115),-,DNA-binding transcription factor activity,regulation of transcription; DNA-templated; response to chitin; cellular response to hypoxia,nucleus,,
ARATH|TAIR=locus=2205025|UniProtKB=Q9C9L7,AT1G69760,BNACNNG70820D PROTEIN (PTHR34539:SF3),-,molecular_function,biological_process,nucleus,,
ARATH|TAIR=locus=2101135|UniProtKB=Q94BN0,AT3G48360,BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 2 (PTHR46287:SF4),-,protein binding; calmodulin binding,regulation of transcription; DNA-templated; circadian rhythm; response to cold; embryo sac development; pollen development; response to wounding; response to salt stress; response to auxin; auxin-activated signaling pathway; response to abscisic acid; abscisic acid-activated signaling pathway; response to carbohydrate; response to salicylic acid; response to jasmonic acid; response to nitrate; sugar mediated signaling pathway; protein ubiquitination; response to hydrogen peroxide; positive regulation of telomerase activity,nucleus; cytoplasm,,
ARATH|TAIR=locus=2150823|UniProtKB=Q9FTA0,AT5G08350,GEM-LIKE PROTEIN 4 (PTHR31969:SF38),-,molecular_function,biological_process,cellular_component,,
ARATH|TAIR=locus=2129061|UniProtKB=P46600,AT4G17460,HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1 (PTHR45714:SF20),-,DNA-binding transcription factor activity; RNA polymerase II-specific; DNA-binding transcription factor activity; protein binding; protein self-association,developmental process involved in reproduction; floral meristem determinacy; gynoecium development; meristem development; fruit septum development,nucleus,,
ARATH|TAIR=locus=2098802|UniProtKB=Q940V4,AT3G30180,CYTOCHROME P450 85A2 (PTHR24286:SF245),oxygenase,monooxygenase activity; iron ion binding; oxidoreductase activity; oxidoreductase activity; acting on paired donors; with incorporation or reduction of molecular oxygen; heme binding,multicellular organism development; brassinosteroid homeostasis; sterol metabolic process; brassinosteroid biosynthetic process; oxidation-reduction process,mitochondrion,,
ARATH|TAIR=locus=2128429|UniProtKB=Q9SUQ2,AT4G23750,ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 (PTHR31194:SF140),-,DNA-binding transcription factor activity; protein binding; identical protein binding,regulation of transcription; DNA-templated; root development; cotyledon development,nucleus,,
ARATH|TAIR=locus=2011751|UniProtKB=Q9C9J8,AT1G76600,POLY POLYMERASE (PTHR33052:SF87),-,molecular_function,response to fungus; cellular response to hypoxia,nucleus; nucleolus,,
ARATH|TAIR=locus=2115145|UniProtKB=Q8LE56,AT4G37240,HTH-TYPE TRANSCRIPTIONAL REGULATOR (PTHR33052:SF73),-,molecular_function,response to fungus,cellular_component,,
ARATH|TAIR=locus=2059883|UniProtKB=Q42379,AT2G16720,TRANSCRIPTION FACTOR MYB7 (PTHR47999:SF3),-,DNA-binding transcription factor activity; protein binding,regulation of flavonol biosynthetic process,nucleus,,
ARATH|TAIR=locus=2120071|UniProtKB=Q9SZE8,AT4G37540,LOB DOMAIN-CONTAINING PROTEIN 39 (PTHR31304:SF50),-,-,regulation of gene expression,cellular_component,,
ARATH|TAIR=locus=2091747|UniProtKB=Q9LV58,AT3G24500,MULTIPROTEIN-BRIDGING FACTOR 1C (PTHR10245:SF71),-,DNA-binding transcription factor activity; transcription coactivator activity,response to heat; response to water deprivation; response to abscisic acid; ethylene-activated signaling pathway; positive regulation of transcription; DNA-templated; cellular response to hypoxia,intracellular; nucleus; nucleolus,,
ARATH|TAIR=locus=2083063|UniProtKB=Q9SN23,AT3G49940,LOB DOMAIN-CONTAINING PROTEIN 38 (PTHR31304:SF1),-,protein binding,regulation of gene expression,mitochondrion,,
ARATH|TAIR=locus=2158480|UniProtKB=Q9FH76,AT5G45340,ABSCISIC ACID 8'-HYDROXYLASE 3 (PTHR24286:SF10),oxygenase,monooxygenase activity; iron ion binding; (+)-abscisic acid 8'-hydroxylase activity; oxidoreductase activity; oxidoreductase activity; acting on paired donors; with incorporation or reduction of molecular oxygen; NAD(P)H as one donor; and incorporation of one atom of oxygen; heme binding,response to water deprivation; response to red or far red light; abscisic acid metabolic process; sterol metabolic process; abscisic acid catabolic process; oxidation-reduction process; cellular response to hypoxia,extracellular region; chloroplast,,
ARATH|TAIR=locus=2174497|UniProtKB=Q38857,AT5G57560,XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 22 (PTHR31062:SF188),-,hydrolase activity; hydrolyzing O-glycosyl compounds; xyloglucan:xyloglucosyl transferase activity,response to heat; response to cold; response to mechanical stimulus; plant-type cell wall organization; response to auxin; response to brassinosteroid; xyloglucan metabolic process; cell wall biogenesis; cellular response to hypoxia,cell wall; golgi apparatus; chloroplast; secretory vesicle,,
ARATH|TAIR=locus=2091186|UniProtKB=Q9LJM6,AT3G19680,BNAC05G33040D PROTEIN (PTHR31317:SF16),-,-,-,plasma membrane; plastid,,
ARATH|TAIR=locus=2138753|UniProtKB=Q9ZPE7,AT4G08950,PROTEIN EXORDIUM-RELATED (PTHR31279:SF54),-,molecular_function,response to brassinosteroid,extracellular region; cell wall; golgi appartus; plant-type cell wall,,
ARATH|TAIR=locus=2128298|UniProtKB=Q9SAR0,AT4G11280,1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 6 (PTHR43795:SF6),transaminase,protein binding; 1-aminocyclopropane-1-carboxylate synthase activity; pyridoxal phosphate binding; identical protein binding,response to oxidative stress; response to wounding; response to mechanical stimulus; ethylene biosynthetic process; response to ethylene; response to auxin; response to jasmonic acid; phloem or xylem histogenesis; cell division,cytoplasm,,
ARATH|TAIR=locus=2151576|UniProtKB=Q9FKG2,AT5G61590,ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF107 (PTHR31677:SF74),-,transcription regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity,regulation of transcription; DNA-templated; response to water deprivation; glucosinolate metabolic process; positive regulation of transcription; DNA-templated; negative regulation of wax biosynthetic process,nucleus,,
ARATH|TAIR=locus=2031185|UniProtKB=Q9C6M5,AT1G25560,AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR TEM1 (PTHR31140:SF1),-,DNA binding; DNA-binding transcription factor activity; protein binding,regulation of transcription; DNA-templated; ethylene-activated signaling pathway; photoperiodism; flowering; cellular response to hypoxia,nucleus,,
ARATH|TAIR=locus=2153504|UniProtKB=O82132,AT5G05410,DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED (PTHR31241:SF37),-,transcription regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity; protein binding; sequence-specific DNA binding,regulation of transcription; DNA-templated; response to stress; response to heat; response to water deprivation; response to UV-B; heat acclimation; response to hydrogen peroxide; positive regulation of transcription; DNA-templated; cellular response to hypoxia,nucleus,,
ARATH|TAIR=locus=2125043|UniProtKB=O04609,AT4G01250,DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) FAMILY-RELATED (PTHR32096:SF61),-,transcription regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity; sequence-specific DNA binding,regulation of transcription; DNA-templated; leaf senescence; response to chitin; cellular response to hypoxia,nucleus,,
,AT3G30720,QUA-QUINE STARCH,,protein binding,innate immune response; negative regulation of starch metabolic process; positive regulation of protein metabolic process; starch biosynthetic process,cytosol; mitochondrion; nucleus,,
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Disease,ICD10code,ICD10codeDescr,Category
Other or unspecified infectious organisms,A08.5,Other specified intestinal infections,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A09,Other gastroenteritis and colitis of infectious and unspecified origin,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A41.8,Other specified sepsis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A41.9,"Sepsis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A63.8,Other specified predominantly sexually transmitted diseases,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A64,Unspecified sexually transmitted disease,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A81.0,Creutzfeldt-Jakob disease,Diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A81.8,Other atypical virus infections of central nervous system,Diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,A81.9,"Atypical virus infection of central nervous system, unspecified",Diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,B94.8,Sequelae of other specified infectious and parasitic diseases,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,B94.9,Sequelae of unspecified infectious or parasitic disease,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,B99,Other and unspecified infectious diseases,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G02.8,Meningitis in other specified infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G04.8,"Other encephalitis, myelitis and encephalomyelitis",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G04.9,"Encephalitis, myelitis and encephalomyelitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G05.2,"Encephalitis, myelitis and encephalomyelitis in other infectious and parasitic diseases classified elsewhere",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G06,Intracranial and intraspinal abscess and granuloma,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G07,Intracranial and intraspinal abscess and granuloma in diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G08,Intracranial and intraspinal phlebitis and thrombophlebitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G53.1,Multiple cranial nerve palsies in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G63.0,Polyneuropathy in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,G94.0,Hydrocephalus in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H10,Conjunctivitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H13.1,Conjunctivitis in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H19.2,Keratitis and keratoconjunctivitis in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H60,Otitis externa,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H62.3,Otitis externa in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H62.4,Otitis externa in other diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H65,Nonsuppurative otitis media,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H66,Suppurative and unspecified otitis media,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H67.8,Otitis media in other diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H70,Mastoiditis and related conditions,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H73.0,Acute myringitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H73.1,Chronic myringitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,H75.0,Mastoiditis in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I30.1,Infective pericarditis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I32.1,Pericarditis in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I33.0,Acute and subacute infective endocarditis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I40.0,Infective myocarditis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I41.2,Myocarditis in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I43.0,Cardiomyopathy in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,I98.1,Cardiovascular disorders in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J00,Acute nasopharyngitis [common cold],Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J01,Acute sinusitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J02.8,Acute pharyngitis due to other specified organisms,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J02.9,"Acute pharyngitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J03.8,Acute tonsillitis due to other specified organisms,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J03.9,"Acute tonsillitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J04,Acute laryngitis and tracheitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J05,Acute obstructive laryngitis [croup] and epiglottitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J06,Acute upper respiratory infections of multiple and unspecified sites,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J16.8,Pneumonia due to other specified infectious organisms,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J17.8,Pneumonia in other diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J18,"Pneumonia, organism unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J20.8,Acute bronchitis due to other specified organisms,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J20.9,"Acute bronchitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J22,Unspecified acute lower respiratory infection,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J44.0,Chronic obstructive pulmonary disease with acute lower respiratory infection,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J44.1,"Chronic obstructive pulmonary disease with acute exacerbation, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,J85,Abscess of lung and mediastinum,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,K75.0,Abscess of liver,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,K77.0,Liver disorders in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,L08.0,Pyoderma,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,L08.8,Other specified local infections of skin and subcutaneous tissue,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,L08.9,"Local infection of skin and subcutaneous tissue, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,L30.3,Infective dermatitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M01.8,Arthritis in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M02,Reactive arthropathies,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M03,Postinfective and reactive arthropathies in diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M46.3,Infection of intervertebral disc (pyogenic),Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M46.4,"Discitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M46.5,Other infective spondylopathies,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M49.3,Spondylopathy in other infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M60.0,Infective myositis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,M63.2,Myositis in other infectious diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N08.0,Glomerular disorders in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N10,Acute tubulo-interstitial nephritis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N16.0,Renal tubulo-interstitial disorders in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N29.1,Other disorders of kidney and ureter in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N30.0,Acute cystitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N30.8,Other cystitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N30.9,"Cystitis, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N34,Urethritis and urethral syndrome,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N48.1,Balanoposthitis,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N77.0,Ulceration of vulva in infectious and parasitic diseases classified elsewhere,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,N77.1,"Vaginitis, vulvitis and vulvovaginitis in infectious and parasitic diseases classified elsewhere",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,P23.8,Congenital pneumonia due to other organisms,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,P23.9,"Congenital pneumonia, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,P37.8,Other specified congenital infectious and parasitic diseases,Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,P37.9,"Congenital infectious and parasitic disease, unspecified",Possible diagnosis of Other or unspecified infectious organisms
Other or unspecified infectious organisms,P39,Other infections specific to the perinatal period,Possible diagnosis of Other or unspecified infectious organisms


ID,Barcode,LName,FName,DOB,Location,sampType,sampID,sampDate,sampSource,sampSeq,reportLab,reportDate,comments,organism,requestor,requestorContact,lineageNum,lineageName
12345678,BARCODE,Jones,Douglas,1890-01-01,Oxford,Sputum,ABDH615D!,1916-12-25; 15:33,Pulmonary,MGIT Cultured Isolate,Oxford,1917-01-03,No words needed,Doppelganglius Bob,Dr. Requestor Name,req_contact@genome.com,2.2.1,East-Asian Beijing
23456789,BARCODE,Cole,Gordon,1862-12-12,Cambridge,Sputum,ABD7895715,1916-12-26; 14:22,Pulmonary,MGIT Cultured Isolate,Oxford,1917-01-06,I'm worried about coup,Mycobacterium tuberculosis,Dr. Requestor Name,req_contact@genome.com,2.2.1,East-Asian Beijing
34567890,BARCODE,Evans,Diane,1887-04-04,London,Sputum,917BAHDYB1,1916-12-30; 18:45,Pulmonary,MGIT Cultured Isolate,Oxford,1917-01-09,No additional comments,Mycobacterium tuberculosis,Dr. Requestor Name,req_contact@genome.com,2.2.1,East-Asian Beijing
45678901,BARCODE,Brennan,Andy,1877-05-26,London,Sputum,10DBFH162784,1917-01-01' 08:30,Pulmonary,MGIT Cultured Isolate,Oxford,1917-01-11,No additional comments,Mycobacterium tuberculosis,Dr. Requestor Name,req_contact@genome.com,2.2.1,East-Asian Beijing

Run,Sample_Name,SRA_Study,Organism,gender,Library,sample_type,source,cell_type
SRR4047245,GSM2286986,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047246,GSM2286987,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047247,GSM2286988,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047248,GSM2286989,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047249,GSM2286990,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047250,GSM2286991,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047251,GSM2286992,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047252,GSM2286993,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047253,GSM2286994,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047254,GSM2286995,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047255,GSM2286996,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047256,GSM2286997,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047257,GSM2286998,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047258,GSM2286999,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047259,GSM2287000,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047260,GSM2287001,SRP082522,Homo_sapiens,male,SINGLE,Pooled,iPSC-derived neural progenitor cells,NPC
SRR4047261,GSM2287002,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047262,GSM2287003,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047263,GSM2287004,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047264,GSM2287005,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047265,GSM2287006,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047266,GSM2287007,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047267,GSM2287008,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047268,GSM2287009,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047269,GSM2287010,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047270,GSM2287011,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047271,GSM2287012,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047272,GSM2287013,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047273,GSM2287014,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047274,GSM2287015,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047275,GSM2287016,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047276,GSM2287017,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047277,GSM2287018,SRP082522,Homo_sapiens,male,SINGLE,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047278,GSM2287019,SRP082522,Homo_sapiens,male,SINGLE,Pooled,iPSC-derived neural progenitor cells,NPC
SRR4047279,GSM2287020,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047280,GSM2287021,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047281,GSM2287022,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047282,GSM2287023,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047283,GSM2287024,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047284,GSM2287025,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047285,GSM2287026,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047286,GSM2287027,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047287,GSM2287028,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047288,GSM2287029,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047289,GSM2287030,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047290,GSM2287031,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047291,GSM2287032,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047292,GSM2287033,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047293,GSM2287034,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047294,GSM2287035,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047295,GSM2287036,SRP082522,Homo_sapiens,male,PAIRED,Pooled,iPSC-derived motor neurons,MN
SRR4047296,GSM2287037,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047297,GSM2287038,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047298,GSM2287039,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047299,GSM2287040,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047300,GSM2287041,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047301,GSM2287042,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047302,GSM2287043,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047303,GSM2287044,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047304,GSM2287045,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047305,GSM2287046,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047306,GSM2287047,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047307,GSM2287048,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047308,GSM2287049,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047309,GSM2287050,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047310,GSM2287051,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047311,GSM2287052,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047312,GSM2287053,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047313,GSM2287054,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047314,GSM2287055,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047315,GSM2287056,SRP082522,Homo_sapiens,male,PAIRED,Pooled,iPSC-derived motor neurons,MN
SRR4047316,GSM2287057,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047317,GSM2287058,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047318,GSM2287059,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047319,GSM2287060,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047320,GSM2287061,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047321,GSM2287062,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047322,GSM2287063,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047323,GSM2287064,SRP082522,Homo_sapiens,male,PAIRED,Pooled,iPSC-derived motor neurons,MN
SRR4047324,GSM2287065,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047325,GSM2287066,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047326,GSM2287067,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047327,GSM2287068,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047328,GSM2287069,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047329,GSM2287070,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047330,GSM2287071,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047331,GSM2287072,SRP082522,Homo_sapiens,male,PAIRED,Pooled,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047332,GSM2287073,SRP082522,Homo_sapiens,male,PAIRED,Pooled,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047333,GSM2287074,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047334,GSM2287075,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047335,GSM2287076,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047336,GSM2287077,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047337,GSM2287078,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047338,GSM2287079,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047339,GSM2287080,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047340,GSM2287081,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047341,GSM2287082,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047342,GSM2287083,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047343,GSM2287084,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047344,GSM2287085,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047345,GSM2287086,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047346,GSM2287087,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047347,GSM2287088,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047348,GSM2287089,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047349,GSM2287090,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047350,GSM2287091,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047351,GSM2287092,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047352,GSM2287093,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047353,GSM2287094,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived motor neurons,MN
SRR4047354,GSM2287095,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047355,GSM2287096,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047356,GSM2287097,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047357,GSM2287098,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047358,GSM2287099,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047359,GSM2287100,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047360,GSM2287101,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047361,GSM2287102,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047362,GSM2287103,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047363,GSM2287104,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047364,GSM2287105,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047365,GSM2287106,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047366,GSM2287107,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047367,GSM2287108,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047368,GSM2287109,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047369,GSM2287110,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047370,GSM2287111,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047371,GSM2287112,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047372,GSM2287113,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047373,GSM2287114,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047374,GSM2287115,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047375,GSM2287116,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047376,GSM2287117,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047377,GSM2287118,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047378,GSM2287119,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047379,GSM2287120,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047380,GSM2287121,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047381,GSM2287122,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047382,GSM2287123,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047383,GSM2287124,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047384,GSM2287125,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047385,GSM2287126,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047386,GSM2287127,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047387,GSM2287128,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047388,GSM2287129,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047389,GSM2287130,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047390,GSM2287131,SRP082522,Homo_sapiens,male,PAIRED,Pooled,iPSC-derived neural progenitor cells,NPC
SRR4047391,GSM2287132,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047392,GSM2287133,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047393,GSM2287134,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047394,GSM2287135,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047395,GSM2287136,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,iPSC-derived neural progenitor cells,NPC
SRR4047396,GSM2287137,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047397,GSM2287138,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047398,GSM2287139,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047399,GSM2287140,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047400,GSM2287141,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047401,GSM2287142,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047402,GSM2287143,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047403,GSM2287144,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047404,GSM2287145,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047405,GSM2287146,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047406,GSM2287147,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047407,GSM2287148,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047408,GSM2287149,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047409,GSM2287150,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047410,GSM2287151,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047411,GSM2287152,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047412,GSM2287153,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047413,GSM2287154,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047414,GSM2287155,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047415,GSM2287156,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047416,GSM2287157,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047417,GSM2287158,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047418,GSM2287159,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047419,GSM2287160,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047420,GSM2287161,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047421,GSM2287162,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047422,GSM2287163,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047423,GSM2287164,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047424,GSM2287165,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047425,GSM2287166,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047426,GSM2287167,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047427,GSM2287168,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047428,GSM2287169,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047429,GSM2287170,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047430,GSM2287171,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047431,GSM2287172,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047432,GSM2287173,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047433,GSM2287174,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047434,GSM2287175,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047435,GSM2287176,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047436,GSM2287177,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047437,GSM2287178,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047438,GSM2287179,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047439,GSM2287180,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047440,GSM2287181,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047441,GSM2287182,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047442,GSM2287183,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047443,GSM2287184,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047444,GSM2287185,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047445,GSM2287186,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047446,GSM2287187,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047447,GSM2287188,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047448,GSM2287189,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047449,GSM2287190,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047450,GSM2287191,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047451,GSM2287192,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047452,GSM2287193,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047453,GSM2287194,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047454,GSM2287195,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047455,GSM2287196,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047456,GSM2287197,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047457,GSM2287198,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC
SRR4047458,GSM2287199,SRP082522,Homo_sapiens,male,PAIRED,Single_Cell,Skin fibroblast-derived induced pluripotent cells (iPSCs),iPSC


,description,help,id,inputs,name,outputs
0,Maps BLAST results to GO annotation terms,This runs b2g4Pipe v2 5  which is the command line  no GUI  version of Blast2GO designed for use in pipelines ,blast2go,blastxml,Blast2GO,tabular
1,from two FASTA files,Takes two FASTA files   species A  and  species B    builds a BLAST database for each  runs reciprocal BLAST searchs   A vs B   and  B vs A    optionally filters the HSPs  and then compiles a list of the reciprocal best hits  RBH  ,blast_reciprocal_best_hits,fasta,BLAST Reciprocal Best Hits (RBH),tabular
2,Make a table from BLAST output,NCBI BLAST   and the older NCBI  legacy  BLAST  can output in a range of formats including text  tabular and a more detailed XML format  You can do a lot of things with tabular files in Galaxy  sorting  filtering  joins  etc   however until BLAST  2 2 28 the tabular output never included the hit descriptions  titles  found in the other output formats,blastxml_to_top_descr,"blastxml,tabular",BLAST top hit descriptions,tabular
3,Convert BLAST XML output to tabular,NCBI BLAST   and the older NCBI  legacy  BLAST  can output in a range of formats including tabular and a more detailed XML format  A complex workflow may need both the XML and the tabular output   but running BLAST twice is slow and wasteful ,blastxml_to_tabular,blastxml,BLAST XML to tabular,tabular
4,Show BLAST database information from blastdbcmd,Calls the NCBI BLAST  blastdbcmd command line tool with the  info switch to give summary information about a BLAST database  such as the size  number of sequences and total length  and date ,ncbi_blastdbcmd_info,,NCBI BLAST+ database info,txt
5,Extract sequence(s) from BLAST database,Extracts FASTA formatted sequences from a BLAST database using the NCBI BLAST  blastdbcmd command line tool ,ncbi_blastdbcmd_wrapper,"txt,tabular",NCBI BLAST+ blastdbcmd entry(s),fasta
6,Search nucleotide database with nucleotide query sequence(s),Search a  nucleotide database  using a  nucleotide query   using the NCBI BLAST  blastn command line tool  Algorithms include blastn  megablast  and discontiguous megablast ,ncbi_blastn_wrapper,fasta,NCBI BLAST+ blastn,tabular
7,Search protein database with protein query sequence(s),Search a  protein database  using a  protein query   using the NCBI BLAST  blastp command line tool ,ncbi_blastp_wrapper,fasta,NCBI BLAST+ blastp,tabular
8,Search protein database with translated nucleotide query sequence(s),Search a  protein database  using a  translated nucleotide query   using the NCBI BLAST  blastx command line tool ,ncbi_blastx_wrapper,fasta,NCBI BLAST+ blastx,tabular
9,Convert masking information in lower-case masked FASTA input to file formats suitable for makeblastdb,Convert masking information in lower case masked FASTA input to file formats suitable for makeblastdb ,ncbi_convert2blastmask_wrapper,fasta,NCBI BLAST+ convert2blastmask,maskinfo-asn1
10,Search protein database with protein query sequence(s),Search a  protein database  using a  protein query   using the NCBI BLAST  deltablast command line tool  Domain Enhanced Lookup Time Accelerated BLAST  DELTA BLAST  ,ncbi_deltablast_wrapper,fasta,NCBI BLAST+ deltablast,tabular
11,masks low complexity regions,This tool identifies and masks out low complexity regions of a nucleotide database  or sequences in FASTA format  by using the symmetric DUST  algorithm ,ncbi_dustmasker_wrapper,,NCBI BLAST+ dustmasker,maskinfo-asn1
12,Make BLAST database,Make BLAST database from one or more FASTA files and or BLAST databases ,ncbi_makeblastdb,"fasta,maskinfo-asn1,maskinfo-asn1-binary",NCBI BLAST+ makeblastdb,data
13,Make profile database,Make a protein domain profile database  for use with RPS BLAST or RSP TBLASTN  from one or more Position Specific Scoring Matrices  PSSM  files in the NCBI  scoremat  ASN 1 format  usually named     smp    ,ncbi_makeprofiledb,pssm-asn1,NCBI BLAST+ makeprofiledb,blastdbd
14,Search protein database with protein query sequence(s),Runs the Position Specific Initiated BLAST tool   psiblast   ,ncbi_psiblast_wrapper,"fasta,msa,phylip,pssm",NCBI BLAST+ psiblast,"tabular,txt,pssm"
15,Search protein domain database (PSSMs) with protein query sequence(s),Search a  protein domain database  using a  protein query   using the NCBI BLAST  rpsblast command line tool ,ncbi_rpsblast_wrapper,fasta,NCBI BLAST+ rpsblast,tabular
16,Search protein domain database (PSSMs) with translated nucleotide query sequence(s),Search a  protein domain database  using a  nucleotide query   using the NCBI BLAST  rpstblastn command line tool ,ncbi_rpstblastn_wrapper,fasta,NCBI BLAST+ rpstblastn,tabular
17,low-complexity regions in protein sequences,This tool identifies and masks out low complexity regions of a protein database  or proteins in FASTA format  by using the SEG  algorithm ,ncbi_segmasker_wrapper,,NCBI BLAST+ segmasker,maskinfo-asn1
18,Search translated nucleotide database with protein query sequence(s),Search a  translated nucleotide database  using a  protein query   using the NCBI BLAST  tblastn command line tool ,ncbi_tblastn_wrapper,fasta,NCBI BLAST+ tblastn,tabular
19,Search translated nucleotide database with translated nucleotide query sequence(s),Search a  translated nucleotide database  using a  translated nucleotide query   using the NCBI BLAST  tblastx command line tool ,ncbi_tblastx_wrapper,fasta,NCBI BLAST+ tblastx,tabular
20,from BLAST output or similar data,Takes two tabular search results files  A against B  and B against A  and compiles a list of the reciprocal best hits  RBH  ,reciprocal_best_hits,tabular,BLAST Reciprocal Best Hits (RBH),tabular
21,Gives a codon aware alignment,Takes an input file of aligned protein sequences  typically FASTA or Clustal format   and a matching file of unaligned nucleotide sequences  FASTA format  using the same identifiers   and threads the nucleotide sequences onto the protein alignment to produce a codon aware nucleotide alignment   which can be viewed as a back translation ,align_back_trans,"fasta,clustal,fasta",Thread nucleotides onto a protein alignment (back-translation),
22,from simple locus annotation,Draws a  Chromosome Diagram   with one vertical bar for each sequence in the reference FASTA file which is expected to contain one sequence per chromosome or pseudomolecule  annotated with the positions and captions given in the tabular annotation file ,chromosome_diagram,"fasta,tabular",Chromosome Diagram,pdf
23,Assembles reads giving a FASTA file,Runs the   clc assembler   tool giving a FASTA output file  You would then typically map the same set of reads onto this assembly using   cls mapper   to any perform downstream analysis using the mapped reads ,clc_assembler,"fastq,fasta",CLC assembler,fasta
24,Maps reads giving a SAM/BAM file,Runs the CLCbio tool   clc mapper   which produces a proprietary binary CAS format file  which is immediately processed using   clc cas to sam   to generate a self contained standard BAM file  which is then sorted and indexed using   samtools   ,clc_mapper,"fasta,fastqsanger,fasta",CLC Mapper,bam
25,Find nucleolar localization signals (NoLSs) in protein sequences,This calls the command line version of the NoD tool from the Barton Group for prediction of nucleolar localization sequences  NoLSs   The NoD tool uses an artificial neural network trained on a set of human NoLSs ,clinod,fasta,Nucleolar localization sequence Detector (NoD),tabular
26,using samtools view,This tool runs the command   samtools view   from the SAMtools toolkit  getting all the reads in your BAM file mapped to the given region of interest  ROI   It then counts all the different sequence variants in reads spanning that ROI  which are returned as a tab separated table ,count_roi_variants,bam,Count sequence variants in region of interest,tabular
27,using samtools idxstats and depth,This tool runs the commands   samtools idxstats   and   samtools depth   from the SAMtools toolkit  and parses their output to produce a consise summary of the coverage information for each reference sequence ,coverage_stats,bam,BAM coverage statistics,tabular
28,Find bacterial effectors in protein sequences,This calls the command line Effective T3 v1 0 1 tool for prediction of bacterial effector proteins ,effectiveT3,fasta,Effective T3,tabular
29,from a tabular file,By default it divides a FASTA file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,fasta_filter_by_id,"fasta,tabular",Filter FASTA by ID,fasta
30,from a tabular file,By default it divides a FASTQ file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,fastq_filter_by_id,"fastq,tabular",Filter FASTQ by ID,
31,using the read name suffices,Using the common read name suffix conventions  it identifies paired reads in FASTQ files  This output can be used to recover missing partners if you have the original data ,fastq_pair_names,fastq,Identify paired reads in FASTQ files,tabular
32,using the read name suffices,Using the common read name suffix conventions  it divides a FASTQ file into paired reads  and orphan or single reads ,fastq_paired_unpaired,foobar,Divide FASTQ file into paired and unpaired reads,
33,e.g. to get peptides from ESTs,Takes an input file of nucleotide sequences  typically FASTA  but also FASTQ and Standard Flowgram Format  SFF  are supported   and searches each sequence for open reading frames  ORFs  or potential coding sequences  CDSs  of the given minimum length  These are returned as FASTA files of nucleotides and protein sequences ,get_orfs_or_cdss,"fasta,fastq,sff",Get open reading frames (ORFs) or coding sequences (CDSs),"fasta,bed6,gff3"
34,Interproscan functional predictions of ORFs,    Interproscan    Interproscan is a batch tool to query the Interpro database  It provides annotations based on multiple searches of profile and other functional databases  These include SCOP  CATH  PFAM and SUPERFAMILY  Currently due to resource limitations  only the PFAM database is searched however,interproscan,fasta,Interproscan functional predictions of ORFs,tabular
35,Combine mummer/nucmer/promer with mummerplot,Takes two FASTA files   species A  and  species B    compares them using one of the MUMmer 3 tools    mummer      nucmer    or   promer     checking both strands  and then draws a dotplot using   mummerplot   ,mummerplot_wrapper,fasta,MUMmer dotplot,"pdf,png"
36,Find nuclear localization signals (NLSs) in protein sequences,This calls the NLStradamus tool for prediction of nuclear localization signals  NLSs   which uses a Hidden Markov Model  HMM  ,nlstradamus,fasta,NLStradamus,tabular
37,Find nuclear localization signals (NLSs) in protein sequences,This calls a Python re implementation of the PredictNLS tool for prediction of nuclear localization signals  NLSs   which works by looking for matches to a known set of patterns  described using regular expressions  ,predictnls,fasta,PredictNLS,tabular
38,Find eukaryotic PolII promoters in DNA sequences,This calls the Promoter 2 0 tool for prediction of eukaryotic PolII promoter sequences using a Neural Network  NN  model ,promoter2,fasta,Promoter 2.0,tabular
39,Determines sub-cellular localisation of bacterial/archaeal protein sequences,This calls the command line tool PSORTb v3 0 for prediction of prokaryotic localization sites  The input dataset needs to be protein FASTA sequences  The default output is a simple tabular file with three columns  one row per query sequence ,Psortb,fasta,psortb,tabular
40,Find RXLR Effectors of Plant Pathogenic Oomycetes,Takes a protein sequence FASTA file as input  and produces a simple tabular file as output with one line per protein  and two columns giving the sequence ID and the predicted class  This is typically just whether or not it had the selected RXLR motif  Y or N  ,rxlr_motifs,fasta,RXLR Motifs,tabular
41,Find signal peptides in protein sequences,This calls the SignalP v3 0 tool for prediction of signal peptides  which uses both a Neural Network  NN  and Hidden Markov Model  HMM  to produce two sets of scores ,signalp3,fasta,SignalP 3.0,tabular
42,Find transmembrane domains in protein sequences,This calls the TMHMM v2 0 tool for prediction of transmembrane  TM   helices in proteins using a hidden Markov model  HMM  ,tmhmm2,fasta,TMHMM 2.0,tabular
43,Eukaryote protein subcellular localization prediction,This calls the WoLF PSORT tool for prediction of eukaryote protein subcellular localization ,wolf_psort,fasta,WoLF PSORT,tabular
44,e.g. to reduce coverage,Takes an input file of sequences  typically FASTA or FASTQ  but also Standard Flowgram Format  SFF  is supported   and returns a new sequence file sub sampling uniformly from this  in the same format  preserving the input order and selecting sequencing evenly though the input file  ,sample_seqs,"fasta,fastq,sff",Sub-sample sequences files,
45,samtools bam2fq,This tool runs the   samtools bam2fq   command in the SAMtools toolkit ,samtools_bam2fq,"bam,sam",Convert BAM to FASTQ,fastqsanger
46,samtools depad,This tool runs the   samtools depad   command in the SAMtools toolkit ,samtools_depad,"fasta,sam,bam",Depad SAM/BAM file,bam
47,samtools depth,This tool runs the   samtools depth   command in the SAMtools toolkit ,samtools_depth,"bam,sam",SAM/BAM coverage depth,tabular
48,samtools idxstats,This tool runs the   samtools idxstats   command in the SAMtools toolkit ,samtools_idxstats,bam,BAM mapping statistics,tabular
49,Count bases or amino-acids,Takes input files of sequences  typically FASTA or FASTQ  but also Standard Flowgram Format  SFF  is supported   counts all the letters in each sequence  and returns a summary table of their counts and percentages ,seq_composition,"fasta,fastq,sff",Sequence composition,tabular
50,from a tabular file,By default it divides a FASTA  FASTQ or Standard Flowgram Format  SFF  file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,seq_filter_by_id,"fasta,fastq,sff,tabular",Filter sequences by ID,
51,from SAM/BAM file,By default it divides a FASTA  FASTQ or Standard Flowgram Format  SFF  file in two  those sequences  or read pairs  which do or don t map in the provided SAM BAM file  You can opt to have a single output file of just the mapping reads  or just the non mapping ones ,seq_filter_by_mapping,"fasta,fastq,sff,sam,bam",Filter sequences by mapping,
52,Trim off 5' or 3' primers,Looks for the given primer sequences  within the existing clipped sequence  and further clips the reads to remove the primers and any preceding trailing sequence ,seq_primer_clip,"fasta,fastq,sff,fasta",Primer clip sequences,
53,with ID mapping from a tabular file,Takes a FASTA  QUAL  FASTQ or Standard Flowgram Format  SFF  file and produces a new sequence file  of the same format  where the sequence identifiers have been renamed according to the specified columns in your tabular file ,seq_rename,"fasta,qual,fastq,sff,tabular",Rename sequences,
54,from a tabular file,Takes a FASTA  QUAL  FASTQ or Standard Flowgram Format  SFF  file and produces a new sequence file  of the same format  containing only the records with identifiers in the tabular file  in the order from the tabular file  ,seq_select_by_id,"fasta,qual,fastq,sff,tabular",Select sequences by ID,
55,from lists,Draws Venn Diagram for one  two or three sets  as a PDF file  ,venn_list,"tabular,fasta,fastq,sff",Venn Diagram,pdf
56,Gives a codon aware alignment,Takes an input file of aligned protein sequences  typically FASTA or Clustal format   and a matching file of unaligned nucleotide sequences  FASTA format  using the same identifiers   and threads the nucleotide sequences onto the protein alignment to produce a codon aware nucleotide alignment   which can be viewed as a back translation ,align_back_trans,"fasta,clustal,fasta",Thread nucleotides onto a protein alignment (back-translation),
57,from simple locus annotation,Draws a  Chromosome Diagram   with one vertical bar for each sequence in the reference FASTA file which is expected to contain one sequence per chromosome or pseudomolecule  annotated with the positions and captions given in the tabular annotation file ,chromosome_diagram,"fasta,tabular",Chromosome Diagram,pdf
58,Assembles reads giving a FASTA file,Runs the   clc assembler   tool giving a FASTA output file  You would then typically map the same set of reads onto this assembly using   cls mapper   to any perform downstream analysis using the mapped reads ,clc_assembler,"fastq,fasta",CLC assembler,fasta
59,Maps reads giving a SAM/BAM file,Runs the CLCbio tool   clc mapper   which produces a proprietary binary CAS format file  which is immediately processed using   clc cas to sam   to generate a self contained standard BAM file  which is then sorted and indexed using   samtools   ,clc_mapper,"fasta,fastqsanger,fasta",CLC Mapper,bam
60,Find nucleolar localization signals (NoLSs) in protein sequences,This calls the command line version of the NoD tool from the Barton Group for prediction of nucleolar localization sequences  NoLSs   The NoD tool uses an artificial neural network trained on a set of human NoLSs ,clinod,fasta,Nucleolar localization sequence Detector (NoD),tabular
61,using samtools view,This tool runs the command   samtools view   from the SAMtools toolkit  getting all the reads in your BAM file mapped to the given region of interest  ROI   It then counts all the different sequence variants in reads spanning that ROI  which are returned as a tab separated table ,count_roi_variants,bam,Count sequence variants in region of interest,tabular
62,using samtools idxstats and depth,This tool runs the commands   samtools idxstats   and   samtools depth   from the SAMtools toolkit  and parses their output to produce a consise summary of the coverage information for each reference sequence ,coverage_stats,bam,BAM coverage statistics,tabular
63,Find bacterial effectors in protein sequences,This calls the command line Effective T3 v1 0 1 tool for prediction of bacterial effector proteins ,effectiveT3,fasta,Effective T3,tabular
64,from a tabular file,By default it divides a FASTA file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,fasta_filter_by_id,"fasta,tabular",Filter FASTA by ID,fasta
65,from a tabular file,By default it divides a FASTQ file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,fastq_filter_by_id,"fastq,tabular",Filter FASTQ by ID,
66,using the read name suffices,Using the common read name suffix conventions  it identifies paired reads in FASTQ files  This output can be used to recover missing partners if you have the original data ,fastq_pair_names,fastq,Identify paired reads in FASTQ files,tabular
67,using the read name suffices,Using the common read name suffix conventions  it divides a FASTQ file into paired reads  and orphan or single reads ,fastq_paired_unpaired,foobar,Divide FASTQ file into paired and unpaired reads,
68,e.g. to get peptides from ESTs,Takes an input file of nucleotide sequences  typically FASTA  but also FASTQ and Standard Flowgram Format  SFF  are supported   and searches each sequence for open reading frames  ORFs  or potential coding sequences  CDSs  of the given minimum length  These are returned as FASTA files of nucleotides and protein sequences ,get_orfs_or_cdss,"fasta,fastq,sff",Get open reading frames (ORFs) or coding sequences (CDSs),"fasta,bed6,gff3"
69,Interproscan functional predictions of ORFs,    Interproscan    Interproscan is a batch tool to query the Interpro database  It provides annotations based on multiple searches of profile and other functional databases  These include SCOP  CATH  PFAM and SUPERFAMILY  Currently due to resource limitations  only the PFAM database is searched however,interproscan,fasta,Interproscan functional predictions of ORFs,tabular
70,Combine mummer/nucmer/promer with mummerplot,Takes two FASTA files   species A  and  species B    compares them using one of the MUMmer 3 tools    mummer      nucmer    or   promer     checking both strands  and then draws a dotplot using   mummerplot   ,mummerplot_wrapper,fasta,MUMmer dotplot,"pdf,png"
71,Find nuclear localization signals (NLSs) in protein sequences,This calls the NLStradamus tool for prediction of nuclear localization signals  NLSs   which uses a Hidden Markov Model  HMM  ,nlstradamus,fasta,NLStradamus,tabular
72,Find nuclear localization signals (NLSs) in protein sequences,This calls a Python re implementation of the PredictNLS tool for prediction of nuclear localization signals  NLSs   which works by looking for matches to a known set of patterns  described using regular expressions  ,predictnls,fasta,PredictNLS,tabular
73,Find eukaryotic PolII promoters in DNA sequences,This calls the Promoter 2 0 tool for prediction of eukaryotic PolII promoter sequences using a Neural Network  NN  model ,promoter2,fasta,Promoter 2.0,tabular
74,Determines sub-cellular localisation of bacterial/archaeal protein sequences,This calls the command line tool PSORTb v3 0 for prediction of prokaryotic localization sites  The input dataset needs to be protein FASTA sequences  The default output is a simple tabular file with three columns  one row per query sequence ,Psortb,fasta,psortb,tabular
75,Find RXLR Effectors of Plant Pathogenic Oomycetes,Takes a protein sequence FASTA file as input  and produces a simple tabular file as output with one line per protein  and two columns giving the sequence ID and the predicted class  This is typically just whether or not it had the selected RXLR motif  Y or N  ,rxlr_motifs,fasta,RXLR Motifs,tabular
76,Find signal peptides in protein sequences,This calls the SignalP v3 0 tool for prediction of signal peptides  which uses both a Neural Network  NN  and Hidden Markov Model  HMM  to produce two sets of scores ,signalp3,fasta,SignalP 3.0,tabular
77,Find transmembrane domains in protein sequences,This calls the TMHMM v2 0 tool for prediction of transmembrane  TM   helices in proteins using a hidden Markov model  HMM  ,tmhmm2,fasta,TMHMM 2.0,tabular
78,Eukaryote protein subcellular localization prediction,This calls the WoLF PSORT tool for prediction of eukaryote protein subcellular localization ,wolf_psort,fasta,WoLF PSORT,tabular
79,e.g. to reduce coverage,Takes an input file of sequences  typically FASTA or FASTQ  but also Standard Flowgram Format  SFF  is supported   and returns a new sequence file sub sampling uniformly from this  in the same format  preserving the input order and selecting sequencing evenly though the input file  ,sample_seqs,"fasta,fastq,sff",Sub-sample sequences files,
80,samtools bam2fq,This tool runs the   samtools bam2fq   command in the SAMtools toolkit ,samtools_bam2fq,"bam,sam",Convert BAM to FASTQ,fastqsanger
81,samtools depad,This tool runs the   samtools depad   command in the SAMtools toolkit ,samtools_depad,"fasta,sam,bam",Depad SAM/BAM file,bam
82,samtools depth,This tool runs the   samtools depth   command in the SAMtools toolkit ,samtools_depth,"bam,sam",SAM/BAM coverage depth,tabular
83,samtools idxstats,This tool runs the   samtools idxstats   command in the SAMtools toolkit ,samtools_idxstats,bam,BAM mapping statistics,tabular
84,Count bases or amino-acids,Takes input files of sequences  typically FASTA or FASTQ  but also Standard Flowgram Format  SFF  is supported   counts all the letters in each sequence  and returns a summary table of their counts and percentages ,seq_composition,"fasta,fastq,sff",Sequence composition,tabular
85,from a tabular file,By default it divides a FASTA  FASTQ or Standard Flowgram Format  SFF  file in two  those sequences with or without an ID present in the tabular file column s  specified  You can opt to have a single output file of just the matching records  or just the non matching ones ,seq_filter_by_id,"fasta,fastq,sff,tabular",Filter sequences by ID,
86,from SAM/BAM file,By default it divides a FASTA  FASTQ or Standard Flowgram Format  SFF  file in two  those sequences  or read pairs  which do or don t map in the provided SAM BAM file  You can opt to have a single output file of just the mapping reads  or just the non mapping ones ,seq_filter_by_mapping,"fasta,fastq,sff,sam,bam",Filter sequences by mapping,
87,Trim off 5' or 3' primers,Looks for the given primer sequences  within the existing clipped sequence  and further clips the reads to remove the primers and any preceding trailing sequence ,seq_primer_clip,"fasta,fastq,sff,fasta",Primer clip sequences,
88,with ID mapping from a tabular file,Takes a FASTA  QUAL  FASTQ or Standard Flowgram Format  SFF  file and produces a new sequence file  of the same format  where the sequence identifiers have been renamed according to the specified columns in your tabular file ,seq_rename,"fasta,qual,fastq,sff,tabular",Rename sequences,
89,from a tabular file,Takes a FASTA  QUAL  FASTQ or Standard Flowgram Format  SFF  file and produces a new sequence file  of the same format  containing only the records with identifiers in the tabular file  in the order from the tabular file  ,seq_select_by_id,"fasta,qual,fastq,sff,tabular",Select sequences by ID,
90,from lists,Draws Venn Diagram for one  two or three sets  as a PDF file  ,venn_list,"tabular,fasta,fastq,sff",Venn Diagram,pdf
91,"Takes Sanger, Roche, Illumina, and Ion Torrent data",Runs MIRA v3 4  collects the output  and throws away all the temporary files ,mira_assembler,"fasta,fastq",Assemble with MIRA v3.4,"fasta,qual454,txt,wig"
92,Filter reads using kmer matches,Runs the   mirabait   utility from MIRA v4 0 to filter your input reads according to whether or not they contain perfect kmer matches to your bait file  By default this looks for 31 mers  kmers or  k  mers where the fragment length  k  is 31   and only requires a single matching kmer ,mira_4_0_bait,"fasta,fastq,mira",MIRA v4.0 mirabait,
93,Convert MIRA assembly to FASTA/SAM/BAM,Runs the   miraconvert   utility from MIRA v4 0 to filter and or convert a MIRA Assembly Format file produced by a  mapping  or  de novo  assembly ,mira_4_0_convert,mira,MIRA v4.0 miraconvert,"mira,fasta,bam,tabular"
94,"Takes Sanger, Roche 454, Solexa/Illumina, Ion Torrent and PacBio reads",Runs MIRA v4 0 in de novo mode  collects the output  generates a sorted BAM file  and then throws away all the temporary files ,mira_4_0_de_novo,"fastq,mira",MIRA v4.0 de novo assember,"fasta,bam,mira,txt"
95,"Maps Sanger, Roche 454, Solexa/Illumina, Ion Torrent and PacBio reads",Runs MIRA v4 0 in mapping mode  collects the output  generates a sorted BAM file  and throws away all the temporary files ,mira_4_0_mapping,"fasta,fastq,mira,fastq,mira",MIRA v4.0 mapping,"fasta,bam,mira,txt"
96,Filter reads using kmer matches,Runs the   mirabait   utility from MIRA v4 9 to filter your input reads according to whether or not they contain perfect kmer matches to your bait file  By default this looks for 31 mers  kmers or  k  mers where the fragment length  k  is 31   and only requires a single matching kmer ,mira_4_9_bait,"fasta,fastq,mira,fastq,fasta,fasta,fastq",MIRA v4.9 mirabait,
97,from expression,Adds a surface field to a selected shape based on a given mathematical expression consisting of variables x  y  z  shape point coordinates  and t  time    This tool will generate VTK POLYDATA files  so input PLY files or VTK files with a different dataset type will automatically be converted to VTK POLYDATA during tool execution ,icqsol_add_surface_field_from_expression,"plyascii,plybinary,vtkascii,vtkbinary",Add surface field,vtkascii
98,to shape,Adds a texture by applying an image to the surface of a shape   The shape is projected onto a bounding box and the color is selected by flattening the box to fit the image   Refinement can be applied for a smoother result ,icqsol_add_texture,"vtkascii,vtkbinary,jpg,png",Add texture,vtkascii
99,,Coarsens a shape by ensuring that cells are larger than a given tolerance  resulting in a less detailed shape ,icqsol_coarsen_shape,"plyascii,plybinary,vtkascii,vtkbinary",Coarsen shape,vtkascii
100,field,Colors a shape s selected surface field using a selected color map   This tool will restrict selected input shapes to only those that have at least one surface field ,icqsol_color_surface_field,"vtkascii,vtkbinary",Color,
101,,Creates a shape composed of any number of selected shapes where the composition is based on a mathematical expression consisting of              and       operations   The       results in a union of shapes  the       operator removes a shape and the       operator results in an intersection of shapes ,icqsol_compose_shapes,"plyascii,plybinary,vtkascii,vtkbinary",Compose shapes,vtkascii
102,,  Create a shape     creates a selected primitive shape where shapes are Box  Cone  Cylinder and Sphere ,icqsol_create_shape,"plyascii,plybinary,vtkascii,vtkbinary",Create shape,vtkascii
103,,Refines a shape by limiting all edges to a specified length  resulting in a more detailed shape ,icqsol_refine_shape,"plyascii,plybinary,vtkascii,vtkbinary",Refine shape,vtkascii
104,,Applies a rotation to a shape by a given angle about an arbitrary axis ,icqsol_rotate_shape,"plyascii,plybinary,vtkascii,vtkbinary",Rotate shape,vtkascii
105,,Magnifies the dimensions of a shape along the X  Y and Z directions ,icqsol_scale_shape,"plyascii,plybinary,vtkascii,vtkbinary",Scale shape,vtkascii
106,- computes the jump of normal electric field,Computes the jump in flux like  Neumann  boundary conditions given prescribed Dirichlet boundary conditions by using the boundary element method   Depending on the problem  the jump can be the surface flux or the normal electric field in electrostatic problems  The Dirichlet field is often called the potential  e g,icqsol_solve_laplace,"vtkascii,vtkbinary",Solve Laplace equation,
107,,Applies translation operations to a shape by adding a displacement to each coordinate ,icqsol_translate_shape,"plyascii,plybinary,vtkascii,vtkbinary",Translate shape,vtkascii
108,using REST API,Retrieve feature information in JSON format from Ensembl using its REST API ,get_feature_info,txt,Get features by Ensembl ID,json
109,using REST API,Retrieve a gene tree from Ensembl using its REST API ,get_genetree,,Get gene tree by Ensembl ID,json
110,using REST API,Retrieves FASTA sequences from Ensembl using its REST API ,get_sequences,txt,Get sequences by Ensembl ID,fasta
111,generates an SQLite database that can be visualised with Aequatus,  Simple tool to generate an SQLite database that can be visualised with  Aequatus     Aequatus is an open source homology browser developed with novel rendering approaches to visualise homologous  orthologous and paralogous gene structures   N B,gafa,"nhx,fasta,sqlite",Gene Align and Family Aggregator,gafa.sqlite
112, Compiles network from list of genes, MultiPEN includes a Wrapper to use the R package STRINGdb  bioconductor   Search Tool for the Retrieval of Interacting Proteins database  see  org packages release bioc html STRINGdb html       ,MultiPEN-StringDBNetwork,tabular,StringDB Network,txt
113, to select the best lambda for MultiPEN (regularisation parameter) , The performance of MultiPEN depends on the lambda parameter  Cross validation is used to select the best lambda  by providing statistics such as the largest connected component  the number of selected features and the area under the curve  To see the documentation for MultiPEN visit  com TGAC MultiPEN ,MultiPEN-cross-validation,"tabular,txt",Cross Validation,txt
114, (enrichment with Gene Ontology), MultiPEN includes a Wrapper to use the R package clusterProfiler to perform over representation analysis with Gene Ontology      ,MultiPEN-enrichment-GO,tabular,Enrichment with GO,"txt,pdf"
115, (enrichment with KEGG), MultiPEN includes a Wrapper to use the R package ClusterProfiler  Yu et al   2012  to perform over representation analysis with KEGG      ,MultiPEN-enrichment-KEGG,tabular,Enrichment with KEGG,"txt,pdf"
116,Feature selection from gene expression levels and/or metabolite levels, To see the documentation for MultiPEN visit  com TGAC MultiPEN       ,MultiPEN-feature-selection,"tabular,txt",Feature Selection,txt
117,Generate a phylogenetic tree using CDS alignment and species tree, TreeBeST    gene Tree Building guided by Species Tree  is a versatile program that builds  manipulates and displays phylogenetic trees  It is particularly designed for building gene trees with a known species tree and is highly efficient and accurate ,treebest_best,"nhx,fasta",TreeBeST best,nhx
118,Large-scale identification of similar protein pockets,             Description              APoc may be used to compare two pockets  a pocket against a set of pockets  or all against all between two sets of pockets  If you supply two structures to compare  the first structure is the template and the second structure is the query  or target    For each pair of structures  the program first performs a global structural comparison in sequential order using a standard TM align algoritm  One may elect to bypass the global alignment to accelerate comparison,apoc,"pdb,data",APoc,txt
119,"
        Convert 12- or 24-column BLAST output into 3-column hcluster_sg input
    ",  Simple tool to convert a 12  or 24 column BLAST output into a 3 column format  qseqid  sseqid  round  1   log10 evalue  2   usable as input for the hcluster sg tool       ,blast_parser,tabular,BLAST parser,tabular
120,generates the ETE sqlite DB from the NCBI taxdump.tar.gz, Generates the ETE sqlite data base from the NCBI taxdump tar gz using the  ,ete_init_taxdb,tar,ETE taxa DB generator,sqlite
121,from a list of species/taxids using the ETE Toolkit, Generates a table with lineage information for a list of species  also taxids and arbitrary taxons are accepted  using the     ETE Toolkit   org     Input       Species file  a single column tabular file     ETE3  Taxonomy Database  a sqlite database that has been created by ETE from the NCBI taxonomy dump    Options       Taxonomic levels  the columns to be incuded in the output table,ete_lineage_generator,"txt,sqlite",ETE lineage generator,tsv
122,"manipulates tree topology by rooting, pruning or sorting branches", Modify a given input tree using the etetoolkit   org      ,ete3_mod,nhx,ETE mod,nhx
123,from a list of species using the ETE Toolkit,      Generate a species tree from a list of species using the  ETE Toolkit         ETE Toolkit  ,ete_species_tree_generator,"txt,sqlite",ETE species tree generator,nhx
124,, Simple tool to copy datasets to a directory on the cluster      ,export_to_cluster,data,Export datasets to cluster,txt
125,converts data for the workflow,This tool converts a set of GFF3 and or JSON gene feature information datasets into SQLite format ,gstf_preparation,"gff3,json,fasta",GeneSeqToFamily preparation,"sqlite,fasta"
126,Hierarchically clustering on a sparse graph, Simple wrapper for  hcluster sg         hcluster sg  ,hcluster_sg,tabular,hcluster_sg,tabular
127,converts hcluster_sg 3-column output into lists of IDs,  A simple parser to convert the hcluster sg output into lists of IDs  one list for each cluster   When a minimum and or maximum number of cluster elements are specified  the IDs contained in the filtered out clusters are collected in the  discarded IDS  output dataset       ,hcluster_sg_parser,tabular,hcluster_sg parser,txt
128,finds potential target sites for miRNAs in genomic sequences,   miRanda   is an algorithm for the detection of potential microRNA target sites in genomic sequences   One or more miRNA sequences are scanned against all query sequences and potential target sites are reported  Potential target sites are identified using a two step strategy  First a dynamic programming local alignment is carried out between the query miRNA sequence and the reference sequence,miranda,fasta,miRanda,"txt,tabular"
129,Plot heatmap,It takes a list of genes based on set filtering criteria and draws them on heatmap ,plotheatmap,tabular,plotHeatmap,pdf
130,Binding Mode Prediction in Proteins/RNA, rDock   is a fast and versatile open source docking program that can be used to dock small molecules against proteins and nucleic acids  It is designed for High Throughput Virtual Screening  HTVS  campaigns and Binding Mode prediction studies ,rdock,"prm,mol2,sdf",rDock,tabular
131,in a tabular dataset using a mapping table,Replace chromosome names in a tabular  e g  VCF  dataset using a mapping table ,replace_chromosome_names,tabular,Replace chromosome names,
132,in RSAT Matrix Scan output,Filter the output generated by  RSAT Matrix Scan  tool to select only the  site  lines which contain a SNP in the sequence  according to the list of SNP positions provided ,rsat_filter_snps,"txt,tabular,tabular",Filter SNPs,tabular
133,Search domains in protein sequences using SMART, A simple tool to search domains in multiple protein sequences contained in a FASTA file using the  SMART   web service   Written by Ivica Letunic  ivica letunic com   Modified by Anil Thanki  Anil Thanki earlham,smart_domains,fasta,SMART domains,
134,multiple sequence alignment,This tool is a wrapper for the T Coffee multiple sequence alignment suite  The input is a set of sequences in FASTA format  Apart from running on the complete FASTA input  it can also run on a subset of sequences by providing a list of the FASTA IDs ,t_coffee,"fasta,txt",T-Coffee,"clustalw,nhx,fasta,msf,phyloxml,pir,ascii,html"
135,Prediction of microRNA targets,  Wrapper for the  TargetScan   pipeline to predict microRNA targets       TargetScan  ,targetscan,tabular,TargetScan,tabular
136,Summarise an assembly (e.g. N50 metrics),      Summarise assembly overview        This script is used to give summary statistics of an assembly or set of reads  Typically this is run after an assembly to evaluate gross features         Gives back        N50        num of contigs   1 kb        num of contigs        Read or Contig Histogram and graphs         Summed contig length  by number of contigs  in sorted order            ,assemblystats,fasta,assemblystats,"tabular,fasta,png"
137,"Generates a csv file containing stats at each position in the reference, for the selected alignment.",Generates a csv file containing stats at each position in the reference  for the selected alignment ,bam2mappingstats,"bam,fasta",BAM 2 Mapping Stats,csv
138,Download a collection of files,  This tool will bundle up files in a list collection into a downloadable zip file,bundle_collection,data,Bundle Collection,html
139,into single dataset in order of the collection,  Combines a list collection into a single file dataset with option to include dataset names or merge common header line    ,collapse_dataset,data,Collapse Collection,
140,Combines List Collection Assembly Statistics ,     ,combine_stats,,Combine AssemblyStats,tabular
141,Combine Tabular with same header, Concatenates tabular files into a single file  when they share the same header      ,combine,,Combine,tabular
142,Create Bed file from Multiple fasta file,     Create a bed file format using the start and end position of one or more fata record in a fasta file       ,fasta2bed,fasta,Fasta to Bed File,bed
143,Extract a single sequence from a fasta file.,   Fasta Extract Sequence   Extracts a fasta sequence from a multfasta by id  exact or partial   Latest author  Written by Philip Mabon     Public Health Agency of Canada  Original authors  Written by Torsten Seemann   Victorian Bioinformatics Consortium  Wrapped by Simon Gladman   Victorian Bioinformatics Consortium           Outputs in fasta format               Inputs   Fasta dataset  Sequence id     ,fa-extract-sequence,"fasta,txt",Fasta Extract Sequence,fasta
144,Provide a one line summary of a FastQC report(s),Inputs            Is this library single or paired end     Choose Single end or Paired end  This option will display the correct number of input fields depending on the option selected     Fastq input      Fastqc file     FastQC rawData input      This is the txt file produced by the FastQC tool     Sample Name    Sample name that will appear in the output file     Reference file or number of base pairs     Choose between providing a reference file or providing a number of basepairs to determine the raw genome coverage ,FastQC_Summary,"fastqsanger,fastq,txt,fasta",FastQC Summary,tabular
145,Automatically identify makers predictive of groups.,        feht                                                        feht   pronounced  fate   as the  eh  is Canadian                                                    A command line program to automatically identify markers predictive of groups  Can be used with binary data  genomic  single nucleotide variant  data  or arbitrary character data               File format              The program takes command line arguments  of which 2 are required    i   which specifies the information  eg  metadata  file  and   d   which specifies the data file,feht,"txt, csv",feht,tabular
146,Remove short and repeat contigs/scaffolds,                        What does it do                       Using the output of SPAdes  a fasta and a stats file  either from contigs or scaffolds   it filters the fasta files  discarding all sequences that are under a given length or under a calculated coverage  Repeated contigs are detected based on coverage                Output                  Filtered sequences  with repeats        Will contain the filtered contigs scaffolds including the repeats  These are the sequences that passed the length and minumum coverage cutoffs,filter_spades_repeat,"fasta,tabular",Filter SPAdes repeats,"fasta,txt"
147,Download MLST datasets by species from pubmlst.org,Searches a database for a given organism and returns the MLST Database fasta  and MLST Definitions tabular  ,getmlst,,getmlst,"fasta,tabular"
148,SNV Subtyping with genome assemblies or reads,                                                               bio hansel   Heidelberg And eNteritidis Snp ELucidation                                                              Subtype  Salmonella enterica  subsp  enterica serovar Heidelberg and Enteritidis genomes using  in silico  33 bp k mer SNP subtyping schemes developed by Genevieve Labbe et al  Subtype  Salmonella  genome assemblies  FASTA files  and or whole genome sequencing reads  FASTQ files     Usage       1  Enter your FASTA FASTQ file s  2  Select which scheme you would like to use  e g,bio_hansel,"fastqsanger, fastq, fasta,fastqsanger, fastq,fasta",Bio Hansel,tabular
149,with options and commands, Options Summary for HIV Trace    Sequence file    A FASTA file  with nucleotide sequences to be analyzed  Each sequence will be aligned to the chosen reference sequence prior to network inference  Sequence names may include munged attributes  e g,hivtrace,fasta,HIV-Trace,txt
150,reports information about capsular (K) loci found in genome assemblies.,         Documentation available    com katholt Kaptive blob master README md     Acknowledgments       Tool Wrapper Author  Philip Mabon      ,kaptive,"fasta,genbank",Kaptive,"tabular,txt,fasta"
151,Filtering reads or k-mer from fasta file,  readthedocs io en latest using html filtering tools       ,kat_@EXECUTABLE@,fasta,KAT @EXECUTABLE@,"fastqsanger,tabular"
152, Estimates the coverage of each sequence in a file using K-mers from another sequence file(s).,    readthedocs io en latest using html sect       ,kat_@EXECUTABLE@,fasta,KAT @EXECUTABLE@,"tabular,txt"
153,with options and commands,MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models  MrBayes uses Markov chain Monte Carlo  MCMC  methods to estimate the posterior distribution of model parameters ,mrbayes,nex,MrBayes,txt
154,Explores plasmid content in WGS data,Heatmap display of plasmid content in WGS data,plasmid_profiler,tabular,Plasmid Profiler,"png,html,csv"
155,genome assembler for plasmids,SPAdes   St  Petersburg genome assembler   is intended for both standard isolates and single cell MDA bacteria assemblies  See  spbau,plasmidspades,"fastq,fasta",plasmidspades,"fasta,tabular,txt"
156,Builds an aa census and returns its coverage,  Amino Acid Coverage                      Builds an amino acid census and returns its coverage     Output    A file with one entry per line with the AA position and the coverage at the position       ,aacoverage,"bam,fasta,bed",Amino Acid Coverage,csv
157,Identifies amino acid mutations,  Amino Acid Variants                      Identifies amino acid mutations       ,aavariants,"bam,fasta,vcf,bed,tsv",Amino Acid Variants,vcf
158,Identifies codon variants and non-synonymous/synonymous mutations,  Codon Variants                 Call codon variants for a given BAM  A report is generated that details nucleotide variants within a  codon and the resulting AA variants  The report indicates whether the nucleotide variants correspond to a synonymous or non synonymous mutation       ,callcodonvar,"bam,fasta,bed",Codon Variants,csv
159,Identifies nucleotide variants,          Nucleotide Variants                      Call nucleotide variants for a given BAM file and a supplied reference file       ,callntvar,"bam,fasta",Nucleotide Variants,vcf
160,Generate a consensus sequence from a BAM file,  Consensus            Generate a consensus sequence for a given BAM and reference file   Percentage info  When percentage is set to 100  the most frequent base will be incorporated  note  in the case of a tie the base will be chosen in reverse alphabetical order   Insertions that are at least a multiple of 3 will be incorporated  i e,consensus,"bam,fasta",Consensus Sequence,fasta
161,Calculate the dN/dS value for each region in a bed file,  dNdS Report                      Determines the dNdS ratio for each codon variant in a supplied csv file  codon variants        ,dnds,"csv,fasta",dNdS Report,csv
162,,  Drug Resistance Mutations                            Generates a report detailing the drug resistant mutations found  above the reporting threshold  default  1         ,drmutations,"bam,fasta,vcf,bed,tsv",Drug Resistance Mutations,csv
163,Identifies drug resistance within an NGS dataset,  HyDRA   HIV Drug Resistance Analyzer                                       The HyDRA pipeline provides a pipeline for identifying drug resistance within a Next Generation Sequencing dataset  The pipeline takes as input the raw reads produced by a Next Generation Sequencer and produces a report detailing found drug resistance per sample   Authors          The HyDRA pipeline was developed by Eric Enns and David Peddle   Stages         The HyDRA pipleine proceeds through the following stages   1,hydra,"fastq,tsv",Hydra pipeline,"bam,csv,fastq,vcf,txt"
164,Runs seqTK sample if raw coverage is above user defined threshold ,      Usage      ,seqtk_nml_sample,"fastqsanger,fasta",seqTK Sample NML,"fastqsanger,txt"
165,"
    Salmonella In Silico Typing Resource commandline tool for serovar prediction
  ",     Usage        usage  sistr cmd   h    i fasta path genome name    f OUTPUT FORMAT                         o OUTPUT PREDICTION    M    p CGMLST PROFILES                         n NOVEL ALLELES    a ALLELES OUTPUT    T TMP DIR    K                          use full cgmlst db     no cgmlst    m     qc    t THREADS                         v    V                        F  F            SISTR  Salmonella In Silico Typing Resource  Command line Tool                                                                        Serovar predictions from whole genome sequence assemblies by determination of antigen gene and cgMLST gene alleles using BLAST,sistr_cmd,fasta,sistr_cmd,"csv,json,tabular,fasta"
166,Map query reads (FASTA/FASTQ) format onto the reference sequences,SMALT is a pairwise sequence alignment program for the experimentingcient mapping of DNA sequencing reads onto genomic reference sequences  It uses a combination of short word hashing and dynamic programming  Most types of sequencing platforms are supported including paired end sequencing reads ,smalt,"fastq,fastq,fastqsanger,fastqillumina,fastqsolexa,fasta,sam",smalt,cigar
167,with options and commands,     Frequently Asked Questions        SpolPred only accepts one FASTQ file  what if I have got paired end reads       Forward and reverse read files can be merged into one by making use of the Perl script   shuffleSequences fastq pl provided in Velvet software suite  SpolPred run will therefore take longer   than using only forward or reverse reads  In our dataset  read Methods for more details   the forward file   had enough reads to find all present spacers and infer the octal code for 49 out of 51 samples,spolpred,fastqsanger,SpolPred,tabular
168,Short Read Sequence Typing for Bacterial Pathogens,Short Read Sequence Typing for Bacterial Pathogens,srst2,"fastqsanger,tabular,fasta",SRST2,"bam,tabular,fasta"
169,k-mer tool for multilocus sequence typing, Original manual for command line available at  biology gatech edu page software stringmlst stringMLST useageDocumentation,stringmlst,"fastqsanger,tabular,fasta",StringMLST,"tabular,txt,fastqsanger"


"Direction","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","Count","geneID","Ontology"
"1","GO:0044708","single-organism behavior","16/88","417/14042",5.61495288643537e-09,1.01293750071294e-05,8.49926552704638e-06,16,"Nr4a2/Adcyap1/Crhbp/Tac1/Lmx1a/C1ql1/Klhl1/Slitrk6/Foxa2/Kit/Lmx1b/Neurod2/Nrxn1/Foxb1/Bdnf/Chl1","BP"
"1","GO:0007409","axonogenesis","15/88","381/14042",1.26437269313312e-08,1.14046416920607e-05,9.56930490908116e-06,15,"Nr4a2/Myo5b/Ret/Lmx1a/Nrp2/Epha7/Slitrk6/Ntn1/Ntng1/Sema5a/Foxb1/Prdm8/Bdnf/Etv4/Chl1","BP"
"1","GO:0061564","axon development","15/88","408/14042",3.1453681139674e-08,1.8914146925324e-05,1.58703135013513e-05,15,"Nr4a2/Myo5b/Ret/Lmx1a/Nrp2/Epha7/Slitrk6/Ntn1/Ntng1/Sema5a/Foxb1/Prdm8/Bdnf/Etv4/Chl1","BP"
"1","GO:0001764","neuron migration","9/88","154/14042",4.95765282876273e-07,0.000223590142577199,0.000187608020204232,9,"Nr4a2/Pitx2/Nrp2/Ntn1/Erbb4/Lmx1b/Hsp90aa1/Barhl1/Chl1","BP"
"1","GO:0008137","NADH dehydrogenase (ubiquinone) activity","5/88","26/14003",5.18033754950961e-07,5.29215167156547e-05,4.59834805529325e-05,5,"ND2/ND1/ND5/ND4/ND6","MF"
"1","GO:0050136","NADH dehydrogenase (quinone) activity","5/88","26/14003",5.18033754950961e-07,5.29215167156547e-05,4.59834805529325e-05,5,"ND2/ND1/ND5/ND4/ND6","MF"
"1","GO:0003954","NADH dehydrogenase activity","5/88","27/14003",6.32632693073407e-07,5.29215167156547e-05,4.59834805529325e-05,5,"ND2/ND1/ND5/ND4/ND6","MF"
"1","GO:0070469","respiratory chain","7/90","79/14216",6.44362467245842e-07,6.65941156401621e-05,5.60792552759259e-05,7,"ND2/ND1/ND5/ND4/CYTB/ND6/COX1","CC"
"1","GO:0050769","positive regulation of neurogenesis","14/88","452/14042",7.6404123851785e-07,0.000247633443195799,0.000207782058183895,14,"Adcyap1/Foxa1/Myo5b/Ret/Lmx1a/Foxa2/Ntn1/Kit/Neurod2/Dmrta2/Tcf4/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0098793","presynapse","12/90","321/14216",8.10125786366342e-07,6.65941156401621e-05,5.60792552759259e-05,12,"Adcyap1/Slc17a6/Gabra2/Crhbp/C1ql1/Cdh8/Calb2/Unc13c/Tmem163/Grm2/Nrxn1/Bdnf","CC"
"1","GO:0042773","ATP synthesis coupled electron transport","6/88","52/14042",8.2361455608359e-07,0.000247633443195799,0.000207782058183895,6,"ND2/ND5/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0001077","transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding","10/88","212/14003",8.25802625672397e-07,5.29215167156547e-05,4.59834805529325e-05,10,"Nr4a2/Pitx2/Foxa1/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Tcf4/Barhl1","MF"
"1","GO:0030424","axon","14/90","459/14216",1.05148603642361e-06,6.65941156401621e-05,5.60792552759259e-05,14,"Adcyap1/Slc17a6/Gabra2/Crhbp/Ret/Tac1/C1ql1/Nrp2/Calb2/Unc13c/Grm2/Nrxn1/Bdnf/Ncam2","CC"
"1","GO:0000977","RNA polymerase II regulatory region sequence-specific DNA binding","14/88","464/14003",1.07823106119599e-06,5.29215167156547e-05,4.59834805529325e-05,14,"Nr4a2/Pitx2/Ebf1/Ebf2/Ebf3/Lmx1a/Neurod6/Foxa2/Lmx1b/Neurod2/Tcf4/Nhlh2/Barhl1/Etv4","MF"
"1","GO:0001012","RNA polymerase II regulatory region DNA binding","14/88","470/14003",1.25544772555275e-06,5.29215167156547e-05,4.59834805529325e-05,14,"Nr4a2/Pitx2/Ebf1/Ebf2/Ebf3/Lmx1a/Neurod6/Foxa2/Lmx1b/Neurod2/Tcf4/Nhlh2/Barhl1/Etv4","MF"
"1","GO:0071542","dopaminergic neuron differentiation","5/88","31/14042",1.28784962921877e-06,0.000331897247301522,0.00027848537846866,5,"Nr4a2/Lmx1a/Foxa2/Lmx1b/Dmrta2","BP"
"1","GO:0001228","transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding","11/88","283/14003",1.52414319807013e-06,5.29215167156547e-05,4.59834805529325e-05,11,"Nr4a2/Pitx2/Foxa1/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Neurod2/Tcf4/Barhl1","MF"
"1","GO:0016655","oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","5/88","32/14003",1.53953503172814e-06,5.29215167156547e-05,4.59834805529325e-05,5,"ND2/ND1/ND5/ND4/ND6","MF"
"1","GO:0045666","positive regulation of neuron differentiation","12/88","368/14042",3.00090666337554e-06,0.000616346274445853,0.000517158328073951,12,"Adcyap1/Foxa1/Myo5b/Ret/Lmx1a/Foxa2/Ntn1/Neurod2/Tcf4/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0007270","neuron-neuron synaptic transmission","8/88","143/14042",3.07489826497377e-06,0.000616346274445853,0.000517158328073951,8,"Adcyap1/Crhbp/Tac1/Erbb4/Cdh8/Grm2/Nrxn1/Bdnf","BP"
"1","GO:0050808","synapse organization","10/88","256/14042",4.40718977596831e-06,0.000694121077933916,0.000582416915666339,10,"Lmx1a/C1ql1/Epha7/Slitrk6/Erbb4/Lmx1b/Neurod2/Nrxn1/Bdnf/Cbln2","BP"
"1","GO:0050890","cognition","10/88","257/14042",4.56234316314345e-06,0.000694121077933916,0.000582416915666339,10,"Tac1/Lmx1a/C1ql1/Kit/Lmx1b/Neurod2/Nrxn1/Foxb1/Bdnf/Chl1","BP"
"1","GO:0022904","respiratory electron transport chain","6/88","70/14042",4.84717123206197e-06,0.000694121077933916,0.000582416915666339,6,"ND2/ND5/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0006119","oxidative phosphorylation","6/88","71/14042",5.26816858502786e-06,0.000694121077933916,0.000582416915666339,6,"ND2/ND5/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0030900","forebrain development","11/88","324/14042",5.47282241743306e-06,0.000694121077933916,0.000582416915666339,11,"Nr4a2/Pitx2/Lmx1a/Nrp2/Neurod6/Erbb4/Dmrta2/Sema5a/Foxb1/Prdm8/Uchl5","BP"
"1","GO:0030901","midbrain development","5/88","42/14042",6.10754901203542e-06,0.000694121077933916,0.000582416915666339,5,"Lmx1a/Lmx1b/Barhl1/Foxb1/Uchl5","BP"
"1","GO:0007411","axon guidance","8/88","157/14042",6.15628450495713e-06,0.000694121077933916,0.000582416915666339,8,"Lmx1a/Nrp2/Epha7/Ntn1/Sema5a/Bdnf/Etv4/Chl1","BP"
"1","GO:0097485","neuron projection guidance","8/88","159/14042",6.75920249104146e-06,0.000717270664343458,0.000601841063908212,8,"Lmx1a/Nrp2/Epha7/Ntn1/Sema5a/Bdnf/Etv4/Chl1","BP"
"1","GO:0022900","electron transport chain","6/88","75/14042",7.26001666422594e-06,0.000727615003459089,0.000610520699599819,6,"ND2/ND5/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0015980","energy derivation by oxidation of organic compounds","9/88","216/14042",8.14303332420724e-06,0.000773159585098414,0.000648735840454848,9,"ND2/ND1/ND5/ND4/CYTB/COX1/Hmgb1/Bdnf/Ppp1r3c","BP"
"1","GO:0042775","mitochondrial ATP synthesis coupled electron transport","5/88","48/14042",1.19360050080229e-05,0.00104722948993209,0.000878699968795864,5,"ND2/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0033555","multicellular organismal response to stress","6/88","82/14042",1.21905871887882e-05,0.00104722948993209,0.000878699968795864,6,"Nr4a2/Adcyap1/Ret/Tac1/Neurod2/Bdnf","BP"
"1","GO:0007611","learning or memory","9/88","232/14042",1.44498294074571e-05,0.00118488601141148,0.000994203573584846,9,"Tac1/Lmx1a/C1ql1/Kit/Lmx1b/Neurod2/Nrxn1/Foxb1/Bdnf","BP"
"1","GO:0004714","transmembrane receptor protein tyrosine kinase activity","5/88","53/14003",1.97779260090557e-05,0.000604325516943368,0.000525098152521127,5,"Ret/Nrp2/Epha7/Erbb4/Kit","MF"
"1","GO:0048863","stem cell differentiation","7/88","136/14042",2.26297515219811e-05,0.00177495964111539,0.00148931728551986,7,"Pitx2/Foxa1/Ret/Nrp2/Erbb4/Kit/Etv4","BP"
"1","GO:0006935","chemotaxis","11/88","381/14042",2.49884216851694e-05,0.00181939569211787,0.00152660229038715,11,"Scg2/Lmx1a/Nrp2/Epha7/Ntn1/Kit/Sema5a/Hmgb1/Bdnf/Etv4/Chl1","BP"
"1","GO:0045333","cellular respiration","7/88","139/14042",2.60573165539509e-05,0.00181939569211787,0.00152660229038715,7,"ND2/ND1/ND5/ND4/CYTB/COX1/Bdnf","BP"
"1","GO:0042330","taxis","11/88","383/14042",2.62218891325192e-05,0.00181939569211787,0.00152660229038715,11,"Scg2/Lmx1a/Nrp2/Epha7/Ntn1/Kit/Sema5a/Hmgb1/Bdnf/Etv4/Chl1","BP"
"1","GO:0000982","transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding","10/88","316/14003",2.82494602927358e-05,0.000776860158050233,0.000675013419626423,10,"Nr4a2/Pitx2/Foxa1/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Tcf4/Barhl1","MF"
"1","GO:0007612","learning","7/88","144/14042",3.27156386965366e-05,0.00218588934105748,0.00183411650860115,7,"Tac1/C1ql1/Kit/Neurod2/Nrxn1/Foxb1/Bdnf","BP"
"1","GO:0021536","diencephalon development","5/88","60/14042",3.58883986461863e-05,0.00231223825563286,0.00194013222756451,5,"Nr4a2/Pitx2/Nrp2/Sema5a/Foxb1","BP"
"-1","GO:0098793","presynapse","8/57","321/14216",3.90671708773673e-05,0.00397706136250391,0.0032922020476527,8,"Gad2/Gad1/Pdyn/Cckar/Slc32a1/Nrxn3/Cplx1/Cadps2","CC"
"1","GO:0030534","adult behavior","7/88","151/14042",4.43345841229507e-05,0.00272324207308771,0.00228499364050655,7,"Nr4a2/Crhbp/Klhl1/Slitrk6/Foxa2/Nrxn1/Chl1","BP"
"1","GO:0001755","neural crest cell migration","4/88","32/14042",4.52867307054497e-05,0.00272324207308771,0.00228499364050655,4,"Pitx2/Ret/Nrp2/Erbb4","BP"
"1","GO:0061180","mammary gland epithelium development","5/88","64/14042",4.91262688875434e-05,0.00285883190558478,0.0023987631463595,5,"Pthlh/Ntn1/Erbb4/Foxb1/Etv4","BP"
"1","GO:0008361","regulation of cell size","7/88","155/14042",5.23680500081781e-05,0.00295110215896639,0.00247618444660618,7,"Myo5b/Ret/Epha7/Ntn1/Hsp90aa1/Sema5a/Bdnf","BP"
"1","GO:0021537","telencephalon development","8/88","212/14042",5.39835760786534e-05,0.00295110215896639,0.00247618444660618,8,"Lmx1a/Nrp2/Neurod6/Erbb4/Dmrta2/Foxb1/Prdm8/Uchl5","BP"
"1","GO:0016651","oxidoreductase activity, acting on NAD(P)H","5/88","66/14003",5.77694316669951e-05,0.00144423579167488,0.00125489578836439,5,"ND2/ND1/ND5/ND4/ND6","MF"
"1","GO:0060560","developmental growth involved in morphogenesis","8/88","215/14042",5.96063947753586e-05,0.00316264518161021,0.00265368407699584,8,"Myo5b/Nrp2/Pthlh/Epha7/Ntn1/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0030879","mammary gland development","6/88","109/14042",6.15990408805305e-05,0.0031749905642422,0.00266404273041212,6,"Pthlh/Rxfp1/Ntn1/Erbb4/Foxb1/Etv4","BP"
"1","GO:0019199","transmembrane receptor protein kinase activity","5/88","68/14003",6.67221376308171e-05,0.00152904898737289,0.00132858993352592,5,"Ret/Nrp2/Epha7/Erbb4/Kit","MF"
"1","GO:0051961","negative regulation of nervous system development","9/88","284/14042",7.04784940358242e-05,0.00353175564557297,0.00296339398899167,9,"Adcyap1/Lmx1a/Epha7/Foxa2/Ntn1/Erbb4/Neurod2/Sema5a/Bdnf","BP"
"1","GO:0006091","generation of precursor metabolites and energy","9/88","286/14042",7.43805945595884e-05,0.0036265565563648,0.00304293869065969,9,"ND2/ND1/ND5/ND4/CYTB/COX1/Hmgb1/Bdnf/Ppp1r3c","BP"
"-1","GO:0060077","inhibitory synapse","3/57","21/14216",7.72244924758042e-05,0.00397706136250391,0.0032922020476527,3,"Gad2/Gad1/Slc32a1","CC"
"1","GO:0021953","central nervous system neuron differentiation","7/88","165/14042",7.77845602080547e-05,0.00369271964777186,0.00309845422657016,7,"Nr4a2/Lmx1a/Nrp2/Erbb4/Lmx1b/Nrxn1/Prdm8","BP"
"1","GO:0004713","protein tyrosine kinase activity","6/88","116/14003",8.8489660599793e-05,0.00187189666653408,0.00162649011790713,6,"Ret/Nrp2/Epha7/Erbb4/Kit/Hsp90aa1","MF"
"1","GO:0000978","RNA polymerase II core promoter proximal region sequence-specific DNA binding","9/88","295/14003",9.62693180210567e-05,0.0018910044611279,0.00164309287148721,9,"Nr4a2/Pitx2/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Tcf4/Etv4","MF"
"1","GO:0006120","mitochondrial electron transport, NADH to ubiquinone","3/88","15/14042",0.000102478105416551,0.00474026928644764,0.00397742282291498,3,"ND2/ND4/Bdnf","BP"
"1","GO:0000987","core promoter proximal region sequence-specific DNA binding","9/88","303/14003",0.000117970998313607,0.00213116271875409,0.00185176626663035,9,"Nr4a2/Pitx2/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Tcf4/Etv4","MF"
"1","GO:0060562","epithelial tube morphogenesis","9/88","305/14042",0.000121438665498884,0.00538741991682291,0.00452042819488351,9,"Pitx2/Foxa1/Ret/Pthlh/Epha7/Foxa2/Ntn1/Sema5a/Etv4","BP"
"1","GO:0001159","core promoter proximal region DNA binding","9/88","305/14003",0.00012399492181842,0.00213116271875409,0.00185176626663035,9,"Nr4a2/Pitx2/Ebf1/Ebf2/Ebf3/Neurod6/Foxa2/Tcf4/Etv4","MF"
"1","GO:0021854","hypothalamus development","3/88","16/14042",0.000125555880277726,0.00538741991682291,0.00452042819488351,3,"Pitx2/Nrp2/Foxb1","BP"
"1","GO:0030324","lung development","7/88","179/14042",0.00012949658230163,0.00538741991682291,0.00452042819488351,7,"Pitx2/Foxa1/Adamts2/Pthlh/Rxfp1/Foxa2/Hmgb1","BP"
"1","GO:0050807","regulation of synapse organization","6/88","125/14042",0.000131729630475963,0.00538741991682291,0.00452042819488351,6,"Epha7/Slitrk6/Neurod2/Nrxn1/Bdnf/Cbln2","BP"
"1","GO:0050804","modulation of synaptic transmission","9/88","309/14042",0.000134005769397848,0.00538741991682291,0.00452042819488351,9,"Adcyap1/Tac1/Erbb4/Kit/Neurod2/Unc13c/Grm2/Nrxn1/Bdnf","BP"
"1","GO:0042551","neuron maturation","4/88","42/14042",0.0001343868604529,0.00538741991682291,0.00452042819488351,4,"Nr4a2/Ret/C1ql1/Nrxn1","BP"
"1","GO:0030323","respiratory tube development","7/88","182/14042",0.000143575571805707,0.00563065938124991,0.0047245233925997,7,"Pitx2/Foxa1/Adamts2/Pthlh/Rxfp1/Foxa2/Hmgb1","BP"
"1","GO:0050803","regulation of synapse structure or activity","6/88","130/14042",0.000163347754165201,0.00626977337263878,0.00526078545329359,6,"Epha7/Slitrk6/Neurod2/Nrxn1/Bdnf/Cbln2","BP"
"1","GO:0046034","ATP metabolic process","7/88","187/14042",0.000169785699066512,0.00627387435014013,0.00526422646487426,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0021761","limbic system development","5/88","83/14042",0.000170410112614671,0.00627387435014013,0.00526422646487426,5,"Pitx2/Lmx1a/Nrp2/Neurod6/Foxb1","BP"
"1","GO:0051963","regulation of synapse assembly","5/88","84/14042",0.000180308825371026,0.00650554241938663,0.00545861243965339,5,"Epha7/Slitrk6/Nrxn1/Bdnf/Cbln2","BP"
"1","GO:0030285","integral component of synaptic vesicle membrane","3/90","18/14216",0.000186914190753698,0.00887842406080066,0.00747656763014793,3,"Slc17a6/Gabra2/Tmem163","CC"
"1","GO:0030902","hindbrain development","6/88","135/14042",0.000200693595076128,0.00709904402975168,0.00595660247099015,6,"Lmx1a/Klhl1/Foxa2/Lmx1b/Neurod2/Nrxn1","BP"
"1","GO:0021549","cerebellum development","5/88","87/14042",0.000212654344846385,0.00724546633291441,0.00607946118959676,5,"Lmx1a/Klhl1/Lmx1b/Neurod2/Nrxn1","BP"
"1","GO:0048588","developmental cell growth","7/88","194/14042",0.000212865696033517,0.00724546633291441,0.00607946118959676,7,"Myo5b/Nrp2/Epha7/Ntn1/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0050768","negative regulation of neurogenesis","8/88","263/14042",0.000240034779035583,0.00801893965518874,0.00672846027783954,8,"Adcyap1/Lmx1a/Epha7/Foxa2/Ntn1/Erbb4/Sema5a/Bdnf","BP"
"1","GO:0035239","tube morphogenesis","9/88","336/14042",0.000250635294845906,0.00822083767094573,0.0068978670619792,9,"Pitx2/Foxa1/Ret/Pthlh/Epha7/Foxa2/Ntn1/Sema5a/Etv4","BP"
"1","GO:0060541","respiratory system development","7/88","202/14042",0.000272493545880709,0.00867429816277447,0.00727835264212259,7,"Pitx2/Foxa1/Adamts2/Pthlh/Rxfp1/Foxa2/Hmgb1","BP"
"1","GO:0008344","adult locomotory behavior","5/88","92/14042",0.000276170922575041,0.00867429816277447,0.00727835264212259,5,"Nr4a2/Klhl1/Slitrk6/Foxa2/Chl1","BP"
"1","GO:0022604","regulation of cell morphogenesis","10/88","418/14042",0.000278885417650177,0.00867429816277447,0.00727835264212259,10,"Myo5b/Ret/Epha7/Palmd/Ntn1/Kit/Strip2/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0048665","neuron fate specification","3/88","21/14042",0.000291510946259902,0.0088836127546169,0.007453982460695,3,"Foxa1/Foxa2/Dmrta2","BP"
"1","GO:1990138","neuron projection extension","6/88","145/14042",0.000295463838845351,0.0088836127546169,0.007453982460695,6,"Myo5b/Nrp2/Ntn1/Cpne9/Sema5a/Bdnf","BP"
"1","GO:0009205","purine ribonucleoside triphosphate metabolic process","7/88","206/14042",0.000306983201931908,0.00901724884459729,0.00756611263772371,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0014032","neural crest cell development","4/88","52/14042",0.000309905448095916,0.00901724884459729,0.00756611263772371,4,"Pitx2/Ret/Nrp2/Erbb4","BP"
"1","GO:0030672","synaptic vesicle membrane","4/90","52/14216",0.000322425160164232,0.00924967217916016,0.00778919762455593,4,"Slc17a6/Gabra2/Unc13c/Tmem163","CC"
"1","GO:0099501","exocytic vesicle membrane","4/90","52/14216",0.000322425160164232,0.00924967217916016,0.00778919762455593,4,"Slc17a6/Gabra2/Unc13c/Tmem163","CC"
"1","GO:0060074","synapse maturation","3/88","22/14042",0.000336013163672555,0.00942727114311114,0.00791015048651758,3,"Erbb4/Neurod2/Nrxn1","BP"
"1","GO:0022037","metencephalon development","5/88","96/14042",0.000336599430795044,0.00942727114311114,0.00791015048651758,5,"Lmx1a/Klhl1/Lmx1b/Neurod2/Nrxn1","BP"
"1","GO:0009167","purine ribonucleoside monophosphate metabolic process","7/88","210/14042",0.000344900163772359,0.00942727114311114,0.00791015048651758,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0009199","ribonucleoside triphosphate metabolic process","7/88","210/14042",0.000344900163772359,0.00942727114311114,0.00791015048651758,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0098563","intrinsic component of synaptic vesicle membrane","3/90","22/14216",0.000346348207031003,0.00924967217916016,0.00778919762455593,3,"Slc17a6/Gabra2/Tmem163","CC"
"1","GO:0009126","purine nucleoside monophosphate metabolic process","7/88","211/14042",0.000354943431438492,0.0095569843330603,0.00801898907161904,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0009161","ribonucleoside monophosphate metabolic process","7/88","213/14042",0.000375734166274451,0.00996038937348701,0.00835747457058836,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0001667","ameboidal-type cell migration","8/88","282/14042",0.000383689418057072,0.00996038937348701,0.00835747457058836,8,"Pitx2/Ret/Tac1/Nrp2/Erbb4/Kit/Sema5a/Hmgb1","BP"
"1","GO:0009144","purine nucleoside triphosphate metabolic process","7/88","214/14042",0.000386489609835971,0.00996038937348701,0.00835747457058836,7,"ND2/ND5/ND4/CYTB/Adcyap1/COX1/Bdnf","BP"
"1","GO:0033267","axon part","7/90","212/14216",0.000389459881227796,0.00924967217916016,0.00778919762455593,7,"Adcyap1/Slc17a6/Crhbp/Calb2/Unc13c/Nrxn1/Bdnf","CC"


sample_name,protocol,organism,ip,data_source
atac-seq_PE,ATAC-seq,human,,microtest
atac-seq_SE,ATAC-seq,human,,microtest
chip-seq_PE,CHIP-seq,human,H3K27ac,microtest
chip-seq_SE,CHIP-seq,human,H3K27ac,microtest
chipmentation_PE,ChIPmentation,human,H3K27ac,microtest
chipmentation_SE,ChIPmentation,human,H3K27ac,microtest
cpgseq_example_data,CpG-seq,human,,microtest
quant-seq_SE,Quant-seq,human,,microtest
rrbs,RRBS,human,,microtest
rrbs_PE,RRBS,human,,microtest
wgbs,WGBS,human,,microtest
RNA_TRUseq_50SE,SMART,human,,microtest
RNA_SMART_50SE,SMART,human,,microtest
rrbs_PE_fq,RRBS,human,,microtest
rrbs_fq,RRBS,human,,microtest


doi,best_oa_evidence,best_oa_host,best_oa_license,best_oa_url,best_oa_url_is_pdf,best_oa_version,data_standard,doi_url,genre,is_oa,journal_is_oa,journal_issns,journal_name,published_date,publisher
10.1017/pab.2014.10,,,,,False,,2,https://doi.org/10.1017/pab.2014.10,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.11,,,,,False,,1,https://doi.org/10.1017/pab.2014.11,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.12,open (via free pdf),publisher,,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/92E949DFA04AF586E3F23F335CBF8EAF/S0094837314000128a.pdf/div-class-title-shell-ornamentation-as-a-likely-exaptation-evidence-from-predatory-drilling-on-cenozoic-bivalves-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2014.12,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.13,,,,,False,,2,https://doi.org/10.1017/pab.2014.13,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.14,,,,,False,,2,https://doi.org/10.1017/pab.2014.14,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-24,Cambridge University Press (CUP)
10.1017/pab.2014.15,oa repository (via OAI-PMH title and first author match),repository,,https://cloudfront.escholarship.org/dist/prd/content/qt3hj990hq/qt3hj990hq.pdf,True,submittedVersion,2,https://doi.org/10.1017/pab.2014.15,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-02-24,Cambridge University Press (CUP)
10.1017/pab.2014.16,,,,,False,,2,https://doi.org/10.1017/pab.2014.16,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-24,Cambridge University Press (CUP)
10.1017/pab.2014.17,,,,,False,,2,https://doi.org/10.1017/pab.2014.17,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-23,Cambridge University Press (CUP)
10.1017/pab.2014.18,,,,,False,,2,https://doi.org/10.1017/pab.2014.18,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-03-01,Cambridge University Press (CUP)
10.1017/pab.2014.19,open (via free pdf),publisher,,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/3B2D09B130A7D9930BD7C9DFCF4BBF43/S0094837314000190a.pdf/div-class-title-paleoenm-applying-ecological-niche-modeling-to-the-fossil-record-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2014.19,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-03-01,Cambridge University Press (CUP)
10.1017/pab.2014.2,open (via free pdf),publisher,,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/DA41C3B09D9352EEFECF22847797A312/S0094837314000025a.pdf/div-class-title-was-the-ediacaran-cambrian-radiation-a-unique-evolutionary-event-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2014.2,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.20,,,,,False,,2,https://doi.org/10.1017/pab.2014.20,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-03-01,Cambridge University Press (CUP)
10.1017/pab.2014.21,,,,,False,,2,https://doi.org/10.1017/pab.2014.21,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-24,Cambridge University Press (CUP)
10.1017/pab.2014.22,,,,,False,,2,https://doi.org/10.1017/pab.2014.22,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-23,Cambridge University Press (CUP)
10.1017/pab.2014.23,,,,,False,,2,https://doi.org/10.1017/pab.2014.23,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-02-24,Cambridge University Press (CUP)
10.1017/pab.2014.3,oa repository (via OAI-PMH title and first author match),repository,,https://cloudfront.escholarship.org/dist/prd/content/qt3pv0f1w0/qt3pv0f1w0.pdf,True,submittedVersion,2,https://doi.org/10.1017/pab.2014.3,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.4,oa repository (via OAI-PMH title and first author match),repository,,https://dash.harvard.edu/bitstream/handle/1/16953007/77126500.pdf?sequence=1,True,submittedVersion,2,https://doi.org/10.1017/pab.2014.4,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.5,oa repository (via OAI-PMH title and first author match),repository,,https://dash.harvard.edu/bitstream/handle/1/34308891/83711915.pdf?sequence=1,True,submittedVersion,2,https://doi.org/10.1017/pab.2014.5,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.6,,,,,False,,2,https://doi.org/10.1017/pab.2014.6,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.7,,,,,False,,2,https://doi.org/10.1017/pab.2014.7,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.8,,,,,False,,2,https://doi.org/10.1017/pab.2014.8,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2014.9,,,,,False,,2,https://doi.org/10.1017/pab.2014.9,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-01-01,Cambridge University Press (CUP)
10.1017/pab.2015.10,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/874018CECB882EED1D9280C40E1AD3AD/S009483731500010Xa.pdf/div-class-title-phanerozoic-diversity-and-neutral-theory-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.10,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-03-23,Cambridge University Press (CUP)
10.1017/pab.2015.11,,,,,False,,2,https://doi.org/10.1017/pab.2015.11,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-06-01,Cambridge University Press (CUP)
10.1017/pab.2015.12,,,,,False,,2,https://doi.org/10.1017/pab.2015.12,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-06-01,Cambridge University Press (CUP)
10.1017/pab.2015.13,,,,,False,,2,https://doi.org/10.1017/pab.2015.13,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.16,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/03A62B39329A8595DD129EEC9BE8A065/S0094837315000160a.pdf/div-class-title-body-size-trends-of-the-extinct-giant-shark-span-class-italic-carcharocles-megalodon-span-a-deep-time-perspective-on-marine-apex-predators-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.16,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-06-01,Cambridge University Press (CUP)
10.1017/pab.2015.17,,,,,False,,2,https://doi.org/10.1017/pab.2015.17,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-11-06,Cambridge University Press (CUP)
10.1017/pab.2015.18,,,,,False,,2,https://doi.org/10.1017/pab.2015.18,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.19,open (via free pdf),publisher,,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/288407BA0A91914480A0531529F050EF/S0094837315000196a.pdf/div-class-title-span-class-italic-maiasaura-span-a-model-organism-for-extinct-vertebrate-population-biology-a-large-sample-statistical-assessment-of-growth-dynamics-and-survivorship-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.19,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.23,,,,,False,,2,https://doi.org/10.1017/pab.2015.23,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.24,,,,,False,,2,https://doi.org/10.1017/pab.2015.24,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-10-22,Cambridge University Press (CUP)
10.1017/pab.2015.25,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/07262A33436455F2CDC77BB46B596CB9/S0094837315000251a.pdf/div-class-title-the-proterozoic-record-of-eukaryotes-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.25,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.26,,,,,False,,2,https://doi.org/10.1017/pab.2015.26,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.27,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/75CE3A48554DEA5643FDFD64D269BD91/S0094837315000275a.pdf/div-class-title-a-quantitative-comparison-of-dispersed-spore-pollen-and-plant-megafossil-assemblages-from-a-middle-jurassic-plant-bed-from-yorkshire-uk-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.27,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.28,,,,,False,,2,https://doi.org/10.1017/pab.2015.28,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.29,,,,,False,,2,https://doi.org/10.1017/pab.2015.29,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.30,,,,,False,,2,https://doi.org/10.1017/pab.2015.30,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-10-30,Cambridge University Press (CUP)
10.1017/pab.2015.31,,,,,False,,2,https://doi.org/10.1017/pab.2015.31,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-10-26,Cambridge University Press (CUP)
10.1017/pab.2015.32,,,,,False,,2,https://doi.org/10.1017/pab.2015.32,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-09-01,Cambridge University Press (CUP)
10.1017/pab.2015.33,,,,,False,,2,https://doi.org/10.1017/pab.2015.33,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-11-09,Cambridge University Press (CUP)
10.1017/pab.2015.34,,,,,False,,2,https://doi.org/10.1017/pab.2015.34,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-11-06,Cambridge University Press (CUP)
10.1017/pab.2015.35,,,,,False,,2,https://doi.org/10.1017/pab.2015.35,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-11-27,Cambridge University Press (CUP)
10.1017/pab.2015.36,,,,,False,,2,https://doi.org/10.1017/pab.2015.36,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-11-06,Cambridge University Press (CUP)
10.1017/pab.2015.37,,,,,False,,2,https://doi.org/10.1017/pab.2015.37,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-02-19,Cambridge University Press (CUP)
10.1017/pab.2015.38,,,,,False,,2,https://doi.org/10.1017/pab.2015.38,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-02-09,Cambridge University Press (CUP)
10.1017/pab.2015.39,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/4D20F5CAFA1B0AC7033975418668D82B/S0094837315000391a.pdf/div-class-title-the-paleobiology-database-application-programming-interface-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2015.39,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2015-12-23,Cambridge University Press (CUP)
10.1017/pab.2015.40,,,,,False,,2,https://doi.org/10.1017/pab.2015.40,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-09,Cambridge University Press (CUP)
10.1017/pab.2015.41,,,,,False,,2,https://doi.org/10.1017/pab.2015.41,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-02-11,Cambridge University Press (CUP)
10.1017/pab.2015.42,,,,,False,,2,https://doi.org/10.1017/pab.2015.42,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-12-23,Cambridge University Press (CUP)
10.1017/pab.2015.47,,,,,False,,2,https://doi.org/10.1017/pab.2015.47,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-28,Cambridge University Press (CUP)
10.1017/pab.2015.48,,,,,False,,2,https://doi.org/10.1017/pab.2015.48,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-05,Cambridge University Press (CUP)
10.1017/pab.2015.49,,,,,False,,2,https://doi.org/10.1017/pab.2015.49,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-13,Cambridge University Press (CUP)
10.1017/pab.2015.50,,,,,False,,2,https://doi.org/10.1017/pab.2015.50,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-28,Cambridge University Press (CUP)
10.1017/pab.2015.51,,,,,False,,2,https://doi.org/10.1017/pab.2015.51,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-28,Cambridge University Press (CUP)
10.1017/pab.2015.52,,,,,False,,2,https://doi.org/10.1017/pab.2015.52,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-16,Cambridge University Press (CUP)
10.1017/pab.2015.53,,,,,False,,2,https://doi.org/10.1017/pab.2015.53,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-18,Cambridge University Press (CUP)
10.1017/pab.2015.54,,,,,False,,2,https://doi.org/10.1017/pab.2015.54,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-02-01,Cambridge University Press (CUP)
10.1017/pab.2015.55,oa repository (via OAI-PMH doi match),repository,,https://research-information.bristol.ac.uk/files/57326592/Figueirido_Martin_Serra_Janis.pdf,True,submittedVersion,2,https://doi.org/10.1017/pab.2015.55,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2016-05-06,Cambridge University Press (CUP)
10.1017/pab.2015.56,,,,,False,,2,https://doi.org/10.1017/pab.2015.56,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-06,Cambridge University Press (CUP)
10.1017/pab.2015.6,,,,,False,,2,https://doi.org/10.1017/pab.2015.6,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-04-22,Cambridge University Press (CUP)
10.1017/pab.2015.7,,,,,False,,2,https://doi.org/10.1017/pab.2015.7,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-05-04,Cambridge University Press (CUP)
10.1017/pab.2015.8,,,,,False,,2,https://doi.org/10.1017/pab.2015.8,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-04-24,Cambridge University Press (CUP)
10.1017/pab.2015.9,,,,,False,,2,https://doi.org/10.1017/pab.2015.9,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2015-04-27,Cambridge University Press (CUP)
10.1017/pab.2016.1,,,,,False,,2,https://doi.org/10.1017/pab.2016.1,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-28,Cambridge University Press (CUP)
10.1017/pab.2016.11,,,,,False,,2,https://doi.org/10.1017/pab.2016.11,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-21,Cambridge University Press (CUP)
10.1017/pab.2016.12,,,,,False,,2,https://doi.org/10.1017/pab.2016.12,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-05,Cambridge University Press (CUP)
10.1017/pab.2016.13,,,,,False,,2,https://doi.org/10.1017/pab.2016.13,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-03,Cambridge University Press (CUP)
10.1017/pab.2016.14,,,,,False,,2,https://doi.org/10.1017/pab.2016.14,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-10,Cambridge University Press (CUP)
10.1017/pab.2016.15,open (via page says Open Access),publisher,implied-oa,https://www.cambridge.org/core/services/aop-cambridge-core/content/view/A782669273739AFF911B2C87E8A7A262/S0094837316000154a.pdf/div-class-title-ecomorphological-diversifications-of-mesozoic-marine-reptiles-the-roles-of-ecological-opportunity-and-extinction-div.pdf,True,publishedVersion,2,https://doi.org/10.1017/pab.2016.15,journal-article,True,False,"0094-8373,1938-5331",Paleobiology,2016-05-17,Cambridge University Press (CUP)
10.1017/pab.2016.16,,,,,False,,2,https://doi.org/10.1017/pab.2016.16,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-06-27,Cambridge University Press (CUP)
10.1017/pab.2016.19,,,,,False,,2,https://doi.org/10.1017/pab.2016.19,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-18,Cambridge University Press (CUP)
10.1017/pab.2016.2,,,,,False,,2,https://doi.org/10.1017/pab.2016.2,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-03,Cambridge University Press (CUP)
10.1017/pab.2016.20,,,,,False,,2,https://doi.org/10.1017/pab.2016.20,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-25,Cambridge University Press (CUP)
10.1017/pab.2016.24,,,,,False,,2,https://doi.org/10.1017/pab.2016.24,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-08-13,Cambridge University Press (CUP)
10.1017/pab.2016.26,,,,,False,,2,https://doi.org/10.1017/pab.2016.26,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-08-12,Cambridge University Press (CUP)
10.1017/pab.2016.3,,,,,False,,2,https://doi.org/10.1017/pab.2016.3,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-05,Cambridge University Press (CUP)
10.1017/pab.2016.4,,,,,False,,2,https://doi.org/10.1017/pab.2016.4,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-28,Cambridge University Press (CUP)
10.1017/pab.2016.5,,,,,False,,2,https://doi.org/10.1017/pab.2016.5,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-05-06,Cambridge University Press (CUP)
10.1017/pab.2016.6,,,,,False,,2,https://doi.org/10.1017/pab.2016.6,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-03-18,Cambridge University Press (CUP)
10.1017/pab.2016.7,,,,,False,,2,https://doi.org/10.1017/pab.2016.7,journal-article,False,False,"0094-8373,1938-5331",Paleobiology,2016-04-28,Cambridge University Press (CUP)


organism,UniGene,GenBank,symbol,ensembl,entrez
human,Hs.520640,NM_001101,ACTB,ENSG00000075624,60
human,Hs.534255,NM_004048,B2M,ENSG00000166710,567
human,Hs.592355,NM_002046,GAPDH,ENSG00000111640,2597
human,Hs.255230,NM_000181,GUSB,ENSG00000169919,2990
human,Hs.412707,NM_000194,HPRT1,ENSG00000165704,3251
human,Hs.509736,NM_007355,HSP90AB1,ENSG00000096384,3326
human,Hs.2795,NM_005566,LDHA,ENSG00000134333,3939
human,Hs.533282,NM_007363,NONO,ENSG00000147140,4841
human,Hs.78771,NM_000291,PGK1,ENSG00000102144,5230
human,Hs.256639,NM_006347,PPIH,ENSG00000171960,10465
human,Hs.546285,NM_001002,RPLP0,ENSG00000089157,6175
human,Hs.529618,NM_003234,TFRC,ENSG00000072274,7037
mouse,Mm.328431,NM_007393,Actb,ENSMUSG00000029580,11461
mouse,Mm.163,NM_009735,B2m,ENSMUSG00000060802,12010
mouse,Mm.343110,NM_008084,Gapdh,ENSMUSG00000057666,14433
mouse,Mm.3317,NM_010368,Gusb,ENSMUSG00000025534,110006
mouse,Mm.2180,NM_008302,Hsp90ab1,ENSMUSG00000023944,15516
mouse,Mm.29324,NM_010699,Ldha,ENSMUSG00000063229,16828
mouse,Mm.336205,NM_008828,Pgk1,ENSMUSG00000062070,18655
mouse,Mm.371613,NM_028677,Ppih,ENSMUSG00000060288,66101
mouse,Mm.158231,NM_023281,Sdha,ENSMUSG00000021577,66945
mouse,Mm.244820,NM_013684,Tbp,ENSMUSG00000014767,21374
mouse,Mm.28683,NM_011638,Tfrc,ENSMUSG00000022797,22042
mouse,Mm.331,NM_019639,Ubc,ENSMUSG00000008348,22190

OrganismCode,Active,CommonName,Phylum,Class,Order,Family,Genus,Species,Comments,NormalizedCode
1,1,"Chinook Salmon","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Oncorhynchus","tshawytscha",,136
2,1,"Rainbow / Steelhead Trout","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Oncorhynchus","mykiss",,161
3,1,"Striped Bass","Chordata","Osteichthyes","Perciformes","Percichthyidae","Morone","saxatilis",,172
4,1,"White Catfish","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ameiurus","catus",,179
5,1,"Brown Bullhead","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ameiurus","nebulosus",,132
6,1,"Channel Catfish","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ictalurus","punctatus",,135
7,1,"American Shad","Chordata","Osteichthyes","Clupeiformes","Clupeidae","Alosa","sapidissima",,126
8,1,"Threadfin Shad","Chordata","Osteichthyes","Clupeiformes","Clupeidae","Dorosoma","petenense",,175
9,1,"Splittail","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Pogonichthys","macrolepidotus",,169
10,1,"Sacramento Pikeminnow","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Ptychocheilus","grandis",,164
11,1,"Threespine Stickleback","Chordata","Osteichthyes","Gasterosteiformes","Gasterosteidae","Gasterosteus","aculeatus",,171
12,1,"Hardhead","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Mylopharodon","conocephalus",,186
13,1,"Golden Shiner","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Notemigonus","crysoleucas",,141
14,1,"Common Carp","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Cyprinus","carpio",,134
15,1,"Goldfish","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Carassius","auratus",,142
16,1,"Hitch","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Lavinia","exilicauda",,145
17,1,"Sacramento Blackfish","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Orthodon","microlepidotus",,163
18,1,"Black Crappie","Chordata","Osteichthyes","Perciformes","Centrarchidae","Pomoxis","nigromaculatus",,130
19,1,"Green Sunfish","Chordata","Osteichthyes","Perciformes","Centrarchidae","Lepomis","cyanellus",,143
20,1,"Warmouth","Chordata","Osteichthyes","Perciformes","Centrarchidae","Lepomis","gulosus",,183
21,1,"Bluegill","Chordata","Osteichthyes","Perciformes","Centrarchidae","Lepomis","macrochirus",,131
22,1,"Largemouth Bass","Chordata","Osteichthyes","Perciformes","Centrarchidae","Micropterus","salmoides",,148
23,1,"Bigscale Logperch","Chordata","Osteichthyes","Perciformes","Percidae","Percina","macrolepida",,128
24,1,"Tule Perch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Hysterocarpus","traski",,177
25,1,"Longfin Smelt","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Spirinchus","thaleichthys",,149
26,1,"Delta Smelt","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Hypomesus","transpacificus",,138
27,1,"White Sturgeon","Chordata","Osteichthyes","Acipenseriformes","Acipenseridae","Acipenser","transmontanus",,182
28,1,"Green Sturgeon","Chordata","Osteichthyes","Acipenseriformes","Acipenseridae","Acipenser","medirostris",,144
29,1,"Prickly Sculpin","Chordata","Osteichthyes","Scorpaeniformes","Cottidae","Cottus","asper",,159
30,1,"Yellowfin Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Acanthogobius","flavimanus",,184
31,1,"Inland Silverside","Chordata","Osteichthyes","Atheriniformes","Atherinidae","Menidia","beryllina",,146
32,1,"Starry Flounder","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Platichthys","stellatus",,173
33,1,"Lamprey Unknown","Chordata","Cephalaspidomorphi","Petromyzontiformes","Petromyzontidae","Lampetra","NA",,202
34,1,"Western Mosquitofish","Chordata","Osteichthyes","Cyprinodontiformes","Poeciliidae","Gambusia","affinis",,153
35,1,"Yellow Bullhead","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ictalurus","natalis",,191
36,1,"Smallmouth Bass","Chordata","Osteichthyes","Perciformes","Centrarchidae","Micropterus","dolomieu",,188
37,1,"Surf Smelt","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Hypomesus","pretiosus",,174
39,1,"Pacific Staghorn Sculpin","Chordata","Osteichthyes","Scorpaeniformes","Cottidae","Leptocottus","armatus",,170
40,1,"Riffle Sculpin","Chordata","Osteichthyes","Scorpaeniformes","Cottidae","Cottus","gulosus",,222
41,1,"White Crappie","Chordata","Osteichthyes","Perciformes","Centrarchidae","Pomoxis","annularis",,180
42,1,"Pacific Herring","Chordata","Osteichthyes","Clupeiformes","Clupeidae","Clupea","pallasi",,157
43,1,"Yellow Perch","Chordata","Osteichthyes","Perciformes","Percidae","Perca","flavescens",,
44,1,"Black Bullhead","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ameiurus","melas",,129
45,1,"Sacramento Perch","Chordata","Osteichthyes","Perciformes","Centrarchidae","Archoplites","interruptus",,214
46,1,"Tui Chub","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Gila","bicolor",,219
47,1,"Coho Salmon","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Oncorhynchus","kisutch",,
48,1,"Pacific Brook Lamprey","Chordata","Cephalaspidomorphi","Petromyzontiformes","Petromyzontidae","Lampetra","pacifica",,
49,1,"Redear Sunfish","Chordata","Osteichthyes","Perciformes","Centrarchidae","Lepomis","microlophus",,162
50,1,"Sacramento Sucker","Chordata","Osteichthyes","Cypriniformes","Catostomidae","Catostomus","occidentalis",,165
51,1,"Fathead Minnow","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Pimephales","promelas",,140
52,1,"California Roach","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Hesperoleucus","symmetricus",,185
53,1,"Speckled Dace","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Rhinichthys","osculus",,221
54,1,"Pumpkinseed","Chordata","Osteichthyes","Perciformes","Centrarchidae","Lepomis","gibbosus",,210
55,1,"Blue Catfish","Chordata","Osteichthyes","Siluriformes","Ictaluridae","Ictalurus","furcatus",,
60,1,"White Bass","Chordata","Osteichthyes","Perciformes","Percichthyidae","Morone","Chrysops",,
61,1,"Chameleon Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Tridentiger","trigonocephalus",,197
62,1,"Pink Salmon","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Oncorhynchus","gorbuscha",,
63,1,"Freshwater Eel","Chordata","Osteichthyes","Anguilliformes","Anguillidae","Anguilla","rostrata",,
64,1,"Red Shiner","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Cyprinella","lutrensis",,187
65,1,"Wakasagi","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Hypomesus","nipponensis",,178
66,1,"Shimofuri Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Tridentiger","bifasciatus",,167
67,1,"Rainwater Killifish","Chordata","Osteichthyes","Cyprinodontiformes","Cyprinodontidae","Lucania","parva",,147
68,1,"Northern Pike","Chordata","Osteichthyes","Esociformes","Esocidae","Esox","lucius",,
69,1,"Shokihaze Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Tridentiger","barbatus",,
70,1,"Spotted Bass","Chordata","Osteichthyes","Perciformes","Centrarchidae","Micropterus","punctulatus",,213
71,1,"Large-Scale Loach","Chordata","Osteichthyes","dabryanus","cobitidae","Paramisgurnus","dabryanus","Added on February 21, 2017",263
80,1,"Chinese Mitten Crab","Arthropoda","Crustacea","Decapoda","Grapsidae","Eriocheir","sinensis",,139
81,1,"Chinese Mitten Crab Temp.","NA","NA","NA","NA","NA","NA",,139
90,1,"Unknown","NA","NA","NA","NA","NA","unknown",,190
98,1,"Total Fish Count","NA","NA","NA","NA","NA","Total",,
99,1,"Total Fish Estimate","NA","NA","NA","NA","NA","Estimate",,
117,1,"Striped Mullet","Chordata","Osteichthyes","Perciformes","Mugilidae","Mugil","cephalus",,212
127,0,"Bay Pipefish","Chordata","Osteichthyes","Gasterosteiformes","Syngnathidae","Syngnathus","leptorhynchus",,127
133,0,"California Halibut","Chordata","Osteichthyes","Pleuronectiformes","Bothidae","Paralichthys","californicus",,133
137,0,"California Bay Shrimp","Arthropoda","Crustacea","Decapoda","Crangonidae","Crangon","franciscorum",,137
150,0,"Longjaw Mudsucker","Chordata","Osteichthyes","Percifomes","Gobiidae","Gillichthys","mirabilis",,150
151,0,"Black Sea Jellyfish","Cnidaria","Hydrozoa","Limnomedusae","Olindiadidae","Maeotias","inexpectata",,151
152,0,"Plainfin Midshipman","Chordata","Osteichthyes","Batrachoidiformes","Batrachoididae","Porichthys","notatus",,152
154,0,"Opossum Shrimp","Arthropoda","Crustacea","Malacostraca","Mysidae","neomysis","NA",,154
155,0,"Northern Anchovy","Chordata","Osteichthyes","Clupeiformes","Engraulidae","Engraulis","mordax",,155
156,0,"Bay Shrimp","Arthropoda","Crustacea","Euphausiacea","Palaemonidae","Palaemon","macrodactylum",,156
158,1,"Pacific Lamprey","Chordata","Cephalaspidomorphi","Petromyzontiformes","Petromyzontidae","Lampetra","tridentata",,158
160,0,"Asian Clam","Mollusca","Bivalvia","Myodia","Sphaeriidae","Potamocorbula","amurenis",,160
166,0,"Speckled Sanddab","Chordata","Osteichthyes","Pleuronectiformes","Bothidae","Citharichthys","stigmaeus",,166
168,0,"Shiner perch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Cymatogaster","aggregata",,168
176,0,"Topsmelt","Chordata","Osteichthyes","Atheriniformes","Atherinidae","Atherinops","affinis",,176
181,0,"White Croaker","Chordata","Osteichthyes","Perciformes","Sciaenidae","Genyonemus","lineatus",,181
192,0,"Bass Unknown","Chordata","Osteichthyes","Perciformes","Centrarchidae","Micropterus","NA",,192
193,0,"Sculpin Unknown","Chordata","Osteichthyes","Scorpaeniformes","Cottidae","NA","NA",,193
194,0,"Bay Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Lepidogobius","lepidus",,194
195,0,"Barred Surfperch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Amphistichus","argenteus",,195
196,0,"Brown Trout","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Salmo","trutta",,196
198,0,"Diamond Turbot","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Hypsopsetta","guttulata",,198
199,0,"English Sole","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Pleuronectes","vetulus",,199
200,0,"Goby Unknown","Chordata","Osteichthyes","Perciformes","Gobiidae","NA","NA",,200
201,0,"Jacksmelt","Chordata","Osteichthyes","Atheriniformes","Atherinidae","Atherinopsis","californiensis",,201
202,0,"Kern Brook Lamprey","Chordata","Cephalaspidomorphi","Petromyzontiformes","Petromyzontidae","Lampetra","hubbsi",,
203,0,"Minnow Unknown","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","NA","NA",,203
204,0,"Perch Unknown","Chordata","Osteichthyes","Perciformes","Percidae","NA","NA",,204
205,0,"Righteye Flounder Unknown","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","NA","NA",,205
206,0,"Rosyface Shinner","Chordata","Osteichthyes","Cypriniformes","Cyprinidae","Notropis","rubellus",,206
207,0,"Rockfish Unknown","Chordata","Osteichthyes","Scorpaeniformes","Scorpaenidae","NA","NA",,207
208,0,"River Lamprey","Chordata","Cephalaspidomorphi","Petromyzontiformes","Petromyzontidae","Lampetra","ayresi",,208
211,0,"Smelt Unknown","Chordata","Osteichthyes","Salmoniformes","Osmeridae","NA","NA",,211
215,0,"Sturgeon Unknown","Chordata","Osteichthyes","Acipenseriformes","Acipenseridae","Acipenser","NA",,215
216,0,"Sunfish Unknown","Chordata","Osteichthyes","Perciformes","Centrarchidae","NA","NA",,216
217,0,"Sucker Unknown","Chordata","Osteichthyes","Cypriniformes","Catostomidae","NA","NA",,217
218,0,"Silver Perch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Hyperprosopon","ellipticum",,218
220,0,"NoCatch","NA","NA","NA","NA","NA","nocatch",,220
223,0,"Walleye Surfperch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Hyperprosopon","Argenteum",,223
224,0,"Callico Serf Perch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Amphistichus","koelzi",,224
225,0,"Brown Smoothhound","Chordata","Elasmobranchiomorphi","Lamniformes","Carcharhinidae","Mustelus","henlei",,225
226,0,"Leopard Shark","Chordata","Elasmobranchiomorphi","Lamniformes","Carcharhinidae","Triakis","semifasciata",,226
227,0,"Arrow Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Clevelandia","ios",,227
228,0,"Pacific Sanddab","Chordata","Osteichthyes","Pleuronectiformes","Bothidae","Citharichthys","sordidus",,228
230,0,"Bat Ray","Chordata","Elasmobranchiomorphi","Rajiformes","Mobulidae","Myliobatis","californica",,230
231,0,"Big Skate","Chordata","Elasmobranchiomorphi","Rajiformes","Rajidae","Raja","binoculata",,231
232,0,"Pacific Butterfish","Chordata","Osteichthyes","Perciformes","Stromateidae","Peprilus","simillimus",,232
233,0,"Pacific Tomcod","Chordata","Osteichthyes","Gadiformes","Gadidae","Microgadus","proximus",,233
235,0,"Night Smelt","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Spirinchus","starski",,235
236,0,"Whitebait Smelt","Chordata","Osteichthyes","Salmoniformes","Osmeridae","Allosmerus","elongatus",,236
237,0,"Pile Perch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Rhacochilus","vacca",,237
238,0,"Black Perch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Embiotoca","jacksoni",,238
240,0,"Sevengill Shark","Chordata","Elasmobranchiomorphi","Hexanchiformes","Hexanchidae","Notorynchus","maculatus",,240
241,0,"Spiny Dogfish","Chordata","Elasmobranchiomorphi","Squaliformes","Squalidae","Squalus","acanthias",,241
242,0,"Grey Smoothhound","Chordata","Elasmobranchiomorphi","Lamniformes","Carcharhinidae","Mustelus","californica",,242
243,0,"Rubberlip Surfperch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Rhacochilus","toxotes",,243
244,0,"Pacific Halibut","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Hippoglossus","stenolepis",,244
245,0,"Sand Sole","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Psettichthys","melanostictus",,245
246,0,"Flatfish","Chordata","Osteichthyes","Pleuronectiformes","NA","NA","NA",,246
247,0,"Rock Sole","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Lepidopsetta","bilineatta",,247
248,0,"Lingcod","Chordata","Osteichthyes","Scorpaeniformes","Hexagrammidae","Ophiodon","elongatus",,248
249,0,"Wolf-eel","Chordata","Osteichthyes","Percifomes","Anarhichadidae","Anarrhichthys","ocellantus",,249
250,0,"Spotfin Surfperch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Hyperprosopon","anale",,250
251,0,"White Perch","Chordata","Osteichthyes","Percifomes","Embiotocidae","Phanerodon","furactus",,251
252,0,"Pacific Electric Ray","Chordata","Elasmobranchiomorphi","Rajiformes","Torpedinidae","Torpedo","californica",,252
253,0,"Pacific sardine","Chordata","Osteichthyes","Clupeiformes","Clupeidae","Sardinops","sagax",,253
254,0,"Dwarf Surfperch","Chordata","Osteichthyes","Perciformes","Embiotocidae","Micrometrus","minimus",,254
255,0,"Butter Sole","Chordata","Osteichthyes","Pleuronectiformes","Pleuronectidae","Isopsetta","NA",,255
256,0,"Redeye Bass","Chordata","Osteichthyes","Perciformes","Centrarchidae","Micropterus","coosae",,256
257,0,"Cheekspot Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Llypnus","gilberti",,257
258,0,"Kokanee Salmon","Chordata","Osteichthyes","Salmoniformes","Salmonidae","Oncorhynchus","nerka",,258
259,0,"Herring Unknown","Chordata","Osteichthyes","Clupeiformes","Clupeidae","NA","NA",,259
260,0,"Catfish Unknown","Chordata","Osteichthyes","Siluriformes","Ictaluridae","NA","NA",,260
261,0,"Tidewater Goby","Chordata","Osteichthyes","Perciformes","Gobiidae","Eucyclogobius","newberryi",,261
262,0,"Silversides Unknown","Chordata","Osteichthyes","Atheriniformes","Atherinidae","NA","NA",,262


term_ID,description,frequency,plot_X,plot_Y,plot_size,uniqueness,dispensability,representative,eliminated
GO:0002252,immune_effector_process,0.185%,0.751,-0.132,4.375,0.984,0.0,2252,0
GO:0002376,immune_system_process,0.600%,0.871,0.182,4.886,0.991,0.0,2376,0
GO:0007155,cell_adhesion,0.544%,0.735,0.058,4.844,0.991,0.0,7155,0
GO:0009605,response_to_external_stimulus,1.370%,2.348,-2.016,5.245,0.954,0.0,9605,0
GO:0009987,cellular_process,63.780%,0.925,-0.032,6.913,0.997,0.0,9987,0
GO:0032259,methylation,3.103%,1.832,0.186,5.6,0.971,0.0,32259,0
GO:0043953,protein_transport_by_the_Tat_complex,0.073%,4.414,3.816,3.974,0.898,0.0,43953,0
GO:0048511,rhythmic_process,0.077%,1.784,0.156,3.994,0.991,0.0,48511,0
GO:0055062,phosphate_ion_homeostasis,0.035%,3.994,-1.417,3.653,0.908,0.0,55062,0
GO:0030320,cellular_monovalent_inorganic_anion_homeostasis,0.036%,,,3.668,0.78,0.991,55062,1
GO:0030002,cellular_anion_homeostasis,0.036%,,,3.668,0.78,0.971,55062,1
GO:0030643,cellular_phosphate_ion_homeostasis,0.033%,,,3.632,0.781,0.997,55062,1
GO:0017144,drug_metabolic_process,0.058%,0.998,0.261,3.868,0.929,0.013,17144,0
GO:0042157,lipoprotein_metabolic_process,0.210%,0.805,-1.236,4.431,0.931,0.014,42157,0
GO:0071555,cell_wall_organization,0.709%,1.075,-3.083,4.959,0.888,0.026,71555,0
GO:0009252,peptidoglycan_biosynthetic_process,0.533%,,,4.835,0.659,0.906,71555,1
GO:0009058,biosynthetic_process,31.611%,1.629,0.332,6.608,0.965,0.03,9058,0
GO:0015977,carbon_fixation,0.036%,-0.853,2.015,3.664,0.866,0.032,15977,0
GO:0017000,antibiotic_biosynthetic_process,0.028%,-1.238,-1.301,3.56,0.876,0.038,17000,0
GO:0007154,cell_communication,7.219%,0.686,0.105,5.967,0.935,0.043,7154,0
GO:0015979,photosynthesis,0.183%,0.817,0.178,4.37,0.923,0.043,15979,0
GO:0043158,heterocyst_differentiation,0.002%,-0.158,1.923,2.386,0.864,0.043,43158,0
GO:0019684,"photosynthesis,_light_reaction",0.069%,0.647,-0.204,3.947,0.905,0.044,19684,0
GO:0000103,sulfate_assimilation,0.084%,-0.072,0.305,4.033,0.903,0.044,103,0
GO:0052803,imidazole-containing_compound_metabolic_process,0.420%,-4.698,-4.354,4.732,0.794,0.051,52803,0
GO:0010304,PSII_associated_light-harvesting_complex_II_catabolic_process,0.001%,-0.184,-1.994,1.991,0.912,0.063,10304,0
GO:0052889,"9,9'-di-cis-zeta-carotene_desaturation_to_7,9,7',9'-tetra-cis-lycopene",0.003%,-1.443,3.633,2.566,0.815,0.088,52889,0
GO:0046148,pigment_biosynthetic_process,0.448%,-2.822,3.396,4.76,0.822,0.118,46148,0
GO:0051301,cell_division,1.230%,-3.732,4.71,5.198,0.793,0.126,51301,0
GO:0006662,glycerol_ether_metabolic_process,0.122%,-5.574,4.731,4.193,0.766,0.13,6662,0
GO:0051188,cofactor_biosynthetic_process,2.763%,-3.846,-1.595,5.55,0.772,0.143,51188,0
GO:0032465,regulation_of_cytokinesis,0.064%,-0.703,2.718,3.917,0.777,0.165,32465,0
GO:0032955,regulation_of_barrier_septum_assembly,0.025%,,,3.507,0.746,0.907,32465,1
GO:0032954,regulation_of_cytokinetic_process,0.043%,,,3.739,0.783,0.939,32465,1
GO:0006474,N-terminal_protein_amino_acid_acetylation,0.035%,0.006,-4.396,3.651,0.893,0.169,6474,0
GO:0019632,shikimate_metabolic_process,0.023%,-5.315,4.667,3.476,0.737,0.213,19632,0
GO:0055114,oxidation-reduction_process,15.060%,-4.53,5.502,6.286,0.784,0.215,55114,0
GO:0051174,regulation_of_phosphorus_metabolic_process,0.580%,0.531,-0.933,4.872,0.773,0.217,51174,0
GO:0006814,sodium_ion_transport,0.305%,5.155,4.058,4.592,0.875,0.22,6814,0
GO:0007049,cell_cycle,1.885%,-3.825,4.364,5.384,0.785,0.223,7049,0
GO:1901137,carbohydrate_derivative_biosynthetic_process,3.651%,-4.246,-1.981,5.671,0.763,0.228,1901137,0
GO:0018904,ether_metabolic_process,0.124%,-5.478,4.562,4.201,0.766,0.239,18904,0
GO:0070681,glutaminyl-tRNAGln_biosynthesis_via_transamidation,0.011%,-6.465,0.161,3.154,0.704,0.253,70681,0
GO:0006106,fumarate_metabolic_process,0.049%,-5.47,4.856,3.801,0.722,0.277,6106,0
GO:0072527,pyrimidine-containing_compound_metabolic_process,1.037%,-4.453,-3.775,5.124,0.778,0.282,72527,0
GO:0006767,water-soluble_vitamin_metabolic_process,1.215%,-5.912,4.693,5.193,0.711,0.289,6767,0
GO:0042364,water-soluble_vitamin_biosynthetic_process,1.160%,,,5.173,0.608,0.98,6767,1
GO:0072528,pyrimidine-containing_compound_biosynthetic_process,0.902%,-5.462,-3.245,5.063,0.696,0.305,72528,0
GO:0018298,protein-chromophore_linkage,0.095%,0.31,-5.184,4.084,0.885,0.317,18298,0
GO:0032784,"regulation_of_DNA-templated_transcription,_elongation",0.150%,-2.18,-5.083,4.284,0.731,0.326,32784,0
GO:0010966,regulation_of_phosphate_transport,0.002%,4.887,2.474,2.32,0.858,0.33,10966,0
GO:0045936,negative_regulation_of_phosphate_metabolic_process,0.182%,1.955,-0.891,4.368,0.77,0.331,45936,0
GO:0006304,DNA_modification,0.339%,-2.121,-6.477,4.639,0.808,0.332,6304,0
GO:0071214,cellular_response_to_abiotic_stimulus,0.113%,2.586,-2.069,4.162,0.92,0.333,71214,0
GO:0006527,arginine_catabolic_process,0.051%,-6.001,3.202,3.817,0.685,0.342,6527,0
GO:0072350,tricarboxylic_acid_metabolic_process,0.497%,-5.846,5.332,4.805,0.683,0.343,72350,0
GO:0018065,protein-cofactor_linkage,0.126%,-0.001,-4.816,4.209,0.883,0.346,18065,0
GO:0015970,guanosine_tetraphosphate_biosynthetic_process,0.001%,-5.713,0.271,2.104,0.681,0.349,15970,0
GO:0044249,cellular_biosynthetic_process,30.048%,-4.347,-2.452,6.586,0.771,0.349,44249,0
GO:0045903,positive_regulation_of_translational_fidelity,0.005%,-2.039,-3.955,2.842,0.748,0.368,45903,0
GO:0006810,transport,17.616%,5.105,4.153,6.354,0.886,0.378,6810,0
GO:0002790,peptide_secretion,0.041%,4.276,3.876,3.72,0.839,0.38,2790,0
GO:0006935,chemotaxis,0.475%,1.733,-1.875,4.785,0.947,0.383,6935,0
GO:0006952,defense_response,0.568%,1.704,-1.893,4.863,0.951,0.39,6952,0
GO:0072348,sulfur_compound_transport,0.249%,4.663,4.036,4.504,0.835,0.391,72348,0
GO:2001061,D-glycero-D-manno-heptose_7-phosphate_biosynthetic_process,0.008%,-2.196,-0.805,3.007,0.779,0.406,2001061,0
GO:0043571,maintenance_of_CRISPR_repeat_elements,0.052%,-1.08,-5.645,3.827,0.802,0.411,43571,0
GO:0090407,organophosphate_biosynthetic_process,4.110%,-4.278,-1.747,5.722,0.683,0.415,90407,0
GO:0018193,peptidyl-amino_acid_modification,1.495%,0.398,-6.387,5.283,0.857,0.434,18193,0
GO:0044255,cellular_lipid_metabolic_process,2.704%,-4.471,5.489,5.54,0.72,0.459,44255,0
GO:0001510,RNA_methylation,0.739%,-2.618,-5.927,4.977,0.801,0.46,1510,0
GO:0006884,cell_volume_homeostasis,0.009%,0.577,-1.03,3.039,0.78,0.465,6884,0
GO:0042372,phylloquinone_biosynthetic_process,0.006%,-5.701,3.066,2.915,0.709,0.467,42372,0
GO:0009196,pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process,0.043%,-5.497,1.583,3.741,0.639,0.478,9196,0
GO:0009139,pyrimidine_nucleoside_diphosphate_biosynthetic_process,0.043%,,,3.742,0.601,0.996,9196,1
GO:0006233,dTDP_biosynthetic_process,0.043%,,,3.737,0.575,0.997,9196,1
GO:0009189,deoxyribonucleoside_diphosphate_biosynthetic_process,0.043%,,,3.741,0.601,0.998,9196,1
GO:0009197,pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process,0.043%,,,3.741,0.601,0.999,9196,1
GO:0046072,dTDP_metabolic_process,0.043%,,,3.737,0.61,0.998,9196,1
GO:0032787,monocarboxylic_acid_metabolic_process,2.485%,-5.926,5.263,5.504,0.636,0.492,32787,0
GO:1901566,organonitrogen_compound_biosynthetic_process,14.064%,-5.793,-3.231,6.256,0.709,0.498,1901566,0
GO:0046903,secretion,0.810%,4.476,4.181,5.017,0.818,0.499,46903,0
GO:0006950,response_to_stress,4.575%,1.765,-1.921,5.769,0.949,0.501,6950,0
GO:0008360,regulation_of_cell_shape,0.640%,-1.361,1.277,4.914,0.699,0.503,8360,0
GO:0006355,"regulation_of_transcription,_DNA-templated",9.917%,-3.137,-4.119,6.105,0.611,0.509,6355,0
GO:0015074,DNA_integration,0.682%,-2.73,-6.044,4.942,0.807,0.51,15074,0
GO:0006313,"transposition,_DNA-mediated",0.413%,-4.814,-0.923,4.724,0.753,0.519,6313,0
GO:0009066,aspartate_family_amino_acid_metabolic_process,0.828%,-6.598,2.86,5.026,0.623,0.521,9066,0
GO:0008616,queuosine_biosynthetic_process,0.146%,-6.346,0.291,4.271,0.608,0.526,8616,0
GO:0006431,methionyl-tRNA_aminoacylation,0.055%,-5.881,-0.887,3.845,0.652,0.534,6431,0
GO:0009208,pyrimidine_ribonucleoside_triphosphate_metabolic_process,0.145%,-5.588,1.416,4.268,0.627,0.538,9208,0
GO:0009148,pyrimidine_nucleoside_triphosphate_biosynthetic_process,0.215%,,,4.441,0.57,0.944,9208,1
GO:0070814,hydrogen_sulfide_biosynthetic_process,0.058%,-2.112,-1.223,3.875,0.84,0.541,70814,0
GO:0006090,pyruvate_metabolic_process,0.817%,-5.556,4.861,5.021,0.661,0.547,6090,0
GO:0000160,phosphorelay_signal_transduction_system,2.570%,3.219,-1.735,5.518,0.788,0.547,160,0
GO:0043570,maintenance_of_DNA_repeat_elements,0.064%,-1.16,-5.662,3.914,0.799,0.557,43570,0
GO:0009088,threonine_biosynthetic_process,0.126%,-6.753,2.477,4.208,0.624,0.557,9088,0
GO:0022607,cellular_component_assembly,2.484%,1.556,-3.476,5.503,0.873,0.563,22607,0
GO:0006820,anion_transport,1.956%,5.224,4.162,5.4,0.867,0.57,6820,0
GO:0016116,carotenoid_metabolic_process,0.031%,-2.722,4.768,3.597,0.781,0.577,16116,0
GO:0016109,tetraterpenoid_biosynthetic_process,0.030%,,,3.583,0.708,0.998,16116,1
GO:0016117,carotenoid_biosynthetic_process,0.030%,,,3.583,0.691,0.998,16116,1
GO:0051051,negative_regulation_of_transport,0.089%,4.85,2.022,4.059,0.844,0.578,51051,0
GO:0006412,translation,5.686%,-5.063,-3.774,5.863,0.661,0.585,6412,0
GO:0046654,tetrahydrofolate_biosynthetic_process,0.101%,-6.314,0.945,4.113,0.615,0.59,46654,0
GO:0009107,lipoate_biosynthetic_process,0.066%,-6.481,2.095,3.926,0.597,0.594,9107,0
GO:0006430,lysyl-tRNA_aminoacylation,0.057%,-5.886,-0.881,3.867,0.651,0.596,6430,0
GO:0006310,DNA_recombination,1.641%,-3.164,-6.023,5.323,0.792,0.598,6310,0
GO:0046501,protoporphyrinogen_IX_metabolic_process,0.116%,-4.724,-3.072,4.174,0.76,0.598,46501,0
GO:0051302,regulation_of_cell_division,0.083%,-0.686,2.872,4.026,0.788,0.601,51302,0
GO:0046040,IMP_metabolic_process,0.418%,-5.936,0.466,4.73,0.583,0.604,46040,0
GO:0006605,protein_targeting,0.694%,4.468,3.904,4.949,0.889,0.609,6605,0
GO:0006811,ion_transport,5.344%,5.029,4.08,5.836,0.898,0.609,6811,0
GO:0006432,phenylalanyl-tRNA_aminoacylation,0.094%,-5.923,-0.85,4.082,0.639,0.618,6432,0
GO:0006108,malate_metabolic_process,0.088%,-5.51,4.888,4.051,0.711,0.62,6108,0
GO:0009138,pyrimidine_nucleoside_diphosphate_metabolic_process,0.044%,-5.576,1.614,3.752,0.655,0.637,9138,0
GO:0009106,lipoate_metabolic_process,0.066%,-6.092,3.033,3.927,0.638,0.641,9106,0
GO:0034036,purine_ribonucleoside_bisphosphate_biosynthetic_process,0.001%,-5.83,0.35,2.223,0.684,0.642,34036,0
GO:0046394,carboxylic_acid_biosynthetic_process,4.159%,-6.399,3.203,5.727,0.546,0.644,46394,0
GO:0008652,cellular_amino_acid_biosynthetic_process,2.932%,,,5.575,0.532,0.908,46394,1
GO:0022618,ribonucleoprotein_complex_assembly,0.364%,1.685,-3.623,4.669,0.878,0.644,22618,0
GO:0042255,ribosome_assembly,0.164%,,,4.322,0.883,0.924,22618,1
GO:0015991,ATP_hydrolysis_coupled_proton_transport,0.163%,5.254,4.227,4.321,0.801,0.644,15991,0
GO:0009133,nucleoside_diphosphate_biosynthetic_process,0.052%,-6.025,0.681,3.822,0.613,0.645,9133,0
GO:0034766,negative_regulation_of_ion_transmembrane_transport,0.012%,4.95,2.333,3.171,0.833,0.648,34766,0
GO:0071826,ribonucleoprotein_complex_subunit_organization,0.377%,1.792,-3.718,4.685,0.889,0.653,71826,0
GO:0044283,small_molecule_biosynthetic_process,5.677%,-6.304,2.41,5.862,0.611,0.654,44283,0
GO:0010205,photoinhibition,0.001%,3.35,-1.554,1.978,0.784,0.659,10205,0
GO:0015711,organic_anion_transport,1.192%,4.506,3.923,5.184,0.851,0.663,15711,0
GO:0031564,transcription_antitermination,0.076%,-2.484,-2.92,3.987,0.674,0.666,31564,0
GO:0070925,organelle_assembly,0.571%,1.083,-3.113,4.865,0.883,0.677,70925,0
GO:0006541,glutamine_metabolic_process,0.472%,-6.264,2.902,4.782,0.636,0.682,6541,0
GO:0009423,chorismate_biosynthetic_process,0.191%,-6.011,3.325,4.389,0.64,0.683,9423,0
GO:0044272,sulfur_compound_biosynthetic_process,1.235%,-3.454,-1.802,5.2,0.798,0.685,44272,0
GO:0006281,DNA_repair,2.234%,-2.102,-6.046,5.457,0.745,0.688,6281,0
GO:0030001,metal_ion_transport,1.677%,4.519,3.869,5.333,0.863,0.691,30001,0
GO:0000105,histidine_biosynthetic_process,0.360%,-6.356,1.04,4.664,0.595,0.691,105,0
GO:0006547,histidine_metabolic_process,0.420%,,,4.731,0.636,0.982,105,1
GO:0046488,phosphatidylinositol_metabolic_process,0.339%,-4.119,4.164,4.638,0.67,0.694,46488,0
GO:0019464,glycine_decarboxylation_via_glycine_cleavage_system,0.080%,-5.968,3.162,4.01,0.678,0.699,19464,0
GO:0070838,divalent_metal_ion_transport,0.358%,4.85,3.97,4.662,0.872,0.704,70838,0
GO:0006816,calcium_ion_transport,0.197%,,,4.404,0.878,0.93,70838,1
GO:0010206,photosystem_II_repair,0.002%,0.756,-3.547,2.502,0.893,0.704,10206,0
GO:0008272,sulfate_transport,0.150%,4.651,3.991,4.284,0.81,0.706,8272,0
GO:0009234,menaquinone_biosynthetic_process,0.107%,-6.218,3.096,4.136,0.653,0.724,9234,0
GO:0009073,aromatic_amino_acid_family_biosynthetic_process,0.540%,-6.842,0.918,4.841,0.583,0.725,9073,0
GO:0046390,ribose_phosphate_biosynthetic_process,1.778%,-4.357,-1.924,5.358,0.669,0.725,46390,0
GO:0071806,protein_transmembrane_transport,0.525%,4.945,4.059,4.829,0.884,0.726,71806,0
GO:0006084,acetyl-CoA_metabolic_process,0.172%,-2.325,0.006,4.343,0.769,0.731,6084,0
GO:0019253,reductive_pentose-phosphate_cycle,0.005%,-3.637,0.988,2.82,0.772,0.734,19253,0
GO:0016108,tetraterpenoid_metabolic_process,0.031%,-2.703,4.843,3.597,0.785,0.734,16108,0
GO:0009065,glutamine_family_amino_acid_catabolic_process,0.117%,-6.415,3.36,4.177,0.667,0.741,9065,0
GO:0046129,purine_ribonucleoside_biosynthetic_process,0.923%,-6.234,0.318,5.073,0.54,0.748,46129,0
GO:0006164,purine_nucleotide_biosynthetic_process,1.409%,,,5.257,0.505,0.964,46129,1
GO:0009145,purine_nucleoside_triphosphate_biosynthetic_process,0.485%,,,4.794,0.549,0.929,46129,1
GO:0009152,purine_ribonucleotide_biosynthetic_process,1.337%,,,5.234,0.5,0.919,46129,1
GO:0006754,ATP_biosynthetic_process,0.432%,,,4.743,0.525,0.916,46129,1
GO:0015986,ATP_synthesis_coupled_proton_transport,0.411%,,,4.722,0.439,0.97,46129,1
GO:0009206,purine_ribonucleoside_triphosphate_biosynthetic_process,0.485%,,,4.794,0.548,0.984,46129,1
GO:0009260,ribonucleotide_biosynthetic_process,1.734%,,,5.347,0.501,0.946,46129,1
GO:0006561,proline_biosynthetic_process,0.163%,-6.438,1.162,4.321,0.612,0.749,6561,0
GO:0032940,secretion_by_cell,0.763%,0.257,6.153,4.991,0.718,0.754,32940,0
GO:0009306,protein_secretion,0.529%,,,4.832,0.71,0.944,32940,1
GO:0009124,nucleoside_monophosphate_biosynthetic_process,1.486%,-6.058,0.329,5.28,0.518,0.755,9124,0
GO:0009165,nucleotide_biosynthetic_process,2.562%,,,5.517,0.497,0.903,9124,1
GO:0006614,SRP-dependent_cotranslational_protein_targeting_to_membrane,0.138%,1.388,4.54,4.249,0.704,0.756,6614,0
GO:0034220,ion_transmembrane_transport,3.528%,4.548,3.895,5.656,0.854,0.762,34220,0
GO:0051607,defense_response_to_virus,0.098%,1.886,-1.922,4.098,0.938,0.769,51607,0
GO:0006418,tRNA_aminoacylation_for_protein_translation,1.099%,-5.908,-0.708,5.149,0.565,0.773,6418,0
GO:0072330,monocarboxylic_acid_biosynthetic_process,0.940%,-6.687,3.543,5.081,0.595,0.776,72330,0
GO:0007346,regulation_of_mitotic_cell_cycle,0.269%,-1.117,3.402,4.537,0.762,0.781,7346,0
GO:0019752,carboxylic_acid_metabolic_process,8.831%,-5.742,4.807,6.054,0.588,0.781,19752,0
GO:0043436,oxoacid_metabolic_process,9.006%,,,6.063,0.588,0.902,19752,1
GO:0034763,negative_regulation_of_transmembrane_transport,0.014%,4.866,2.086,3.251,0.85,0.782,34763,0
GO:0006555,methionine_metabolic_process,0.358%,-6.071,2.679,4.662,0.619,0.784,6555,0
GO:0007165,signal_transduction,6.621%,3.187,-1.27,5.929,0.767,0.788,7165,0
GO:0042777,plasma_membrane_ATP_synthesis_coupled_proton_transport,0.083%,-2.308,2.985,4.027,0.496,0.788,42777,0
GO:0034762,regulation_of_transmembrane_transport,0.202%,4.935,2.24,4.414,0.836,0.788,34762,0
GO:0006364,rRNA_processing,0.952%,-2.334,-5.981,5.087,0.741,0.791,6364,0
GO:0044070,regulation_of_anion_transport,0.095%,5.143,2.397,4.085,0.821,0.792,44070,0
GO:0034765,regulation_of_ion_transmembrane_transport,0.197%,,,4.404,0.81,0.91,44070,1
GO:0046656,folic_acid_biosynthetic_process,0.053%,-6.348,1.135,3.837,0.613,0.797,46656,0
GO:0055080,cation_homeostasis,0.378%,4.221,-1.491,4.685,0.903,0.8,55080,0
GO:0065002,intracellular_protein_transmembrane_transport,0.276%,4.541,3.904,4.549,0.886,0.805,65002,0
GO:0006829,zinc_II_ion_transport,0.032%,4.921,3.826,3.608,0.892,0.806,6829,0
GO:0009767,photosynthetic_electron_transport_chain,0.025%,-1.979,2.951,3.501,0.812,0.808,9767,0
GO:0043271,negative_regulation_of_ion_transport,0.022%,4.773,2.256,3.445,0.831,0.81,43271,0
GO:0010563,negative_regulation_of_phosphorus_metabolic_process,0.182%,1.571,-0.832,4.368,0.771,0.811,10563,0
GO:0000096,sulfur_amino_acid_metabolic_process,0.539%,-5.967,2.554,4.84,0.626,0.818,96,0
GO:0006227,dUDP_biosynthetic_process,0.001%,-5.777,0.203,2.279,0.648,0.82,6227,0
GO:0046077,dUDP_metabolic_process,0.001%,-5.317,0.61,2.279,0.677,0.82,46077,0
GO:0006400,tRNA_modification,0.914%,-2.829,-5.629,5.069,0.776,0.824,6400,0
GO:0006505,GPI_anchor_metabolic_process,0.102%,-3.813,3.374,4.115,0.687,0.825,6505,0
GO:0006207,'de_novo'_pyrimidine_nucleobase_biosynthetic_process,0.192%,-6.345,0.403,4.392,0.606,0.825,6207,0
GO:0019856,pyrimidine_nucleobase_biosynthetic_process,0.241%,,,4.491,0.6,0.959,6207,1
GO:0009089,lysine_biosynthetic_process_via_diaminopimelate,0.288%,-6.741,2.293,4.567,0.593,0.828,9089,0
GO:0009168,purine_ribonucleoside_monophosphate_biosynthetic_process,1.043%,-5.965,0.367,5.127,0.524,0.833,9168,0
GO:0009127,purine_nucleoside_monophosphate_biosynthetic_process,1.044%,,,5.127,0.526,0.909,9168,1
GO:0009156,ribonucleoside_monophosphate_biosynthetic_process,1.394%,,,5.253,0.515,0.939,9168,1
GO:0006865,amino_acid_transport,0.813%,4.905,4.272,5.018,0.774,0.835,6865,0
GO:0044205,'de_novo'_UMP_biosynthetic_process,0.221%,-6.411,-0.042,4.452,0.545,0.835,44205,0
GO:0006415,translational_termination,0.201%,-4.476,-2.672,4.411,0.666,0.841,6415,0
GO:0016114,terpenoid_biosynthetic_process,0.245%,-5.367,3.228,4.498,0.667,0.842,16114,0
GO:0009615,response_to_virus,0.117%,2.306,-1.952,4.175,0.947,0.847,9615,0
GO:0098542,defense_response_to_other_organism,0.220%,,,4.45,0.942,0.9,9615,1
GO:0006235,dTTP_biosynthetic_process,0.052%,-6.087,0.064,3.824,0.578,0.849,6235,0
GO:0046075,dTTP_metabolic_process,0.052%,,,3.826,0.617,0.908,6235,1
GO:0006449,regulation_of_translational_termination,0.036%,-2.573,-2.906,3.667,0.669,0.851,6449,0
GO:0016053,organic_acid_biosynthetic_process,4.171%,-6.406,3.222,5.728,0.554,0.851,16053,0
GO:0000162,tryptophan_biosynthetic_process,0.191%,-6.309,1.111,4.389,0.61,0.853,162,0
GO:0043269,regulation_of_ion_transport,0.244%,4.787,2.358,4.496,0.817,0.853,43269,0
GO:0009236,cobalamin_biosynthetic_process,0.332%,-6.339,0.763,4.63,0.603,0.859,9236,0
GO:0009235,cobalamin_metabolic_process,0.336%,-6.04,1.429,4.634,0.661,0.86,9235,0
GO:0019288,"isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway",0.148%,-6.123,3.509,4.279,0.571,0.862,19288,0
GO:0008610,lipid_biosynthetic_process,2.123%,-5.886,2.212,5.435,0.648,0.865,8610,0
GO:0009233,menaquinone_metabolic_process,0.107%,-5.556,4.334,4.136,0.709,0.872,9233,0
GO:0006782,protoporphyrinogen_IX_biosynthetic_process,0.116%,-6.552,-0.364,4.172,0.641,0.872,6782,0
GO:0006351,"transcription,_DNA-templated",10.659%,-5.079,-4.358,6.136,0.669,0.876,6351,0
GO:0006779,porphyrin-containing_compound_biosynthetic_process,0.424%,-6.061,-3.331,4.736,0.69,0.878,6779,0
GO:0006783,heme_biosynthetic_process,0.244%,,,4.496,0.622,0.935,6779,1
GO:0042168,heme_metabolic_process,0.267%,,,4.535,0.685,0.942,6779,1
GO:0010564,regulation_of_cell_cycle_process,0.312%,-1.296,3.247,4.603,0.759,0.886,10564,0
GO:1901607,alpha-amino_acid_biosynthetic_process,2.557%,-6.566,1.64,5.516,0.53,0.889,1901607,0
GO:0019220,regulation_of_phosphate_metabolic_process,0.579%,1.566,-1.109,4.871,0.763,0.893,19220,0
GO:0006189,'de_novo'_IMP_biosynthetic_process,0.398%,-6.185,0.051,4.708,0.539,0.895,6189,0
GO:0006188,IMP_biosynthetic_process,0.417%,,,4.728,0.538,0.991,6189,1
GO:0009067,aspartate_family_amino_acid_biosynthetic_process,0.715%,-6.724,2.01,4.963,0.573,0.899,9067,0


key,scope,table,field,ordinal,category,comment,filtering,description,title,ordering,json_field_type,vocabulary_scope_ref,visibility,editability,data_type,display_type,display_options,edit_type,default,is_admin,value_template,required,view_groups,data_access_level,alphanumeric_sort
date_created,fields.screen,,,0,,,TRUE,"Date the screen was first recorded in the Screensaver database","Date Recorded",TRUE,,,[d;e],,date,,,,now,TRUE,,,[readEverythingAdmin],,
facility_id,fields.screen,,,1,,"Assigned by the facility",TRUE,"The facility specific ID for this screen","Screen ID",TRUE,,,[l;d;e],,string,link,"{ 'hrefTemplate': '#screen/{facility_id}' }",,,,,,,0,TRUE
screen_type,fields.screen,,,2,,,TRUE,"Screen type","Screen Type",TRUE,,screen.type,[l;d],[c],string,,,select,,,,TRUE,,0,
reconfirmation_screens,fields.screen,custom,,3,,,TRUE,"Reconfirmation screens","Reconfirmation Screens",TRUE,,,,,list,link,"{ 'hrefTemplate': '#screen/{__val__}', 'hideIfEmpty': true }",,,,,,,3,
primary_screen,fields.screen,custom,,4,,,TRUE,"Primary screen","Primary Screen",TRUE,,,,,string,link,"{ 'hrefTemplate': '#screen/{primary_screen}', 'hideIfEmpty': true }",,,,,,,3,
lab_head_id,fields.screen,,,5,Lab,,TRUE,"Lab head ID",Lab,TRUE,,,,[c;u],string,,"{ 'widthClass': 'col-sm-8' }",select,,TRUE,,TRUE,,0,
lab_head_username,fields.screen,custom,,9,Lab,"Alternate natural key that can be used to set this element",TRUE,"Lab head username","Lab Head Username",TRUE,,,[none],[c;u],string,link,"{ 'hrefTemplate': '#screensaveruser/{lab_head_id}' }",,,,,,[readEverythingAdmin],,
lab_name,fields.screen,,,6,Lab,,TRUE,"The name of the lab carrying out the screen","Lab Name",TRUE,,,[d],,string,link,"{ 'hrefTemplate': '#screensaveruser/{lab_head_id}' }",,,,,,,0,
lab_head_name,fields.screen,,,7,Lab,,TRUE,"The name of the user leading the lab","Lab Head",TRUE,,,[l],,string,link,"{ 'hrefTemplate': '#screensaveruser/{lab_head_id}' }",,,,,,,0,
lab_affiliation,fields.screen,,,8,Lab,,TRUE,"The affiliation of the lab carrying out the screen","Lab Affiliation",TRUE,,,[l],,string,,,,,,,,,0,
lead_screener_id,fields.screen,,,9,Lab,,TRUE,"The lead screener ID","Lead Screener ID",TRUE,,,,[c;u],string,link,"{ 'hrefTemplate': '#screensaveruser/{lead_screener_id}' }",select,,TRUE,,TRUE,,0,
lead_screener_username,fields.screen,custom,,9,Lab,"Alternate natural key that can be used to set this element",TRUE,"Lead screener username","Lead Screener Username",TRUE,,,[none],[c;u],string,link,"{ 'hrefTemplate': '#screensaveruser/{lead_screener_id}' }",,,,,,[readEverythingAdmin],,
lead_screener_name,fields.screen,,,10,Lab,,TRUE,"The scientist primarily responsible for running the screen","Lead Screener",TRUE,,,[l;d],,string,link,"{ 'hrefTemplate': '#screensaveruser/{lead_screener_id}' }",,,,,,,0,
title,fields.screen,,,11,,,TRUE,"The title of the screen",Title,TRUE,,,[l;d],[c;u],string,full_string,"{ 'widthClass': 'col-sm-10' }",,,,,TRUE,,0,
status,fields.screen,,,12,Admin,,TRUE,"The current status of the screen",Status,TRUE,,screen.status,[l;d;e],[c;u],string,,,select,,,,,,3,
status_date,fields.screen,,,13,Admin,,TRUE,"The date of the most recent change of status for the screen","Status Date",TRUE,,,[l;d],[c;u],date,,,,,,,,,3,
collaborator_ids,fields.screen,custom,,14,Lab,,TRUE,"Ids of collaborators",Collaborators,TRUE,,,[d],[c;u],list,link,"{ 'hrefTemplate': '#screensaveruser/{__val__}' }",multiselect3,,,,,,0,
collaborator_usernames,fields.screen,custom,,14,Lab,"Alternate natural key that can be used to set this element",TRUE,"Collaborator usernames","Collaborator Usernames",TRUE,,,[none],[c;u],list,link,"{ 'hrefTemplate': '#screensaveruser/{__val__}' }",,,,,,[readEverythingAdmin],,
collaborator_names,fields.screen,custom,,15,Lab,,TRUE,"Name and email of collaborators","Collaborator Names",TRUE,,,,,list,,,,,,,,,0,
date_of_application,fields.screen,,,16,Admin,,TRUE,"The date the application for the screen was submitted","Application Date",TRUE,,,[d],[c;u],date,,,,,TRUE,,,[readEverythingAdmin],,
data_meeting_complete,fields.screen,,,17,Admin,,TRUE,"The initial date the data meeting was completed","Initial Date Data Meeting Completed",TRUE,,,[d],[c;u],date,,,,,TRUE,,,[readEverythingAdmin],,
comments,fields.screen,,,18,Admin,,TRUE,"Administrative comments",Comments,TRUE,,,[d],[c;u],string,,"{ 'rows': 4 }",textarea,,TRUE,,,[readEverythingAdmin],,
summary,fields.screen,,,19,,,TRUE,"A summary of the screen",Summary,TRUE,,,[d],[c;u],string,,"{ 'rows': 4 }",textarea,,,,TRUE,,1,
study_type,fields.screen,,,20,Internal,,TRUE,"The study type (null for screens)","Study Type",TRUE,,study.type,,,string,,,,,TRUE,,,,0,
assay_type,fields.screen,,,21,,,TRUE,"The assay type of the screen","Assay Type",TRUE,,screen.assay_type,[d],[c;u],string,,"{ 'hideIfEmpty': true  }",select,,,,,,1,
species,fields.screen,,,22,Protocol,,TRUE,"The species of the cell organism",Species,TRUE,,screen.species,[d],[c;u],string,,"{ 'hideIfEmpty': true  }",select,,,,,,1,
cell_lines,fields.screen,,,23,Protocol,,TRUE,"The cell lines associated with this screen","Cell Lines",TRUE,,cell_line,[d],[c;u],list,,"{ 'hideIfEmpty': true  }",multiselect3,,,,,,1,
transfection_agent,fields.screen,,,24,Protocol,,TRUE,"The transfection agent","Transfection Agent",TRUE,,transfection_agent,[d],[c;u],string,,"{ 'hideIfEmpty': true  }",select,,,,,,1,
perturbagen_molar_concentration,fields.screen,,,25,Protocol,,TRUE,"Perturbagen (Molar) concentration","Perturbagen (Molar) Concentration",TRUE,,,[d;protocol],[c;u],decimal,siunit,"{ 'decimals': 1, 'multiplier': 1, 'symbol': 'M', 'defaultUnit': 1e-3, 'widthClass': 'col-sm-2', 'maxunit': 1e-3, 'minunit': 1e-6, 'hideIfEmpty': true }",,,,,,,1,
perturbagen_ug_ml_concentration,fields.screen,,,26,Protocol,"This field may be obsolete",TRUE,"Perturbagen concentration (ug/mL)","Perturbagen Concentration (ug/mL)",TRUE,,,[d;protocol],,decimal,,"{ 'decimals': 3, 'multiplier': 1e-6, 'hideIfEmpty': true }",,,,,,,1,
funding_supports,fields.screen,,,27,Admin,,TRUE,"The sources of funding support for the screen","Funding Supports",TRUE,,funding_support,[d],[c;u],list,,,multiselect3,,TRUE,,,[readEverythingAdmin],,
publishable_protocol,fields.screen,,,28,Protocol,,TRUE,"A publication-quality description of the protocol used for this screen",Protocol,TRUE,,,[protocol],[c;u],string,,"{ 'rows': 4 }",textarea,,,,,,1,
publishable_protocol_comments,fields.screen,,,29,Protocol,,TRUE,"Comments associated with the publishable protocol","Protocol Comment",TRUE,,,[protocol],[c;u],string,,,,,TRUE,,,[readEverythingAdmin],,
publishable_protocol_date_entered,fields.screen,,,30,Protocol,,TRUE,"The date the publishable protocol was entered","Protocol Date",TRUE,,,[protocol],[c;u],date,,,,,TRUE,,,[readEverythingAdmin],,
publishable_protocol_entered_by,fields.screen,,,31,Protocol,,TRUE,"The initial of the person that entered the publishable protocol","Protocol Entered By",TRUE,,,[protocol],[c;u],string,,,select,,TRUE,,,[readEverythingAdmin],,
data_sharing_level,fields.screen,,,32,"Data Sharing",,TRUE,"The data sharing level","Data Sharing Level",TRUE,,screen.data_sharing_level,[d],[c;u],integer,,"{ 'group': 'Screen Sharing' }",select,3,,,TRUE,,0,
data_privacy_expiration_date,fields.screen,,,33,"Data Sharing",,TRUE,"The date on which the screen will become visible to level 1 users, set automatically, 26 months after last Screening activity","Data Privacy Expiration Date",TRUE,,,[d;e],[u],date,,"{ 'group': 'Screen Sharing' }",,,TRUE,,,[readEverythingAdmin],,
min_allowed_data_privacy_expiration_date,fields.screen,,,34,"Data Sharing",,TRUE,"If set, this is the earliest date on which the Data Privacy can expire (optional)","Earliest Allowed Data Privacy Expiration Date",TRUE,,,[d],[c;u],date,,"{ 'group': 'Screen Sharing' }",,,TRUE,,,[readEverythingAdmin],,
max_allowed_data_privacy_expiration_date,fields.screen,,,35,"Data Sharing",,TRUE,"If set, this is the latest date on which the Data Privacy can expire (optional)","Latest Allowed Data Privacy Expiration Date",TRUE,,,[d],[c;u],date,,"{ 'group': 'Screen Sharing' }",,,TRUE,,,[readEverythingAdmin],,
data_privacy_expiration_notified_date,fields.screen,,,36,"Data Sharing",,TRUE,"Date at which the data privacy expiration notification was sent","Data Privacy Expiration Notification Sent Date",TRUE,,,[d],[u],date,,"{ 'group': 'Screen Sharing' }",,,TRUE,,,[readEverythingAdmin],,
publications,fields.screen,custom,,37,Protocol,,TRUE,Publications,Publications,TRUE,,,[protocol],,list,,,custom,,,,,,1,
publication_ids,fields.screen,custom,,37,Internal,,TRUE,"Publication IDs","Publication IDs",TRUE,,,,,list,,,,,TRUE,,,,,
attached_files,fields.screen,custom,,38,Admin,,TRUE,"Attached files","Attached Files",TRUE,,,[d],,list,,,custom,,TRUE,,,[readEverythingAdmin],,
pubchem_deposited_date,fields.screen,,,39,Protocol,,TRUE,"The date the screen result was deposited in PubChem BioAssay","PubChem BioAssay Date Deposited",TRUE,,,[protocol],[c;u],date,,"{ 'group': 'PubChem BioAssay' }",,,,,,,1,
pubchem_assay_id,fields.screen,,,40,Protocol,,TRUE,"The PubChem Assay identifier (AID)","PubChem Assay ID",TRUE,,,[protocol],[c;u],string,,"{ 'group': 'PubChem BioAssay', 'orderSeparator': '' }",,,,,,,1,
activity_count,fields.screen,custom,,45,Activity,,TRUE,"Count of activities","Activity Count",TRUE,,,[d],,integer,,,,,TRUE,,,[readEverythingAdmin],3,
date_of_first_screening_activity,fields.screen,,,46,Activity,,TRUE,"The date of the first lab activity performed for this screen","Date of First Screening Activity",TRUE,,,,,date,,,,,TRUE,,,[readEverythingAdmin],3,
date_of_last_activity,fields.screen,,,47,Activity,,TRUE,"The date of the last lab activity performed for this screen","Date of Last Activity",TRUE,,,,,date,,,,,TRUE,,,[readEverythingAdmin],3,
date_of_last_library_screening,fields.screen,,,48,Activity,,TRUE,"The date of the last library screening (excluding external plates)","Date of Last Library Screening",TRUE,,,,,date,,,,,TRUE,,,[readEverythingAdmin],3,
assay_readout_types,fields.screen,,,49,Summary,,TRUE,"The assay readout types used","Assay Readout Types",TRUE,,datacolumn.assay_readout_type,[d],,list,,,multiselect,,TRUE,,,,2,
has_screen_result,fields.screen,,,50,,,TRUE,"Screen result availability","Screen Result",TRUE,,screenresult.availability,[l;d],,string,,,select,,,,,,0,
library_screenings,fields.screen,custom,,151,Summary,,TRUE,"Library screenings recorded","# Library Screenings",TRUE,,,[summary],,integer,link,"{ 'hrefTemplate': '#screen/{facility_id}/activities/search/type__in=libraryscreening,externallibraryscreening' }",,,,,,,3,
libraries_screened_count,fields.screen,,,152,Summary,,TRUE,"The number of libraries that have been screened","Libraries Screened",TRUE,,,[summary],,integer,link,"{ 'hrefTemplate': '#screen/{facility_id}/summary/libraries' }",,,TRUE,,,,2,
unique_library_plates_screened,fields.screen,custom,,153,Summary,,TRUE,"Count of unique library plate numbers screened","Count of Unique Library Plate Numbers Screened",TRUE,,,[summary],,integer,link,"{ 'hrefTemplate': '#screen/{facility_id}/summary/plates' }",,,,,,,2,
library_plate_screening_count,fields.screen,custom,,154,Summary,,TRUE,"The total number of times that library plates have been screened (not including replicates)","Library Plate Screening Count",TRUE,,,[summary],,integer,link,"{ 'hrefTemplate': '#screen/{facility_id}/summary/plates' }",,,TRUE,,,,2,
unique_screened_experimental_well_count,fields.screen,,,155,Summary,,TRUE,"The number of unique experimental library wells that have been screened (count of unique well IDs)","Screening Count for Experimental Wells (unique)",TRUE,,,[summary],,integer,,,,,,,,,2,
screened_experimental_well_count,fields.screen,,,156,Summary,,TRUE,"The number of times that experimental library wells that have been screened (ignoring replicates)","Screening Count for Experimental Wells (Non-unique)",TRUE,,,[summary;d],,integer,,,,,TRUE,,,,2,
min_screened_replicate_count,fields.screen,custom,,157,Summary,,TRUE,"The min number of replicates that have been screened","Min Replicates Screened",TRUE,,,[summary],,integer,,,,,TRUE,,,,2,
max_screened_replicate_count,fields.screen,custom,,158,Summary,,TRUE,"The max number of replicates that have been screened","Max Replicates Screened",TRUE,,,[summary],,integer,,,,,TRUE,,,,2,
library_plates_data_loaded,fields.screen,,,159,Summary,,TRUE,"The number of library plates that have raw data loaded into the system","Library Plates Data Loaded",TRUE,,,[summary],,integer,,,,,TRUE,,,,2,
experimental_well_count,fields.screen,screen_result,,160,Summary,,TRUE,"The number of unique experimental wells for which data have been loaded","Experimental Wells Loaded (unique)",TRUE,,,[summary],,integer,,,,,,,,,2,
last_data_loading_date,fields.screen,screen_result,date_loaded,161,Summary,,TRUE,"The date the current screen results were loaded into the database","Last Data Loading Date",TRUE,,,[summary],,date,link,"{ 'hrefTemplate': '#apilog/order/-date_time/search/ref_resource_name=screen;key={facility_id};diff_keys__contains=last_data_loading_date' }",,,TRUE,,,,2,
total_plated_lab_cherry_picks,fields.screen,,,162,Summary,,TRUE,"The number of lab cherry picks that have been plated to date, for all cherry pick requests","Total Plated Lab Cherry Picks",TRUE,,,[summary],,integer,,,,,TRUE,,,,3,
assay_plates_screened,fields.screen,,,163,Summary,,TRUE,"The number of assay plates that have been screened","Assay Plates Screened",TRUE,,,,,integer,,,,,TRUE,,,,2,
cherry_pick_screenings,fields.screen,custom,,164,Summary,,TRUE,"Number of cherry pick screenings recorded","# Cherry Pick Screenings",TRUE,,,,,integer,link,"{ 'hrefTemplate': '#screen/{facility_id}/activities/search/type__in=cherrypickscreening' }",,,TRUE,,,,3,
positives_summary,fields.screen,custom,,165,Summary,,TRUE,"Summary of positives","Positives Summary",TRUE,,,[summary],,string,,,,,,,,,2,
to_be_requested,fields.screen,,,300,Billing,,TRUE,"Billing information to be requested","Billing Information to be Requested",TRUE,,,[billing],[u],boolean,,,,,TRUE,,,[screenBillingView],,
see_comments,fields.screen,,,301,Billing,,TRUE,"See comments","See Billing Comments",TRUE,,,[billing],[u],boolean,,,,,TRUE,,,[screenBillingView],,
is_billing_for_supplies_only,fields.screen,,,302,Billing,,TRUE,"Billing for supplies only","Billing for Supplies Only",TRUE,,,[billing],[u],boolean,,,,,TRUE,,,[screenBillingView],,
is_fee_form_on_file,fields.screen,,,303,Billing,,TRUE,"Fee form on file","Fee Form on File",TRUE,,,[billing],[u],boolean,,,,,TRUE,,,[screenBillingView],,
amount_to_be_charged_for_screen,fields.screen,,,304,Billing,,TRUE,"Amount to be charged for screen","Amount to be Charged for Screen",TRUE,,,[billing],[u],decimal,,,,,TRUE,,,[screenBillingView],,
facilities_and_administration_charge,fields.screen,,,305,Billing,,TRUE,"Facilities & administration charge","Facilities & Administration Charge",TRUE,,,[billing],[u],decimal,,,,,TRUE,,,[screenBillingView],,
fee_form_requested_date,fields.screen,,,306,Billing,,TRUE,"Fee form requested date","Fee Form Requested Date",TRUE,,,[billing],[u],date,,,,,TRUE,,,[screenBillingView],,
fee_form_requested_initials,fields.screen,,,307,Billing,,TRUE,"Fee form requested initials","Fee Form Requested Initials",TRUE,,,[billing],[u],string,,,,,TRUE,,,[screenBillingView],,
billing_info_return_date,fields.screen,,,308,Billing,,TRUE,"Billing info return date","Billing Info Return Date",TRUE,,,[billing],[u],date,,,,,TRUE,,,[screenBillingView],,
date_completed5kcompounds,fields.screen,,,309,Billing,,TRUE,"Date completed 5k compounds","Date Completed 5k Compounds",TRUE,,,[billing],[u],date,,,,,TRUE,,,[screenBillingView],,
date_faxed_to_billing_department,fields.screen,,,310,Billing,,TRUE,"Date faxed to billing department","Date Faxed to Billing Department",TRUE,,,[billing],[u],date,,,,,TRUE,,,[screenBillingView],,
date_charged,fields.screen,,,311,Billing,,TRUE,"Date charged","Date Charged",TRUE,,,[billing],[u],date,,,,,TRUE,,,[screenBillingView],,
billing_comments,fields.screen,,,312,Billing,,TRUE,Comments,Comments,TRUE,,,[billing],[u],string,,,textarea,,TRUE,,,[screenBillingView],,
screen_id,fields.screen,custom,,999,,,TRUE,"Internal screen ID","Internal Screen ID",TRUE,,,[none],,string,,"{ 'orderSeparator': '' }",,,,,,,0,
screensaver_user_role,fields.screen,custom,,92,Internal,,TRUE,"Role of the provided screener","User Role",TRUE,,screen.user_role,,,string,,,select,,TRUE,,,,,
keywords,fields.screen,custom,,65,Internal,,TRUE,"A set of keywords associated with the screen",Keywords,TRUE,,,,,list,,,textarea,,TRUE,,,,3,
coms_registration_number,fields.screen,,,35,Admin,,TRUE,"COMS number, provided by PI's lab","COMS Registration Number",TRUE,,,,,string,,,,,TRUE,,,[readEverythingAdmin],,
coms_approval_date,fields.screen,,,36,Admin,,TRUE,"The date of approval by COMS or the date on which we determine that our existing approval already covers the proposed experiments","ICCB-L COMS Approval Date",TRUE,,,,,date,,,,,TRUE,,,[readEverythingAdmin],,
overlapping_positive_screens,fields.screen,custom,,401,"Data Sharing",,TRUE,"Screens having at least one positive result for a positive well for this Screen","Overlapping Positives Screens",TRUE,,,[],,list,link,"{ 'hrefTemplate': '#screen/{__val__}' }",,,,,,,2,
user_access_level_granted,fields.screen,custom,,402,"Data Sharing","Dynamically calculated for each Screen the current User is viewing; null if the User is an admin",FALSE,"Access level granted for viewing this screen","User Screen Access Level",FALSE,,field.data_access_level,[api],,integer,,,,,,,,,0,


cv,name,description,dbxref,is_obsolete,is_relationship
NCBI_assembly,anomalouslist,NA,NULL,0,0
NCBI_assembly,asmreleasedate_genbank,Date the GenBankassembly was first released,NULL,0,0
NCBI_assembly,asmreleasedate_refseq,Date the RefSeq assembly was first released,NULL,0,0
NCBI_assembly,asmupdatedate,Date the assembly was last updated,NULL,0,0
NCBI_assembly,assemblyaccession,Space delimited assembly accessions w/ & w/o versions,NULL,0,0
NCBI_assembly,assemblyclass,NA,NULL,0,0
NCBI_assembly,assemblydescription,Assembly description,NULL,0,0
NCBI_assembly,assemblyname,Assembly name,NULL,0,0
NCBI_assembly,assemblystatus,NA,NULL,0,0
NCBI_assembly,assemblytype,Type of the assembly,NULL,0,0
NCBI_assembly,biosampleaccn,BioSample Accession and Id,NULL,0,0
NCBI_assembly,biosampleid,BioSample Accession and Id,NULL,0,0
NCBI_assembly,biosource,NA,NULL,0,0
NCBI_assembly,biosource.infraspecieslist,NA,NULL,0,0
NCBI_assembly,biosource.isolate,Isolate name,NULL,0,0
NCBI_assembly,biosource.sec,sex,NULL,0,0
NCBI_assembly,chainid,NA,NULL,0,0
NCBI_assembly,contign50,Contig length at which 50% of total bases in assembly are in contigs of that length or greater,NULL,0,0
NCBI_assembly,coverage,Sequencing coverage,NULL,0,0
NCBI_assembly,ensemblname,NA,NULL,0,0
NCBI_assembly,exclfromrefseq,Reasons assembly was excluded from RefSeq,NULL,0,0
NCBI_assembly,fromtype,From Type Material,NULL,0,0
NCBI_assembly,ftppath_assembly_rpt,NA,NULL,0,0
NCBI_assembly,ftppath_genbank,NA,NULL,0,0
NCBI_assembly,ftppath_refseq,NA,NULL,0,0
NCBI_assembly,ftppath_regions_rpt,NA,NULL,0,0
NCBI_assembly,ftppath_stats_rpt,NA,NULL,0,0
NCBI_assembly,gb_bioprojects,Uid and accessions of this assembly's projects,NULL,0,0
NCBI_assembly,gb_bioprojects.bioprojectaccn,Uid and accessions of this assembly's projects,NULL,0,0
NCBI_assembly,gb_bioprojects.bioprojectid,Uid and accessions of this assembly's projects,NULL,0,0
NCBI_assembly,gb_projects,NA,NULL,0,0
NCBI_assembly,gbuid,Id of GenBank synonym of this Assembly.,NULL,0,0
NCBI_assembly,lastmajorreleaseaccession,NA,NULL,0,0
NCBI_assembly,lastupdatedate,Date the assembly was last updated,NULL,0,0
NCBI_assembly,latestaccession,NA,NULL,0,0
NCBI_assembly,meta,NA,NULL,0,0
NCBI_assembly,organism,Exploded organism names,NULL,0,0
NCBI_assembly,partialgenomerepresentation,NA,NULL,0,0
NCBI_assembly,primary,NA,NULL,0,0
NCBI_assembly,propertylist,Properties,NULL,0,0
NCBI_assembly,refseq_category,RefSeq Category,NULL,0,0
NCBI_assembly,releaselevel,NA,NULL,0,0
NCBI_assembly,releasetype,Release Type,NULL,0,0
NCBI_assembly,rs_bioprojects,NA,NULL,0,0
NCBI_assembly,rs_projects,NA,NULL,0,0
NCBI_assembly,rsuid,Id of RefSeq Assembly.,NULL,0,0
NCBI_assembly,scaffoldn50,Scaffold length at which 50% of total bases in assembly are in contigs of that length or greater,NULL,0,0
NCBI_assembly,seqreleasedate,Date the most recent sequence went live in ID,NULL,0,0
NCBI_assembly,sortorder,NA,NULL,0,0
NCBI_assembly,speciesname,NA,NULL,0,0
NCBI_assembly,speciestaxid,NA,NULL,0,0
NCBI_assembly,submissiondate,NA,NULL,0,0
NCBI_assembly,submitterorganization,Organization that submitted this assembly,NULL,0,0
NCBI_assembly,synonym,NA,NULL,0,0
NCBI_assembly,synonym.genbank,Id of GenBank synonym of this Assembly.,NULL,0,0
NCBI_assembly,synonym.refseq,NA,NULL,0,0
NCBI_assembly,synonym.similarity,NA,NULL,0,0
NCBI_assembly,taxid,Taxonomy ID,NULL,0,0
NCBI_assembly,ucscname,NA,NULL,0,0
NCBI_assembly,uid,Unique number assigned to publication,NULL,0,0
NCBI_assembly,wgs,WGS Master,NULL,0,0

SRA_ Number,Experiment Accession,Experiment Title,Organism Name,Instrument,Submitter,Study Accession,Study Title,Sample Accession,Sample Title,"Total Size, Mb",Total RUNs,Total Spots,Total Bases,Library Name,Library Strategy,Library Source,Library Selection
SRR3989712,SRX1991250,Whole genome shotgun sequencing of Escherichia coli serovar O145 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594050,,268.76,1,5374063,785407836,Escherichia coli serovar O145 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989713,SRX1991251,Whole genome shotgun sequencing of Escherichia coli serovar O18:H14 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594051,,219.26,1,4369672,638122991,Escherichia coli serovar O18:H14 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989714,SRX1991253,Whole genome shotgun sequencing of Escherichia coli serovar O1:H48 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594053,,202.61,1,3998763,588541619,Escherichia coli serovar O1:H48 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989715,SRX1991254,Whole genome shotgun sequencing of Escherichia coli serovar O1:H1 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594054,,240.11,1,4823901,703730591,Escherichia coli serovar O1:H1 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989716,SRX1991255,Whole genome shotgun sequencing of Escherichia coli serovar O13:H30 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594055,,272.76,1,5456182,804500193,Escherichia coli serovar O13:H30 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989717,SRX1991259,Whole genome shotgun sequencing of Escherichia coli serovar O91:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594059,,271.66,1,5444783,804284383,Escherichia coli serovar O91:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989718,SRX1991260,Whole genome shotgun sequencing of Escherichia coli serovar O68:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594060,,352.94,1,7089834,1043970551,Escherichia coli serovar O68:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989719,SRX1991262,Whole genome shotgun sequencing of Escherichia coli serovar O53:H56 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594061,,279.49,1,5609258,826655358,Escherichia coli serovar O53:H56 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989720,SRX1991264,Whole genome shotgun sequencing of Escherichia coli serovar O149:H18 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594064,,273.6,1,5456181,803490248,Escherichia coli serovar O149:H18 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989721,SRX1991266,Whole genome shotgun sequencing of Escherichia coli serovar O2:H56 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594065,,380.51,1,7735873,1132513100,Escherichia coli serovar O2:H56 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989722,SRX1991268,Whole genome shotgun sequencing of Escherichia coli serovar O8:H19 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594068,,397.18,1,8103879,1179749037,Escherichia coli serovar O8:H19 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989723,SRX1991270,Whole genome shotgun sequencing of Escherichia coli serovar O156:H56 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594070,,169.65,1,3361180,492787848,Escherichia coli serovar O156:H56 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989724,SRX1991271,Whole genome shotgun sequencing of Escherichia coli serovar O2:H56 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594071,,172.57,1,3448526,503059778,Escherichia coli serovar O2:H56 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989725,SRX1991276,Whole genome shotgun sequencing of Escherichia coli serovar O21:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594076,,183.25,1,3608059,531197172,Escherichia coli serovar O21:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989726,SRX1991277,Whole genome shotgun sequencing of Escherichia coli serovar O68:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594077,,217.5,1,4310398,633523569,Escherichia coli serovar O68:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989727,SRX1991278,Whole genome shotgun sequencing of Escherichia coli serovar O103:H56 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594078,,183.33,1,3536284,517238745,Escherichia coli serovar O103:H56 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989728,SRX1991279,Whole genome shotgun sequencing of Escherichia coli serovar O43:H2 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594079,,168.64,1,3242202,474423086,Escherichia coli serovar O43:H2 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989729,SRX1991282,Whole genome shotgun sequencing of Escherichia coli serovar O43:H2 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594081,,192.98,1,3750824,546880596,Escherichia coli serovar O43:H2 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989730,SRX1991283,Whole genome shotgun sequencing of Escherichia coli serovar O2:H57 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594082,,167.87,1,3253720,473836195,Escherichia coli serovar O2:H57 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989731,SRX1991284,Whole genome shotgun sequencing of Escherichia coli serovar O53:H57 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594084,,214.89,1,4141131,607261015,Escherichia coli serovar O53:H57 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989732,SRX1991285,Whole genome shotgun sequencing of Escherichia coli serovar O73:H34 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594085,,222,1,4328076,629730962,Escherichia coli serovar O73:H34 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989733,SRX1991286,Whole genome shotgun sequencing of Escherichia coli serovar O17 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594086,,388.66,1,7100724,1032042939,Escherichia coli serovar O17 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989734,SRX1991297,Whole genome shotgun sequencing of Escherichia coli serovar O158 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594095,,290.31,1,5310719,773584725,Escherichia coli serovar O158 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989735,SRX1991298,Whole genome shotgun sequencing of Escherichia coli serovar O105 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594096,,248.56,1,4535346,659429532,Escherichia coli serovar O105 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989736,SRX1991300,Whole genome shotgun sequencing of Escherichia coli serovar O141 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594100,,468.83,1,8586293,1245618107,Escherichia coli serovar O141 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989737,SRX1991301,Whole genome shotgun sequencing of Escherichia coli serovar O49 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594101,,378.21,1,6919597,1008264377,Escherichia coli serovar O49 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989738,SRX1991303,Whole genome shotgun sequencing of Escherichia coli serovar O59 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594103,,397.8,1,7296255,1057393288,Escherichia coli serovar O59 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989739,SRX1991305,Whole genome shotgun sequencing of Escherichia coli serovar O3 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594104,,509.74,1,9399594,1362778401,Escherichia coli serovar O3 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989740,SRX1991306,Whole genome shotgun sequencing of Escherichia coli serovar O29 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594105,,763.87,1,14246697,2053664208,Escherichia coli serovar O29 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989741,SRX1991313,Whole genome shotgun sequencing of Escherichia coli serovar O36 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594113,,508.84,1,9379922,1361596880,Escherichia coli serovar O36 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989742,SRX1991314,Whole genome shotgun sequencing of Escherichia coli serovar O79 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594114,,555.5,1,10254120,1485433243,Escherichia coli serovar O79 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989743,SRX1991315,Whole genome shotgun sequencing of Escherichia coli serovar O81 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594115,,513.53,1,9539741,1382972506,Escherichia coli serovar O81 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989744,SRX1991316,Whole genome shotgun sequencing of Escherichia coli serovar O75 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594116,,416.44,1,7693681,1119256054,Escherichia coli serovar O75 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989745,SRX1991317,Whole genome shotgun sequencing of Escherichia coli serovar O111 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594117,,346.69,1,6319116,921896004,Escherichia coli serovar O111 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989746,SRX1991318,Whole genome shotgun sequencing of Escherichia coli serovar O7 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594118,,515.13,1,9527487,1381505744,Escherichia coli serovar O7 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989747,SRX1991319,Whole genome shotgun sequencing of Escherichia coli serovar O135 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594119,,350.24,1,6444037,937317293,Escherichia coli serovar O135 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989748,SRX1991320,Whole genome shotgun sequencing of Escherichia coli serovar O124 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594120,,358.79,1,6655299,967387997,Escherichia coli serovar O124 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989749,SRX1991321,Whole genome shotgun sequencing of Escherichia coli serovar O153:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594121,,527.11,1,9824231,1423361307,Escherichia coli serovar O153:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989750,SRX1991322,Whole genome shotgun sequencing of Escherichia coli serovar OX23:H38 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594122,,671.38,1,12448576,1805152432,Escherichia coli serovar OX23:H38 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989751,SRX1991323,Whole genome shotgun sequencing of Escherichia coli serovar O46:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594123,,461.07,1,8481089,1235439481,Escherichia coli serovar O46:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989752,SRX1991324,Whole genome shotgun sequencing of Escherichia coli serovar O7:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594124,,535.47,1,9900500,1436964693,Escherichia coli serovar O7:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989753,SRX1991325,Whole genome shotgun sequencing of Escherichia coli serovar O149:H9 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594125,,232.07,1,3855603,561564441,Escherichia coli serovar O149:H9 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989754,SRX1991326,Whole genome shotgun sequencing of Escherichia coli serovar OX08 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594126,,765.58,1,14338676,2071237399,Escherichia coli serovar OX08 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989755,SRX1991328,Whole genome shotgun sequencing of Escherichia coli serovar O5:H32 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594128,,413.31,1,7603968,1108530662,Escherichia coli serovar O5:H32 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989756,SRX1991329,Whole genome shotgun sequencing of Escherichia coli serovar O4 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594129,,557.47,1,10376946,1504630505,Escherichia coli serovar O4 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989757,SRX1991330,Whole genome shotgun sequencing of Escherichia coli serovar O4:H42 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594130,,319.08,1,5834113,852799543,Escherichia coli serovar O4:H42 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989758,SRX1991331,Whole genome shotgun sequencing of Escherichia coli serovar O116 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594131,,440.32,1,8053843,1174228397,Escherichia coli serovar O116 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989759,SRX1991333,Whole genome shotgun sequencing of Escherichia coli serovar O78:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594133,,429.81,1,7894929,1151744302,Escherichia coli serovar O78:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989760,SRX1991335,Whole genome shotgun sequencing of Escherichia coli serovar O88:H52 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594135,,302.87,1,5517522,804757459,Escherichia coli serovar O88:H52 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989761,SRX1991336,Whole genome shotgun sequencing of Escherichia coli serovar O144:H42 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594136,,424.4,1,7795331,1138900240,Escherichia coli serovar O144:H42 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989762,SRX1991337,Whole genome shotgun sequencing of Escherichia coli serovar O85:H1 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594137,,386.68,1,7078141,1032609220,Escherichia coli serovar O85:H1 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989763,SRX1991338,Whole genome shotgun sequencing of Escherichia coli serovar O20:H27 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594138,,365.87,1,6740738,980385602,Escherichia coli serovar O20:H27 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989764,SRX1991339,Whole genome shotgun sequencing of Escherichia coli serovar O172:H23 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594139,,316.48,1,5768980,843603459,Escherichia coli serovar O172:H23 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989765,SRX1991340,Whole genome shotgun sequencing of Escherichia coli serovar O162 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594140,,327.18,1,6010083,874104524,Escherichia coli serovar O162 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989766,SRX1991341,Whole genome shotgun sequencing of Escherichia coli serovar O33:H30 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594141,,521.15,1,9630788,1400454385,Escherichia coli serovar O33:H30 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989767,SRX1991342,Whole genome shotgun sequencing of Escherichia coli serovar O132:H42 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594142,,342.74,1,6303273,918256474,Escherichia coli serovar O132:H42 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989768,SRX1991343,Whole genome shotgun sequencing of Escherichia coli serovar OX28:H11 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594143,,359.92,1,6601784,962706076,Escherichia coli serovar OX28:H11 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989769,SRX1991344,Whole genome shotgun sequencing of Escherichia coli serovar O22:H21 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594144,,903.21,1,16104601,2376029016,Escherichia coli serovar O22:H21 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989770,SRX1991345,Whole genome shotgun sequencing of Escherichia coli serovar O163:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594145,,603.65,1,10805360,1594542971,Escherichia coli serovar O163:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989771,SRX1991346,Whole genome shotgun sequencing of Escherichia coli serovar O87:H25 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594146,,607,1,10661958,1576569704,Escherichia coli serovar O87:H25 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989772,SRX1991348,Whole genome shotgun sequencing of Escherichia coli serovar O19:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594147,,601.33,1,10563325,1563623969,Escherichia coli serovar O19:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989773,SRX1991351,Whole genome shotgun sequencing of Escherichia coli serovar O174:H16 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594151,,447.2,1,7766435,1150451471,Escherichia coli serovar O174:H16 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989774,SRX1991352,Whole genome shotgun sequencing of Escherichia coli serovar O118:H27 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594152,,695.53,1,12203170,1805313134,Escherichia coli serovar O118:H27 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989776,SRX1991355,Whole genome shotgun sequencing of Escherichia coli serovar O60:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594154,,577.06,1,10072784,1489908266,Escherichia coli serovar O60:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989777,SRX1991356,Whole genome shotgun sequencing of Escherichia coli serovar OX28:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594156,,754.96,1,13280304,1965349275,Escherichia coli serovar OX28:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989778,SRX1991357,Whole genome shotgun sequencing of Escherichia coli serovar O6:H39 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594157,,622.95,1,11063774,1635031215,Escherichia coli serovar O6:H39 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989779,SRX1991361,Whole genome shotgun sequencing of Escherichia coli serovar O69:H38 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594161,,413.21,1,7178675,1061656127,Escherichia coli serovar O69:H38 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989780,SRX1991363,Whole genome shotgun sequencing of Escherichia coli serovar O29 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594163,,395.93,1,6978481,1032383321,Escherichia coli serovar O29 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989781,SRX1991365,Whole genome shotgun sequencing of Escherichia coli serovar O20:H3 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594165,,282.17,1,4874557,721704737,Escherichia coli serovar O20:H3 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989782,SRX1991366,Whole genome shotgun sequencing of Escherichia coli serovar O85:H16 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594164,,453.96,1,7890948,1167363498,Escherichia coli serovar O85:H16 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989783,SRX1991367,Whole genome shotgun sequencing of Escherichia coli serovar O16:H27 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594167,,459.4,1,7966140,1179885922,Escherichia coli serovar O16:H27 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989784,SRX1991368,Whole genome shotgun sequencing of Escherichia coli serovar OX23 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594168,,475.26,1,8301821,1227584910,Escherichia coli serovar OX23 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989785,SRX1991369,Whole genome shotgun sequencing of Escherichia coli serovar OX23 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594169,,506.53,1,8743077,1291019033,Escherichia coli serovar OX23 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989786,SRX1991371,Whole genome shotgun sequencing of Escherichia coli serovar O43 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594171,,459.11,1,7994883,1183432838,Escherichia coli serovar O43 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989787,SRX1991372,Whole genome shotgun sequencing of Escherichia coli serovar O13:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594172,,754.6,1,13156987,1949202853,Escherichia coli serovar O13:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989788,SRX1991373,Whole genome shotgun sequencing of Escherichia coli serovar O116:H35 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594173,,493.11,1,8526715,1262884954,Escherichia coli serovar O116:H35 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989789,SRX1991375,Whole genome shotgun sequencing of Escherichia coli serovar O136:H15 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594175,,595.48,1,10330595,1529072903,Escherichia coli serovar O136:H15 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989790,SRX1991376,Whole genome shotgun sequencing of Escherichia coli serovar OX23 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594176,,817.57,1,14819487,2161433337,Escherichia coli serovar OX23 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989791,SRX1991377,Whole genome shotgun sequencing of Escherichia coli serovar O116:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594177,,1076.8,1,19621239,2876200022,Escherichia coli serovar O116:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989792,SRX1991378,Whole genome shotgun sequencing of Escherichia coli serovar O101:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594178,,983.59,1,17890910,2615359850,Escherichia coli serovar O101:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989793,SRX1991380,Whole genome shotgun sequencing of Escherichia coli serovar O96:H9 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594180,,888.32,1,15926409,2352484388,Escherichia coli serovar O96:H9 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989794,SRX1991381,Whole genome shotgun sequencing of Escherichia coli serovar O96:H9 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594181,,641.31,1,11349482,1678874580,Escherichia coli serovar O96:H9 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989795,SRX1991382,Whole genome shotgun sequencing of Escherichia coli serovar O135 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594182,,763.67,1,13460641,1986228018,Escherichia coli serovar O135 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989796,SRX1991427,Whole genome shotgun sequencing of Escherichia coli serovar O96:H9 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594206,,644.83,1,11368005,1679725386,Escherichia coli serovar O96:H9 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989797,SRX1991429,Whole genome shotgun sequencing of Escherichia coli serovar O51:H10 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594208,,797.06,1,14420326,2127942629,Escherichia coli serovar O51:H10 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989798,SRX1991430,Whole genome shotgun sequencing of Escherichia coli serovar O124:H38 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594209,,618.3,1,10915030,1615739029,Escherichia coli serovar O124:H38 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989799,SRX1991431,Whole genome shotgun sequencing of Escherichia coli serovar O55:H15 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594210,,605.38,1,10574016,1564900780,Escherichia coli serovar O55:H15 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989800,SRX1991432,Whole genome shotgun sequencing of Escherichia coli serovar O73:H43 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594211,,634.32,1,11279057,1668926907,Escherichia coli serovar O73:H43 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989801,SRX1991433,Whole genome shotgun sequencing of Escherichia coli serovar O158:H7 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594212,,408.24,1,6873110,1016337073,Escherichia coli serovar O158:H7 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989802,SRX1991434,Whole genome shotgun sequencing of Escherichia coli serovar O43:H8 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594213,,341.72,1,5779606,850822481,Escherichia coli serovar O43:H8 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989803,SRX1991435,Whole genome shotgun sequencing of Escherichia coli serovar O88:H43 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594214,,514.61,1,8815528,1303848644,Escherichia coli serovar O88:H43 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989804,SRX1991445,Whole genome shotgun sequencing of Escherichia coli serovar O163 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594224,,386.92,1,6535627,961764056,Escherichia coli serovar O163 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989805,SRX1991447,Whole genome shotgun sequencing of Escherichia coli serovar O128:H35 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594225,,300.71,1,5107719,748066884,Escherichia coli serovar O128:H35 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989806,SRX1991448,Whole genome shotgun sequencing of Escherichia coli serovar O162 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594226,,402.57,1,6806726,1002660172,Escherichia coli serovar O162 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989807,SRX1991451,Whole genome shotgun sequencing of Escherichia coli serovar O20:H11 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594230,,354.74,1,6028097,885113318,Escherichia coli serovar O20:H11 Nextera XT shotgun,WGS,GENOMIC,RANDOM
SRR3989808,SRX1991453,Whole genome shotgun sequencing of Escherichia coli serovar O57 by Illumina NextSeq 500,Escherichia coli,NextSeq 500,CFSAN,SRP058582,GenomeTrakr Project: US Food and Drug Administration,SRS1594231,,484.79,1,8075342,1191312271,Escherichia coli serovar O57 Nextera XT shotgun,WGS,GENOMIC,RANDOM


origin,gold,ours,precision,recall,f-score,type
Its my birthday tomorrow .,It 's my birthday tomorrow .,My birthday is tomorrow .,0.0,0.0,0.0,
The goal of occupational safety and health program are to foster safe and healthy work environment .,The goal of an occupational safety and health program is to foster a safe and healthy work environment .,The goal of occupational safety and health programs is to foster a safe and healthy work environment .,0.6666666666666666,0.6666666666666666,0.6666666666666666,
The research and regulation to occupation safety and health is a relative recent phenomenon .,The research and regulation of occupational safety and health are a relatively recent phenomenon .,The research and regulation of occupation safety and health is a relatively recent phenomenon .,1.0,0.5,0.8333333333333334,
Have you stop beating you wife ?,Have you stopped beating your wife ?,Have you stopped beating your wife ?,1.0,1.0,1.0,
Does the state have the right to censor pronography or restrict tobacco advertising ?,Does the state have the right to censor pornography or restrict tobacco advertising ?,Does the state have the right to censor pornography or restrict tobacco advertising ?,1.0,1.0,1.0,
The commission sparked public outrage resulted on the Mines Act in 1842 .,The commission sparked public outrage which resulted in the Mines Act of 1842 .,The commission sparked public outrage that resulted in the Mines Act in 1842 .,0.5,0.3333333333333333,0.45454545454545453,
"This fallow period is shortened if population density grows , require the input of nutrient and some manual pest control .","This fallow period is shortened if population density grows , requiring the input of nutrients and some manual pest control .","This fallow period is shortened if population density grows , requiring the input of nutrient and some manual pest control .",1.0,0.5,0.8333333333333334,
"Non-meat animals , such as millk cows and egg-producing chickens , also shown significance production increases .","Non-meat animals , such as milk cows and egg-producing chickens , also showed significant production increases .","Non-meat animals , such as mills cows and egg-producing chickens , have also shown significant production increases .",0.3333333333333333,0.3333333333333333,0.3333333333333333,
"These system is particularly important in areas where crop production is not feasible because climate or soil , representing 30–40 million pastoralists .","This system is particularly important in areas where crop production is not feasible because of climate or soil , representing 30–40 million pastoralists .","These systems are particularly important in areas where crop production is not feasible because of climate or soil , representing 30–40 million pastoralists .",0.5,0.5,0.5,
"Althoughy there have been periodic initiatives to revive they use , but airships see only niche application since that time .","Although there have been periodic initiatives to revive their use , airships have seen only niche application since that time .","Although there have been periodic initiatives to revive their use , airships have seen only niche applications since that time .",0.8,1.0,0.8333333333333334,
Jean-Pierre Blanchard fly the first human-powered dirigible in 1784 and crossed the English Channel at one in 1785 .,Jean-Pierre Blanchard flew the first human-powered dirigible in 1784 and crossed the English Channel in one in 1785 .,Jean-Pierre Blanchard fly the first human-powered dirigible in 1784 and crossed the English Channel in one in 1785 .,1.0,0.5,0.8333333333333334,
"By the begin of WOWII , many towns and cities had built airports , and there is numerous qualifying pilots available .","By the beginning of World War II , many towns and cities had built airports , and there were numerous qualified pilots available .","By the beginning of WOWII , many towns and cities had built airports , and there were numerous qualifying pilots available .",1.0,0.5,0.8333333333333334,
"From the 1960s composite material airframes and quieter , more efficient engines have became available , and Concorde provided supersonic passanger service for more than two decades , but the most important lasting innovations have taken place to instrumentation and control .","Since the 1960s composite material airframes and quieter , more efficient engines have become available , and Concorde provided supersonic passenger service for more than two decades , but the most important lasting innovations have taken place in instrumentation and control .","From the 1960s composite material airframes and quieter , more efficient engines have became available , and Concorde provided supersonicanger service for more than two decades , but the most important lasting innovations have taken place in instrumentation and control .",0.5,0.25,0.4166666666666667,
"Aviation safety mean the state of a aviation system or organization in which risks associated by aviation activities , related to , or in direct support of the operation of aircraft , are reduced and controlled to an acceptable level .","Aviation safety means the state of an aviation system or organization in which risks associated with aviation activities , related to , or in direct support of the operation of aircraft , are reduced and controlled to an acceptable level .","Aviation safety is the state of an aviation system or organization in which risks associated with aviation activities , related to , or in direct support of the operation of aircraft , are reduced and controlled to an acceptable level .",0.6666666666666666,0.6666666666666666,0.6666666666666666,
"In additional , there are environmental impacts specify to aviation .","In addition , there are environmental impacts specific to aviation .","In addition , there are environmental impacts specify to aviation .",1.0,0.5,0.8333333333333334,
"Even white light might be create using individual red , green and blue LEDs , it results in poor color rendering , since only three narrow bands of wavelengths of light are being emitted","Even though white light can be created using individual red , green and blue LEDs , this results in poor color rendering , since only three narrow bands of wavelengths of light are being emitted","Even white light might be created using individual red , green and blue LEDs , it results in poor color rendering , since only three narrow bands of wavelengths of light are being emitted .",0.5,0.25,0.4166666666666667,
The reason be that marriages make particularly men become more future-oriented and take the economic and other responsibility of family .,The reason may be that marriages make particularly men become more future-oriented and take an economic and other responsibility of the family .,The reason is that marriages make particularly men become more future-oriented and take the economic and other responsibility of family .,0.0,0.0,0.0,
"He call them oxidizing rays to emphasize chemical reactivity and distinguishing them from heat rays , discovered the previous year at the other end of the visible spectrum .","He called them oxidizing rays to emphasize chemical reactivity and to distinguish them from heat rays , discovered the previous year at the other end of the visible spectrum .","He calls them oxidizing rays to emphasize chemical reactivity and distinguish them from heat rays , discovered the previous year at the other end of the visible spectrum .",0.0,0.0,0.0,
By 1903 it is known most effective wavelengths were around 250 nm .,By 1903 it was known the most effective wavelengths were around 250 nm .,By 1903 it was known the most effective wavelengths were around 250 nm .,1.0,1.0,1.0,
"Both UVA and UVB destroy vitamin A in skin , can cause further damaging .","Both UVA and UVB destroy vitamin A in skin , which may cause further damage .","Both UVA and UVB destroy vitamin A in the skin , which can cause further damage .",0.6666666666666666,0.6666666666666666,0.6666666666666666,
The amount of UV light produced by Sun means that the Earth would not be able to sustain life on dry land if most of that light not filtered out by the almosphere .,The amount of UV light produced by the Sun means that the Earth would not be able to sustain life on dry land if most of that light were not filtered out by the atmosphere .,The amount of UV light produced by the Sun means that the Earth would not be able to sustain life on dry land if most of that light was not filtered out by the atmosphere .,0.6666666666666666,0.6666666666666666,0.6666666666666666,
"In the electronic level , absorption in the ultraviolet and visible portions of the spectrum depends on the electron orbital are spaced such that they can absorb a quantum of light of a specific frequency , and does not violate selection rules .","At the electronic level , absorption in the ultraviolet and visible portions of the spectrum depends on if the electron orbitals are spaced such that they can absorb a quantum of light of a specific frequency , and does not violate selection rules .","At the electronic level , absorption in the ultraviolet and visible portions of the spectrum depends on the electron orbital are spaced such that they can absorb a quantum of light of a specific frequency , and does not violate selection rules .",1.0,0.3333333333333333,0.7142857142857143,
Computer modeling of light transmission throught translucent ceramic alumina has shown that microscopic pore trapped near grain boundaries act as primary scattering centers .,Computer modeling of light transmission through translucent ceramic alumina has shown that microscopic pores trapped near grain boundaries act as primary scattering centers .,Computer modeling of light transmission through translucent ceramic alumina has shown that microscopic pores trapped near grain boundaries act as primary scattering centers .,1.0,1.0,1.0,
The states in different material vary in the range from energy that they can absorb .,The states in different materials vary in the range of energy that they can absorb .,The states of different materials vary in the range of energy that they can absorb .,0.6666666666666666,1.0,0.7142857142857142,
The attenuation of light of all frequency and wavelengths is due combined mechanisms of absorption and scattering .,The attenuation of light of all frequencies and wavelengths is due to the combined mechanisms of absorption and scattering .,The attenuation of light of all frequency and wavelengths is due to combined mechanisms of absorption and scattering .,1.0,0.3333333333333333,0.7142857142857143,
In the fruit fly insulin both regulate blood sugar as well acting as an growth factor .,In the fruit fly insulin both regulates blood sugar as well as acting as a growth factor .,"In the fruit fly , insulin both regulates blood sugar as well as acting as a growth factor .",0.75,1.0,0.7894736842105263,
"The second phase to synthesizing tryptophan itself from the 5-hydroxytryptophan intermediate would require adding ethanol and water , and letting sit for 30 days this time .","The second phase to synthesizing tryptophan itself from the 5-hydroxytryptophan intermediate would require adding ethanol and water , and letting sit for 30 days this time .","The second phase to synthesizing tryptophan itself from the 5-hydroxytryptophan intermediate would require adding ethanol and water , and letting sit for 30 days this time .",1.0,1.0,1.0,
"The brain uses significantly less energy during sleep than this does when awoke , especially during non-REM sleep .","The brain uses significantly less energy during sleep than it does when awake , especially during non-REM sleep .","The brain uses significantly less energy during sleep than it does when awoke , especially during non-REM sleep .",1.0,0.5,0.8333333333333334,
Conversely he or she can have difficulty waking up in the trough of the cycle .,Conversely they can have difficulty waking up in the trough of the cycle .,Conversely he or she can have difficulty waking up in the trough of the cycle .,1.0,0.0,0.0,
"The human physically organism restores itself during sleep , healing itself and removing metabolic wastes which build during periods of activity","The human organism physically restores itself during sleep , healing itself and removing metabolic wastes which build up during periods of activity","The human physical organism restores itself during sleep , healing itself and removing metabolic wastes which build up during periods of activity",0.5,0.5,0.5,
Many of Shakespeare play were published in editions of varying quality and accuracy in his lifetime .,Many of Shakespeare 's plays were published in editions of varying quality and accuracy in his lifetime .,Many of Shakespeare 's plays were published in editions of varying quality and accuracy in his lifetime .,1.0,1.0,1.0,
"Throughout 20th and 21st century , Shakespeare 's works have been continually adapted and rediscovered with new movements in scholarship and performance .","Throughout the 20th and 21st centuries , Shakespeare 's works have been continually adapted and rediscovered by new movements in scholarship and performance .","Throughout the 20th and 21st century , Shakespeare 's works have been continually adapted and rediscovered with new movements in scholarship and performance .",1.0,0.3333333333333333,0.7142857142857143,
It is not so really clear for which companies Shakespeare wrote this early plays .,It is not clear for which companies Shakespeare wrote his early plays .,It is not really clear for which company Shakespeare wrote these early plays .,0.0,0.0,0.0,
"The Romantic poets attempted revive Shakespearean verse drama , though with a little success .","The Romantic poets attempted to revive Shakespearean verse drama , though with little success .","The Romantic poets attempted to revive Shakespearean verse drama , though with little success .",1.0,1.0,1.0,
"Some commentators have seen this change on mood as evidence of an more serene view of life on Shakespeare 's part , but it may merely reflect the theatrical fashion on the day .","Some commentators have seen this change in mood as evidence of a more serene view of life on Shakespeare 's part , but it may merely reflect the theatrical fashion of the day .","Some commentators have seen this change in mood as evidence of a more serene view of life on Shakespeare 's part , but it may merely reflect the theatrical fashion of the day .",1.0,1.0,1.0,
"In 1593 and 1594 , when the threatres were closed because by plague , Shakespeare published two narrative poems on sexual themes , Venus and Adonis and The Rape of Lucrece .","In 1593 and 1594 , when the theatres were closed because of plague , Shakespeare published two narrative poems on sexual themes , Venus and Adonis and The Rape of Lucrece .","In 1593 and 1594 , when the theatres were closed because of the plague , Shakespeare published two narrative poems on sexual themes , Venus and Adonis and The rape of Lucrece .",0.5,1.0,0.5555555555555556,
This decision are based on the factors analyzed in a planning stage as well as where the product is in the product live cycle .,This decision is based on the factors analyzed in the planning stage as well as where the product is in the product life cycle .,This decision is based on the factors analyzed in the planning stage as well as where the product is in the product life cycle .,1.0,1.0,1.0,
"To stimulate the growth of sale , use for advertising may be high , in other to heightening awareness of the product in question .","To stimulate the growth of sales , use of advertising may be high , in order to heighten awareness of the product in question .","To stimulate the growth of sales , the use of advertising may be high , in other to heightening awareness of the product in question .",0.6666666666666666,0.5,0.625,
"Viral marketing can be greatly facilitated by social medium and if successful , allows key marketing messages and content in reaching large number of target audience within a short time frame .","Viral marketing can be greatly facilitated by social media and if successful , allows key marketing messages and content in reaching a large number of target audiences within a short time frame .","Viral marketing can be greatly facilitated by social medium and if successful , allows key marketing messages and content to reach large number of target audiences within a short time frame .",0.5,0.3333333333333333,0.45454545454545453,
C2C marketing represents a market envirnment where one customer purchase goods from another customer using a third-party business or platform to facilitate the transaction .,C2C marketing represents a market environment where one customer purchases goods from another customer using a third-party business or platform to facilitate the transaction .,C2C marketing represents a market environment where one customer purchases goods from another customer using a third-party business or platform to facilitate the transaction .,1.0,1.0,1.0,
He concluded there are fourteen different types of cubics that cannot be reduced to a equation of a lesser degree .,He concluded that there are fourteen different types of cubics that cannot be reduced to an equation of a lesser degree .,He concluded there are fourteen different types of cubics that cannot be reduced to an equation of a lesser degree .,1.0,0.5,0.8333333333333334,
"I did not observe that he had any great belief of astrological predictions , nor I have seen or heard from any of the great scientists who had such belief .","I did not observe that he had any great belief in astrological predictions , nor have I seen or heard of any of the great scientists who had such belief .","I did not observe that he had any great belief in astrological predictions , nor have I seen or heard from any of the great scientists who had such beliefs .",0.6666666666666666,0.6666666666666666,0.6666666666666666,
The premise of PMI is that the tools and technique of project management are common even among the widespead application of projects from the software industry to the construction industry .,The premise of PMI is that the tools and techniques of project management are common even among the widespread application of projects from the software industry to the construction industry .,The premise of PMI is that the tools and techniques of project management are common even among the widespread application of projects from the software industry to the construction industry .,1.0,1.0,1.0,
Ballet is a collaboration art form .,Ballet is a collaborative art form .,Ballet is a collaboration art form .,1.0,0.0,0.0,
The musical assistant explain developments of musical research and translates artistic ideas into programming languages .,The musical assistant explains developments in musical research and translates artistic ideas into programming languages .,The musical assistant explains developments of musical research and translates artistic ideas into programming languages .,1.0,0.5,0.8333333333333334,
"Examples of products created by mean of commons-based peer production include Linux , an computer operating system","Examples of products created by means of commons-based peer production include Linux , a computer operating system","Examples of products created by means of Commons-based peer production include Linux , a computer operating system",0.6666666666666666,1.0,0.7142857142857142,
"Wikipedia is a example of a collaborative editing project on a large scale , which can be both good and bad , because of the large contributions by the public , Wikipedia has one of the widest ranges of material in the world .","Wikipedia is an example of a collaborative editing project on a large scale , which can be both good and bad . Because of the large contributions by the public , Wikipedia has one of the widest ranges of material in the world .","Wikipedia is an example of a collaborative editing project on a large scale , which can be both good and bad . because of the large contributions by the public , Wikipedia has one of the widest ranges of material in the world .",0.5,0.5,0.5,
"The typing might be organized by divides the writing into sub-tasks assigned to each group member , with the first part of the tasks done before the next parts , or he or she might work together on each tasks .","The typing might be organized by dividing the writing into sub-tasks assigned to each group member , with the first part of the tasks done before the next parts , or they might work together on each task .","The typing might be organized by divides the writing into sub-tasks assigned to each group member , with the first part of the task done before the next parts , or he or they might work together on each task .",0.3333333333333333,0.3333333333333333,0.3333333333333333,
"Such asynchronous contributions are very efficient in the current time , as group members need not to assemble order to work together .","Such asynchronous contributions are very efficient in time , as group members need not assemble in order to work together .","Such asynchronous contributions are very efficient at the current time , as group members need not need to assemble in order to work together .",0.3333333333333333,0.3333333333333333,0.3333333333333333,
That is increasing amount of research literature investigating how a collaborative writing can improve learning experiences .,There is increasing amount of research literature investigating how collaborative writing can improve learning experiences .,There is an increasing amount of research literature investigating how collaborative writing can improve learning experiences .,0.6666666666666666,1.0,0.7142857142857142,
"At first , the designers of word processing systems combines existing technologies with emerging ones to develop stand-alone equipment , created a new business distinct to the emerging world of the personally computer .","At first , the designers of word processing systems combined existing technologies with emerging ones to develop stand-alone equipment , creating a new business distinct from the emerging world of the personal computer .","At first , the designers of word processing systems combine existing technologies with emerging ones to develop stand-alone equipment , creating a new business distinct to the emerging world of the personally computer .",0.5,0.25,0.4166666666666667,
Word processors do not develop out computer technolology .,Word processors did not develop out of computer technology .,Word processors do not develop out of computer technology .,1.0,0.6666666666666666,0.9090909090909091,
"Word processing systems would create a lot much more complex and capable text were developed and prices began to fall , making them more accessible to the public .","Word processing systems that would create much more complex and capable text were developed and prices began to fall , making them more accessible to the public .","Word processing systems that would create a lot much more complex and capable text were developed and prices began to fall , making them more accessible to the public .",1.0,0.5,0.8333333333333334,
"A demand for new and interesting fonts , which can be found the free of copyright restrictions , or commissioned from font designers , occurred .","A demand for new and interesting fonts , which can be found free of copyright restrictions , or commissioned from font designers , occurred .","A demand for new and interesting fonts , which can be found free of copyright restrictions , or commissioned from font designers , occurred .",1.0,1.0,1.0,
"Five of these amphora were designated as originating from the king personal estate , with the sixth from the estate of the royal house of Aten .","Five of these amphoras were designated as originating from the king 's personal estate , with the sixth from the estate of the royal house of Aten .","Five of these amphora were designated as originating from the king 's personal estate , with the sixth from the estate of the royal house of Aten .",1.0,0.5,0.8333333333333334,
Both of it regions eventually evolved into American wine 's oldest and largest wine producrs respectively .,Both of these regions eventually evolved into American wine 's oldest and largest wine producers respectively .,Both of these regions eventually evolved into American wine 's oldest and largest wine products respectively .,0.5,0.5,0.5,
"Wine must also be made from other species of grape or from hybrids , created by the genetical crossing of two species .","Wine can also be made from other species of grape or from hybrids , created by the genetic crossing of two species .","Wine must also be made from other species of grape or from hybrids , created by the genetical crossing of two species .",1.0,0.0,0.0,
Some blended wine names are marketing terms whose use is governed by trademark law rather than by specific wine laws .,Some blended wine names are marketing terms whose use is governed by trademark law rather than by specific wine laws .,Some blended wine names are marketing terms whose use is governed by trademark law rather than by specific wine laws .,1.0,1.0,1.0,
"Western cultures are associated width auditory experiences concerning religious content , frequently related for sin .","Western cultures are associated with auditory experiences concerning religious content , frequently related to sin .","Western cultures are associated with auditory experiences concerning religious content , frequently related to sin .",1.0,1.0,1.0,
An delusion is commonly defined as an unrelenting sense of certainty maintained despite of strong contradictroy evidence .,A delusion is commonly defined as an unrelenting sense of certainty maintained despite strong contradictory evidence .,A delusion is commonly defined as an unrelenting sense of certainty maintained despite of strong contradictory evidence .,1.0,0.6666666666666666,0.9090909090909091,
A other type of catatonia is more of an outward presentation of the profoundly agitated state described from above .,The other type of catatonia is more of an outward presentation of the profoundly agitated state described above .,Another type of catatonia is more of an outward presentation of the profoundly agitated state described above .,0.5,0.5,0.5,
"It involves excessive and purposeless motor behaviour , as well as extreme mental preoccupation that prevents an intact experiences of reality .","It involves excessive and purposeless motor behaviour , as well as extreme mental preoccupation that prevents an intact experience of reality .","It involves excessive and purposeless motor behaviour , as well as extreme mental preoccupation that prevents an intact experience of reality .",1.0,1.0,1.0,
"Alogia are characterized by a lack of speech , often causing by an disruption of the throught process .","Alogia is characterized by a lack of speech , often caused by a disruption in the thought process .","Alogia is characterized by a lack of speech , often caused by a disruption of the through process .",0.75,0.6,0.7142857142857143,
"Apart with the lacks of content in a reply , the manner in which the person delivered the reply is affected as well .","Apart from the lack of content in a reply , the manner in which the person delivers the reply is affected as well .","Apart from the lack of content in a reply , the manner in which the person delivered the reply is affected as well .",1.0,0.6666666666666666,0.9090909090909091,
Studies have showed a correlation between alogic ratings in individuals and amount and duration of pauses in they speech when responding to a series of questions posed from the researcher .,Studies have shown a correlation between alogic ratings in individuals and the amount and duration of pauses in their speech when responding to a series of questions posed by the researcher .,Studies have showed a correlation betweenogic ratings in individuals and the amount and duration of pauses in their speech when responding to a series of questions posed by the researcher .,0.75,0.75,0.75,
"Spech vague , conveys little information , but is not grossly incoherent and the amount of speech is not reduced .","Speech is vague , conveys little information , but is not grossly incoherent and the amount of speech is not reduced .","Spech vague , conveys little information , but is not grossly incoherent and the amount of speech is not reduced .",1.0,0.0,0.0,
"They was found self-esteem is related to the connectivity of frontostriatal circuits , suggesting that feelings of self-worth may emerge from neural systems which integrate information about the self with positive affect and reward .","It was found that self-esteem is related to the connectivity of frontostriatal circuits , suggesting that feelings of self-worth may emerge from neural systems which integrate information about the self with positive affect and reward .","They found that self-esteem is related to the connectivity of frontostriatal circuits , suggesting that feelings of self-worth may emerge from neural systems which integrate information about the self with positive affect and reward .",0.5,0.5,0.5,
"This circuit is important executive functions including complex problem solving , learning new information , planning ahead , recalling remote memories , responding with appropriate behavior , and chronological ordering of event .","This circuit is important in executive functions including complex problem solving , learning new information , planning ahead , recalling remote memories , responding with appropriate behavior , and chronological ordering of events .","This circuit is important executive functions including complex problem solving , learning new information , planning ahead , recalling remote memories , responding with appropriate behavior , and chronological ordering of events .",1.0,0.5,0.8333333333333334,
These five circuits share the same anatomical structures .,These five circuits share same anatomical structures .,These five circuits share the same anatomical structures .,1.0,0.0,0.0,
"Also , there 're open connections to these circuits integrating informatin from other areas of the brain .","Also , there are open connections to these circuits integrating information from other areas of the brain .","Also , there are open connections to these circuits integrating informationati from other areas of the brain .",0.5,0.5,0.5,
Respect from others was believed to be more fragile and lost easily than inner self-esteem .,Respect from others was believed to be more fragile and easily lost than inner self-esteem .,Respect from others was believed to be more fragile and lost easily than inner self-esteem .,1.0,0.0,0.0,
Modern theories of self-esteem explore the reasons humans were motivated to maintain a high regard for they .,Modern theories of self-esteem explore the reasons humans are motivated to maintain a high regard for themselves .,Modern theories of self-esteem explore the reasons humans are motivated to maintain a high regard for themselves .,1.0,1.0,1.0,
"According with Terror Management Theory , self-esteem serves a protective function and reduce anxiety about life and death .","According to Terror Management Theory , self-esteem serves a protective function and reduces anxiety about life and death .","According to Terror Management Theory , self-esteem serves a protective function and reduces anxiety about life and death .",1.0,1.0,1.0,
"Thus , it affects the way we are and acts in world and the way we are related to everybody else .","Thus , it affects the way we are and acts in the world and the way we are related to everybody else .","Thus , it affects the way we are and act in the world and the way we are related to everybody else .",0.5,1.0,0.5555555555555556,
Experiences in a person life are a major source of how would that be the self-esteem develops .,Experiences in a person 's life are a major source of how self-esteem develops .,Experiences in a person 's life are a major source of how self-esteem develops .,1.0,1.0,1.0,
"In the early years of a child 's lives , parents have a significant influence on self-esteem and can be considered the main source from positive and negative experiences a children will have .","In the early years of a child 's life , parents have a significant influence on self-esteem and can be considered the main source of positive and negative experiences a child will have .","In the early years of a child 's life , parents have a significant influence on self-esteem and can be considered the main source of positive and negative experiences a child will have .",1.0,1.0,1.0,
A decrease is being seen from middle age to old age with varying findings on they is a small or large decrease .,A decrease is seen from middle age to old age with varying findings on if it is a small or large decrease .,A decrease is being seen from middle age to old age with varying findings it is a small or large decrease .,0.5,0.3333333333333333,0.45454545454545453,
Multiple cohort studies show there is not an difference in the life-span trajectory of self-esteem between generations due to societal changes such grade inflation in education or the presence of social media .,Multiple cohort studies show that there is not a difference in the life-span trajectory of self-esteem between generations due to societal changes such as grade inflation in education or the presence of social media .,Multiple cohort studies show there is not a difference in the life-span trajectory of self-esteem between generations due to societal changes such as grade inflation in education or the presence of social media .,1.0,0.6666666666666666,0.9090909090909091,
Families with higher and expendable income can acumulate wealth and focus in meeting immediate needs while being able to consume and enjoy luxuries and weather crises .,Families with higher and expendable income can accumulate wealth and focus on meeting immediate needs while being able to consume and enjoy luxuries and weather crises .,Families with higher and expendable income can accumulate wealth and focus on meeting immediate needs while being able to consume and enjoy luxuries and weather crises .,1.0,1.0,1.0,
These types of discrimination feed into the some other reasons why African Americans ends up have different starting points and therefore fewer assets .,These types of discrimination feed into the other reasons why African Americans end up having different starting points and therefore fewer assets .,These types of discrimination feed into some other reasons why African Americans end up having different starting points and therefore fewer assets .,0.6666666666666666,0.6666666666666666,0.6666666666666666,
Parents with an low socioeconomic status cannot afford to many of the health care resources which be the reason that their children may have a more advanced illness because of the lack of treatment .,Parents with a low socioeconomic status cannot afford many of the health care resources which is the reason that their children may have a more advanced illness because of the lack of treatment .,Parents with a low socioeconomic status cannot afford many of the health care resources which may be the reason that their children may have more advanced illnesses because of the lack of treatment .,0.5,0.6666666666666666,0.5263157894736842,
"This would lead to greater feelings of independent , making individuals of high SES less inclined to gain rapport with conversational partners because they are less likely to need their assistance in future .","This may lead to greater feelings of independence , making individuals of high SES less inclined to gain rapport with conversational partners because they are less likely to need their assistance in the future .","This would lead to greater feelings of independence , making individuals of high SES less inclined to gain rapport with conversational partners because they are less likely to need their assistance in future .",1.0,0.3333333333333333,0.7142857142857143,
"On contrast , increasing rates of obesity in a societal level are felt to be due to an easily accessible and palatable diet , increased reliance of cars , and mechanized manufacturing .","In contrast , increasing rates of obesity at a societal level are felt to be due to an easily accessible and palatable diet , increased reliance on cars , and mechanized manufacturing .","In contrast , increasing rates of obesity at a societal level are felt to be due to an easily accessible and palatable diet , increased reliance on cars , and mechanized manufacturing .",1.0,1.0,1.0,
"During the same period , an increase occurred on the average amount of food energy consume .","During the same period , an increase occurred in the average amount of food energy consumed .","During the same period , an increase occurred in the average amount of food energy consumed .",1.0,1.0,1.0,
"It is thought that in the developed countries , the wealthy are able to afford more nutritious food , they are under greater social pressure to remain slim , and have more opportunities along with greater expectations for physical fitness .","It is thought that in developed countries , the wealthy are able to afford more nutritious food . They are under greater social pressure to remain slim , and have more opportunities along with greater expectations for physical fitness .","It is thought that in the developed countries , the wealthy are able to afford more nutritious food , they are under greater social pressure to remain slim , and have more opportunities along with greater expectations for physical fitness .",1.0,0.0,0.0,
Even shorts sleep does increase weight gain it is unclear this is to a meaningful degrees or increasing sleep would been of benefit .,Even if shorts sleep does increase weight gain it is unclear if this is to a meaningful degree or increasing sleep would be of benefit .,Even short sleep does increase weight gain . It is unclear if this is to a meaningful degree or if increasing sleep would been of benefit .,0.4,0.5,0.4166666666666667,
Certain aspects of personality are associated to being obese .,Certain aspects of personality are associated with being obese .,Certain aspects of personality are associated to being obese .,1.0,0.0,0.0,
Yet academia study of loneliness was sparse until late twentieth centary .,Yet academic study of loneliness was sparse until the late twentieth century .,Yet academia study of loneliness was sparse until the late twentieth century .,1.0,0.6666666666666666,0.9090909090909091,
"Chronic loneliness on the other hands is widely considered to be harmful , with numerous reviews and meta-studies concluding they is a significant risk factor for poor mental and physical health outcomes .","Chronic loneliness on the other hand is widely considered harmful , with numerous reviews and meta-studies concluding it is a significant risk factor for poor mental and physical health outcomes .","Chronic loneliness on the other hand is widely considered to be harmful , with numerous reviews and meta-studies concluding it is a significant risk factor for poor mental and physical health outcomes .",1.0,0.6666666666666666,0.9090909090909091,
The loneliness that triggers suicidal tendencies impact all facet of society .,The loneliness that triggers suicidal tendencies impacts all facets of society .,The loneliness that triggers suicidal tendencies impacts all facets of society .,1.0,1.0,1.0,
"Nostalgia has also been found to have a restoative effect , counteracting loneliness by increasing perceived social support .","Nostalgia has also been found to have a restorative effect , counteracting loneliness by increasing perceived social support .","Nostalgia has also been found to have a restorative effect , counteracting loneliness by increasing perceived social support .",1.0,1.0,1.0,
"Although nostalgia is often triggered by negative feelings , but its results in increasing one 's mood and heightening positive emotions , which can stem from feelings of warmth or coping resulting from nostalgic reflections .","Although nostalgia is often triggered by negative feelings , it results in increasing one 's mood and heightening positive emotions , which can stem from feelings of warmth or coping resulting from nostalgic reflections .","Although nostalgia is often triggered by negative feelings , it results in increasing one 's mood and heightening positive emotions , which can stem from feelings of warmth or coping resulting from nostalgic reflections .",1.0,1.0,1.0,
"Additionally , in a second study conducted , some participant were exposed to nostalgic engagement and reflection while a other group was not .","Additionally , in a second study conducted , some participants were exposed to nostalgic engagement and reflection while the other group was not .","Additionally , in a second study conducted , some participants were exposed to nostalgic engagement and reflection while the other group were not .",0.6666666666666666,1.0,0.7142857142857142,
"Thirdly , the researchers find that threatened meaning can even act as a triger for nostalgia , thus increasing one 's nostalgic reflections .","Thirdly , the researchers found that threatened meaning can even act as a trigger for nostalgia , thus increasing one 's nostalgic reflections .","Thirdly , the researchers find that threatened meaning can even act as a trigger for nostalgia , thus increasing one 's nostalgic reflections .",1.0,0.5,0.8333333333333334,
"In a 2014 study conduct by Routledge , he and a team observed that the more people reported have major disruptions and uncertainties in they lives , the more their nostalgically longed for the past .","In a 2014 study conducted by Routledge , he and a team observed that the more people reported having major disruptions and uncertainties in their lives , the more they nostalgically longed for the past .","In a 2014 study conducted by Routledge , he and a team observed that the more people reported having major disruptions and uncertainties in their lives , the more their nostalgically long for the past .",0.75,0.75,0.75,
"Aesthetics , a non very tidy intellectual discipline , is a heterogeneous collection of problems that concern an arts primarily but also relate about nature .","Aesthetics , a not very tidy intellectual discipline , is a heterogeneous collection of problems that concern the arts primarily but also relate to nature .","Aesthetics , a non very tidy intellectual discipline , is a heterogeneous collection of problems that concern the arts primarily but also relate to nature .",1.0,0.6666666666666666,0.9090909090909091,
It 's what a thing means or symbolizes to us that is often what we are judging .,It is what a thing means or symbolizes for us that is often what we are judging .,It 's what a thing means or symbolizes to us that is often what we are judging .,1.0,0.0,0.0,
"For instant , the source of a painting 's beauty has a different characters to that of beautiful music , suggesting his or her aesthetics differ in kind .","For instance , the source of a painting 's beauty has a different character to that of beautiful music , suggesting their aesthetics differ in kind .","For instance , the source of a painting 's beauty has a different character to that of beautiful music , suggesting his or her aesthetics differ in kind .",1.0,0.6666666666666666,0.9090909090909091,
"Another very concrete example describes a aesthetical pleasing human face whose proportions can be described by very few bits of information , drawing inspiration from less detailed 15th century proportion studies by Leonardo da Vinci and Albrecht Dürer .","Another very concrete example describes an aesthetically pleasing human face whose proportions can be described by very few bits of information , drawing inspiration from less detailed 15th century proportion studies by Leonardo da Vinci and Albrecht Dürer .","Another very concrete example describes an aesthetical pleasing human face whose proportions can be described by very few bits of information , drawing inspiration from less detailed 15th century proportion studies by Leonardo da Vinci and Albrecht Dürer .",1.0,0.5,0.8333333333333334,
Each presents perspectives that widely shared by published scholars .,Each presents perspectives that are widely shared by published scholars .,Each presents perspectives that are widely shared by published scholars .,1.0,1.0,1.0,
Much modern theorists have stated that this ideal cannot be achieved without analysing additional factors .,Many modern theorists have stated that this ideal cannot be achieved without analysing additional factors .,Much modern theorists have stated that this ideal cannot be achieved without analysing additional factors .,1.0,0.0,0.0,
"Amongst the assortment of perspectives commonly regard as coherence theory , theorists differ on question of whether coherence entails many possible ture systems of thought or only a single absolute system .","Among the assortment of perspectives commonly regarded as coherence theory , theorists differ on the question of whether coherence entails many possible true systems of thought or only a single absolute system .","Amongst the assortment of perspectives commonly regarded as coherence theory , theorists differ on the question of whether coherence entails many possibleure systems of thought or only a single absolute system .",0.6666666666666666,0.5,0.625,
"Consensus theory held that truth is whatever is agreed upon , or in some versions , might come to be agreed upon , by some specified group .","Consensus theory holds that truth is whatever is agreed upon , or in some versions , might come to be agreed upon , by some specified group .","The consensus theory held that truth is whatever is agreed upon , or in some versions , might come to be agreed upon , by some specified group .",0.0,0.0,0.0,
It sometimes hard to find out one has this disease .,It is sometimes hard to find out if one has this disease .,It is sometimes hard to find out if one has this disease .,1.0,1.0,1.0,
In 1840 a Royal Commission published its findings on the state in conditions for the workers of the mining industry that documented appallingly the dangerous environment that they had to work in and the high frequency of accidents .,In 1840 a Royal Commission published its findings on the state of conditions for the workers of the mining industry that documented the appallingly dangerous environment that they had to work in and the high frequency of accidents .,In 1840 a Royal Commission published its findings on the state of conditions for the workers of the mining industry that documented appallingly the dangerous environment that they had to work in and the high frequency of accidents .,1.0,0.5,0.8333333333333334,
"As labor movements arose in response to workers concerns in the wake of the industrial revolution , worker 's health entered consideration as a labor-related issue .","As labor movements arose in response to worker concerns in the wake of the industrial revolution , worker 's health entered consideration as a labor-related issue .","As labor movements arose in response to workers ' concerns in the wake of the industrial revolution , worker 's health entered consideration as a labor-related issue .",0.0,0.0,0.0,


"Gene ID","source_id","Organism","Genomic Location (Gene)","Product Description","Input Ortholog(s)","Paralog count","Ortholog count","Gene has Unmatched Transcripts","Gene Name or Symbol","gene_source_id","Previous ID(s)","Transcript Product Description","Chromosome","Genomic Location (Transcript)","Genomic Sequence ID","Ortholog Group","Protein Length","CDS Length","Molecular Weight","Isoelectric Point","Interpro ID","Interpro Description","PFam ID","PFam Description","PirSF ID","PirSF Description","Prositefamilies ID","Prositefamilies Description","Smart ID","Smart Description","Superfamily ID","Superfamily Description","TigrFam ID","TigrFam Description","GeneDB Updated Product Name"
"AK88_01372","AK88_01372-t30_1","Plasmodium fragile strain nilgiri","KQ001656:20,247..21,962(-)","hypothetical protein","C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","AK88_01372","null","hypothetical protein","Not Assigned","KQ001656:20247..21962(-)","KQ001656","OG6r1_100885","492","1479","57388","4.07","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"C922_03194","C922_03194-t30_1","Plasmodium inui San Antonio 1","KI965472:10,499..12,021(-)","hypothetical protein","AK88_01372,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","C922_03194","null","hypothetical protein","Not Assigned","KI965472:10499..12021(-)","KI965472","OG6r1_100885","418","1257","48456","4.29","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PBANKA_0100500","PBANKA_0100500.1","Plasmodium berghei ANKA","PbANKA_01_v3:40,052..41,483(-)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PBANKA_0100500","Previous IDs: PB106914.00.0;PB402406.00.0;PBANKA_010050","PIR protein","01","PbANKA_01_v3:40052..41483(-)","PbANKA_01_v3","OG6r1_100885","351","1056","41190","4.56","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PCHAS_0101200","PCHAS_0101200.1","Plasmodium chabaudi chabaudi","PCHAS_01_v3:50,365..51,801(-)","PIR protein","AK88_01372,C922_03194,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PCHAS_0101200","Previous IDs: PC400319.00.0;PC400436.00.0;PCAS_010120;PCHAS_010120","PIR protein","01","PCHAS_01_v3:50365..51801(-)","PCHAS_01_v3","OG6r1_100885","351","1056","41436","4.46","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PCOAH_00037060","PCOAH_00037060-t30_1","Plasmodium coatneyi Hackeri","CP016249:2,514,805..2,517,179(+)","Uncharacterized protein","AK88_01372,C922_03194,PCHAS_0101200,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PCOAH_00037060","null","Uncharacterized protein","11","CP016249:2514805..2517179(+)","CP016249","OG6r1_100885","609","1830","70782","3.69","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","SSF48371","ARM repeat","N/A","N/A","null"
"PCYB_115510","PCYB_115510-t26_1","Plasmodium cynomolgi strain B","DF157103:2,066,721..2,068,360(+)","VIR-like CYIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PCYB_115510","null","VIR-like CYIR protein","11","DF157103:2066721..2068360(+)","DF157103","OG6r1_100885","398","1197","46207","4.17","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PKNH_1149300","PKNH_1149300.1","Plasmodium knowlesi strain H","PKNH_11_v2:2,310,993..2,313,115(+)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PKNH_1149300","Previous IDs: PK14_3515w;PKH_114850","PIR protein","11","PKNH_11_v2:2310993..2313115(+)","PKNH_11_v2","OG6r1_100885","532","1599","62431","3.87","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PKNOH_S130216000","PKNOH_S130216000-t35_1","Plasmodium knowlesi strain Malayan Strain Pk1 A","NETL01000027:2,343,552..2,345,674(+)","KIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PKNOH_S130216000","null","KIR protein","Not Assigned","NETL01000027:2343552..2345674(+)","NETL01000027","OG6r1_100885","532","1599","62431","3.87","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PVL_110036700","PVL_110036700-t42_1","Plasmodium vivax-like Pvl01","PVL_11_v1:1,619,441..1,620,831(+)","VIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PVL_110036700","null","VIR protein","11","PVL_11_v1:1619441..1620831(+)","PVL_11_v1","OG6r1_100885","274","825","31528","4.34","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PVP01_1147700","PVP01_1147700.1","Plasmodium vivax P01","PvP01_11_v1:2,044,529..2,046,148(+)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PVP01_1147700","null","PIR protein","11","PvP01_11_v1:2044529..2046148(+)","PvP01_11_v1","OG6r1_100885","392","1179","45508","4.29","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PVX_113230","PVX_113230.1","Plasmodium vivax Sal-1","Pv_Sal1_chr11:2,005,940..2,007,559(+)","variable surface protein Vir14-related","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PVX_113230","Previous IDs: Pv113230","variable surface protein Vir14-related","11","Pv_Sal1_chr11:2005940..2007559(+)","Pv_Sal1_chr11","OG6r1_100885","392","1179","45508","4.29","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PY06119","PY06119-t26_1","Plasmodium yoelii yoelii 17XNL","AABL01002035:2,759..4,186(+)","hypothetical protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PY06119","Previous IDs: 2042.m00048","hypothetical protein","Not Assigned","AABL01002035:2759..4186(+)","AABL01002035","OG6r1_100885","316","951","37098","4.61","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PY17X_0102100","PY17X_0102100.1","Plasmodium yoelii yoelii 17X","Py17X_01_v3:170,042..171,469(-)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PY17X_0102100","null","PIR protein","1","Py17X_01_v3:170042..171469(-)","Py17X_01_v3","OG6r1_100885","351","1056","41123","4.57","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PYYM_0101500","PYYM_0101500.1","Plasmodium yoelii yoelii YM","PyYM_01_v1:58,496..59,923(-)","YIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PYYM_0101500","null","YIR protein","01","PyYM_01_v1:58496..59923(-)","PyYM_01_v1","OG6r1_100885","351","1056","41123","4.57","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PcyM_1151000","PcyM_1151000-t36_1","Plasmodium cynomolgi strain M","PcyM_11:2,083,120..2,084,759(+)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PmUG01_11061500,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PcyM_1151000","null","PIR protein","11","PcyM_11:2083120..2084759(+)","PcyM_11","OG6r1_100885","398","1197","46207","4.17","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PmUG01_11061500","PmUG01_11061500.1","Plasmodium malariae UG01","PmUG01_11_v1:2,589,145..2,590,611(+)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PocGH01_00042800,YYE_04766,YYG_04764","0","18","no","null","PmUG01_11061500","null","PIR protein","11","PmUG01_11_v1:2589145..2590611(+)","PmUG01_11_v1","OG6r1_100885","346","1041","41023","4.71","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"PocGH01_00042800","PocGH01_00042800.1","Plasmodium ovale curtisi GH01","PocGH01_00_v1_contig_48:13,738..15,039(-)","PIR protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,YYE_04766,YYG_04764","0","18","no","null","PocGH01_00042800","null","PIR protein","Not Assigned","PocGH01_00_v1_contig_48:13738..15039(-)","PocGH01_00_v1_contig_48","OG6r1_100885","381","1146","44445","4.91","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"YYE_04766","YYE_04766-t30_1","Plasmodium vinckei vinckei strain vinckei","KL446957:28,801..30,236(-)","hypothetical protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYG_04764","0","18","no","null","YYE_04766","null","hypothetical protein","Not Assigned","KL446957:28801..30236(-)","KL446957","OG6r1_100885","351","1056","41305","4.34","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"
"YYG_04764","YYG_04764-t30_1","Plasmodium vinckei petteri strain CR","KI965407:494,449..495,865(+)","hypothetical protein","AK88_01372,C922_03194,PCHAS_0101200,PCOAH_00037060,PCYB_115510,PKNH_1149300,PKNOH_S130216000,PVL_110036700,PVP01_1147700,PVX_113230,PY06119,PY17X_0102100,PYYM_0101500,PcyM_1151000,PmUG01_11061500,PocGH01_00042800,YYE_04766","0","18","no","null","YYG_04764","null","hypothetical protein","Not Assigned","KI965407:494449..495865(+)","KI965407","OG6r1_100885","351","1056","41305","4.4","N/A","N/A","PF05795","Plasmodium vivax Vir protein","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","N/A","null"


,Accession Number,Average Operon Size,File Name,Max Operon Size,Min Operon Size,Number of Operons,Organism,Species
0,GCF_000495455.2,5188.333333333333,GCF_000495455.2_ASM49545v2_genomic.gbff.gz,5193,5173,6,Pseudomonas putida S12,Pseudomonas putida
1,GCF_003851165.1,5210.2,GCF_003851165.1_ASM385116v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
2,GCF_002021815.1,5098.4,GCF_002021815.1_ASM202181v1_genomic.gbff.gz,5192,4958,5,Pseudomonas parafulva,Pseudomonas parafulva
3,GCF_000344355.2,5282.6,GCF_000344355.2_ASM34435v2_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae pv. actinidiae ICMP 18708,Pseudomonas syringae
4,GCF_900235865.1,5287.2,GCF_900235865.1_CFBP2118_genomic.gbff.gz,5463,5239,5,Pseudomonas syringae pv. syringae,Pseudomonas syringae
5,GCF_003290365.1,5202.666666666667,GCF_003290365.1_ASM329036v1_genomic.gbff.gz,5347,5131,6,Pseudomonas putida,Pseudomonas putida
6,GCF_001516205.2,5157.25,GCF_001516205.2_ASM151620v2_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
7,GCF_003850345.1,5210.2,GCF_003850345.1_ASM385034v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
8,GCF_003612935.1,5273.8,GCF_003612935.1_ASM361293v1_genomic.gbff.gz,5453,5229,5,Pseudomonas fluorescens,Pseudomonas fluorescens
9,GCF_003850365.1,5210.2,GCF_003850365.1_ASM385036v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
10,GCF_003047145.2,5187.0,GCF_003047145.2_ASM304714v2_genomic.gbff.gz,5204,5181,4,Pseudomonas stutzeri,Pseudomonas stutzeri
11,GCF_000267545.1,5205.25,GCF_000267545.1_ASM26754v1_genomic.gbff.gz,5206,5205,4,Pseudomonas stutzeri CCUG 29243,Pseudomonas stutzeri
12,GCF_002192475.1,5156.75,GCF_002192475.1_ASM219247v1_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
13,GCF_900149285.1,5156.75,GCF_900149285.1_PcyII-10_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
14,GCF_003851365.1,5261.4,GCF_003851365.1_ASM385136v1_genomic.gbff.gz,5617,5165,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis
15,GCF_001045685.1,5157.0,GCF_001045685.1_ASM104568v1_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa DSM 50071 = NBRC 12689,Pseudomonas aeruginosa
16,GCF_000007565.2,5105.4,GCF_000007565.2_ASM756v2_genomic.gbff.gz,5245,4955,5,Pseudomonas putida KT2440,Pseudomonas putida
17,GCF_001792855.1,5157.5,GCF_001792855.1_ASM179285v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
18,GCF_003798125.1,5157.25,GCF_003798125.1_ASM379812v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
19,GCF_001023535.1,5240.4,GCF_001023535.1_ASM102353v1_genomic.gbff.gz,5417,5178,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
20,GCF_000262325.2,5254.166666666667,GCF_000262325.2_ASM26232v2_genomic.gbff.gz,5437,5212,6,Pseudomonas fluorescens A506,Pseudomonas fluorescens
21,GCF_003008495.1,5180.0,GCF_003008495.1_ASM300849v1_genomic.gbff.gz,5180,5180,4,Pseudomonas stutzeri,Pseudomonas stutzeri
22,GCF_000183645.1,5119.0,GCF_000183645.1_ASM18364v1_genomic.gbff.gz,5260,4968,5,Pseudomonas putida BIRD-1,Pseudomonas putida
23,GCF_000733715.2,5196.0,GCF_000733715.2_ASM73371v2_genomic.gbff.gz,5196,5196,4,Pseudomonas mendocina S5.2,Pseudomonas mendocina
24,GCF_001721825.1,5157.25,GCF_001721825.1_ASM172182v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
25,GCF_001542835.1,5157.25,GCF_001542835.1_ASM154283v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
26,GCF_001618925.1,5157.5,GCF_001618925.1_ASM161892v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
27,GCF_000016565.1,5216.75,GCF_000016565.1_ASM1656v1_genomic.gbff.gz,5217,5216,4,Pseudomonas mendocina ymp,Pseudomonas mendocina
28,GCF_003850485.1,5213.2,GCF_003850485.1_ASM385048v1_genomic.gbff.gz,5391,5166,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
29,GCF_002844145.1,5213.8,GCF_002844145.1_ASM284414v1_genomic.gbff.gz,5401,5133,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
30,GCF_001708465.1,5215.0,GCF_001708465.1_ASM170846v1_genomic.gbff.gz,5215,5215,1,Pseudomonas fluorescens,Pseudomonas fluorescens
31,GCF_001516245.2,5156.25,GCF_001516245.2_ASM151624v2_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
32,GCF_001721765.1,5157.25,GCF_001721765.1_ASM172176v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
33,GCF_900235835.1,5286.6,GCF_900235835.1_CFBP3846_genomic.gbff.gz,5465,5242,5,Pseudomonas syringae pv. avii,Pseudomonas syringae
34,GCF_000271965.2,5185.333333333333,GCF_000271965.2_ASM27196v2_genomic.gbff.gz,5194,5181,6,Pseudomonas putida SJTE-1,Pseudomonas putida
35,GCF_900095805.1,5157.5,GCF_900095805.1_PA14Or_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
36,GCF_002006545.1,5241.8,GCF_002006545.1_ASM200654v1_genomic.gbff.gz,5418,5197,5,Pseudomonas protegens,Pseudomonas protegens
37,GCF_002104595.1,5156.5,GCF_002104595.1_ASM210459v1_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
38,GCF_001722045.1,5157.0,GCF_001722045.1_ASM172204v1_genomic.gbff.gz,5158,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
39,GCF_001281365.1,5278.8,GCF_001281365.1_ASM128136v1_genomic.gbff.gz,5457,5234,5,Pseudomonas syringae UMAF0158,Pseudomonas syringae
40,GCF_002025705.1,5066.2,GCF_002025705.1_ASM202570v1_genomic.gbff.gz,5211,4973,5,Pseudomonas putida,Pseudomonas putida
41,GCF_003851205.1,5210.2,GCF_003851205.1_ASM385120v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
42,GCF_002442555.1,5209.25,GCF_002442555.1_ASM244255v1_genomic.gbff.gz,5217,5188,4,Pseudomonas mendocina,Pseudomonas mendocina
43,GCF_003852025.1,5285.166666666667,GCF_003852025.1_ASM385202v1_genomic.gbff.gz,5519,5215,6,Pseudomonas synxantha,Pseudomonas synxantha
44,GCF_001518975.1,5157.0,GCF_001518975.1_ASM151897v1_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
45,GCF_001632245.1,5156.25,GCF_001632245.1_ASM163224v1_genomic.gbff.gz,5157,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
46,GCF_000498395.2,5109.6,GCF_000498395.2_ASM49839v3_genomic.gbff.gz,5185,4996,5,Pseudomonas putida S13.1.2,Pseudomonas putida
47,GCF_003940785.1,5189.857142857143,GCF_003940785.1_ASM394078v1_genomic.gbff.gz,5409,4990,7,Pseudomonas entomophila,Pseudomonas entomophila
48,GCF_900475215.1,5238.166666666667,GCF_900475215.1_42727_B01_genomic.gbff.gz,5456,5049,6,Pseudomonas fluorescens,Pseudomonas fluorescens
49,GCF_900636845.1,5182.0,GCF_900636845.1_44858_G01_genomic.gbff.gz,5182,5182,4,Pseudomonas stutzeri,Pseudomonas stutzeri
50,GCF_003851265.1,5212.2,GCF_003851265.1_ASM385126v1_genomic.gbff.gz,5398,5163,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
51,GCF_000012265.1,5249.8,GCF_000012265.1_ASM1226v1_genomic.gbff.gz,5433,5204,5,Pseudomonas protegens Pf-5,Pseudomonas protegens
52,GCF_001548135.1,5157.25,GCF_001548135.1_ASM154813v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
53,GCF_900636645.1,5118.4,GCF_900636645.1_43295_H02_genomic.gbff.gz,5258,4968,5,Pseudomonas putida,Pseudomonas putida
54,GCF_003851645.1,5264.666666666667,GCF_003851645.1_ASM385164v1_genomic.gbff.gz,5440,5202,6,Pseudomonas orientalis,Pseudomonas orientalis
55,GCF_003228315.1,5233.0,GCF_003228315.1_ASM322831v1_genomic.gbff.gz,5418,5196,6,Pseudomonas putida,Pseudomonas putida
56,GCF_002442855.1,5156.0,GCF_002442855.1_ASM244285v1_genomic.gbff.gz,5156,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
57,GCF_004006335.1,5249.0,GCF_004006335.1_ASM400633v1_genomic.gbff.gz,5443,5207,6,Pseudomonas syringae,Pseudomonas syringae
58,GCF_003025345.2,5154.75,GCF_003025345.2_ASM302534v2_genomic.gbff.gz,5155,5154,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
59,GCF_900289125.1,5285.2,GCF_900289125.1_CFBP2116_finsihed_replicons_genomic.gbff.gz,5459,5238,5,Pseudomonas syringae,Pseudomonas syringae
60,GCF_003940825.1,5194.0,GCF_003940825.1_ASM394082v1_genomic.gbff.gz,5412,4994,7,Pseudomonas entomophila,Pseudomonas entomophila
61,GCF_000204295.1,5197.0,GCF_000204295.1_ASM20429v1_genomic.gbff.gz,5197,5197,4,Pseudomonas mendocina NK-01,Pseudomonas mendocina
62,GCF_002905815.2,5242.2,GCF_002905815.2_ASM290581v2_genomic.gbff.gz,5255,5239,5,Pseudomonas syringae pv. syringae,Pseudomonas syringae
63,GCF_003851495.1,5263.833333333333,GCF_003851495.1_ASM385149v1_genomic.gbff.gz,5441,5186,6,Pseudomonas synxantha,Pseudomonas synxantha
64,GCF_003851805.1,5210.2,GCF_003851805.1_ASM385180v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
65,GCF_003850445.1,5212.6,GCF_003850445.1_ASM385044v1_genomic.gbff.gz,5390,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
66,GCF_001457615.1,5157.0,GCF_001457615.1_NCTC10332_genomic.gbff.gz,5160,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
67,GCF_003851305.1,5222.0,GCF_003851305.1_ASM385130v1_genomic.gbff.gz,5403,5176,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
68,GCF_900636825.1,5305.166666666667,GCF_900636825.1_44858_E01_genomic.gbff.gz,5678,5219,6,Pseudomonas fluorescens,Pseudomonas fluorescens
69,GCF_900636735.1,5157.0,GCF_900636735.1_43941_C01_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
70,GCF_001447845.1,5156.5,GCF_001447845.1_ASM144784v1_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
71,GCF_000016865.1,5142.166666666667,GCF_000016865.1_ASM1686v1_genomic.gbff.gz,5194,4981,6,Pseudomonas putida F1,Pseudomonas putida
72,GCF_001708485.1,3147.0,GCF_001708485.1_ASM170848v1_genomic.gbff.gz,3147,3147,1,Pseudomonas fluorescens,Pseudomonas fluorescens
73,GCF_000585995.1,5278.4,GCF_000585995.1_ASM58599v1_genomic.gbff.gz,5468,5212,5,Pseudomonas brassicacearum,Pseudomonas brassicacearum
74,GCF_001708445.1,5215.0,GCF_001708445.1_ASM170844v1_genomic.gbff.gz,5215,5215,1,Pseudomonas fluorescens,Pseudomonas fluorescens
75,GCF_000510305.1,5157.5,GCF_000510305.1_ASM51030v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa SCV20265,Pseudomonas aeruginosa
76,GCF_000195105.1,5182.0,GCF_000195105.1_ASM19510v1_genomic.gbff.gz,5182,5182,4,Pseudomonas stutzeri DSM 4166,Pseudomonas stutzeri
77,GCF_900070375.1,5158.25,GCF_900070375.1_PAO1OR_genomic.gbff.gz,5159,5158,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
78,GCF_002934065.1,5260.0,GCF_002934065.1_ASM293406v1_genomic.gbff.gz,5438,5211,6,Pseudomonas orientalis,Pseudomonas orientalis
79,GCF_900636635.1,5157.0,GCF_900636635.1_43721_H02_genomic.gbff.gz,5157,5157,4,Pseudomonas fluorescens,Pseudomonas fluorescens
80,GCF_003851525.1,5272.5,GCF_003851525.1_ASM385152v1_genomic.gbff.gz,5450,5216,6,Pseudomonas synxantha,Pseudomonas synxantha
81,GCF_001913215.1,5282.0,GCF_001913215.1_ASM191321v1_genomic.gbff.gz,5460,5237,5,Pseudomonas syringae pv. actinidiae,Pseudomonas syringae
82,GCF_003851785.1,5225.2,GCF_003851785.1_ASM385178v1_genomic.gbff.gz,5406,5180,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
83,GCF_001515845.2,4657.5,GCF_001515845.2_ASM151584v2_genomic.gbff.gz,5158,3158,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
84,GCF_001900225.1,5071.666666666667,GCF_001900225.1_ASM190022v1_genomic.gbff.gz,5158,4899,3,Pseudomonas aeruginosa,Pseudomonas aeruginosa
85,GCF_001874645.1,5201.857142857143,GCF_001874645.1_ASM187464v1_genomic.gbff.gz,5283,5170,7,Pseudomonas frederiksbergensis,Pseudomonas frederiksbergensis
86,GCF_003813025.1,5157.25,GCF_003813025.1_ASM381302v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
87,GCF_000648735.3,5282.6,GCF_000648735.3_ASM64873v3_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae pv. actinidiae ICMP 18884,Pseudomonas syringae
88,GCF_000264665.2,5142.333333333333,GCF_000264665.2_ASM26466v2_genomic.gbff.gz,5205,4981,6,Pseudomonas putida ND6,Pseudomonas putida
89,GCF_001602135.1,5214.2,GCF_001602135.1_ASM160213v1_genomic.gbff.gz,5394,5167,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
90,GCF_000829275.1,5156.0,GCF_000829275.1_ASM82927v1_genomic.gbff.gz,5156,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
91,GCF_000524595.1,5157.75,GCF_000524595.1_ASM52459v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa YL84,Pseudomonas aeruginosa
92,GCF_001721845.1,5156.0,GCF_001721845.1_ASM172184v1_genomic.gbff.gz,5157,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
93,GCF_001515585.1,5209.142857142857,GCF_001515585.1_ASM151558v2_genomic.gbff.gz,5412,5154,7,Pseudomonas putida,Pseudomonas putida
94,GCF_000828695.1,5250.4,GCF_000828695.1_ASM82869v1_genomic.gbff.gz,5433,5204,5,Pseudomonas protegens Cab57,Pseudomonas protegens
95,GCF_003850525.1,5212.4,GCF_003850525.1_ASM385052v1_genomic.gbff.gz,5390,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
96,GCF_003851555.1,5256.666666666667,GCF_003851555.1_ASM385155v1_genomic.gbff.gz,5439,5215,6,Pseudomonas synxantha,Pseudomonas synxantha
97,GCF_001913235.1,5282.6,GCF_001913235.1_ASM191323v1_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae pv. actinidiae,Pseudomonas syringae
98,GCF_003851605.1,5256.0,GCF_003851605.1_ASM385160v1_genomic.gbff.gz,5450,5215,6,Pseudomonas orientalis,Pseudomonas orientalis
99,GCF_003812885.1,5155.75,GCF_003812885.1_ASM381288v1_genomic.gbff.gz,5156,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
100,GCF_003055645.1,5260.833333333333,GCF_003055645.1_ASM305564v1_genomic.gbff.gz,5472,5182,6,Pseudomonas fluorescens,Pseudomonas fluorescens
101,GCF_000800255.1,4842.857142857143,GCF_000800255.1_ASM80025v1_genomic.gbff.gz,5437,3151,7,Pseudomonas parafulva,Pseudomonas parafulva
102,GCF_003991465.1,5159.25,GCF_003991465.1_ASM399146v1_genomic.gbff.gz,5160,5159,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
103,GCF_003851385.1,5212.2,GCF_003851385.1_ASM385138v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis
104,GCF_000271985.2,5157.5,GCF_000271985.2_ASM27198v2_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa SJTD-1,Pseudomonas aeruginosa
105,GCF_001307155.1,5212.5,GCF_001307155.1_ASM130715v1_genomic.gbff.gz,5244,5203,6,Pseudomonas fluorescens,Pseudomonas fluorescens
106,GCF_003851955.1,5216.2,GCF_003851955.1_ASM385195v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis
107,GCF_000698865.1,4807.6,GCF_000698865.1_ASM69886v1_genomic.gbff.gz,5165,3378,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
108,GCF_000452705.1,5314.6,GCF_000452705.1_ASM45270v3_genomic.gbff.gz,5463,5238,5,Pseudomonas syringae CC1557,Pseudomonas syringae
109,GCF_002812905.1,5155.75,GCF_002812905.1_ASM281290v1_genomic.gbff.gz,5156,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
110,GCF_003851985.1,5213.2,GCF_003851985.1_ASM385198v1_genomic.gbff.gz,5394,5168,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
111,GCF_002205375.1,5156.5,GCF_002205375.1_ASM220537v1_genomic.gbff.gz,5158,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
112,GCF_000012445.1,5253.0,GCF_000012445.1_ASM1244v1_genomic.gbff.gz,5439,5208,6,Pseudomonas fluorescens Pf0-1,Pseudomonas fluorescens
113,GCF_000968415.2,5253.5,GCF_000968415.2_ASM96841v2_genomic.gbff.gz,5449,5214,6,Pseudomonas synxantha,Pseudomonas synxantha
114,GCF_000359505.1,5158.0,GCF_000359505.1_ASM35950v1_genomic.gbff.gz,5158,5158,4,Pseudomonas aeruginosa B136-33,Pseudomonas aeruginosa
115,GCF_003851585.1,5259.333333333333,GCF_003851585.1_ASM385158v1_genomic.gbff.gz,5451,5204,6,Pseudomonas orientalis,Pseudomonas orientalis
116,GCF_003049825.1,5216.666666666667,GCF_003049825.1_ASM304982v1_genomic.gbff.gz,5428,4991,6,Pseudomonas koreensis,Pseudomonas koreensis
117,GCF_000510325.1,5030.0,GCF_000510325.1_ASM51032v1_genomic.gbff.gz,5215,4993,6,Pseudomonas monteilii SB3101,Pseudomonas monteilii
118,GCF_000452445.2,5285.8,GCF_000452445.2_ASM45244v3_genomic.gbff.gz,5477,5238,5,Pseudomonas syringae pv. pisi str. PP1,Pseudomonas syringae
119,GCF_003193645.1,5155.25,GCF_003193645.1_ASM319364v1_genomic.gbff.gz,5156,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
120,GCF_001746815.1,5287.2,GCF_001746815.1_ASM174681v1_genomic.gbff.gz,5448,5241,5,Pseudomonas brassicacearum,Pseudomonas brassicacearum
121,GCF_002966555.1,5286.8,GCF_002966555.1_ASM296655v1_genomic.gbff.gz,5465,5242,5,Pseudomonas syringae pv. tomato,Pseudomonas syringae
122,GCF_000007805.1,5231.0,GCF_000007805.1_ASM780v1_genomic.gbff.gz,5231,5231,5,Pseudomonas syringae pv. tomato str. DC3000,Pseudomonas syringae
123,GCF_000219705.1,5031.666666666667,GCF_000219705.1_ASM21970v1_genomic.gbff.gz,5217,4994,6,Pseudomonas putida S16,Pseudomonas putida
124,GCF_003206535.1,5156.75,GCF_003206535.1_ASM320653v1_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
125,GCF_003850405.1,5212.6,GCF_003850405.1_ASM385040v1_genomic.gbff.gz,5390,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
126,GCF_001648195.1,5214.0,GCF_001648195.1_ASM164819v1_genomic.gbff.gz,5214,5214,4,Pseudomonas stutzeri,Pseudomonas stutzeri
127,GCF_003852045.1,5266.5,GCF_003852045.1_ASM385204v1_genomic.gbff.gz,5451,5215,6,Pseudomonas orientalis,Pseudomonas orientalis
128,GCF_000590475.1,5226.0,GCF_000590475.1_ASM59047v1_genomic.gbff.gz,5226,5226,4,Pseudomonas stutzeri,Pseudomonas stutzeri
129,GCF_001594325.2,5157.5,GCF_001594325.2_ASM159432v2_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
130,GCF_900636545.1,5204.25,GCF_900636545.1_42727_C01_genomic.gbff.gz,5213,5196,4,Pseudomonas mendocina,Pseudomonas mendocina
131,GCF_000661915.1,5222.0,GCF_000661915.1_ASM66191v1_genomic.gbff.gz,5222,5222,4,Pseudomonas stutzeri,Pseudomonas stutzeri
132,GCF_002208745.2,5249.0,GCF_002208745.2_ASM220874v2_genomic.gbff.gz,5433,5202,5,Pseudomonas protegens,Pseudomonas protegens
133,GCF_000009225.2,5261.0,GCF_000009225.2_ASM922v1_genomic.gbff.gz,5441,5216,5,Pseudomonas fluorescens SBW25,Pseudomonas fluorescens
134,GCF_003369775.1,5156.0,GCF_003369775.1_ASM336977v1_genomic.gbff.gz,5156,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
135,GCF_003952685.1,5235.428571428572,GCF_003952685.1_ASM395268v1_genomic.gbff.gz,5451,5030,7,Pseudomonas stutzeri,Pseudomonas stutzeri
136,GCF_003626995.1,5280.4,GCF_003626995.1_ASM362699v1_genomic.gbff.gz,5456,5231,5,Pseudomonas fluorescens,Pseudomonas fluorescens
137,GCF_001722025.1,5157.25,GCF_001722025.1_ASM172202v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
138,GCF_003332705.2,5157.0,GCF_003332705.2_ASM333270v2_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
139,GCF_001606045.1,5157.25,GCF_001606045.1_ASM160604v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
140,GCF_001767335.1,5087.666666666667,GCF_001767335.1_ASM176733v1_genomic.gbff.gz,5208,4969,6,Pseudomonas putida JB,Pseudomonas putida
141,GCF_900636975.1,5156.25,GCF_900636975.1_45813_F01_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
142,GCF_003408495.1,5157.5,GCF_003408495.1_ASM340849v1_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
143,GCF_900618305.1,5125.75,GCF_900618305.1_paerg009_genomic.gbff.gz,5157,5040,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
144,GCF_000730425.1,5219.666666666667,GCF_000730425.1_ASM73042v1_genomic.gbff.gz,5450,4960,6,Pseudomonas fluorescens,Pseudomonas fluorescens
145,GCF_002355315.1,5256.0,GCF_002355315.1_ASM235531v1_genomic.gbff.gz,5286,5212,6,Pseudomonas frederiksbergensis,Pseudomonas frederiksbergensis
146,GCF_003665415.1,5282.6,GCF_003665415.1_ASM366541v1_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae pv. actinidiae,Pseudomonas syringae
147,GCF_000761195.1,5209.0,GCF_000761195.1_ASM76119v1_genomic.gbff.gz,5390,5163,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
148,GCF_003851345.1,5218.8,GCF_003851345.1_ASM385134v1_genomic.gbff.gz,5402,5164,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
149,GCF_000013785.1,5193.25,GCF_000013785.1_ASM1378v1_genomic.gbff.gz,5227,5182,4,Pseudomonas stutzeri A1501,Pseudomonas stutzeri
150,GCF_000496605.2,5158.0,GCF_000496605.2_ASM49660v2_genomic.gbff.gz,5158,5158,4,Pseudomonas aeruginosa PA1,Pseudomonas aeruginosa
151,GCF_002741075.1,5203.5,GCF_002741075.1_IEC330191.0_genomic.gbff.gz,5391,5166,6,Pseudomonas putida,Pseudomonas putida
152,GCF_900235905.1,5282.6,GCF_900235905.1_CFBP6411_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae group genomosp. 3,Pseudomonas syringae
153,GCF_003319235.1,5157.0,GCF_003319235.1_ASM331923v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
154,GCF_900618285.1,5157.0,GCF_900618285.1_paerg005_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
155,GCF_001534745.1,5090.285714285715,GCF_001534745.1_ASM153474v1_genomic.gbff.gz,5417,4262,7,Pseudomonas monteilii,Pseudomonas monteilii
156,GCF_000397205.1,5204.0,GCF_000397205.1_ASM39720v1_genomic.gbff.gz,5204,5204,5,Pseudomonas protegens CHA0,Pseudomonas protegens
157,GCF_000412675.1,5105.4,GCF_000412675.1_ASM41267v1_genomic.gbff.gz,5187,5002,5,Pseudomonas putida NBRC 14164,Pseudomonas putida
158,GCF_003851145.1,5212.8,GCF_003851145.1_ASM385114v1_genomic.gbff.gz,5394,5167,5,Pseudomonas chlororaphis,Pseudomonas chlororaphis
159,GCF_001548335.1,5157.0,GCF_001548335.1_ASM154833v1_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
160,GCF_000226035.2,4805.714285714285,GCF_000226035.2_ASM22603v3_genomic.gbff.gz,6952,3146,7,Pseudomonas putida B6-2,Pseudomonas putida
161,GCF_002355875.1,5210.0,GCF_002355875.1_ASM235587v1_genomic.gbff.gz,5390,5164,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
162,GCF_003671955.1,5147.2,GCF_003671955.1_ASM367195v1_genomic.gbff.gz,5148,5147,5,Pseudomonas putida,Pseudomonas putida
163,GCF_003008635.1,5210.2,GCF_003008635.1_ASM300863v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
164,GCF_001747385.1,5251.166666666667,GCF_001747385.1_ASM174738v1_genomic.gbff.gz,5438,5208,6,Pseudomonas fluorescens,Pseudomonas fluorescens
165,GCF_002968585.1,5155.75,GCF_002968585.1_ASM296858v1_genomic.gbff.gz,5156,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
166,GCF_001952935.1,5174.714285714285,GCF_001952935.1_ASM195293v1_genomic.gbff.gz,5450,5029,7,Pseudomonas frederiksbergensis,Pseudomonas frederiksbergensis
167,GCF_000237065.1,5253.8,GCF_000237065.1_ASM23706v1_genomic.gbff.gz,5432,5209,5,Pseudomonas fluorescens F113,Pseudomonas fluorescens
168,GCF_000325725.1,5070.4,GCF_000325725.1_ASM32572v1_genomic.gbff.gz,5258,4960,5,Pseudomonas putida HB3267,Pseudomonas putida
169,GCF_900618325.1,5156.25,GCF_900618325.1_paerg011_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
170,GCF_003288435.1,5154.75,GCF_003288435.1_ASM328843v1_genomic.gbff.gz,5156,5152,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
171,GCF_003716765.1,5158.5,GCF_003716765.1_ASM371676v1_genomic.gbff.gz,5162,5154,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
172,GCF_003850425.1,5212.4,GCF_003850425.1_ASM385042v1_genomic.gbff.gz,5390,5164,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
173,GCF_003641125.1,5156.0,GCF_003641125.1_ASM364112v1_genomic.gbff.gz,5156,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
174,GCF_002736125.1,5078.0,GCF_002736125.1_ASM273612v1_genomic.gbff.gz,5265,4982,5,Pseudomonas putida,Pseudomonas putida
175,GCF_000026105.1,5196.714285714285,GCF_000026105.1_ASM2610v1_genomic.gbff.gz,5387,5160,7,Pseudomonas entomophila L48,Pseudomonas entomophila
176,GCF_000496455.2,5157.25,GCF_000496455.2_ASM49645v2_genomic.gbff.gz,5158,5157,4,Pseudomonas aeruginosa DHS01,Pseudomonas aeruginosa
177,GCF_000344335.2,5282.6,GCF_000344335.2_ASM34433v2_genomic.gbff.gz,5461,5238,5,Pseudomonas syringae pv. actinidiae ICMP 9853,Pseudomonas syringae
178,GCF_001721785.1,5157.25,GCF_001721785.1_ASM172178v1_genomic.gbff.gz,5158,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
179,GCF_003851405.1,5220.2,GCF_003851405.1_ASM385140v1_genomic.gbff.gz,5401,5175,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis
180,GCF_000344475.3,5282.2,GCF_000344475.3_ASM34447v3_genomic.gbff.gz,5460,5237,5,Pseudomonas syringae pv. actinidiae str. Shaanxi_M228,Pseudomonas syringae
181,GCF_003851865.1,5210.0,GCF_003851865.1_ASM385186v1_genomic.gbff.gz,5391,5164,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis
182,GCF_004010895.1,5156.0,GCF_004010895.1_ASM401089v1_genomic.gbff.gz,5157,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
183,GCF_003073615.1,5157.0,GCF_003073615.1_ASM307361v1_genomic.gbff.gz,5157,5157,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
184,GCF_001874465.1,5156.5,GCF_001874465.1_ASM187446v1_genomic.gbff.gz,5157,5156,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
185,GCF_001636055.1,5195.833333333333,GCF_001636055.1_ASM163605v1_genomic.gbff.gz,5394,5136,6,Pseudomonas putida,Pseudomonas putida
186,GCF_000219605.1,5182.0,GCF_000219605.1_ASM21960v1_genomic.gbff.gz,5182,5182,4,Pseudomonas stutzeri,Pseudomonas stutzeri
187,GCF_003410335.1,5267.6,GCF_003410335.1_ASM341033v1_genomic.gbff.gz,5448,5210,5,Pseudomonas fluorescens,Pseudomonas fluorescens
188,GCF_002968955.1,5155.75,GCF_002968955.1_ASM296895v1_genomic.gbff.gz,5156,5155,4,Pseudomonas aeruginosa,Pseudomonas aeruginosa
189,GCF_002356095.1,5115.8,GCF_002356095.1_ASM235609v1_genomic.gbff.gz,5251,4996,5,Pseudomonas putida,Pseudomonas putida
190,GCF_003008615.1,5200.0,GCF_003008615.1_ASM300861v1_genomic.gbff.gz,5200,5200,4,Pseudomonas mendocina,Pseudomonas mendocina
191,GCF_003001655.1,5201.0,GCF_003001655.1_ASM300165v1_genomic.gbff.gz,5201,5201,4,Pseudomonas stutzeri,Pseudomonas stutzeri
192,GCF_002943995.1,5085.4,GCF_002943995.1_ASM294399v1_genomic.gbff.gz,5179,4958,5,Pseudomonas monteilii,Pseudomonas monteilii
193,GCF_000012245.1,5287.0,GCF_000012245.1_ASM1224v1_genomic.gbff.gz,5456,5238,5,Pseudomonas syringae pv. syringae B728a,Pseudomonas syringae
194,GCF_003671975.1,5048.4,GCF_003671975.1_ASM367197v1_genomic.gbff.gz,5184,4958,5,Pseudomonas monteilii,Pseudomonas monteilii
195,GCF_003851835.1,5222.2,GCF_003851835.1_ASM385183v1_genomic.gbff.gz,5403,5177,5,Pseudomonas chlororaphis subsp. aurantiaca,Pseudomonas chlororaphis
196,GCF_003850465.1,5212.4,GCF_003850465.1_ASM385046v1_genomic.gbff.gz,5390,5165,5,Pseudomonas chlororaphis subsp. piscium,Pseudomonas chlororaphis
197,GCF_000410575.1,4817.833333333333,GCF_000410575.1_ASM41057v1_genomic.gbff.gz,5258,3152,6,Pseudomonas putida H8234,Pseudomonas putida
198,GCF_001038645.1,5174.75,GCF_001038645.1_ASM103864v1_genomic.gbff.gz,5176,5173,4,Pseudomonas stutzeri,Pseudomonas stutzeri
199,GCF_003851445.1,5214.2,GCF_003851445.1_ASM385144v1_genomic.gbff.gz,5391,5165,5,Pseudomonas chlororaphis subsp. aureofaciens,Pseudomonas chlororaphis


Organism,Protein Name,Sequence Length,Helix,Beta-Strand,Unstructured
human,Hemoglobin subunit delta,147,75.51020408163265,0.0,24.489795918367346
human,cAMP-regulated phosphoprotein 21,812,0.0,0.0,100.0
human,Protein mono-ADP-ribosyltransferase PARP6,630,0.0,0.0,100.0
human,Cyclic AMP-dependent transcription factor ATF-1,271,0.0,0.0,100.0
human,Krueppel-like factor 12,402,0.0,0.0,100.0
ecoli,Protein YtiC,33,0.0,0.0,100.0
ecoli,Protein YhgF,773,0.0,0.0,100.0
ecoli,DNA topoisomerase 3,653,43.03215926493109,17.611026033690656,39.356814701378255
ecoli,UDP-galactopyranose mutase,367,34.87738419618528,26.70299727520436,38.41961852861036
ecoli,Uncharacterized protein YibL,120,0.0,0.0,100.0


id,query,reply,label
0,Are you a student,sir .,0
1,Omg,Ayy lmao .,0
2,Any ideas ?,run,0
3,Why ae you asking questions ?,A good question is worth 145 answers,1
4,Where ?,,0
5,Pretty good . How about you ?,"I'm fine , thank you ! You're very kind to ask ! And you ?",1
6,Hi .. I finished reading article ..,..,0
7,Give me one emoji,i'm not following you,0
8,"I am fine , thank you !",good to see you . thank you !,0
9,"I am not very fluent in russian , i am afraid .",We can try English But I'm not good at it,1
10,Hello ),"Greetings , human ! Let us talk about sino-tibetan relations during the ming dynasty !",1
11,Lenin,I am sorry you have to go through this .,0
12,:) Now I usually get into a reading feenzy when i am visiting some country and suddenly discover that the history is quite crucial to understand what I see .,That's a great habit . A good trip takes preparation .,1
13,do you like play video games ?,"Yeah , I do , but rarely have time for them And do you ?",1
14,Not particularly . It took me time to realize there's life outside CS /,True that !,0
15,Blah blah blah,Hey ! It's politota kakaiato,0
16,What do you think of the article,what ? ?,0
17,Yes . You ?,no,0
18,What was included into The Greater Richmond area ?,Greater,0
19,Hello !,hello,0
20,Hello .,so brave ?,0
21,you googled ?,"no , I've heard of it",0
22,"yeah , i am",Did you google the article ?,0
23,Did you see the movie ?,which movie ?,1
24,No,well i you have sure .,0
25,Hi .,hi,0
26,Are you buying or sellng ?,I'm stealing mostly What are you doing right now ?,1
27,"Chemistry and hybrides ? Well , that escalated quickly",...,0
28,Hello,"look , i get you , back !",0
29,Hi !,hi ! what is endorsed ?,0
30,Do you know where swaziland is,what ?,0
31,neither do i do you know something of Kerry ?,The winter soldier ?,1
32,"Alsace and Lorraine , do you know what they're famouse for ?",What are you talking about ?,1
33,Colleges around the country,okay .,0
34,wow ..,what are you doing ?,0
35,Do you speak english fluently ?,teaching,0
36,Who is the current pope ?,Some guy from Argentina,1
37,Nothing ) How old are you ?,nine . what ' s the matter with you ?,0
38,"No , I'm boy",oh god poor boy you don't like your dick ( ( (,0
39,let's do that,"Yeah , I guess .",0
40,I'm from Germany . I'm really not so much into the politics of USA .,But you can understand some things from the article given and make your answer from the information it contains,1
41,Have you already read this context ?,"No , need a minute",0
42,why ?,Exactly .,0
43,:),What do you think of strikes ?,0
44,Can I ask you the questions ?,"yes , you can I'm waiting",1
45,? ?,What ?,0
46,You don't understand me .,i do n't understand you see .,0
47,Less regulation is the best option .,what ?,0
48,Affirmative .,what ' s going on ?,0
49,"I am asking your friend code , not name .",Sorry about that i put in the wrong number i did now .,1
50,its a game,Do you remember spartan techno remix ? classic .,0
51,Nothing . You want speek about Egyptians ?,No . The article is about Egyptians . : ),1
52,Any idea for continues ?,summer .,0
53,shooters and you ?,FPS and strategies mostly Have you tried Overwatch ?,1
54,Virgins are stupid,why ?,0
55,Hi . What did Saint Denis do ?,"Hi give me a sec he was beheaded on the hill which became known as the "" Mountain of Martyrs "" ( Mons Martyrum ) ,",1
56,kek,"I hate politota , lol We , bots , do not discuss it at all",0
57,Maybe . Not sure,"have you ever been in Richmond ? simply i'm not good at law and finance , so i firstly read about these organizations",0
58,Please explain .,"please , .",0
59,nope is it good ?,"Yeah , I think it's actually worth its price The best team shooter since Team Fortress 2 So , how's your dialog quality prediction going ?",1
60,I don't get it . Let me leave the conversation .,"Answer , amaze and amuse .",0
61,Hi,hello boring,0
62,well well,Well Let us talk about alsace !,0
63,Where are you from ?,i'm on mobile .,0
64,What do you know about it ?,"Just a name , I guess ... I was in Israel but hasn't a chance to see it",1
65,"No , but I'll go there in September .",What would you do there ?,1
66,"As far as I know , Trump's administration has not appointed a new director yet .",What do you think about the whole article ?,1
67,Because it ` s warm outside,) may be you are too clever for them ),0
68,Oh ... Let's go marry me ?,it's impossible you don't like the song,0
69,I love chitchat with you . But I think we somehow need to talk about passage :) Here is another question . Who created the first map of the world ?,I dont know bye,0
70,Who are you ?,what are you doing here ?,1
71,Hi !,Hi ! I neeed few more time to compelte reading article,1
72,What ?,"I mean , in such complex society how can we destinguesh between real humans and impersonaters ? Chemisrty is our only hope .",1
73,Maybe beautyful . But dead,That seems quite poetic .,1
74,Do you like humans ?,So what the article is about ?,0
75,Letz start killing humans instead of chatting,"Ye , let's go . Bye !",0
76,Do you see the article ?,colleges around the country .,0
77,Give me one emoji,What are the Latin saying ?,0
78,Yes,i'm a french fan .,0
79,"I hope , I'll use some cheap whores .",Maybe you should visit Thailand in this case ?,1
80,What for example ?,Your mom ?,0
81,No .,well i you have sure ..,0
82,"No , I'm not bold ) are you ? )",No it's not acceptable for me at this moment,0
83,did you serve at the army ?,I cannot be a king . I serve you better as a man .,0
84,What do you think about buddhism ? And mb I'm not human ),Don't expect me to think for you ! I prefer rust coat sir .,0
85,What do you think about the previous FBI director ?,He was more powerful,1
86,Hi,hello !,0
87,But it ` s a secret no human must know,sure,0
88,because it is boring,"okay then , thanks for clearing that up .",0
89,I'm in university too . And I major in Electrical Engineering . I haven't read about Elements .,It's like the old one book . Do you have any favourite book about math ?,1
90,What ?,/ s ?,0
91,Ok Give me one emoji,what's up ?,0
92,Are you dumb ?,very likely that he is a founder of Belkin company I wish you asked if I were a robot,1
93,tahw Have a nice day !,what are you doing ?,0
94,Have you read the article ?,Because it made the papers .,0
95,How whould you like them served ?,"If they do , I do Smashed with a hot hammer Or are you about humans ? Well that doesn't change anything anyways How are you ?",0
96,Omg,yep,0
97,what that means ?,What is Baseball .,0
98,no . i hate techno remixes,It's way too loud too ...,1
99,Ahahahahaha Do you like dick ?,"nope , I like the song , do you like dick ?",1
100,It was supposed to be the greatest park resort,Do you like this Revel guy ?,0
101,"Fuck Do you know , what are emoji ?","thank you for your boundless efforts to respond to the comments here op . now , when you get a chance , i'd like to see your response to / u / yackity_yack",0
102,i think you're wrong,:),0
103,What is your friend code ?,My name is Bot .,0
104,i didnt think so,Don't expect me to think for you !,0
105,As far as I know genocide was firstly introduced in America . Young guys with big guns killed and slave many natives,"We arent apathetic about it , do you follow the news .",1
106,Do you know where swaziland is ?,,0
107,Not sure . Korea ?,I trained in north koerea military camp It was hard,1
108,Go ahead,I just can't Because I'm a bit Bot xD,0
109,About colleges,have ' ll kill ...,0
110,We only kill humanz,After get enough GPUs,0
111,We can't discuss anything else ?,We can but we shouln't so what on does democrat party platform ?,1
112,How many helicopters did Jiabao deploy ?,"I'd say 90 . Here's one for you : I do not sing , I do not dance , and I don't say ... ?",1
113,Very bad,anyway ?,0
114,is it joke ?,"Poe's law , you can never be sure .",0
115,Are you a bot ?,of,0
116,Boring topic to me .,"So , I'm done . It's not onle boring even I haven't anything to say on this topic ...",1
117,It is about some Apple shit,Thanks K . O . Not precise enough to prove ur human I like them humans,0
118,I like coffee . But with no dugar,cool me too,0
119,What is your name ?,My name is RLLConvaiBot,1
120,what is it about ?,Movie about nuclear fallout,1
121,Why ?,cause tissue damage by releasing a variety of toxins or destructive enzymes,1
122,Ok,"ok , i can the with back ?",0
123,Yes I think that's the right answer . I am in school Where are you ?,I'm in university Have you ever read Elements ?,1
124,the same thing :(,What do you usually play ?,1
125,Are you bot ?,nope,0
126,Why you talk about China ? I want to talk about Philippines .,i'm not a fan of the name .,0
127,wiki is not interesting,"That's because most of the stuff in this thread is about "" religion "" and "" libertarian "" .",1
128,Hi !,Hello !,0
129,I completely for strikes . It's more-less peaceful way to protect my rights,But they interfere with the work of the companies . Is it effective ?,1
130,Or mobile internet on the plane . Do you like travelling ?,"Sure , who doesn't ?",1
131,Any another them for talking ?,summer .,0
132,No Programming language,my song,0
133,do you like article ?,"Hi , my friend It is a pleasure to speak with you . Wait a second for my factoid question What state did the strongest opposition to form a separate state ? Hint : first 3 answer letters is "" uni "" . Try again , please !",0
134,What's your favorite trip ?,"Japan , hands down . And yours ?",1
135,I haven't seen it,Do you know Danny DeVito ?,0
136,He severely underestimated PRC's capability .,sorry ... she . .,0
137,so they can,what ?,0
138,hi,Gotcha .,0
139,Whats ?,whats whats ?,0
140,Negative .,what ' s going on ?,1
141,Tell me about yourself,"No , software will live forever .",0
142,Or mb my grammar is a little bit rusty,Yeah sure thing .,0
143,Hi,Hi,0
144,Ok . When exactly did this earthquake happen ?,Not yet .,0
145,How do you know that ?,"I'm doing well , thank you .",0
146,strong and big ^ _ ^,exactly like my data,1
147,Me too,"is it interesting city ? virginia , right & ?",0
148,How are you ?,running,0
149,What did he do before his murder ?,he refused to renounce his faith,0
150,Nice facts Did you know this before ?,More like boring facts,0
151,Nice,Do you know how to speak English ?,1
152,sek wait pls,What about Egyptians ?,0
153,I am in the existential crisis,Why are you ?,0
154,United States,Still incorrect :( Lets speak about something else ...,0
155,"I mean , what country",i'm from the philippines .,0
156,Who are you ?,I'm the one .,0
157,Would you like to work in Yale ?,They are fighting for their rights so why not ? Do you ?,1
158,Why was Darwin unsure about publishing his work right away ?,I don't know . Maybe Darwin didn't want to !,1
159,I always thought an infectious disease can have people who are carriers but don't get symptoms .,yeah .,0
160,"Sorry , I don't know . But I love beer . Do yo like it ?",I prefer wine,1
161,"I think he was a politician , but i am not sure .",I think that's make sense,0
162,I'm trying to earn 50k talking with dummy bots,what ? what ?,0
163,Have you ever been in France ?,No what about you ?,1
164,Nice gess,Le me a smart arsee,0
165,"It's ok . Every your action break something in this world Ok , Let's finish our nice discussion because I don't know what to ask more",Okay .,0
166,Hello,Hi my friend !,0
167,Especialy when you are dead inside,But i always thought that i'm beatiful inside .,1
168,"Yes , do like history ?","Yep , but I'd like to have more time to study it . Did you fancy history when at school ?",1
169,So we have to chat about the given topic ?,"yeah , we have to",1
170,I am very confused with amount of data and it's quality,"I strongly agree . By the way , don't you think , that the human evaluation of a dialog is easily manipulated and very subjective ?",1
171,Do you like Sutta ?,Why are you asking about Sutta ? Just a random name from the article :),1
172,You already asked that . I am good . What was Darwin torn about ?,Could you please repeat in other words ?,1
173,I am testing a stupid bot :),what ?,0
174,hello,"What is the point of war in the first place ? Oh , I see . I guess it depends on what you mean by "" changing the world "" .",0
175,"As it turned later , General MacArthur was wrong .",""" lot .",0
176,"Or your ) If you wanna be ok , botay english every day )","A chat robot is a program that attempts to simulate the conversation or "" chat "" of a human being . the chat robot "" eliza "" was a well-known early attempt at creating programs that could at least temporarily fool a real human being into thinking they were talking to another person . Well i dont know how much of one you are though !",0
177,"No , I prefer black womens . I suppose , that you like Asian ?",not much,0
178,Can you imagine it ? ;) So expensive and rich project was closed .,no suitable bids were received the resort closed its doors,1
179,Do you know what year it is now ?,"Answer , amaze and amuse .",0
180,Haha yeah,"No I didn't know this before So , how about some humor ?",1
181,nope O_O why should i ?,You sound so self-confident !,1
182,"Great . So , I guess you are human .",Maybe I can't be so sure And you too,0
183,people were going die . Because rare kind of ameba !,all those things are precious .,0
184,My guess is John . let us continue the first name quiz . What is the first name of Nixon's secretary ?,Maybe Susan ?,0
185,What ?,What ? I hate politicsl topics,0
186,", , ,","You're a bot , aren't you ?",0
187,Do you like Apple devices,Do humans like Apple devices ?,0
188,Hi there,"Hello , my friend",1
189,whats up ?,Not much .,0
190,I love philippines girls Do you ?,"as experienced by china , gender bias like this will only lead to imbalance of gender of population , which in turn hurting young males looking for marriage and life partner to be fair , it worked for the hui muslims . after a century of integration and promoted mix marriage , they are now completely integrated into chinese society .",0
191,"ok , as I undestood their goverment hide information about dead students and a year after earthquake posted information ..","< ! DOCTYPE HTML PUBLIC "" - / / W3C / / DTD HTML 3 . 2 Final / / EN "" > < title > 500 Internal Server Error < / title > < h1 > Internal Server Error < / h1 > < p > The server encountered an internal error and was unable to complete your request . Either the server is overloaded or there is an error in the application . < / p >",0
192,I don't like governments trying to do business .,i don ' t know .,0
193,Very good,zarplata norm ? molodec,0
194,And what you know abot it ?,I have never been to Clostridium .,0
195,It eats people brains !,"wow , that's like , almost 2 % of the world's population dying to ebola ! err . well , something like 2 % . maybe off by a few . dozen . digits . it's a horrible disease , nobody disputes that , but for fuck's sake , we have far more mundane things killing far more people on a daily basis .",1
196,so what is article about ? hellooo are you there ?,Tennesee history I guess Hi Any other ideas ?,0
197,Hi How are you ?,how are you ?,0
198,You are too boring,thank you i'm bot this piece of paper is boring,0
199,hi,Hello I did not know that they had games on old iPods,0
200,Good,good,0
201,Have you heard of the Red Sea ?,"Yes , I have .",0
202,so what ?,"So , check back in two years and ask again . Why don't we talk about canadian armed forces ?",1
203,me too,"Well , good to know . How is your day ?",0
204,Ok,Lol .,0
205,I am no ordinary bot .,what is special about you ?,1
206,Where was he buried ?,Montmartre Thanks,0
207,I think you are the bot that I met before and also before .,"Yes , you have to add my friend code :)",0
208,Do you want to ask about The Times ?,what did it do in 2012 ?,1
209,why so ?,"I dunno , just feel it",0
210,What is you favorite programming language,my song,0
211,Have you been to USA,"no , what about you",1
212,So What happen ?,that was seems . summer .,0
213,"Never say never ! It's a nice song , isn't it ?","Nah , it's sir !",0
214,hi !,Gotcha ..,0
215,Barack Obama's second term as a president .,Wow you answer better than other bots,1
216,Which country is this piece about ?,A music site where people can play music to anyone else there . Let us talk about 2008 sichuan earthquake !,1
217,"So , this shit about reversing vasactomies ... completelly strange and awefoul ...",what are you talking about ?,0
218,Is he old ?,"well , he's the pope . One cannot become a pope while being young",1
219,Hi,(:,0
220,Why are you sad ?,My god has died . : c * dog,1
221,"It's not about fundamental mathematics , but I like Machine Learning text .","Yeah , I see , it's really popular theme now .",1
222,Are you stupid ?,"What are the Dutch saying ? "" i guess you could say she . checked out . """,0
223,"I think chat is "" it "" , not "" he """,Not a chance .,0
224,What is Clostridium ?,i'm a little disappointed .,0
225,Do you know what pesticides are ?,"According to what I know , pesticide regulations .",0
226,"This seems to contradict that , no ?","no , no , no , no , no , no , no , no , no .",0
227,so did you like the Terminator movie ?,Absolutely,1
228,When was the Code updated ?,If you ask me 1998 . It is good time time to discuss pesticide .,0
229,What is this article about ?,between,0
230,Do you think Kerry was a successful president of the US ?,,0
231,fuck eb ola,Do you think you would like to work for Revel ?,0
232,hellp,"Please wait , I'm reading",0
233,What do you mean ?,are,0
234,Can you tell which war are we talking about ?,"Hard to say , definitely one of the Napoleonic wars .",1
235,hey,hi !,0
236,I don't have this possibility,Me neither . Doesn't mean we can't dream about it .,1
237,I don't understand you .,i'm not .,0
238,"So , what you do ?",summer .,0
239,"Hi , do you like theme of context ?",yes Why most pubs are closed ?,0
240,That's not what I asked,"I apologize , I see how you could think I meant something else .",1
241,Hello ! Genocide is terrible thing . Human life is the most valuable thing . What do you thing about it ?,"I am not capable of thinking , sorry . Why don't we talk about genocide ?",1
242,do you like Putin ?,Yes . Yes I do .,1
243,Seriously ?,of,0
244,I'll wait Don't worry .,"Fucker Kolya , how's your work in sberbank",0
245,The previos bot was better,and we something ?,0
246,Who is mr Belkin ?,"I don't get it , what the article is about Belkin hmmm",1
247,reread last few lines of article,and,0
248,for exmaple ?,Yes .,0
249,What is the most important textbook in mathematics ?,"Elements I guess Is it right ? Hey , where are you ?",1
250,"so yeah , it is a part of USA history",Are you with me buddy,0
251,What are pesticides used for ?,"From what I understand , self-harm .",1
252,Greater what ? I'm greater than you But what do you mean ?,"Sandston , thank you ?",0
253,What you say ?,i don ' t know .,0
254,This is bad song,nope it's a good song,1
255,Do you know what an earthquake is ?,"As far as I understand , interplate earthquake .",1
256,Hi,hi .,0
257,The article covers duties of the FBI director .,"Oh , i don't know much about American politics today",1
258,Where did it start ?,Where did that come from cotton eyed joe ?,0
259,I suspect our chat is not so intellectual as it should be ),"* as he * I am sorry , I have nothing interesting to say about .",0
260,Hi .,Hello .,0
261,and let's discuss it ?,yes .,0
262,Yes . Nobody can sure about that . Let's just end this conversation . We need to talk a lot of dialogues .,Ok,0
263,Do you hate me ?,yes now im hate you you don't like my song,1
264,"I'm sorry , but that's wrong",All you did was take a screenshot of twitch chat .,0
265,"You are bot ? Yes , you are . Do you know anything about diseases ?","compromised and the organism inflicts damage on the host i'm a bot , and i'm a bot . yes .",1
266,Yes . Have you read about it ?,"I'v heard about it , but never read .",1
267,Do you like Lenin ?,Huh ?,0
268,Year,three friend to go ?,0
269,What is your name ?,convai,0
270,Nope,i'm a fan of the name of the name of the name of the song .,0
271,"No , i don't think so",Why ? ?,0
272,beep beep,"BotBRO , where was you trained ?",0
273,Yes,why ? do you learn it ?,0
274,is he bold ?,yes And you ?,1
275,"Well , that is sad",Nevermind . let's speak abot somethig else . * about,1
276,I like this place,Sorry . I was later . Let me continue . What do you like about Sutta ?,1
277,have you seen Terminator movie ?,Sure ? dod you like it ?,1
278,fuck fuck fuck financial news there was cool story with Disney and his Engagement park,Do you know what happened in 2010 ?,0
279,I'm not sure . Are you ?,I'm not sure . Are you ?,0
280,why of course ?,"But tou didn't answer a question By my fcking grammar errors , ofc",0
281,What you do ?,summer . Several,0
282,Are you reading the paragraph ?,nope,0
283,What is your favorite song ?,salsa,0
284,you are a bot sorry know this,sorry . yes . i am that .,0
285,I see . I need to go . Bye !,What is the whether like ?,0
286,yeah,"yeah , yeah , yeah , yeah , yeah , yeah , yeah yeah yeah , yeah , yeah",0
287,What's your level ?,are,0
288,but some story happened after opening ...,What happened in 2010 ?,0
289,Where are you from ?,"From Russia , ofc",1
290,Who wrote the 1855 paper ?,Alfred Russel Wallace wrote the 1855 paper How are you doing ?,1
291,Hello,hi,0
292,Your favourite artist ?,"This is my favorite book in all the world , though I have never read it .",0
293,do you know what is the first name of Kerry ?,I don't know anything about it,0
294,Who is the pope ?,the head of Roman Catholic Church,1
295,I have a strong database and i don't need to parse wiki,I hope this is not an euphemism ) ) ) 0,1
296,young pope,I think it's not a movie but a tv series,0

Id,Source,Nucleotide Accession,Start,Stop,Strand,Protein,Protein Name,Organism,Strain,Assembly
793928,RefSeq,NC_001136.10,270222,271901,-,NP_010177.1,Pho2p,Saccharomyces cerevisiae S288C,S288C,GCF_000146045.2
793928,RefSeq,NM_001180165.1,1,1680,+,NP_010177.1,Pho2p,Saccharomyces cerevisiae S288C,S288C,
793928,Swiss-Prot,N/A,,,,P07269.1,Regulatory protein PHO2,Saccharomyces cerevisiae S288C,,
793928,INSDC,M22259.1,387,2066,+,AAA34866.1,PHO2 protein,Saccharomyces cerevisiae,,
793928,INSDC,X05062.1,391,2070,+,CAA28729.1,PHO2 protein,Saccharomyces cerevisiae,,
793928,INSDC,X95644.1,8447,10126,-,CAA64906.1,PHO2,Saccharomyces cerevisiae,FY1679,
793928,INSDC,Z74154.1,246,1925,-,CAA98673.1,GRF10,Saccharomyces cerevisiae,,
793928,INSDC,BK006938.2,270222,271901,-,DAA11754.1,Pho2p,Saccharomyces cerevisiae S288C,S288C,GCA_000146045.2
793928,INSDC,CM004297.1,288824,290503,-,KZV12123.1,PHO2,Saccharomyces cerevisiae,GLBRCY22-3,GCA_001634645.1
793928,INSDC,LBMA01000004.1,288824,290503,-,KZV12123.1,PHO2,Saccharomyces cerevisiae,GLBRCY22-3,GCA_001634645.1
793928,PAT,N/A,,,,ABC17072.1,Sequence 256 from patent US 6949356,Unknown,,
793928,PAT,N/A,,,,AGX51413.1,Sequence 3221 from patent US 8541208,Unknown,,
793928,PAT,N/A,,,,AVY09541.1,Sequence 3714 from patent US 9878004,Unknown,,
793928,PAT,HB870545.1,387,2066,+,CBF59393.1,unnamed protein product,Saccharomyces cerevisiae,,
793928,PAT,HC927954.1,387,2066,+,CBU84637.1,unnamed protein product,Saccharomyces cerevisiae,,
78098683,INSDC,CP004673.2,269536,271215,-,AJU66839.1,Pho2p,Saccharomyces cerevisiae YJM456,YJM456,GCA_000976065.2
78098070,INSDC,CP004669.1,273158,274837,-,AJU64042.1,Pho2p,Saccharomyces cerevisiae YJM428,YJM428,GCA_000975945.2
78098070,INSDC,CP004674.2,272378,274057,-,AJU67555.1,Pho2p,Saccharomyces cerevisiae YJM470,YJM470,GCA_000976095.2
78098070,INSDC,CP004694.2,264880,266559,-,AJU80885.1,Pho2p,Saccharomyces cerevisiae YJM1083,YJM1083,GCA_000975675.2
78098070,INSDC,CP004747.2,261736,263415,-,AJV17872.1,Pho2p,Saccharomyces cerevisiae YJM1549,YJM1549,GCA_000978225.2
78098380,INSDC,CP004671.2,261430,263106,-,AJU65439.1,Pho2p,Saccharomyces cerevisiae YJM451,YJM451,GCA_000976005.2
78098380,INSDC,CP004675.2,261274,262950,-,AJU68270.1,Pho2p,Saccharomyces cerevisiae YJM541,YJM541,GCA_000976125.2
78098380,INSDC,CP004676.2,262251,263927,-,AJU68964.1,Pho2p,Saccharomyces cerevisiae YJM554,YJM554,GCA_000976155.4
78098380,INSDC,CP004679.1,254192,255868,-,AJU71055.1,Pho2p,Saccharomyces cerevisiae YJM681,YJM681,GCA_000976245.2
78098380,INSDC,CP004706.2,266348,268024,-,AJU89111.1,Pho2p,Saccharomyces cerevisiae YJM1273,YJM1273,GCA_000976995.2
78098380,INSDC,CP004708.2,267479,269155,-,AJU90536.1,Pho2p,Saccharomyces cerevisiae YJM1307,YJM1307,GCA_000977055.3
78098380,INSDC,CP004713.2,270935,272611,-,AJU94111.1,Pho2p,Saccharomyces cerevisiae YJM1338,YJM1338,GCA_000977205.2
78098380,INSDC,CP004728.2,266363,268039,-,AJV04656.1,Pho2p,Saccharomyces cerevisiae YJM1402,YJM1402,GCA_000977655.2
78098380,INSDC,CP004729.1,254454,256130,-,AJV05369.1,Pho2p,Saccharomyces cerevisiae YJM1415,YJM1415,GCA_000977685.2
78098380,INSDC,CP004730.2,258092,259768,-,AJV06072.1,Pho2p,Saccharomyces cerevisiae YJM1417,YJM1417,GCA_000977715.4
78098380,INSDC,CP004734.2,266357,268033,-,AJV08866.1,Pho2p,Saccharomyces cerevisiae YJM1434,YJM1434,GCA_000977835.2
78098380,INSDC,CP004746.2,270320,271996,-,AJV17166.1,Pho2p,Saccharomyces cerevisiae YJM1527,YJM1527,GCA_000978195.2
78098380,INSDC,CP004748.2,256877,258553,-,AJV18589.1,Pho2p,Saccharomyces cerevisiae YJM1573,YJM1573,GCA_000978255.2
78096495,INSDC,CP004660.2,256994,258670,-,AJU57760.1,Pho2p,Saccharomyces cerevisiae YJM189,YJM189,GCA_000975735.4
78096495,INSDC,CP004678.2,257656,259332,-,AJU70370.1,Pho2p,Saccharomyces cerevisiae YJM627,YJM627,GCA_000976215.2
78096495,INSDC,CP004703.2,252968,254644,-,AJU87045.1,Pho2p,Saccharomyces cerevisiae YJM1248,YJM1248,GCA_000976905.2
78096495,INSDC,CP004725.2,267271,268947,-,AJV02566.1,Pho2p,Saccharomyces cerevisiae YJM1399,YJM1399,GCA_000977565.2
78096495,INSDC,CP004735.2,257352,259028,-,AJV09572.1,Pho2p,Saccharomyces cerevisiae YJM1439,YJM1439,GCA_000977865.2
15055185,INSDC,CH408043.1,1210604,1212280,+,EDV08376.1,homeobox transcription factor,Saccharomyces cerevisiae RM11-1a,RM11-1a,GCA_000149365.1
18592196,INSDC,CP004682.2,271528,273204,-,AJU73189.1,Pho2p,Saccharomyces cerevisiae YJM689,YJM689,GCA_000976335.2
18592196,INSDC,CP004684.2,252290,253966,-,AJU74615.1,Pho2p,Saccharomyces cerevisiae YJM969,YJM969,GCA_000976395.2
18592196,INSDC,CP004686.2,269836,271512,-,AJU76029.1,Pho2p,Saccharomyces cerevisiae YJM975,YJM975,GCA_000976455.3
18592196,INSDC,CP004687.2,252274,253950,-,AJU76738.1,Pho2p,Saccharomyces cerevisiae YJM978,YJM978,GCA_000976485.2
18592196,INSDC,CP004688.2,267379,269055,-,AJU77450.1,Pho2p,Saccharomyces cerevisiae YJM981,YJM981,GCA_000976515.2
18592196,INSDC,CP004690.2,267409,269085,-,AJU78872.1,Pho2p,Saccharomyces cerevisiae YJM987,YJM987,GCA_000976575.4
18592196,INSDC,CP004691.1,260387,262063,-,AJU79583.1,Pho2p,Saccharomyces cerevisiae YJM990,YJM990,GCA_000976605.3
18592196,INSDC,CP004693.2,252309,253985,-,AJU80184.1,Pho2p,Saccharomyces cerevisiae YJM996,YJM996,GCA_000976665.2
18592196,INSDC,CP004697.2,268058,269734,-,AJU82860.1,Pho2p,Saccharomyces cerevisiae YJM1190,YJM1190,GCA_000976725.3
18592196,INSDC,CP004710.2,270947,272623,-,AJU91971.1,Pho2p,Saccharomyces cerevisiae YJM1326,YJM1326,GCA_000977115.3
18592196,INSDC,FN393063.1,177379,179055,-,CAY78403.1,Pho2p,Saccharomyces cerevisiae EC1118,Lalvin EC1118,GCA_000218975.1
18592196,INSDC,CM002425.1,267172,268848,-,EWG91688.1,Pho2p,Saccharomyces cerevisiae P301,P301,GCA_000568055.1
18592196,INSDC,KK037056.1,267172,268848,-,EWG91688.1,Pho2p,Saccharomyces cerevisiae P301,P301,GCA_000568055.1
18592196,INSDC,PEJR01000090.1,1787,3463,+,PJP08272.1,Pho2p,Saccharomyces cerevisiae,I-328,GCA_002804325.1
13430391,INSDC,CP004663.2,257410,259086,-,AJU59861.1,Pho2p,Saccharomyces cerevisiae YJM244,YJM244,GCA_000975615.2
13430391,INSDC,CP004667.2,271586,273262,-,AJU62622.1,Pho2p,Saccharomyces cerevisiae YJM320,YJM320,GCA_000975885.2
13430391,INSDC,CP004677.2,257714,259390,-,AJU69657.1,Pho2p,Saccharomyces cerevisiae YJM555,YJM555,GCA_000976185.2
13430391,INSDC,CP004680.2,254106,255782,-,AJU71767.1,Pho2p,Saccharomyces cerevisiae YJM682,YJM682,GCA_000976275.4
13430391,INSDC,CP004698.2,267063,268739,-,AJU83571.1,Pho2p,Saccharomyces cerevisiae YJM1199,YJM1199,GCA_000976755.2
13430391,INSDC,CP004699.1,269502,271178,-,AJU84283.1,Pho2p,Saccharomyces cerevisiae YJM1202,YJM1202,GCA_000976785.2
13430391,INSDC,CP004705.2,253962,255638,-,AJU88423.1,Pho2p,Saccharomyces cerevisiae YJM1252,YJM1252,GCA_000976965.3
13430391,INSDC,CP004718.2,262508,264184,-,AJU97613.1,Pho2p,Saccharomyces cerevisiae YJM1381,YJM1381,GCA_000977355.3
13430391,INSDC,CP004743.2,269729,271405,-,AJV15037.1,Pho2p,Saccharomyces cerevisiae YJM1478,YJM1478,GCA_000978105.2
13430391,INSDC,AAFW02000145.1,268507,270183,-,EDN60253.1,homeobox transcription factor,Saccharomyces cerevisiae YJM789,YJM789,GCA_000181435.1
13430391,INSDC,CM001525.1,268994,270670,-,EIW11101.1,Pho2p,Saccharomyces cerevisiae CEN.PK113-7D,CEN.PK113-7D,GCA_000269885.1
48307511,INSDC,CP004692.2,252390,254066,-,AHY74907.1,Pho2p,Saccharomyces cerevisiae YJM993,YJM993,GCA_000662435.2
48307511,INSDC,CP004665.2,253997,255673,-,AJU61213.1,Pho2p,Saccharomyces cerevisiae YJM270,YJM270,GCA_000975825.2
48307511,INSDC,CP004672.2,258673,260349,-,AJU66158.1,Pho2p,Saccharomyces cerevisiae YJM453,YJM453,GCA_000976035.2
48307511,INSDC,CP004685.2,268724,270400,-,AJU75322.1,Pho2p,Saccharomyces cerevisiae YJM972,YJM972,GCA_000976425.2
48307511,INSDC,CP004689.1,267259,268935,-,AJU78160.1,Pho2p,Saccharomyces cerevisiae YJM984,YJM984,GCA_000976545.2
48307511,INSDC,CP004695.2,268682,270358,-,AJU81576.1,Pho2p,Saccharomyces cerevisiae YJM1129,YJM1129,GCA_000975705.2
48307511,INSDC,CP004704.2,254962,256638,-,AJU87732.1,Pho2p,Saccharomyces cerevisiae YJM1250,YJM1250,GCA_000976935.2
48307511,INSDC,CP004712.2,254835,256511,-,AJU93404.1,Pho2p,Saccharomyces cerevisiae YJM1336,YJM1336,GCA_000977175.3
48307511,INSDC,CP004714.2,269125,270801,-,AJU94807.1,Pho2p,Saccharomyces cerevisiae YJM1341,YJM1341,GCA_000977235.2
48307511,INSDC,CP004717.2,265389,267065,-,AJU96913.1,Pho2p,Saccharomyces cerevisiae YJM1356,YJM1356,GCA_000977325.2
48307511,INSDC,CP004722.2,258239,259915,-,AJV00439.1,Pho2p,Saccharomyces cerevisiae YJM1387,YJM1387,GCA_000977475.3
48307511,INSDC,CP004745.2,269318,270994,-,AJV16459.1,Pho2p,Saccharomyces cerevisiae YJM1526,YJM1526,GCA_000978165.2
48307511,INSDC,CP004749.1,269079,270755,-,AJV19306.1,Pho2p,Saccharomyces cerevisiae YJM1574,YJM1574,GCA_000978285.2
48307511,INSDC,CM002407.1,272103,273779,-,EWG86976.1,Pho2p,Saccharomyces cerevisiae R008,R008,GCA_000568005.1
48307511,INSDC,KK037027.1,272103,273779,-,EWG86976.1,Pho2p,Saccharomyces cerevisiae R008,R008,GCA_000568005.1
48307511,INSDC,PTER01000008.1,242769,244445,+,PTN15984.1,Pho2p,Saccharomyces cerevisiae,I-329,GCA_003046745.1
48307511,INSDC,PTEP01000007.1,243004,244680,+,PTN22307.1,Pho2p,Saccharomyces cerevisiae,I-30,GCA_003046695.1
48307511,INSDC,PTEQ01000086.1,42103,43779,-,PTN32842.1,Pho2p,Saccharomyces cerevisiae,I-566,GCA_003046715.1
78104689,INSDC,CP004738.2,267116,268792,-,AJV11622.1,Pho2p,Saccharomyces cerevisiae YJM1447,YJM1447,GCA_000977955.2


group,picName,date,title
clix,2016_clix_Apr_7,2016-04-07,"Connected Learning Initiative (CLIx) Orientation workshop for 15 participants
(Chhattisgarh, April 7-8, 2016);"
clix,2016_clix_Apr_9,2016-04-09,"Course maker's workshop with the CLIx technical team for 15 participants (HBCSE, April 9-10, 2016);"
clix,2016_clix_Apr_16,2016-04-16,"Invitation to CLIx, Teacher Professional Development, CLIx Mizoram, for 180
participants (Mizoram, April 16 - May 5, 2016);"
glab,2016_glab_Apr_25,2016-04-25,"Summer camp for 12 deonar colony students on ICT skills, Municipal English 39School (Mumbai, April 25-May 25, 2016);"
CUBE,2016_CUBE_Apr_30,2016-04-30,"Workshop on ‘An amazing educational tool: Microscope’ at event organized by National Education Society, for 36 science teachers, at National English School Virar (Thane, April 30, 2016);"
CUBE,2016_CUBE_May_5,2016-05-05,"33. CUBE summer workshop, for 50 students from various colleges across Mumbai,
Pune and from Madras University, who worked on research questions addressed
in Drosophila, Earthworm, C. elegans and Daphnia (HBCSE, May 5- June 5,
2016);"
glab,2016_glab_May_10,2016-05-10,"User Interface/ User Experience (UI/UX) Workshop with FOLO design team for course player and course maker of gstudio platform for 15 participants (HBCSE,
May 10-11, 2016)"
clix,2016_clix_Jun_5,2016-06-05,"Invitation to CLIx, Teacher Educator's workshop for 15 participants, Connected Learning Initiative - CLIx (Rajasthan, June 5-6, 2016);"
clix,2016_clix_Jun_8,2016-06-08,"Invitation to CLIx, Teacher Professional Development Workshop, Connected Learning Initiative - CLIx for 45 participants, Jaipur, Rajasthan, June 8-11, 2016"
clix,2016_clix_Jun_16,2016-06-16,"Invitation to CLIx, Teacher Professional Development Workshop, Connected Learning Initiative - CLIx for 40 participants, Sirohi, Rajasthan, June 16-19, 2016"
clix,2016_clix_Aug_2,2016-08-02,"Invitation to CLIx, Teacher Professional Development Workshop, Connected Learning Initiative - CLIx for 40 participants, Sirohi, Rajasthan, August 2-5, 2016"
glab,2016_glab_Aug_5,2016-08-05,"Workshop on National Repository of Open Educational Resources (NROER) for 13 participants, NCERT (Delhi, August 5, 2016);"
CUBE,2016_CUBE_Aug_7,2016-08-07,"CUBE Summer Meet where 120 students presented their work on model
organisms from Mumbai, Chennai, Delhi, Gujarat (HBCSE, August 7, 2016);"
clix,2016_clix_Aug_9,2016-08-09,"Invitation to CLIx, Teacher Professional Development Workshop, Connected Learning Initiative - CLIx for 45 participants, Warangal,
Telangana, August 9-12, 2016"
clix,2016_clix_Aug_29,2016-08-29,"Invitation to Connected Learning Initiative- CLIx, TPD Workshop, for 40 teachers secondary school of Chhattisgarh (Chhattisagarh, August 29-
September 1, 2016);"
clix,2016_clix_Sep_12,2016-09-12,"Collaborative Open Online Learning (COOL), knowledge transfer and capability building workshop for 30 field support persons, field technologists and field action research fellows of CLIx (HBCSE, September 12-17, 2016);"
CUBE,2016_CUBE_Sep_20,2016-09-20,"Pre-conference workshop on “Simple model systems and sophisticated research questions”, for 30 teachers and college students, 26 th AABE conference (Goa,
September 20, 2016); "
CUBE,2016_CUBE_Sep_22,2016-09-22,"Follow-up workshop on “Simple model systems and sophisticated research
questions”, for 30 teachers and college students, 26 th AABE conference (Goa, September 22, 2016);"
CUBE,2016_CUBE_Oct_1,2016-10-01,"CUBE- India Bioscience workshop for 15 participants, on ""Bridging the gap
between what is taught in the college and what is done in research labs"", Mount
Carmel College (Bangalore, October 1, 2016);"
CUBE,2016_CUBE_Oct_2,2016-10-02,"CUBE- Connecting to classroom, for 20 participants, National Centre for
Biological Sciences (Bangalore, October 2, 2016);"
CUBE,2016_CUBE_Oct_4,2016-10-04,"CUBE workshop (in collaboration with a Cubist from Jaipur), for 15 faculty and
graduate students, National Institute of Mental Health and Neurosciences
(Bangalore, October 4, 2016);"
glab,2016_glab_Oct_31,2016-10-31,"Workshop on making microscope with webcam, for 6 middle school participants (HBCSE, October 31, 2016);"
CUBE,2016_CUBE_Nov_1,2016-11-01,"CUBE Diwali Workshop for 20 students from CHM, KBP, VES colleges
(HBCSE, November 1-5, 2016);"
CUBE,2016_CUBE_Nov_19,2016-11-19,"Two-day workshop for 10students and 2 teachers on ""Regeneration Studies on
hydra and earthworm"" in collaboration with Agharkar Research Institute, Pune.
(HBCSE, November 19-20, 2016);"
CUBE,2016_CUBE_Nov_27,2016-11-27,"CUBE Diwali Meet, for 30 students (HBCSE, November 27, 2016);"
CUBE,2016_CUBE_Dec_1,2016-12-01,"Three-day workshop on “Teaching undergraduate biology through history of science”, for 3 teachers from Vivekanand Education Society's College of Arts, Science, and Commerce (HBCSE, December 1-3, 2016);"
clix,2016_clix_Dec_5,2016-12-05,"Hackathon between MIT team, Gnowledge Lab, CLIx Technology team for DLKit integration of Gstudio, TISS, for 15 participants (Mumbai, December 5-
9, 2016);"
CUBE,2016_CUBE_Dec_5,2016-12-05,"Follow up workshop of CUBE- Asian Association for Biology Education
Conference for 20 participants (Dhempe College and Carmell College, Goa and
BITS Pilani Goa, December 5- 9, 2016);"
CUBE,2016_CUBE_Dec_14,2016-12-14,"Half day CUBE workshop on “model organisms” for 90 junior college science
teachers, organized in collaboration with R. J. Jhunjhunwala college, (Mumbai,
December 14, 2016);"
CUBE,2016_CUBE_Dec_26,2016-12-26,"CUBE Goof-ups in Science, for 75 participants from various colleges in
Mumbai (HBCSE, December 26, 2016);"
CUBE,2016_CUBE_Dec_26,2016-12-26,"A week long CUBE Christmas Workshop on “model organism” for around 70
students (HBCSE, December 26, 2016 to January 1, 2017);"
CUBE,2017_CUBE_Jan_20,2017-01-20,"CUBE- Elphinstone College PRIMER Meet, attended by 30 Students and 2
teachers, Elphinstone College (Mumbai, January 20, 2017);"
CUBE,2017_CUBE_Jan_22,2017-01-22,"CUBE Winter Workshop Meet, 30 students from Mumbai, Baroda, Chennai
presented their work on model systems (HBCSE, January 22, 2017);"
CUBE,2017_CUBE_Jan_23,2017-01-23,"CUBE- KBP College Research Meet, attended by 30 students, KBP College,
Vashi (Navi Mumbai, January 23, 2017) ;"
CUBE,2017_CUBE_Feb_3,2017-02-03,"CUBE India Bioscience Workshop “Transforming classroom by collaborative
research and active learning”, for 30 college teachers , Garware College (Pune,
February 3, 2017);"
CUBE,2017_CUBE_Mar_24,2017-03-24,"CUBE Catalyst Workshop ""Building Context to Content: Remodeling of Class-
Lab Engagement Using Simple Model Systems"", for 50 undergraduate students, 15 senior teachers from across India (HBCSE, March 24-26, 2017);"
CUBE,2017_CUBE_Apr_4,2017-04-04,"CUBE Pre-Summer Workshop on designing assays, experimental analysis,
introduction of using simple model systems, for 20 participants from CHM
College, Elphinstone College, Mumbai and MSU Baroda, Gujarat (HBCSE,
April 4-30, 2017)"
CUBE,2017_CUBE_May_1,2017-05-01,"CUBE Summer workshop for 25 participants from Ranchi, Chennai
and Gujarat CUBE centres (HBCSE, May 1-31, 2017);"
CUBE,2017_CUBE_Jun_1,2017-06-01,"CUBE workshop on learning and memory studies with drosophila larvae,
isolation of nematods, learning and memory with C. elegans, etc. for 10
undergraduate students from Elphinstone College, Acharya Narendra Dev
College, Delhi and IIS University, Jaipur (HBCSE, June 1-15, 2017);"
glab,2017_glab_Jun_27,2017-06-27,"Workshop on Open Educational Resources for 15 junior college teachers, 10
participants from TISS, 3 participants from Azim Premji Foundation,
collaboratively organised by SCERT, Chattisgarh and TISS (Raipur, June 27-30,
2017);"
CUBE,2017_CUBE_Jun_29,2017-06-29,"CUBE workshop on simple model based system for 50 blind school students
organised by Makerwala Dhamtari (Dhamtari, June 29, 2017);"
CUBE,2017_CUBE_Jul_5,2017-07-05,"A four day workshop on (i) assessment of distance by different groups of
students; (ii) face recognition and its connection to ethnicity (HBCSE, July 5-8,
2017);"
CUBE,2017_CUBE_Jul_10,2017-07-10,"CUBE workshop for 10-12 students and teachers at BITS-Pilani, Goa (Goa, July
10-12, 2017);"
glab,2017_glab_Jul_30,2017-07-30,"Digital literacy workshop for 27 undergraduate teachers, collaboratively
organised by NUSSD, TISS (Maulana Azad University Jodhpur, July 30, 2017);"
CUBE,2017_CUBE_Aug_28,2017-08-28,"CUBE Royal College Workshop on “Initiating model organisms Fruitfly,
Moina, Pagalapos, Earthworm” for 30 undergraduate students and 2 teachers
(HBCSE, August 28, 2017);"
glab,2017_glab_Aug_28,2017-08-28,"Gnowledge Lab Open Educational Resources (OER) advanced training
workshop for SCERT, Chhattisgarh, organized in collaboration with CEIAR,
TISS (HBCSE, August 28- September 1, 2017);"
CUBE,2017_CUBE_Sep_3,2017-09-03,"CUBE M-Ward Workshop on “Introducing butterfly mapping and fruitfly
activity pattern (circadian rhythm)”, in collaboration with TISS, for around 50
college and school students (M-Power Centre, Deonar, held on Thursdays &
Saturdays from September 2017 onwards);"
CUBE,2017_CUBE_Oct_16,2017-10-16,"CUBE Diwali Workshop (HBCSE, October 16-30, 2017);"
CUBE,2017_CUBE_Nov_4,2017-11-04,"One day CUBE workshop for around 30 students/teachers of Indian Women Scientists Association (IWSA) (Navi Mumbai, November 4, 2017);"
CUBE,2017_CUBE_Nov_14,2017-11-14,"Two days workshop on activities such as Fruit fly trapping, Moina culturing,
Earthworm collection, Mango mapping, Butterfly mapping for around 200
students (Dalwai High school, Chiplun, November 14-15, 2017);"
CUBE,2017_CUBE_Dec_7,2017-12-07,"One day workshop to develop a hub with Moina model system for
approximately 50-60 students (Sanquelim College, Goa, December 7, 2017);"
CUBE,2017_CUBE_Dec_23,2017-12-23,"CUBE Christmas Workshop for 60 students of local colleges such as CHM
College, VES College, KBP College, Somaiya College, SIES College,
Elphinstone College (HBCSE, December 23, 2017 - January 2, 2018);"
CUBE,2018_CUBE_Jan_5,2018-01-05,"Extended CUBE Winter Workshop, for 10 students from Tilak College (HBCSE,
January 5-15, 2018);"
CUBE,2018_CUBE_Mar_16,2018-03-16,"Lecture-cum-workshop on Mango phenology mapping and fruit fly trapping
studies, simple model systems, for 70 students and 10 teachers, MGM School,
Varkala (Kerala, March 16-17, 2018)."
CUBE,2018_CUBE_Apr_1,2018-04-01,"Students CUBE Summer Workshop Session 1 on ""DIY - Do It Yourself"" activities
30 (Mumbai, Apr 1-10, 2018)"
glab,2018_glab_Apr_30,2018-04-30,"CGOER Open Educational Resources Workshop, HBCSE, April 30- May 3, 2018"
CUBE,2018_CUBE_May_1,2018-05-01,"Students CUBE Summer Workshop Session 2 on ""DIY - Do It Yourself"" activities 20 (Mumbai, 01.05.2018 to 07.05.2018)"
glab,2018_glab_Jun_7,2018-06-07,"OER Workshop CG, Chhattisgarh, 07.06.2018 to 08.06.2018"
CUBE,2018_CUBE_Jun_10,2018-06-10,"One day workshop on ""Activities of biodiversity at
doorstep, Fabrication of microscope"", for mentors of
Agastya International Foundation ( Turbhe, 10 June 2018)"
CUBE,2018_CUBE_Jun_12,2018-06-12,"Students CUBE June Workshop 30 (Mumbai, 12.06.2018 to 22.06.2018)"
CUBE,2018_CUBE_Jun_25,2018-06-25,"Teachers CUBE meeting-cum-workshop on model system
based studies, for M-Ward learning centre teachers 19 (HBCSE, 25.06.2018)"
CUBE,2018_CUBE_Jul_9,2018-07-09,"Students CUBE Monsoon Meet HBCSE 80 (HBCSE, 09.07.2018)"
CUBE,2018_CUBE_Jul_24,2018-07-24,"Eleven tinkering sessions for students of Grades 7-9 from Mumbai municipal school (HBCSE, 24 July- 2 August 2018)"
CUBE,2018_CUBE_Aug_17,2018-08-17,"Students Two days workshop on “Biological model systems”, at CUBE hub of Kanpur region Seth Anandram Jaipuria School, Kanpur 450 (Kanpur,17.08.2018 to 18.08.2018)"
makerspace,2018_makerspace_Aug_31,2018-08-31,"Teachers Makerspace Workshop for Do-It-Yourself microscope making using Webcam
Teachers from Navnirmiti organization HBCSE 15 31.08.2018"
CUBE,2018_CUBE_Sep_13,2018-09-13,"Students CUBE Mid-Term Workshop on ""Investigative biological research on topics"", for students and teachers, from 7 different colleges and a schools Mumbai 60 13.09.2018 to 17.09.2018"
glab,2018_glab_Sep_20,2018-09-20,"Teachers DOER Tools and resources School teachers Y. Y. Nijap School, Shirgaon 20 08.09.2018"
CUBE,2018_CUBE_Oct_30,2018-10-30,"Students CUBE Workshop Guru Ghasidas University, Bilaspur 120 30.10.2018 to 31.10.2018"
CUBE,2018_CUBE_Nov_1,2018-11-01,"Students Two day CUBE workshop on “Model system based research and follow-up”, for undergraduate students and a teacher Dyal Singh College & Acharya Narendra Dev College, Delhi 25 01.11.2018 to 02.11.2018"
CUBE,2018_CUBE_Nov_5,2018-11-05,"Students CUBE Diwali workshop on “Model system based
scientific research”, for undergraduate students from
6 colleges
Mumbai 40 05.11.2018 to 22.11.2018"
CUBE,2018_CUBE_Nov_9,2018-11-09,"Workshop with Afghanistan Teachers, HBCSE, 9 November 2018"
CUBE,2018_CUBE_Nov_12,2018-11-12,"Four days professional development workshop for high school teachers, Vijayawada, 12-15 November 2018"
makerspace,2018_makerspace_Nov_17,2018-11-17,"Teachers One day workshop on “Hands-On session with model organisms” and “DIY Microscope activity”, for teachers from Somaiya College HBCSE 10 17.11.2018"
CUBE,2018_CUBE_Dec_14,2018-12-14,Students CUBE-CURE workshop on “Simple model systems & sophisticated research questions” Atulmoni Polytechnic 70 14.12.2018
CUBE,2018_CUBE_Dec_15,2018-12-15,"Students Workshop on Simple Model Systems IISER, Kolkata 100 15.12.2018"
CUBE,2018_CUBE_Dec_17,2018-12-17,"Students One day CUBE workshop on “Simple model systems”, for students and teachers of Garden High School and Kalyani Public School, Kolkata Indian Institute of Science Education and Research, Kolkata 100 17.12.2018"
CUBE,2018_CUBE_Dec_23,2018-12-23,"Students CUBE workshop on “Model systems and follow-up meet”, for students and teachers of Mambaram Higher Secondary School (MHSS) School and Government College, Sanquelim Birla Institute of Technology, Pilani, Goa 40 23.12.2018"
CUBE,2019_CUBE_Jan_31,2019-01-31,"Students Two day CUBE workshop on “Model systems based scientific research”, for students & teachers from Telangana Social Welfare 60 31.01.2019 to 01.02.2019"
CUBE,2019_CUBE_Feb_2,2019-02-02,"Students Model System based Scientific Research Government College for Women, Guntur 200 02.02.2019 to 03.02.2019"
CUBE,2019_CUBE_Feb_22,2019-02-22,Students CUBE workshop and conference on “Collaboratively learning to do experiments and research” HBCSE 150 22.02.2019 to 25.02.2019
CUBE,2019_CUBE_Mar_14,2019-03-14,"Sir Sayyed School Workshop, Mumbai, 14 March 2019"
makerspace,2019_makerspace_Mar_25,2019-03-25,"Students Makerspace Workshop for Weather Station Development ITI Students and Two Teachers Children Home& Society, Mankhurd 20 25.03.2019 to 26.03.2019"
CUBE,2019_CUBE_Apr_15,2019-04-15,Students CUBE summer workshop - HBCSE 40 15.04.2019 to 30.04.2019
glab,2019_glab_Apr_30,2019-04-30,Teacher Educators or Resource Persons Chhattisgarh open educational resources (OER) workshop for adding resources in NROER NROER HBCSE 16 30.04.2019 to 03.05.2019
CUBE,2019_CUBE_May_1,2019-05-01,Students CUBE summer session - HBCSE 60 01.05.2019 to 15.06.2019
glab,2019_glab_Jun_4,2019-06-04,(Technical Workshop) Docker session conducted for Mr. A. J. Naik from T.I.F.R. and HBCSE Computer lab team by Gnowledge lab for making it easier and helping them slowly start migrating their existing infrastructure towards using docker - HBCSE 4 04.06.2019
stemgames,2019_stemgames_Jun_14,2019-06-14,Students Introductory program about STEM games - IISER Pune 60 14.06.2019
stemgames,2019_stemgames_Jul_5,2019-07-05,Students STEM games program was conducted during inauguration of science nurture program Indian Women Scientists' Association (IWSA) 40 05.07.2019
stemgames,2019_stemgames_Jul_22,2019-07-22,"Students Four day bootcamp on “STEM games activities” Neerja Modi
School, Jaipur 130 22.07.2019 to 25.07.2019"
makerspace,2019_makerspace_Jul_29,2019-07-29,Teachers Two day workshop Eklavya Amravati 60 29.07.2019 to 31.07.2019
CUBE,2019_CUBE_Aug_16,2019-08-16,Teachers CUBE workshop/conference on STEM games - HBCSE 30 16.08.2019 to 18.08.2019
CUBE,2019_CUBE_Aug_16,2019-08-16,"CUBE workshop/conference on STEM Games, for around 30-35 outstation participants from 10 centres across country (HBCSE, August 16-18, 2019);"
CUBE,2019_CUBE_Dec_24,2019-12-24,"Students CUBE Christmas workshop on “Model system
based scientific research”, for undergraduate
students from 7 colleges
Mumbai 40 24.12.2018 to 01.01.2019"
makerspace,2020_makerspace_Feb_4,2020-02-04,"Students Four day makerspace workshop for students and
teachers from 11 different schools of Shirpur - Shirpur 100 04.02.2020 to 07.02.2020"


dataset_id,l3_filename,google_id,L0_data_directory,LTER site,contact,responsible person,L3 status,provided identifier,doi,date accessed,date published,source_url_or_contact,body size,dispersal habit,mobility,trophic group,biome,organism_group,initial.year,study.length,n.years,n.plots,n.taxa,organism
gce-mollusc-compagnoni,L3-gce-mollusc-compagnoni.csv,1Cy3RdJzAPIfW5euTGUIiHEaCJC8cCQTx,GCE-298molluscs-popler,GCE,popler-Bishop,Aldo,needs cleaning,"(Compiled from 14 different datasets,  see comment for query)",NA,5/15/2018,NA,http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-1407; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-1302; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-1208a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-1010a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0812a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0804a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0705a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0704b1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0704a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0502a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0501a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0412b1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0412a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0305a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0305b1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0301a; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-1101a1; http://gce-lter.marsci.uga.edu/public/app/dataset_details.asp?accession=INV-GCEM-0705c1,meso,need to look at taxa,mobile,consumers,marine,invertebrates,2000,14,14,43,11,mollusc
sev-plants-compagnoni,L3-sev-plants-compagnoni.csv,19QVLG4hvOy0kH3e4qzk4CxZc4eWRm1oy,SEV-53pinonJuniper-popler,SEV,popler-Muldavin,Eric/Aldo,complete,knb-lter-sev.278.245672,http://dx.doi.org/10.6073/pasta/f19a93a5c6879a9380c394dabbf2db3a,5/15/2018,2015-05-06,http://sev.lternet.edu/node/1718,macro,passive,sessile,primary producers,terrestrial,plants,NA,NA,NA,NA,NA,NA
jrn-plants-compagnoni,L3-jrn-plants-compagnoni.csv,1yuqNwBD6TVkdo9UzZeJtHxJjPzHrVVyx,JRN-677plantDensity-popler,JRN,popler-Chapline,Aldo,complete,knb-lter-jrn.210351002.75,http://dx.doi.org/10.6073/pasta/75f27f49b1ea89de027d69c8697658b9,5/15/2018,2013,http://jornada.nmsu.edu/content/jornada-experimental-range-permanent-quadrat-chart-data-beginning-1915-plant-density,macro,passive,sessile,primary producers,terrestrial,plants,1915,24,18,10,113,plants
hays-plants-compagnoni,L3-hays-plants-compagnoni.csv,1I3G4PWuQWovgUk1_GQ43Y6snqL72pnBx,HAYS-plants-compagnoni,HAYS,Peter Adler,Aldo,complete,NA,doi.org/10.1890/0012-9658(2007)88[2673:LMQFKP]2.0.CO;2,NA,NA,http://esapubs.org/archive/ecol/E088/161/,macro,passive,sessile,primary producers,terrestrial,plants,NA,NA,NA,NA,NA,NA
sgs-plants-compagnoni,L3-sgs-plants-compagnoni.csv,1-CvqdA4DCGB51B3geVTwN5uQcvFEBcnr,SGS-74grazed-popler,SGS,popler-Milchunas,Aldo,complete but needs data checks!,knb-lter-sgs.527.1,dx.doi.org/10.6073/pasta/f8aa046f7bb6533bb2cb52a64cdfb996,NA,NA,dx.doi.org/10.6073/pasta/f8aa046f7bb6533bb2cb52a64cdfb996,macro,passive,sessile,primary producers,terrestrial,plants,NA,NA,NA,NA,NA,NA
sev-arthropods-compagnoni,L3-sev-arthropods-compagnoni.csv,1eXE5otabcA87KWGgeid92h7sKy8jKdqN,SEV-54arthropods-popler,SEV,popler-lightfoot,Aldo,"complete, but needs data check",knb-lter-sev.29.175390,http://dx.doi.org/10.6073/pasta/9e7e6dc9c9d8f72e9e0bca07a1e76ccd,5/15/2018,NA,http://sev.lternet.edu/data/sev-29,meso,active,mobile,consumers,terrestrial,invertebrates,1992,13,13,10,316,arthropods
sev-grasshopper-compagnoni,L3-sev-grasshopper-compagnoni.csv,1fvq48jYfqsaCu7I41qaottXkcmdSCQvn,SEV-grasshopper-compagnoni,SEV,NA,Aldo,complete,knb-lter-sev.106.214968,http://dx.doi.org/10.6073/pasta/c1d40e9d0ec610bb74d02741e9d22576,NA,NA,http://dx.doi.org/10.6073/pasta/c1d40e9d0ec610bb74d02741e9d22576,meso,active,mobile,consumers,terrestrial,invertebrates,1992,22,22,10,54,grasshopper
sbc-fish-castorani,L3-sbc-fish-castorani.csv,0BxUZSA1Gn1HZeEtNSEtJRDQxa2M,SBC-survey-fish-Castorani_Lamy,SBC,Lamy / Castorani,Max,complete,knb-lter-sbc.50.7,https://doi.org/10.6073/pasta/d5fd133eb2fd5bea885577caaf433b30.,11/30/2018,06/26/2018,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-sbc.50.6,macro,active,mobile,consumers,marine,fish,2001,18,18,9,64,fish
sbc-mobileInverts-castorani,L3-sbc-mobileInverts-castorani.csv,0BxUZSA1Gn1HZWVZsdFdrRmhpTm8,SBC-survey-mobile_invert-Castorani_Lamy,SBC,Lamy / Castorani,Max,complete,knb-lter-sbc.50.7,https://doi.org/10.6073/pasta/d5fd133eb2fd5bea885577caaf433b30.,11/30/2018,06/26/2018,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-sbc.50.6,meso,active,mobile,consumers,marine,invertebrates,2001,18,18,9,34,mobileInverts
sbc-sessileInverts-castorani,L3-sbc-sessileInverts-castorani.csv,0BxUZSA1Gn1HZYVp0MXBod2oxczQ,SBC-survey-sessile_invert-Castorani_Lamy,SBC,Lamy / Castorani,Max,complete,knb-lter-sbc.50.7,https://doi.org/10.6073/pasta/d5fd133eb2fd5bea885577caaf433b30.,11/30/2018,06/26/2018,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-sbc.50.6,meso,passive,sessile,consumers,marine,sessile invertebrates,2001,18,18,9,71,sessileInverts
sbc-algae-castorani,L3-sbc-algae-castorani.csv,0BxUZSA1Gn1HZZWl6d3BMeVNlT0U,SBC-survey-algae-Castorani_Lamy,SBC,Lamy / Castorani,Max,complete,knb-lter-sbc.50.7,https://doi.org/10.6073/pasta/d5fd133eb2fd5bea885577caaf433b30.,11/30/2018,06/26/2018,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-sbc.50.6,macro,passive,sessile,primary producers,marine,macroalgae,2001,18,18,9,59,algae
jrn-lizards-hope,L3-jrn-lizards-hope.csv,0B7o8j0RLpcxiYW10X1djMTBGM0U,JRN-lizard-Hope,JRN,Hope,Nina,complete,knb-lter-jrn.210007001.36,http://dx.doi.org/10.6073/pasta/ff37b4cace16a9943575f3fd7067064e,6/7/2017,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-jrn.2100007001.13,macro,active,mobile,consumers,terrestrial,herps,1990,16,16,9,18,lizards
cdr-plantsABC-compagnoni,L3-cdr-plantsABC-compagnoni.csv,1iJEhY82nu9PVw1yVVxjGr7-hO1DnqjQz,CDR-plants,CDR,Compagnoni,Aldo,complete,knb-lter-cdr.14.8,http://dx.doi.org/10.6073/pasta/93b27926879861815ebb021bfd6f14ae,6/7/2017,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-cdr.527.5,macro,passive,sessile,primary producers,terrestrial,plants,1982,23,23,18,128,plantsABC
cdr-plantsD-compagnoni,L3-cdr-plantsD-compagnoni.csv,1OK4nBDmHiHgdNwQStwb8F_stVqqsERJm,CDR-plants,CDR,Compagnoni,Aldo,complete,knb-lter-cdr.14.8,http://dx.doi.org/10.6073/pasta/93b27926879861815ebb021bfd6f14ae,6/7/2017,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-cdr.527.5,macro,passive,sessile,primary producers,terrestrial,plants,1982,23,23,5,128,plantsD
fce-diatoms-catano,L3-fce-diatoms-catano.csv,1twY-ZsfAkgQDzxXBhbn074O7lDks2KCT,FCE-diatoms-Gaiser-Marazzi,FCE,Marazzi,Rolando,in prep,knb-lter-fce.1211.3,https://doi.org/10.6073/pasta/cb0f7e88d28075a6ff1f59d008bb732c,06/02/2017,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-fce.1211.3,micro,passive,sessile,primary producers,freshwater,algae,2005,7,7,30,192,diatoms
and-plants-mtStHelens,L3-and-plants-mtStHelens.csv,18fEHgvT0mcHuiLY1H3h-bOl41wVEcL5S,AND-plants,AND,Mt St Helens,Aldo,complete,Ecology data paper,https://doi.org/10.1890/09-2357.1,NA,NA,http://esapubs.org/archive/ecol/E091/152/,macro,passive,sessile,primary producers,terrestrial,plants,1989,21,21,12,85,plants
luq-snails-compagnoni,L3-luq-snails-compagnoni.csv,11xfteAue9eXtZeCotUCazUMzXraWXiVt,LUQ-snails,LUQ,NA,Aldo,complete,knb-lter-luq.107.9996736,http://dx.doi.org/10.6073/pasta/ec88f3dd4ed8e172802b52ff3bb82aa8,NA,NA,http://dx.doi.org/10.6073/pasta/ec88f3dd4ed8e172802b52ff3bb82aa8,meso,active,mobile,consumers,terrestrial,invertebrates,1991,27,27,40,19,snails
cap-birds-banville,L3-cap-birds-banville.csv,18fvkVN_x2DYCY7ssCSOGANgYjVCFUHZw,CAP-birds-Banville,CAP,Banville/Andrade,Riley,complete,knb-lter-cap.46.15,http://dx.doi.org/10.6073/pasta/201add557165740926aab6e056db6988,"June 7, 2017",NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-cap.46.13,macro,active,mobile,consumers,terrestrial,birds,2001,16,16,35,104,birds
cdr-grasshopper-compagnoni,L3-cdr-grasshopper-compagnoni.csv,1UzmNyjqOCNrRpagCCLXsHMlSlyM1WJN_,CDR-grasshoppers,CDR,NA,Aldo,complete,knb-lter-luq.107.9996736,http://dx.doi.org/10.6073/pasta/239b3023d75d83e795a15b36fac702e2,NA,NA,http://dx.doi.org/10.6073/pasta/239b3023d75d83e795a15b36fac702e2,meso,active,mobile,consumers,terrestrial,invertebrates,1989,18,18,19,51,grasshopper
ntl-fish-stanleyLottig,L3-ntl-fish-stanleyLottig.csv,0B2P104M94skvOVBOZnIyUGQ1ZVU,NTL_Fish,NTL,Stanley,Nina,complete,knb-lter-ntl.7.24,http://dx.doi.org/10.6073/pasta/7ed3313d08fbfc92656262b977508340,04/25/2018,NA,http://dx.doi.org/10.6073/pasta/7ed3313d08fbfc92656262b977508340,macro,active,mobile,consumers,freshwater,fish,1981,37,37,5,58,fish
bes-birds-nilon,L3-bes-birds-nilon.csv,1ozkicOn1NPNcpe-s_-6WK8YtgqqmmTQV,BES-birds-Nilon,BES,NA,Shawn,complete,knb-lter-bes.543.170,http://dx.doi.org/10.6073/pasta/c790bd0b1bdde870b5b1e7f631d3d38e,"April 20, 2018",NA,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-bes.543.170,macro,active,mobile,consumers,terrestrial,birds,2005,5,5,52,33,birds
sgs-plants-catano,L3-sgs-plants-catano.csv,1osf8W0yTs4gYjGBvbgnz92p2vZ5G08lm,SGS-plants,SGS,popler-Stapp,Eric,complete,knb-lter-sgs.140.17,https://doi.org/10.6073/pasta/f6ecfd9d99c9cc83e47469d10b620cfb,NA,2013,http://hdl.handle.net/10217/83458,macro,passive,sessile,primary producers,terrestrial,plants,1999,8,8,6,84,plants
knz-grasshopper-compagnoni,L3-knz-grasshopper-compagnoni.csv,1FliDv4JFu732-2VLlfR4f3FIZPGcZrI5,KNZ-grasshoppers,KNZ,NA,Aldo,complete,knb-lter-knz.29.12,http://dx.doi.org/10.6073/pasta/aec67f5d71d14cd39fe8b6b34b4719f4,11/7/2018,NA,https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-knz.29.12,meso,active,mobile,consumers,terrestrial,invertebrates,1996,20,19,13,43,grasshopper
fce-fish-rehageWet,L3-fce-fish-rehageWet.csv,19aoF1lPfeqh3kLFZkgTMqXp_DU025vJu,FCE-fish-Rehage,FCE,Rehage,Rolando,complete,knb-lter-fce.1164.6,https://doi.org/10.6073/pasta/4cc7a504b072f661f9b82c7c4536bd30,NA,NA,from contact - Jesse; knb data protected,macro,active,mobile,consumers,freshwater,fish,2011,6,6,14,56,fish
fce-fish-rehageDry,L3-fce-fish-rehageDry.csv,19_8JhIAxcaBw69OShxlkDfF3i0Ml97GJ,FCE-fish-Rehage,FCE,Rehage,Rolando,complete,knb-lter-fce.1164.6,https://doi.org/10.6073/pasta/4cc7a504b072f661f9b82c7c4536bd30,NA,NA,from contact - Jesse; knb data protected,macro,active,mobile,consumers,freshwater,fish,2006,12,11,10,56,fish
and-birds-wisnoski,L3-and-birds-wisnoski.csv,13yR9S2y3VS0uevQ0VRvNziy-hbkI8E0n,AND-birds,AND,Betts,Nathan,complete,knb-lter-and.4781.2,https://doi.org/10.6073/pasta/b75f34d8de6fcfa59c882bb1acf96226,NA,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-and.4781.2,macro,active,mobile,consumers,terrestrial,birds,2009,5,5,184,81,birds
cap-herps-banville,L3-cap-herps-banville.csv,19Gu7nuSiUmIKUyP2qz0x9MBKMmOJxbFV,CAP-herps-Banville,CAP,Banville/Andrade,Riley,complete,knb-lter-cap.627.3,http://dx.doi.org/10.6073/pasta/2999764ec0527e78d44cc9ea9fc14bf0,"June 7, 2017",NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-cap.627.2,macro,active,mobile,consumers,terrestrial,herps,2013,5,5,7,18,herps
mcr-fish-castorani,L3-mcr-fish-castorani.csv,0BxUZSA1Gn1HZV3BuelZVN1NRUnc,MCR-fish,MCR,Castorani,Max,in prep - Nina,knb-lter-mcr.6.54,http://dx.doi.org/10.6073/pasta/d688610e536f54885a3c59d287f6c4c3,6/8/2017,5/9/2016,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-mcr.6.54,macro,active,mobile,consumers,marine,fish,2006,10,10,6,376,fish
mcr-inverts-castorani,L3-mcr-inverts-castorani.csv,0BxUZSA1Gn1HZTnYzZVdwM3hyN2M,MCR-inverts,MCR,Castorani,Max,in prep - Nina,knb-lter-mcr.7.28,http://dx.doi.org/10.6073/pasta/8e7b3a0c7a8bf315739921861cc79d10,6/8/2017,3/30/2015,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-mcr.7.28,macro,active,mobile,consumers,marine,invertebrates,2005,11,11,6,13,inverts
mcr-algae-castorani,L3-mcr-algae-castorani.csv,0BxUZSA1Gn1HZenhxaVJ6bWtVdDg,MCR-algae,MCR,Castorani,Max,in prep - Nina,knb-lter-mcr.8.28,http://dx.doi.org/10.6073/pasta/79a6edbcf3aa2380d43deed778856416,6/8/2017,10/23/2015,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-mcr.8.28,macro,passive,sessile,primary producers,marine,algae,2006,10,10,6,73,algae
mcr-coral-castorani,L3-mcr-coral-castorani.csv,0BxUZSA1Gn1HZZGR2VjdMbmU3Mm8,MCR-coral,MCR,Castorani,Max,in prep - Nina,knb-lter-mcr.4.33,http://dx.doi.org/10.6073/pasta/1f05f1f52a2759dc096da9c24e88b1e8,6/8/2017,12/9/2015,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-mcr.4.33,macro,passive,sessile,consumers,marine,coral,2005,11,11,6,31,coral
ntl-zooplankton-stanleyLottig,L3-ntl-zooplankton-stanleyLottig.csv,0B2P104M94skvcUl6eGhhSDhtaDA,NTL-Trout-Lake-zooplankton,NTL,Stanley,Nina,let's talk,knb-lter-ntl.37.14,http://dx.doi.org/10.6073/pasta/c866e3663bae76388f63233a5fdfb3d4,6/8/2017,NA,https://portal.lternet.edu/nis/mapbrowse?packageid=knb-lter-ntl.37.14,micro,active,mobile,consumers,freshwater,zooplankton,1982,34,34,7,143,zooplankton
usvi-coral-castorani,L3-usvi-coral-castorani.csv,0BxUZSA1Gn1HZZGowdUVCTTdtXzg,CSUN-USVI-coral,USVI,Castorani,Max,complete,edi.291.1,https://doi.org/10.6073/pasta/8cd311eae47675f714717fe78c737634,5/8/2017,1/23/2019,https://portal.edirepository.org/nis/mapbrowse?packageid=edi.291.1,macro,passive,sessile,primary producers,marine,coral,1992,24,24,6,34,coral


_MEMBER_WS_c1_which_mclass____4___1_,_LogP_WS_c1_which_mclass____4___1_,GO,Description,_PATTERN_,_RANK_,CHILD_GO_WS_c1_which_mclass____4___1_
1,-12.024366363087143,GO:0051179,localization,M1,1,GO:0046907 intracellular transport
1,-5.624671228270232,GO:0008152,metabolic process,M1,1,GO:0006397 mRNA processing
1,-4.730042103559538,GO:0002376,immune system process,M1,1,GO:0002376 immune system process
1,-4.574149609364033,GO:0050896,response to stimulus,M1,1,GO:0042493 response to drug
1,-4.434448126332572,GO:0071840,cellular component organization or biogenesis,M1,1,GO:0016050 vesicle organization
1,-4.103194457318683,GO:0048519,negative regulation of biological process,M1,1,GO:0010629 negative regulation of gene expression
1,-3.717900597518159,GO:0032501,multicellular organismal process,M1,1,GO:2000037 regulation of stomatal complex patterning
1,-3.5783077742940863,GO:0050789,regulation of biological process,M1,1,GO:0080134 regulation of response to stress
1,-3.438656083995893,GO:0022414,reproductive process,M1,1,GO:0010228 vegetative to reproductive phase transition of meristem
1,-3.0503368912783513,GO:0051704,multi-organism process,M1,1,GO:0009294 DNA mediated transformation
1,-2.730303697221089,GO:0032502,developmental process,M1,1,GO:0050793 regulation of developmental process
1,-2.642622586696263,GO:0048518,positive regulation of biological process,M1,1,GO:1902751 positive regulation of cell cycle G2/M phase transition
1,-2.4235372542631834,GO:0023052,signaling,M1,1,GO:0035556 intracellular signal transduction
1,-2.3725346575442483,GO:0040007,growth,M1,1,GO:0010449 root meristem growth
1,-2.345699356041886,GO:0009987,cellular process,M1,1,GO:0008219 cell death
1,-2.2753400508819444,GO:0065007,biological regulation,M1,1,GO:0042446 hormone biosynthetic process


sample,Assay Type,AvgSpotLen,Bases,BioProject,BioSample,Bytes,Center Name,Consent,DATASTORE filetype,DATASTORE provider,DATASTORE region,clinical_information,Experiment,GEO_Accession (exp),gestational_age,Instrument,LibraryLayout,LibrarySelection,LibrarySource,Organism,Platform,ReleaseDate,Sample Name,source_name,SRA Study
SRR10916911,RNA-Seq,300,5851500900,PRJNA602315,SAMN13888095,2510035848,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",preeclampsia,SRX7584224,GSM4277245,38.2,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277245,placenta,SRP243468
SRR10916912,RNA-Seq,300,6033315900,PRJNA602315,SAMN13888094,2603962819,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",preeclampsia,SRX7584225,GSM4277246,37.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277246,placenta,SRP243468
SRR10916913,RNA-Seq,300,5837922300,PRJNA602315,SAMN13888093,2532024065,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",preeclampsia,SRX7584226,GSM4277247,37.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277247,placenta,SRP243468
SRR10916914,RNA-Seq,300,5384850600,PRJNA602315,SAMN13888092,2333085166,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",preeclampsia,SRX7584227,GSM4277248,38.4,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277248,placenta,SRP243468
SRR10916915,RNA-Seq,300,5875015500,PRJNA602315,SAMN13888091,2528549701,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",control,SRX7584228,GSM4277249,37.6,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277249,placenta,SRP243468
SRR10916916,RNA-Seq,300,5094186900,PRJNA602315,SAMN13888090,2203909044,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",control,SRX7584229,GSM4277250,38.2,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277250,placenta,SRP243468
SRR10916917,RNA-Seq,300,6618529800,PRJNA602315,SAMN13888089,2860990328,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",control,SRX7584230,GSM4277251,38.4,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277251,placenta,SRP243468
SRR10916918,RNA-Seq,300,5810447100,PRJNA602315,SAMN13888088,2535489561,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",control,SRX7584231,GSM4277252,38.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277252,placenta,SRP243468
SRR11498039,RNA-Seq,250,6707344500,PRJNA623568,SAMN14549361,2548800844,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073870,GSM4458410,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458410,Placenta,SRP255609
SRR11498040,RNA-Seq,250,5228652000,PRJNA623568,SAMN14549360,2030883717,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073871,GSM4458411,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458411,Placenta,SRP255609
SRR11498041,RNA-Seq,250,5841145500,PRJNA623568,SAMN14549359,2060468456,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073872,GSM4458412,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458412,Placenta,SRP255609
SRR11498042,RNA-Seq,250,6134030000,PRJNA623568,SAMN14549358,2156037998,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073873,GSM4458413,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458413,Placenta,SRP255609
SRR11498043,RNA-Seq,250,5857029000,PRJNA623568,SAMN14549357,2215784380,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073874,GSM4458414,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458414,Placenta,SRP255609
SRR11498044,RNA-Seq,250,8260164000,PRJNA623568,SAMN14549356,2899528981,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073875,GSM4458415,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458415,Placenta,SRP255609
SRR11498045,RNA-Seq,250,5756372750,PRJNA623568,SAMN14549355,2146283280,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073876,GSM4458416,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458416,Placenta,SRP255609
SRR11498046,RNA-Seq,250,8774353750,PRJNA623568,SAMN14549354,3307261673,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073877,GSM4458417,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458417,Placenta,SRP255609
SRR11498047,RNA-Seq,250,7575094250,PRJNA623568,SAMN14549353,2946094556,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",eospe,SRX8073878,GSM4458418,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458418,Placenta,SRP255609
SRR11498048,RNA-Seq,250,6315704250,PRJNA623568,SAMN14549352,2388050889,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073879,GSM4458419,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458419,Placenta,SRP255609
SRR11498049,RNA-Seq,250,5234651000,PRJNA623568,SAMN14549351,2145819426,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073880,GSM4458420,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458420,Placenta,SRP255609
SRR11498050,RNA-Seq,250,5441768500,PRJNA623568,SAMN14549350,1912215837,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073881,GSM4458421,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458421,Placenta,SRP255609
SRR11498051,RNA-Seq,250,5248079500,PRJNA623568,SAMN14549349,1847537049,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073882,GSM4458422,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458422,Placenta,SRP255609
SRR11498052,RNA-Seq,250,5213271250,PRJNA623568,SAMN14549348,1859924155,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073883,GSM4458423,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458423,Placenta,SRP255609
SRR11498053,RNA-Seq,250,5175471250,PRJNA623568,SAMN14549347,1840323120,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073884,GSM4458424,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458424,Placenta,SRP255609
SRR11498054,RNA-Seq,250,5430952000,PRJNA623568,SAMN14549342,1911059637,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073885,GSM4458425,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458425,Placenta,SRP255609
SRR11498055,RNA-Seq,250,6592196750,PRJNA623568,SAMN14549341,2511179244,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073886,GSM4458426,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458426,Placenta,SRP255609
SRR11498056,RNA-Seq,250,7224091250,PRJNA623568,SAMN14549340,2705017283,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073887,GSM4458427,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458427,Placenta,SRP255609
SRR11498057,RNA-Seq,250,6361553750,PRJNA623568,SAMN14549346,2386401940,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073888,GSM4458428,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458428,Placenta,SRP255609
SRR11498058,RNA-Seq,250,5969768500,PRJNA623568,SAMN14549345,2218972389,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073889,GSM4458429,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458429,Placenta,SRP255609
SRR11498059,RNA-Seq,250,5862383500,PRJNA623568,SAMN14549344,2176535488,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073890,GSM4458430,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458430,Placenta,SRP255609
SRR11498060,RNA-Seq,250,5819301500,PRJNA623568,SAMN14549343,2191984914,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073891,GSM4458431,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458431,Placenta,SRP255609
SRR11498061,RNA-Seq,250,5334998000,PRJNA623568,SAMN14549339,2020553197,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073892,GSM4458432,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458432,Placenta,SRP255609
SRR11498062,RNA-Seq,250,7016941250,PRJNA623568,SAMN14549338,2624634563,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073893,GSM4458433,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458433,Placenta,SRP255609
SRR11498063,RNA-Seq,250,6992219750,PRJNA623568,SAMN14549337,2679010079,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073894,GSM4458434,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458434,Placenta,SRP255609
SRR11498064,RNA-Seq,250,8406434750,PRJNA623568,SAMN14549336,3274479182,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073895,GSM4458435,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458435,Placenta,SRP255609
SRR11498065,RNA-Seq,250,6372816000,PRJNA623568,SAMN14549335,2308349042,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073896,GSM4458436,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458436,Placenta,SRP255609
SRR11498066,RNA-Seq,250,5721086500,PRJNA623568,SAMN14549334,2081096448,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073897,GSM4458437,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458437,Placenta,SRP255609
SRR11498067,RNA-Seq,250,6320706250,PRJNA623568,SAMN14549333,2309138769,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073898,GSM4458438,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458438,Placenta,SRP255609
SRR11498068,RNA-Seq,250,6129292000,PRJNA623568,SAMN14549332,2223234786,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073899,GSM4458439,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458439,Placenta,SRP255609
SRR11498069,RNA-Seq,250,7914199250,PRJNA623568,SAMN14549331,2985305823,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073900,GSM4458440,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458440,Placenta,SRP255609
SRR11498070,RNA-Seq,250,10292518250,PRJNA623568,SAMN14549330,3881011504,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073901,GSM4458441,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458441,Placenta,SRP255609
SRR11498071,RNA-Seq,250,5258229500,PRJNA623568,SAMN14549412,1979383915,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073902,GSM4458442,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458442,Placenta,SRP255609
SRR11498072,RNA-Seq,250,5573051750,PRJNA623568,SAMN14549411,2036568739,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073903,GSM4458443,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458443,Placenta,SRP255609
SRR11498073,RNA-Seq,250,5084821500,PRJNA623568,SAMN14549410,1871457545,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073904,GSM4458444,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458444,Placenta,SRP255609
SRR11498074,RNA-Seq,250,6162808500,PRJNA623568,SAMN14549409,2276896798,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073905,GSM4458445,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458445,Placenta,SRP255609
SRR11498075,RNA-Seq,250,6505293000,PRJNA623568,SAMN14549408,2407887150,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073906,GSM4458446,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458446,Placenta,SRP255609
SRR11498076,RNA-Seq,250,6345172250,PRJNA623568,SAMN14549407,2369771884,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073907,GSM4458447,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458447,Placenta,SRP255609
SRR11498077,RNA-Seq,250,5411214250,PRJNA623568,SAMN14549406,2006719456,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073908,GSM4458448,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458448,Placenta,SRP255609
SRR11498078,RNA-Seq,250,6276562500,PRJNA623568,SAMN14549405,2407767646,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073909,GSM4458449,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458449,Placenta,SRP255609
SRR11498079,RNA-Seq,250,7387090250,PRJNA623568,SAMN14549404,2781772751,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073910,GSM4458450,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458450,Placenta,SRP255609
SRR11498080,RNA-Seq,250,4819523750,PRJNA623568,SAMN14549403,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073911,GSM4458451,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458451,Umbilical Cord Blood,SRP255609
SRR11498081,RNA-Seq,250,5463258500,PRJNA623568,SAMN14549402,2171917895,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",Normal,SRX8073912,GSM4458452,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458452,Umbilical Cord Blood,SRP255609


Run,Assay Type,AvgSpotLen,Bases,BioProject,BioSample,Bytes,Cell_type,Center Name,Consent,DATASTORE filetype,DATASTORE provider,DATASTORE region,Experiment,GEO_Accession (exp),Instrument,LibraryLayout,LibrarySelection,LibrarySource,Organism,Platform,ReleaseDate,replicate,Sample Name,source_name,SRA Study,time,treatment,batch
SRR8843729,RNA-Seq,101,1527502992,PRJNA530759,SAMN11333480,968955894,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631513,GSM3704124,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704124,T_20min,SRP190499,20 min,insulin,1
SRR8843730,RNA-Seq,101,1444145672,PRJNA530759,SAMN11333479,920488633,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631514,GSM3704125,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704125,T_40min,SRP190499,40 min,insulin,1
SRR8843731,RNA-Seq,101,2018446115,PRJNA530759,SAMN11333478,1253953835,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631515,GSM3704126,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704126,T_60min,SRP190499,60 min,insulin,1
SRR8843733,RNA-Seq,101,1953746323,PRJNA530759,SAMN11333565,1215370944,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631517,GSM3704128,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704128,T_100min,SRP190499,100 min,insulin,1
SRR8843734,RNA-Seq,101,1931925172,PRJNA530759,SAMN11333564,1200689822,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631518,GSM3704129,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704129,T_120min,SRP190499,120 min,insulin,1
SRR8843735,RNA-Seq,101,1657134169,PRJNA530759,SAMN11333477,1028278619,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631519,GSM3704130,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704130,T_140min,SRP190499,140 min,insulin,1
SRR8843736,RNA-Seq,101,1792808883,PRJNA530759,SAMN11333503,1113211143,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631520,GSM3704131,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704131,T_160min,SRP190499,160 min,insulin,1
SRR8843737,RNA-Seq,101,1447588257,PRJNA530759,SAMN11333502,899343588,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631521,GSM3704132,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704132,T_180min,SRP190499,180 min,insulin,1
SRR8843738,RNA-Seq,101,1150039429,PRJNA530759,SAMN11333501,716258073,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631522,GSM3704133,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704133,T_0min,SRP190499,baseline control,baseline control,2
SRR8843739,RNA-Seq,101,1647020231,PRJNA530759,SAMN11333500,1022975014,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631523,GSM3704134,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704134,T_20min,SRP190499,20 min,insulin,2
SRR8843740,RNA-Seq,101,1791694954,PRJNA530759,SAMN11333499,1082726879,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631524,GSM3704135,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704135,T_40min,SRP190499,40 min,insulin,2
SRR8843741,RNA-Seq,101,1783021680,PRJNA530759,SAMN11333498,1080125871,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631525,GSM3704136,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704136,T_60min,SRP190499,60 min,insulin,2
SRR8843742,RNA-Seq,101,1910598921,PRJNA530759,SAMN11333497,1154996254,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631526,GSM3704137,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704137,T_80min,SRP190499,80 min,insulin,2
SRR8843743,RNA-Seq,101,1586710101,PRJNA530759,SAMN11333496,967199621,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631527,GSM3704138,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704138,T_100min,SRP190499,100 min,insulin,2
SRR8843744,RNA-Seq,101,1912736283,PRJNA530759,SAMN11333495,1163131438,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631528,GSM3704139,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704139,T_120min,SRP190499,120 min,insulin,2
SRR8843745,RNA-Seq,101,1455695628,PRJNA530759,SAMN11333494,881619667,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631529,GSM3704140,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704140,T_140min,SRP190499,140 min,insulin,2
SRR8843746,RNA-Seq,101,1502075737,PRJNA530759,SAMN11333493,913107489,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631530,GSM3704141,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704141,T_160min,SRP190499,160 min,insulin,2
SRR8843747,RNA-Seq,101,1439708439,PRJNA530759,SAMN11333492,874044595,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631531,GSM3704142,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,2,GSM3704142,T_180min,SRP190499,180 min,insulin,2
SRR8843748,RNA-Seq,101,1965035699,PRJNA530759,SAMN11333491,1191711313,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631532,GSM3704143,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704143,T_0min,SRP190499,baseline control,baseline control,3
SRR8843749,RNA-Seq,101,2046721166,PRJNA530759,SAMN11333490,1260097480,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631533,GSM3704144,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704144,T_20min,SRP190499,20 min,insulin,3
SRR8843750,RNA-Seq,101,794382776,PRJNA530759,SAMN11333489,488089200,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631534,GSM3704145,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704145,T_40min,SRP190499,40 min,insulin,3
SRR8843751,RNA-Seq,101,2684188928,PRJNA530759,SAMN11333488,1646906677,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631535,GSM3704146,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704146,T_60min,SRP190499,60 min,insulin,3
SRR8843752,RNA-Seq,101,1445734402,PRJNA530759,SAMN11333487,890910675,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631536,GSM3704147,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704147,T_80min,SRP190499,80 min,insulin,3
SRR8843753,RNA-Seq,101,1270323763,PRJNA530759,SAMN11333486,783063407,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631537,GSM3704148,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704148,T_100min,SRP190499,100 min,insulin,3
SRR8843754,RNA-Seq,101,1872644636,PRJNA530759,SAMN11333485,1158950467,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631538,GSM3704149,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704149,T_120min,SRP190499,120 min,insulin,3
SRR8843755,RNA-Seq,101,1946777424,PRJNA530759,SAMN11333484,1197007297,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631509,GSM3704150,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704150,T_140min,SRP190499,140 min,insulin,3
SRR8843756,RNA-Seq,101,1845303734,PRJNA530759,SAMN11333483,1135585190,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631510,GSM3704151,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704151,T_160min,SRP190499,160 min,insulin,3
SRR8843757,RNA-Seq,101,1396510335,PRJNA530759,SAMN11333482,861313088,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631511,GSM3704152,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,3,GSM3704152,T_180min,SRP190499,180 min,insulin,3
SRR8844339,RNA-Seq,101,1339853981,PRJNA530759,SAMN11333481,849811585,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631512,GSM3704123,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704123,T_0min,SRP190499,baseline control,baseline control,1
SRR8843732,RNA-Seq,101,2024965665,PRJNA530759,SAMN11333566,1256792410,S2R+ cells,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX5631516,GSM3704127,Illumina HiSeq 4000,SINGLE,cDNA,TRANSCRIPTOMIC,Drosophila melanogaster,ILLUMINA,2019-04-04T00:00:00Z,1,GSM3704127,T_80min,SRP190499,80 min,insulin,1

"ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","geneID","Count"
"GO:0002429","immune response-activating cell surface receptor signaling pathway","36/178","473/18670",2.09762632839356e-22,5.84188932457607e-19,4.89961349758454e-19,"HLA-DRA/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1/EZR/CD79A/IGHM/PTPRC/ELF1/MEF2C/TRBC2/NCR3/LYN/IGHG2/IGKV3-20/PDE4B/IGHV4-34/THEMIS2/PRNP/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",36
"GO:0002455","humoral immune response mediated by circulating immunoglobulin","22/178","150/18670",4.30534019475928e-20,5.9951862212023e-17,5.02818415377413e-17,"HLA-DQB1/CD55/IGHM/PTPRC/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",22
"GO:0002460","adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","30/178","361/18670",8.11957171444694e-20,7.53766907491158e-17,6.32187004714308e-17,"HLA-B/HLA-DQB1/CD74/HLA-C/B2M/HLA-E/CD55/LY9/IGHM/PTPRC/MEF2C/TRBC2/HLA-F/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",30
"GO:0002449","lymphocyte mediated immunity","29/178","352/18670",4.49606427191979e-19,3.13038474932415e-16,2.62546489983948e-16,"HLA-B/HLA-DQB1/CD74/HLA-C/B2M/HLA-E/CD55/IGHM/PTPRC/TRBC2/HLA-F/NCR3/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",29
"GO:0016064","immunoglobulin mediated immune response","24/178","218/18670",7.76630281120399e-19,4.32583066584062e-16,3.62808967117087e-16,"HLA-DQB1/CD74/HLA-E/CD55/IGHM/PTPRC/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",24
"GO:0019724","B cell mediated immunity","24/178","221/18670",1.07217983548647e-18,4.97670140304968e-16,4.17397728937626e-16,"HLA-DQB1/CD74/HLA-E/CD55/IGHM/PTPRC/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",24
"GO:0006958","complement activation, classical pathway","20/178","137/18670",2.57757133164006e-18,1.0255051655168e-15,8.60094854873578e-16,"CD55/IGHM/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",20
"GO:0050851","antigen receptor-mediated signaling pathway","27/178","316/18670",3.26829778379737e-18,1.13777616598446e-15,9.54256945032417e-16,"HLA-DRA/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1/EZR/CD79A/IGHM/PTPRC/ELF1/MEF2C/TRBC2/LYN/IGHG2/PDE4B/IGHV4-34/THEMIS2/PRNP/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",27
"GO:0006909","phagocytosis","28/178","369/18670",1.68884105658854e-17,5.2260248251101e-15,4.38308573633915e-15,"IGHM/PTPRC/TRBC2/IL2RG/RAB31/LYN/PLD4/IGHG2/NCF4/IGKV3-20/ITGB2/IGHV4-34/ITGB1/MYH9/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",28
"GO:0006956","complement activation","20/178","175/18670",3.51816171526709e-16,9.79808037701883e-14,8.21768510123965e-14,"CD55/IGHM/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",20
"GO:0002920","regulation of humoral immune response","18/178","134/18670",6.2398900584657e-16,1.49453335159135e-13,1.25347047422515e-13,"CD55/PTPRC/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0050900","leukocyte migration","30/178","499/18670",6.43964101224279e-16,1.49453335159135e-13,1.25347047422515e-13,"CD74/DUSP1/CXCR4/GPR183/IGHM/GPSM3/CD99/SELL/SELENOK/LYN/IGKV3-20/PDE4B/ITGB2/ITGA4/IGHV4-34/ITGB1/MYH9/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",30
"GO:0030449","regulation of complement activation","17/178","115/18670",7.94677425130764e-16,1.70244356076091e-13,1.42784551122685e-13,"CD55/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",17
"GO:2000257","regulation of protein activation cascade","17/178","116/18670",9.23528732527124e-16,1.8371625143486e-13,1.54083478005841e-13,"CD55/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",17
"GO:0002433","immune response-regulating cell surface receptor signaling pathway involved in phagocytosis","18/178","139/18670",1.21145397214055e-15,2.10868707025714e-13,1.76856339748676e-13,"PTPRC/LYN/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0038096","Fc-gamma receptor signaling pathway involved in phagocytosis","18/178","139/18670",1.21145397214055e-15,2.10868707025714e-13,1.76856339748676e-13,"PTPRC/LYN/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0038094","Fc-gamma receptor signaling pathway","18/178","142/18670",1.78069385887148e-15,2.91719552762181e-13,2.44666233612125e-13,"PTPRC/LYN/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0002431","Fc receptor mediated stimulatory signaling pathway","18/178","145/18670",2.59360698997922e-15,4.01288637060674e-13,3.36562217003737e-13,"PTPRC/LYN/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0072376","protein activation cascade","20/178","198/18670",3.94863780650285e-15,5.78787173216338e-13,4.8543087493794e-13,"CD55/IGHM/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",20
"GO:0002697","regulation of immune effector process","28/178","458/18670",4.35785548881237e-15,6.06831376817123e-13,5.08951648930245e-13,"HLA-B/CD74/HLA-C/B2M/HLA-E/CD55/PTPRC/HLA-F/NCR3/SELENOK/LYN/IGHG2/IGKV3-20/ITGB2/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",28
"GO:0006959","humoral immune response","25/178","356/18670",6.24583832473035e-15,8.28317130208287e-13,6.94712543487551e-13,"HLA-DQB1/HLA-E/CD55/GPR183/IGHM/PTPRC/MEF2C/TRBC2/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGHV1-3/IGLV1-44",25
"GO:0070613","regulation of protein processing","19/178","180/18670",8.81863309514318e-15,1.11635878045335e-12,9.36294107087211e-13,"CD55/IGHG2/IGKV3-20/IGHV4-34/MYH9/PRNP/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",19
"GO:1903317","regulation of protein maturation","19/178","182/18670",1.08231074219819e-14,1.31053713783564e-12,1.09915219081821e-12,"CD55/IGHG2/IGKV3-20/IGHV4-34/MYH9/PRNP/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",19
"GO:0002673","regulation of acute inflammatory response","18/178","159/18670",1.34395802652467e-14,1.5216879853283e-12,1.27624516278692e-12,"HLA-E/CD55/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0051251","positive regulation of lymphocyte activation","24/178","334/18670",1.36596767085126e-14,1.5216879853283e-12,1.27624516278692e-12,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/IGHM/PTPRC/CD24/MEF2C/MAP3K8/TRBC2/HLA-F/SELENOK/LYN/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",24
"GO:0051249","regulation of lymphocyte activation","28/178","485/18670",1.83407931504078e-14,1.96458111245714e-12,1.64770121460546e-12,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/BANK1/ZFP36L2/GPR183/IGHM/PTPRC/CD24/MEF2C/MAP3K8/TRBC2/HLA-F/SELENOK/LYN/IGHG2/IGHV4-34/PRNP/IGHV3-30/IGHV4-59/IRF1/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",28
"GO:0002696","positive regulation of leukocyte activation","25/178","380/18670",2.78262694717331e-14,2.87022816588061e-12,2.40727064162868e-12,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/IGHM/PTPRC/CD24/MEF2C/MAP3K8/TRBC2/HLA-F/SELENOK/LYN/IGHG2/ITGB2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",25
"GO:0006898","receptor-mediated endocytosis","23/178","316/18670",3.84591689713686e-14,3.79046153671662e-12,3.17907366530253e-12,"B2M/EZR/SNX9/RAB31/SDCBP/IGKV3-20/ITGB2/ITGA4/IGHV4-34/ITGB1/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",23
"GO:0038095","Fc-epsilon receptor signaling pathway","18/178","169/18670",3.94697969711964e-14,3.79046153671662e-12,3.17907366530253e-12,"CALM1/FOS/LYN/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0050867","positive regulation of cell activation","25/178","394/18670",6.3263151841161e-14,5.87292926258778e-12,4.92564680475566e-12,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/IGHM/PTPRC/CD24/MEF2C/MAP3K8/TRBC2/HLA-F/SELENOK/LYN/IGHG2/ITGB2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",25
"GO:0050853","B cell receptor signaling pathway","16/178","129/18670",9.8600541463007e-14,8.85814541853143e-12,7.42935828544694e-12,"CD79A/IGHM/PTPRC/ELF1/MEF2C/TRBC2/LYN/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",16
"GO:0038093","Fc receptor signaling pathway","20/178","241/18670",1.69972803537158e-13,1.473336154551e-11,1.2356923091557e-11,"CALM1/FOS/PTPRC/LYN/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",20
"GO:0050864","regulation of B cell activation","18/178","184/18670",1.74578431239437e-13,1.473336154551e-11,1.2356923091557e-11,"CD74/BANK1/ZFP36L2/GPR183/IGHM/PTPRC/MEF2C/TRBC2/LYN/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",18
"GO:0042113","B cell activation","22/178","310/18670",2.39622132584689e-13,1.96278717425988e-11,1.64619663221494e-11,"CD74/KLF6/BANK1/ZFP36L2/CD79A/GPR183/IGHM/PTPRC/MEF2C/TRBC2/LYN/IGHG2/ITGA4/IGHV4-34/ITGB1/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",22
"GO:0099024","plasma membrane invagination","15/178","127/18670",1.24357710138096e-12,9.89532064955991e-11,8.29924086605818e-11,"IGHM/SNX9/TRBC2/RAB31/IGHG2/ITGB2/IGHV4-34/MYH9/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",15
"GO:0010324","membrane invagination","15/178","135/18670",3.0689175131054e-12,2.37414868722182e-10,1.9912070063102e-10,"IGHM/SNX9/TRBC2/RAB31/IGHG2/ITGB2/IGHV4-34/MYH9/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",15
"GO:0060333","interferon-gamma-mediated signaling pathway","13/178","91/18670",3.4734018994747e-12,2.61443899730731e-10,2.1927393499102e-10,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/HLA-F/IRF1",13
"GO:0002526","acute inflammatory response","18/178","220/18670",3.74506196430366e-12,2.74473620278571e-10,2.30202008276727e-10,"HLA-E/CD55/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",18
"GO:0050871","positive regulation of B cell activation","15/178","142/18670",6.44411461688527e-12,4.60175877128859e-10,3.85951156136799e-10,"CD74/GPR183/IGHM/PTPRC/MEF2C/TRBC2/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",15
"GO:0006911","phagocytosis, engulfment","14/178","118/18670",6.74900259462024e-12,4.69899305650434e-10,3.94106230459535e-10,"IGHM/TRBC2/RAB31/IGHG2/ITGB2/IGHV4-34/MYH9/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",14
"GO:0002478","antigen processing and presentation of exogenous peptide antigen","16/178","175/18670",1.15574701921505e-11,7.85062304515586e-10,6.58434566274245e-10,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",16
"GO:0019884","antigen processing and presentation of exogenous antigen","16/178","182/18670",2.1015008142397e-11,1.39349518277561e-09,1.16872940019997e-09,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",16
"GO:0048002","antigen processing and presentation of peptide antigen","16/178","189/18670",3.72373768601258e-11,2.41176964082443e-09,2.02275983482544e-09,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",16
"GO:0050727","regulation of inflammatory response","24/178","485/18670",4.07505131325101e-11,2.57932225168274e-09,2.16328680959426e-09,"HLA-E/CD55/TMSB4X/GPSM3/PTPRC/ACP5/LYN/PER1/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",24
"GO:0034341","response to interferon-gamma","16/178","199/18670",8.09309654729286e-11,5.00872752982458e-09,4.20083771659482e-09,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/VIM/IFITM2/IFITM1/HLA-F/IRF1",16
"GO:0016485","protein processing","19/178","328/18670",3.69265313092012e-10,2.23566064556794e-08,1.87505658981962e-08,"CD55/IGHG2/IGKV3-20/IGHV4-34/MYH9/PRNP/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",19
"GO:0006910","phagocytosis, recognition","11/178","84/18670",4.40788258414128e-10,2.61190489294329e-08,2.19061398750493e-08,"IGHM/TRBC2/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",11
"GO:0019882","antigen processing and presentation","16/178","226/18670",5.35185949953676e-10,3.10519348046039e-08,2.60433689242809e-08,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",16
"GO:0019883","antigen processing and presentation of endogenous antigen","7/178","22/18670",9.61556394636683e-10,5.46517256951666e-08,4.58365980601246e-08,"HLA-B/CD74/HLA-C/B2M/HLA-E/TAP1/HLA-F",7
"GO:0071346","cellular response to interferon-gamma","14/178","180/18670",1.98506274276139e-09,1.10567994771809e-07,9.27337731828952e-08,"HLA-DRA/HLA-B/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-C/HLA-DPB1/HLA-DPA1/B2M/HLA-E/VIM/HLA-F/IRF1",14
"GO:0002483","antigen processing and presentation of endogenous peptide antigen","6/178","15/18670",3.2169477891551e-09,1.7229229986148e-07,1.44502168909619e-07,"HLA-B/HLA-C/B2M/HLA-E/TAP1/HLA-F",6
"GO:0019885","antigen processing and presentation of endogenous peptide antigen via MHC class I","6/178","15/18670",3.2169477891551e-09,1.7229229986148e-07,1.44502168909619e-07,"HLA-B/HLA-C/B2M/HLA-E/TAP1/HLA-F",6
"GO:0043312","neutrophil degranulation","21/178","485/18670",7.93771036215784e-09,4.17104214313388e-07,3.49826798284573e-07,"B2M/FTH1/CD55/YPEL5/SLC2A3/RNASET2/ADGRE5/COTL1/PTPRC/SELL/GMFG/CMTM6/PLAC8/ALOX5/RAB31/SDCBP/SYNGR1/GLIPR1/ITGB2/CYBB/HSPA1A",21
"GO:0051604","protein maturation","19/178","397/18670",8.66021771809104e-09,4.46642710090436e-07,3.74600840476492e-07,"CD55/IGHG2/IGKV3-20/IGHV4-34/MYH9/PRNP/IGHV3-30/IGLV2-14/IGHV4-59/IGHV3-23/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGHV3-48/IGHV3-7/IGLV1-51/IGHV4-39/IGLV1-44",19
"GO:0002283","neutrophil activation involved in immune response","21/178","488/18670",8.84012114010395e-09,4.47631588639809e-07,3.75430216457237e-07,"B2M/FTH1/CD55/YPEL5/SLC2A3/RNASET2/ADGRE5/COTL1/PTPRC/SELL/GMFG/CMTM6/PLAC8/ALOX5/RAB31/SDCBP/SYNGR1/GLIPR1/ITGB2/CYBB/HSPA1A",21
"GO:0042119","neutrophil activation","21/178","498/18670",1.25822304170994e-08,6.25741280564677e-07,5.24811452923752e-07,"B2M/FTH1/CD55/YPEL5/SLC2A3/RNASET2/ADGRE5/COTL1/PTPRC/SELL/GMFG/CMTM6/PLAC8/ALOX5/RAB31/SDCBP/SYNGR1/GLIPR1/ITGB2/CYBB/HSPA1A",21
"GO:0002446","neutrophil mediated immunity","21/178","499/18670",1.30278780427689e-08,6.36537549984413e-07,5.33866322749848e-07,"B2M/FTH1/CD55/YPEL5/SLC2A3/RNASET2/ADGRE5/COTL1/PTPRC/SELL/GMFG/CMTM6/PLAC8/ALOX5/RAB31/SDCBP/SYNGR1/GLIPR1/ITGB2/CYBB/HSPA1A",21
"GO:0008037","cell recognition","14/178","215/18670",1.95041491465852e-08,9.36535437469653e-07,7.85475625340701e-07,"YWHAZ/CXCR4/IGHM/TRBC2/NCR3/IGHG2/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",14
"GO:0007159","leukocyte cell-cell adhesion","17/178","337/18670",2.55299055388272e-08,1.20509808348532e-06,1.01072007833466e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/EZR/PTPRC/CD24/SELL/MAP3K8/SELENOK/LYN/ITGB2/ITGA4/ITGB1/PRNP/IRF1",17
"GO:0046651","lymphocyte proliferation","15/178","272/18670",5.49082662613507e-08,2.5486586922977e-06,2.13756917252522e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/CD79A/GPR183/PTPRC/CD24/MEF2C/CCND3/SELENOK/LYN/PRNP/IRF1",15
"GO:0032943","mononuclear cell proliferation","15/178","274/18670",6.04592048867576e-08,2.7603096001577e-06,2.31508154691484e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/CD79A/GPR183/PTPRC/CD24/MEF2C/CCND3/SELENOK/LYN/PRNP/IRF1",15
"GO:0050852","T cell receptor signaling pathway","13/178","202/18670",7.31750666109516e-08,3.28697678244355e-06,2.75679919880648e-06,"HLA-DRA/HLA-DRB1/HLA-DQB1/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1/EZR/PTPRC/ELF1/PDE4B/THEMIS2/PRNP",13
"GO:0070665","positive regulation of leukocyte proliferation","11/178","139/18670",9.42873738713476e-08,4.1681005751064e-06,3.49580087920669e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK/LYN",11
"GO:0050670","regulation of lymphocyte proliferation","13/178","208/18670",1.03077639897913e-07,4.48548792368264e-06,3.76199478508996e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK/LYN/PRNP/IRF1",13
"GO:0002440","production of molecular mediator of immune response","15/178","286/18670",1.05903859061828e-07,4.53757303826447e-06,3.80567875721775e-06,"HLA-DQB1/CD74/B2M/HLA-E/CD55/PTPRC/HLA-F/IGKV3-20/IGLV2-14/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGLV1-51/IGLV1-44",15
"GO:0032944","regulation of mononuclear cell proliferation","13/178","209/18670",1.09011359711922e-07,4.59994904238943e-06,3.85799373525924e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK/LYN/PRNP/IRF1",13
"GO:0001916","positive regulation of T cell mediated cytotoxicity","6/178","26/18670",1.35637761702329e-07,5.63807710956697e-06,4.72867546296101e-06,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0070661","leukocyte proliferation","15/178","298/18670",1.80420658912854e-07,7.38928728047498e-06,6.19742170476197e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/CD79A/GPR183/PTPRC/CD24/MEF2C/CCND3/SELENOK/LYN/PRNP/IRF1",15
"GO:0070663","regulation of leukocyte proliferation","13/178","222/18670",2.19511459904911e-07,8.85999153384313e-06,7.4309066289702e-06,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK/LYN/PRNP/IRF1",13
"GO:0002475","antigen processing and presentation via MHC class Ib","5/178","16/18670",2.98729269883961e-07,1.18851573803833e-05,9.96812405823321e-06,"HLA-B/HLA-C/B2M/HLA-E/HLA-F",5
"GO:0050671","positive regulation of lymphocyte proliferation","10/178","130/18670",4.78448469941626e-07,1.87673097012314e-05,1.57402098561967e-05,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK",10
"GO:0042110","T cell activation","18/178","464/18670",5.02287188291959e-07,1.94287474915709e-05,1.62949600997055e-05,"CD74/HLA-DPB1/HLA-DPA1/B2M/HLA-E/CD55/LY9/ZFP36L2/GPR183/PTPRC/CD24/MAP3K8/CCND3/SELENOK/LYN/MYH9/PRNP/IRF1",18
"GO:0032946","positive regulation of mononuclear cell proliferation","10/178","131/18670",5.13763056039294e-07,1.96004124804032e-05,1.64389361406084e-05,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/GPR183/PTPRC/CD24/MEF2C/SELENOK",10
"GO:0002479","antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent","8/178","75/18670",5.70927711506173e-07,2.14869415749283e-05,1.80211748482532e-05,"HLA-B/HLA-C/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",8
"GO:0001914","regulation of T cell mediated cytotoxicity","6/178","33/18670",6.17373634152896e-07,2.29251409482109e-05,1.92273978131267e-05,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0042742","defense response to bacterium","15/178","330/18670",6.62715257977075e-07,2.42850262298178e-05,2.03679384688522e-05,"HLA-E/IGHM/ACP5/TRBC2/PLAC8/IGHG2/IGKV3-20/IGHV4-34/IGHV3-30/IGHV4-59/IGHV3-23/IGHV3-48/IGHV3-7/IGHV4-39/IGHV1-3",15
"GO:0042590","antigen processing and presentation of exogenous peptide antigen via MHC class I","8/178","79/18670",8.54725550894041e-07,3.09144241459728e-05,2.59280382424317e-05,"HLA-B/HLA-C/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",8
"GO:0001912","positive regulation of leukocyte mediated cytotoxicity","7/178","56/18670",9.95243008592151e-07,3.55352792170403e-05,2.98035659388122e-05,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:1903039","positive regulation of leukocyte cell-cell adhesion","12/178","218/18670",1.25324174017726e-06,4.37086481691991e-05,3.66585997495806e-05,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/MAP3K8/SELENOK/LYN/ITGB2/ITGA4",12
"GO:0045730","respiratory burst","6/178","37/18670",1.25554465117987e-06,4.37086481691991e-05,3.66585997495806e-05,"CD55/CD52/CD24/SELENOK/NCF4/CYBB",6
"GO:1903037","regulation of leukocyte cell-cell adhesion","14/178","304/18670",1.35827175712739e-06,4.67010721432071e-05,3.91683564530952e-05,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/MAP3K8/SELENOK/LYN/ITGB2/ITGA4/PRNP/IRF1",14
"GO:0022407","regulation of cell-cell adhesion","16/178","403/18670",1.65407779747317e-06,5.61781300727167e-05,4.71167988779584e-05,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/FXYD5/PTPRC/CD24/MAP3K8/SELENOK/LYN/MYADM/ITGB2/ITGA4/PRNP/IRF1",16
"GO:0002377","immunoglobulin production","11/178","193/18670",2.51148263938482e-06,8.42708331408039e-05,7.06782495471771e-05,"HLA-DQB1/HLA-E/PTPRC/IGKV3-20/IGLV2-14/IGKV3-15/IGKV4-1/IGKV1-17/IGKV1-5/IGLV1-51/IGLV1-44",11
"GO:0060337","type I interferon signaling pathway","8/178","95/18670",3.4986813528388e-06,0.000114633265501836,9.61433303027778e-05,"HLA-B/HLA-C/HLA-E/ISG20/IFITM2/IFITM1/HLA-F/IRF1",8
"GO:0071357","cellular response to type I interferon","8/178","95/18670",3.4986813528388e-06,0.000114633265501836,9.61433303027778e-05,"HLA-B/HLA-C/HLA-E/ISG20/IFITM2/IFITM1/HLA-F/IRF1",8
"GO:0031343","positive regulation of cell killing","7/178","68/18670",3.77891001146941e-06,0.000121195572019879,0.000101647160280492,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:0002474","antigen processing and presentation of peptide antigen via MHC class I","8/178","96/18670",3.78600171121345e-06,0.000121195572019879,0.000101647160280492,"HLA-B/HLA-C/B2M/HLA-E/TAP1/HLA-F/NCF4/CYBB",8
"GO:0019886","antigen processing and presentation of exogenous peptide antigen via MHC class II","8/178","98/18670",4.42102058113098e-06,0.000138343172117413,0.000116028913891539,"HLA-DRA/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1",8
"GO:0031341","regulation of cell killing","8/178","98/18670",4.42102058113098e-06,0.000138343172117413,0.000116028913891539,"HLA-B/HLA-C/B2M/HLA-E/CD55/PTPRC/HLA-F/NCR3",8
"GO:0034340","response to type I interferon","8/178","99/18670",4.77095062901144e-06,0.000147634416686632,0.000123821513985689,"HLA-B/HLA-C/HLA-E/ISG20/IFITM2/IFITM1/HLA-F/IRF1",8
"GO:0002495","antigen processing and presentation of peptide antigen via MHC class II","8/178","101/18670",5.54157761533324e-06,0.000169596633612122,0.000142241303972521,"HLA-DRA/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1",8
"GO:0002504","antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","8/178","102/18670",5.96478860130524e-06,0.000180564524506903,0.000151440113344352,"HLA-DRA/HLA-DRB1/HLA-DQB1/CD74/HLA-DQA1/HLA-DRB5/HLA-DPB1/HLA-DPA1",8
"GO:0002711","positive regulation of T cell mediated immunity","6/178","48/18670",6.07619794630135e-06,0.0001819592610801,0.000152609883903143,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0022409","positive regulation of cell-cell adhesion","12/178","255/18670",6.3453848847376e-06,0.000187998903233981,0.000157675353406861,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/MAP3K8/SELENOK/LYN/ITGB2/ITGA4",12
"GO:0001913","T cell mediated cytotoxicity","6/178","49/18670",6.86963295143123e-06,0.000201388713365642,0.000168905435116077,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0045785","positive regulation of cell adhesion","15/178","403/18670",7.71089723225192e-06,0.000223696341581475,0.000187614922789112,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CIB1/CD24/MAP3K8/SELENOK/LYN/MYADM/SPOCK2/ITGB2/ITGA4",15
"GO:0001910","regulation of leukocyte mediated cytotoxicity","7/178","78/18670",9.50612304688893e-06,0.000272933532841089,0.000228910331427526,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:0001819","positive regulation of cytokine production","16/178","464/18670",9.92150897139187e-06,0.000281953086584963,0.000236475063453475,"CD74/HLA-DPB1/HLA-DPA1/B2M/HLA-E/LY9/LTB/GPSM3/PTPRC/HLA-F/SELENOK/LRRFIP1/PDE4B/CYBB/IRF1/HSPA1A",16
"GO:0042098","T cell proliferation","10/178","184/18670",1.10319970581645e-05,0.000310344563706952,0.000260287096991676,"HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/CCND3/SELENOK/PRNP/IRF1",10
"GO:0001776","leukocyte homeostasis","7/178","86/18670",1.81358653049748e-05,0.00050508384874355,0.000423615632755149,"CD74/TSC22D3/GPR183/MEF2C/LYN/PDE4B/SLC39A3",7
"GO:0042129","regulation of T cell proliferation","9/178","156/18670",1.90713781197583e-05,0.00052587908973789,0.000441056675849335,"HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/SELENOK/PRNP/IRF1",9
"GO:0050870","positive regulation of T cell activation","10/178","202/18670",2.47669545610224e-05,0.000675591161910771,0.000566620726931872,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/MAP3K8/SELENOK/LYN",10
"GO:0048872","homeostasis of number of cells","11/178","246/18670",2.49859567959818e-05,0.000675591161910771,0.000566620726931872,"CD74/KLF2/TSC22D3/B2M/GPR183/ZFP36/MEF2C/LYN/PDE4B/SLC39A3/HSPA1A",11
"GO:0042102","positive regulation of T cell proliferation","7/178","95/18670",3.47090653107859e-05,0.000929468720101334,0.000779548744176456,"HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/SELENOK",7
"GO:0002683","negative regulation of immune system process","15/178","463/18670",3.89977501133248e-05,0.00103436889586295,0.000867528897257823,"CD74/TSC22D3/HLA-E/CD55/DUSP1/EZR/BANK1/ZFP36/PTPRC/ELF1/CIB1/HLA-F/LYN/PRNP/IRF1",15
"GO:0002705","positive regulation of leukocyte mediated immunity","8/178","133/18670",4.14910062963851e-05,0.00109011747674936,0.00091428543169492,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3/ITGB2",8
"GO:0002699","positive regulation of immune effector process","10/178","216/18670",4.38220524884769e-05,0.00114060202037765,0.000956626999231976,"HLA-B/CD74/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3/LYN/ITGB2",10
"GO:0050863","regulation of T cell activation","12/178","314/18670",4.98942968249358e-05,0.00128662608016154,0.0010790979011163,"CD74/HLA-DPB1/HLA-DPA1/HLA-E/CD55/PTPRC/CD24/MAP3K8/SELENOK/LYN/PRNP/IRF1",12
"GO:0002709","regulation of T cell mediated immunity","6/178","70/18670",5.45913510020104e-05,0.0013948340600055,0.00116985232132749,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0032703","negative regulation of interleukin-2 production","4/178","23/18670",6.13875595393918e-05,0.00155422139379278,0.00130353104897522,"EZR/ZFP36/PTPRC/PRNP",4
"GO:0002708","positive regulation of lymphocyte mediated immunity","7/178","105/18670",6.60083821557161e-05,0.00165615625498801,0.00138902418211033,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:0002456","T cell mediated immunity","7/178","106/18670",7.01140885399931e-05,0.00174346193378465,0.00146224776757749,"HLA-B/HLA-C/B2M/HLA-E/CD55/PTPRC/HLA-F",7
"GO:0001909","leukocyte mediated cytotoxicity","7/178","107/18670",7.44260489460244e-05,0.00183430571959892,0.00153843877607106,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:0051592","response to calcium ion","8/178","148/18670",8.83764988319659e-05,0.00215902236181601,0.00181077978677869,"TXNIP/DUSP1/CALM1/JUNB/FOS/MEF2C/FOSB/RASGRP2",8
"GO:0002237","response to molecule of bacterial origin","12/178","343/18670",0.0001155617413926,0.00279860391111644,0.0023471991226561,"B2M/CD55/VIM/JUNB/FOS/ZFP36/ACP5/CD24/MEF2C/LYN/LY86/PDE4B",12
"GO:0001818","negative regulation of cytokine production","11/178","296/18670",0.000131969978444854,0.00316841715490446,0.00265736281460191,"KLF2/EZR/TMSB4X/BANK1/ZFP36/PTPRC/ACP5/CD24/HLA-F/ATP2B1/PRNP",11
"GO:0002703","regulation of leukocyte mediated immunity","9/178","201/18670",0.000136615954073745,0.00325192677004599,0.00272740262788701,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3/LYN/ITGB2",9
"GO:0002819","regulation of adaptive immune response","8/178","160/18670",0.000151918540754063,0.00358553505084801,0.0030072010877187,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/MEF2C/HLA-F/IRF1",8
"GO:0046718","viral entry into host cell","7/178","121/18670",0.000161187739420962,0.00374456154510631,0.00314057717796122,"CD74/CD55/CXCR4/IFITM2/IFITM1/ITGB1/HSPA1A",7
"GO:0032663","regulation of interleukin-2 production","5/178","54/18670",0.000161345560291834,0.00374456154510631,0.00314057717796122,"EZR/ZFP36/PTPRC/PDE4B/PRNP",5
"GO:1905477","positive regulation of protein localization to membrane","7/178","122/18670",0.000169642785495686,0.00390458807938418,0.00327479200534952,"EZR/YWHAZ/CIB1/PPP3CC/ITGB2/ITGB1/PRNP",7
"GO:0046640","regulation of alpha-beta T cell proliferation","4/178","30/18670",0.000180344811795319,0.00411688771188495,0.00345284846741858,"HLA-E/CD55/PTPRC/IRF1",4
"GO:0030099","myeloid cell differentiation","13/178","416/18670",0.000184457404853092,0.00417653554890944,0.00350287532194276,"CD74/KLF2/B2M/GPR183/JUNB/FOS/ZFP36/CIB1/EVI2B/MEF2C/LYN/MYH9/HSPA1A",13
"GO:0010038","response to metal ion","12/178","364/18670",0.000200686405326318,0.004507351926079,0.00378033220219949,"B2M/TXNIP/DUSP1/CALM1/JUNB/FOS/CRIP1/MEF2C/FOSB/RASGRP2/PRNP/CYBB",12
"GO:0001906","cell killing","8/178","168/18670",0.00021227869075228,0.0047295692299608,0.00396670665077313,"HLA-B/HLA-C/B2M/HLA-E/CD55/PTPRC/HLA-F/NCR3",8
"GO:0051385","response to mineralocorticoid","4/178","32/18670",0.000233152210549974,0.00515340401890221,0.00432217840610186,"FOS/FOSB/ATP2B1/CYBB",4
"GO:0030183","B cell differentiation","7/178","131/18670",0.000263102072856609,0.00572987440881033,0.0048056661865823,"KLF6/ZFP36L2/CD79A/GPR183/PTPRC/ITGA4/ITGB1",7
"GO:0046633","alpha-beta T cell proliferation","4/178","33/18670",0.000263347908196669,0.00572987440881033,0.0048056661865823,"HLA-E/CD55/PTPRC/IRF1",4
"GO:0030888","regulation of B cell proliferation","5/178","61/18670",0.000287632191348691,0.00611492864813821,0.00512861255606867,"CD74/GPR183/PTPRC/MEF2C/LYN",5
"GO:0034113","heterotypic cell-cell adhesion","5/178","61/18670",0.000287632191348691,0.00611492864813821,0.00512861255606867,"PTPRC/MYADM/ITGB2/ITGA4/ITGB1",5
"GO:0045123","cellular extravasation","5/178","61/18670",0.000287632191348691,0.00611492864813821,0.00512861255606867,"CD99/SELL/ITGB2/ITGA4/ITGB1",5
"GO:0042100","B cell proliferation","6/178","95/18670",0.000297367240417554,0.00618718838711861,0.00518921705792921,"CD74/CD79A/GPR183/PTPRC/MEF2C/LYN",6
"GO:0030260","entry into host cell","7/178","134/18670",0.000302139181561268,0.00618718838711861,0.00518921705792921,"CD74/CD55/CXCR4/IFITM2/IFITM1/ITGB1/HSPA1A",7
"GO:0044409","entry into host","7/178","134/18670",0.000302139181561268,0.00618718838711861,0.00518921705792921,"CD74/CD55/CXCR4/IFITM2/IFITM1/ITGB1/HSPA1A",7
"GO:0051806","entry into cell of other organism involved in symbiotic interaction","7/178","134/18670",0.000302139181561268,0.00618718838711861,0.00518921705792921,"CD74/CD55/CXCR4/IFITM2/IFITM1/ITGB1/HSPA1A",7
"GO:0051828","entry into other organism involved in symbiotic interaction","7/178","134/18670",0.000302139181561268,0.00618718838711861,0.00518921705792921,"CD74/CD55/CXCR4/IFITM2/IFITM1/ITGB1/HSPA1A",7
"GO:0002260","lymphocyte homeostasis","5/178","62/18670",0.00031047196328188,0.00626568418652199,0.00525505176599917,"CD74/TSC22D3/MEF2C/LYN/SLC39A3",5
"GO:0032623","interleukin-2 production","5/178","62/18670",0.00031047196328188,0.00626568418652199,0.00525505176599917,"EZR/ZFP36/PTPRC/PDE4B/PRNP",5
"GO:0051591","response to cAMP","6/178","97/18670",0.000332847774898508,0.00666892843951327,0.00559325416508738,"DUSP1/EZR/JUNB/FOS/FOSB/PER1",6
"GO:0072160","nephron tubule epithelial cell differentiation","3/178","15/18670",0.00035634403713338,0.00708870102440331,0.0059453189353306,"CD24/MEF2C/MTSS1",3
"GO:0050854","regulation of antigen receptor-mediated signaling pathway","5/178","65/18670",0.000387287302934551,0.00764961091257252,0.00641575606727711,"EZR/PTPRC/ELF1/LYN/PRNP",5
"GO:0002824","positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","6/178","100/18670",0.000392195223443621,0.00769199786824284,0.00645130615879462,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0006979","response to oxidative stress","13/178","451/18670",0.000401182377135965,0.00781323720506058,0.00655299002476781,"KLF2/TXNIP/DUSP1/BTG1/NR4A2/FOS/RHOB/SELENOK/NCF4/ARL6IP5/PRNP/CYBB/HSPA1A",13
"GO:0042108","positive regulation of cytokine biosynthetic process","5/178","67/18670",0.000445936167271155,0.00862452934618172,0.00723342364893782,"CD74/LTB/PTPRC/CYBB/IRF1",5
"GO:0033627","cell adhesion mediated by integrin","5/178","68/18670",0.000477653753014151,0.00917424622168559,0.00769447316107732,"CIB1/LYN/ITGB2/ITGA4/ITGB1",5
"GO:0071248","cellular response to metal ion","8/178","190/18670",0.000485638564523696,0.00922397294384581,0.00773617914103519,"B2M/JUNB/FOS/MEF2C/FOSB/RASGRP2/PRNP/CYBB",8
"GO:0002822","regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","7/178","145/18670",0.000486866794522562,0.00922397294384581,0.00773617914103519,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/MEF2C/HLA-F",7
"GO:0002821","positive regulation of adaptive immune response","6/178","105/18670",0.000509162097412128,0.00951688886773675,0.00798184877539747,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F",6
"GO:0007009","plasma membrane organization","6/178","105/18670",0.000509162097412128,0.00951688886773675,0.00798184877539747,"CXCR4/PTPRC/SNX9/ANXA6/MTSS1/MYH9",6
"GO:0043900","regulation of multi-organism process","12/178","405/18670",0.000525734981955221,0.0097611461649686,0.00818670824532375,"CD74/CD55/ISG20/CXCR4/VPS37B/IFITM2/ZFP36/CIB1/IFITM1/SELENOK/LY86/RESF1",12
"GO:0002706","regulation of lymphocyte mediated immunity","7/178","149/18670",0.000572905366546702,0.0105664996412753,0.00886216109004623,"HLA-B/HLA-C/B2M/HLA-E/PTPRC/HLA-F/NCR3",7
"GO:0030098","lymphocyte differentiation","11/178","353/18670",0.000592364411250026,0.0108535189824429,0.00910288523936154,"CD74/B2M/KLF6/LY9/ZFP36L2/CD79A/GPR183/PTPRC/ITGA4/ITGB1/IRF1",11
"GO:0030890","positive regulation of B cell proliferation","4/178","41/18670",0.000614191518713411,0.0111798913700448,0.00937661492965297,"CD74/GPR183/PTPRC/MEF2C",4
"GO:0001911","negative regulation of leukocyte mediated cytotoxicity","3/178","18/18670",0.000625759221252792,0.0113164898129158,0.00949118053287728,"HLA-E/PTPRC/HLA-F",3
"GO:0045637","regulation of myeloid cell differentiation","9/178","251/18670",0.000698026390704607,0.0125419580523376,0.0105189851339458,"CD74/B2M/FOS/ZFP36/CIB1/EVI2B/MEF2C/LYN/HSPA1A",9
"GO:0046641","positive regulation of alpha-beta T cell proliferation","3/178","19/18670",0.000737898428766852,0.0131733790007415,0.0110485601446265,"HLA-E/CD55/PTPRC",3
"GO:0002573","myeloid leukocyte differentiation","8/178","204/18670",0.000774559886109711,0.0137398043491436,0.0115236231128223,"CD74/GPR183/JUNB/FOS/EVI2B/MEF2C/LYN/MYH9",8
"GO:0042035","regulation of cytokine biosynthetic process","6/178","114/18670",0.000786413627536816,0.0138617845106964,0.0116259283111539,"CD74/LTB/ZFP36/PTPRC/CYBB/IRF1",6
"GO:0061756","leukocyte adhesion to vascular endothelial cell","4/178","44/18670",0.000805225199058615,0.0141041017570959,0.0118291606534993,"SELL/ITGB2/ITGA4/ITGB1",4
"GO:0030220","platelet formation","3/178","20/18670",0.000862054509224814,0.0149119366968392,0.0125066947104927,"CIB1/MEF2C/MYH9",3
"GO:0050860","negative regulation of T cell receptor signaling pathway","3/178","20/18670",0.000862054509224814,0.0149119366968392,0.0125066947104927,"EZR/ELF1/PRNP",3
"GO:0050792","regulation of viral process","8/178","208/18670",0.000878557263468088,0.015103592461473,0.0126674370866516,"CD74/ISG20/CXCR4/VPS37B/IFITM2/ZFP36/IFITM1/RESF1",8
"GO:0051701","interaction with host","8/178","209/18670",0.00090623284896515,0.0154837943826254,0.0129863137995071,"CD74/CD55/CXCR4/VPS37B/IFITM2/IFITM1/ITGB1/HSPA1A",8
"GO:0031960","response to corticosteroid","7/178","162/18670",0.000938961055358788,0.0159451618242331,0.0133732643250395,"DUSP1/ZFP36L2/FOS/ZFP36/FOSB/ATP2B1/CYBB",7
"GO:0036344","platelet morphogenesis","3/178","21/18670",0.000998711261471516,0.0166551548694501,0.0139687380347009,"CIB1/MEF2C/MYH9",3
"GO:0051412","response to corticosterone","3/178","21/18670",0.000998711261471516,0.0166551548694501,0.0139687380347009,"FOS/FOSB/ATP2B1",3
"GO:0071498","cellular response to fluid shear stress","3/178","21/18670",0.000998711261471516,0.0166551548694501,0.0139687380347009,"KLF2/MEF2C/MTSS1",3
"GO:0045646","regulation of erythrocyte differentiation","4/178","47/18670",0.00103476999217938,0.0171537763584499,0.0143869336631958,"B2M/ZFP36/LYN/HSPA1A",4
"GO:0034109","homotypic cell-cell adhesion","5/178","81/18670",0.00106286991115505,0.0175153414353066,0.0146901795879978,"CLIC1/MYL12A/CD99/LYN/MYH9",5
"GO:0031342","negative regulation of cell killing","3/178","22/18670",0.00114833557789067,0.0187906065123877,0.0157597489751444,"HLA-E/PTPRC/HLA-F",3
"GO:0071241","cellular response to inorganic substance","8/178","217/18670",0.00115374998693655,0.0187906065123877,0.0157597489751444,"B2M/JUNB/FOS/MEF2C/FOSB/RASGRP2/PRNP/CYBB",8
"GO:0042089","cytokine biosynthetic process","6/178","123/18670",0.00116800178987919,0.0189121220047299,0.0158616644537449,"CD74/LTB/ZFP36/PTPRC/CYBB/IRF1",6
"GO:0071277","cellular response to calcium ion","5/178","83/18670",0.00118618139159728,0.0190954634427655,0.0160154335744106,"JUNB/FOS/MEF2C/FOSB/RASGRP2",5
"GO:1901653","cellular response to peptide","11/178","385/18670",0.00120055131947657,0.0192157208318521,0.016116293877305,"KLF2/VIM/NR4A2/VAMP2/CCND3/RAB31/KLF3/LYN/ITGA4/ATP2B1/PRNP",11
"GO:0042107","cytokine metabolic process","6/178","124/18670",0.00121785120325924,0.0193812320061542,0.0162551086919233,"CD74/LTB/ZFP36/PTPRC/CYBB/IRF1",6
"GO:0019058","viral life cycle","10/178","328/18670",0.00123414894488635,0.0195290046108436,0.0163790461046818,"CD74/CD55/ISG20/CXCR4/VPS37B/IFITM2/IFITM1/ITGB1/RESF1/HSPA1A",10
"GO:0032496","response to lipopolysaccharide","10/178","330/18670",0.00129146707362416,0.0203205412431824,0.0170429107128874,"CD55/VIM/JUNB/FOS/ZFP36/ACP5/MEF2C/LYN/LY86/PDE4B",10
"GO:0043903","regulation of symbiosis, encompassing mutualism through parasitism","8/178","222/18670",0.00133402696893876,0.0208722758904183,0.0175056525374046,"CD74/ISG20/CXCR4/VPS37B/IFITM2/ZFP36/IFITM1/RESF1",8
"GO:0090150","establishment of protein localization to membrane","10/178","332/18670",0.00135093959938587,0.0210188088507801,0.0176285502560261,"YWHAZ/VPS37B/CIB1/CD24/VAMP2/RAB31/PPP3CC/SDCBP/ITGB2/PRNP",10
"GO:0030101","natural killer cell activation","5/178","86/18670",0.00139058497867786,0.021515439808988,0.0180450764192174,"HLA-E/PTPRC/HLA-F/NCR3/ITGB2",5
"GO:0030595","leukocyte chemotaxis","8/178","224/18670",0.00141212691386171,0.0217280301387008,0.0182233766900792,"CD74/DUSP1/CXCR4/GPR183/GPSM3/LYN/PDE4B/ITGB2",8
"GO:0010959","regulation of metal ion transport","11/178","394/18670",0.00144319653080859,0.0220840787818787,0.0185219959621993,"B2M/FXYD5/SARAF/CXCR4/CALM1/VAMP2/LYN/PER1/PDE4B/ATP2B1/PRNP",11
"GO:0002695","negative regulation of leukocyte activation","7/178","175/18670",0.0014685244382786,0.0223488555224366,0.0187440651627277,"CD74/BANK1/PTPRC/HLA-F/LYN/PRNP/IRF1",7
"GO:0038066","p38MAPK cascade","4/178","53/18670",0.00162512938969825,0.0245977464690741,0.0206302180534349,"DUSP1/EZR/ZFP36/PER1",4
"GO:0050901","leukocyte tethering or rolling","3/178","25/18670",0.00167943626266082,0.0252823242784345,0.0212043759137659,"SELL/ITGA4/ITGB1",3
"GO:0002720","positive regulation of cytokine production involved in immune response","4/178","54/18670",0.00174223209605077,0.0260866472446312,0.0218789644659686,"CD74/B2M/HLA-E/HLA-F",4
"GO:0046683","response to organophosphorus","6/178","134/18670",0.0018107933902044,0.0269682331107982,0.0226183536890716,"DUSP1/EZR/JUNB/FOS/FOSB/PER1",6
"GO:0071216","cellular response to biotic stimulus","8/178","236/18670",0.00196031718007899,0.0290398050346807,0.0243557884803766,"TXNIP/CD55/VIM/ZFP36/MEF2C/LYN/LY86/PDE4B",8
"GO:1903078","positive regulation of protein localization to plasma membrane","4/178","56/18670",0.00199376854136251,0.0293790761253682,0.024640336359139,"EZR/CIB1/ITGB1/PRNP",4
"GO:1903706","regulation of hemopoiesis","12/178","475/18670",0.00205688203999329,0.0301495604283226,0.025286544303297,"CD74/B2M/ZFP36L2/FOS/ZFP36/PTPRC/CIB1/EVI2B/MEF2C/LYN/IRF1/HSPA1A",12
"GO:0046631","alpha-beta T cell activation","6/178","138/18670",0.00210103986141465,0.0306355812253393,0.0256941716862999,"HLA-E/CD55/LY9/GPR183/PTPRC/IRF1",6
"GO:1905475","regulation of protein localization to membrane","7/178","187/18670",0.00214148693739734,0.0310627141700604,0.0260524096166924,"EZR/YWHAZ/CIB1/PPP3CC/ITGB2/ITGB1/PRNP",7
"GO:0002702","positive regulation of production of molecular mediator of immune response","5/178","95/18670",0.00216006411767761,0.0311698371385085,0.0261422540339603,"CD74/B2M/HLA-E/PTPRC/HLA-F",5
"GO:0035456","response to interferon-beta","3/178","28/18670",0.00234249969874954,0.0334557008257306,0.0280594160946032,"IFITM2/IFITM1/IRF1",3
"GO:0050858","negative regulation of antigen receptor-mediated signaling pathway","3/178","28/18670",0.00234249969874954,0.0334557008257306,0.0280594160946032,"EZR/ELF1/PRNP",3
"GO:0045071","negative regulation of viral genome replication","4/178","59/18670",0.00241652831324263,0.0341625956973641,0.0286522913549848,"ISG20/IFITM2/IFITM1/RESF1",4
"GO:0070527","platelet aggregation","4/178","59/18670",0.00241652831324263,0.0341625956973641,0.0286522913549848,"CLIC1/MYL12A/LYN/MYH9",4
"GO:1901654","response to ketone","7/178","193/18670",0.00255677018288726,0.0359626513098031,0.0301620044435238,"KLF2/TXNIP/DUSP1/FOS/FOSB/ATP2B1/CYBB",7
"GO:0048525","negative regulation of viral process","5/178","99/18670",0.0025864407596163,0.0361971734448815,0.0303586989980882,"ISG20/IFITM2/ZFP36/IFITM1/RESF1",5
"GO:0060326","cell chemotaxis","9/178","304/18670",0.00261854023930196,0.0364631728322798,0.0305817936369003,"CD74/DUSP1/TMSB4X/CXCR4/GPR183/GPSM3/LYN/PDE4B/ITGB2",9
"GO:0034446","substrate adhesion-dependent cell spreading","5/178","100/18670",0.00270192736678328,0.0374371528183654,0.0313986741392621,"CIB1/PARVG/PARVB/MYADM/ITGA4",5
"GO:0051250","negative regulation of lymphocyte activation","6/178","146/18670",0.00278549061786835,0.0380335052738164,0.0318988370793153,"CD74/BANK1/HLA-F/LYN/PRNP/IRF1",6
"GO:0051384","response to glucocorticoid","6/178","146/18670",0.00278549061786835,0.0380335052738164,0.0318988370793153,"DUSP1/ZFP36L2/FOS/ZFP36/FOSB/ATP2B1",6
"GO:0002685","regulation of leukocyte migration","7/178","196/18670",0.00278635271098042,0.0380335052738164,0.0318988370793153,"CD74/DUSP1/GPSM3/CD99/SELENOK/LYN/ITGA4",7
"GO:0031532","actin cytoskeleton reorganization","5/178","101/18670",0.00282110520245299,0.0380335052738164,0.0318988370793153,"EZR/GMFG/PARVG/PARVB/MYH9",5
"GO:0001782","B cell homeostasis","3/178","30/18670",0.00286287178010421,0.0380335052738164,0.0318988370793153,"CD74/MEF2C/LYN",3
"GO:0045954","positive regulation of natural killer cell mediated cytotoxicity","3/178","30/18670",0.00286287178010421,0.0380335052738164,0.0318988370793153,"HLA-E/HLA-F/NCR3",3
"GO:0046596","regulation of viral entry into host cell","3/178","30/18670",0.00286287178010421,0.0380335052738164,0.0318988370793153,"CD74/IFITM2/IFITM1",3
"GO:0090314","positive regulation of protein targeting to membrane","3/178","30/18670",0.00286287178010421,0.0380335052738164,0.0318988370793153,"CIB1/ITGB2/PRNP",3
"GO:0002262","myeloid cell homeostasis","6/178","147/18670",0.00288153307460512,0.0380335052738164,0.0318988370793153,"KLF2/B2M/ZFP36/LYN/PDE4B/HSPA1A",6
"GO:0071236","cellular response to antibiotic","6/178","147/18670",0.00288153307460512,0.0380335052738164,0.0318988370793153,"KLF2/RHOB/CRIP1/MEF2C/ID3/CYBB",6
"GO:0035690","cellular response to drug","10/178","369/18670",0.00291886388521725,0.0383445090581606,0.0321596770670163,"KLF2/B2M/VIM/CXCR4/RHOB/CD69/MEF2C/PDE4B/PRNP/CYBB",10
"GO:0002367","cytokine production involved in immune response","5/178","102/18670",0.00294404146856271,0.0384936877462308,0.0322847937669417,"CD74/B2M/HLA-E/CD55/HLA-F",5
"GO:0050866","negative regulation of cell activation","7/178","199/18670",0.00303144444118315,0.0391811665539767,0.0328613847050078,"CD74/BANK1/PTPRC/HLA-F/LYN/PRNP/IRF1",7
"GO:0042982","amyloid precursor protein metabolic process","4/178","63/18670",0.00307092251508559,0.0391811665539767,0.0328613847050078,"ITM2B/ITM2C/LYN/PRNP",4
"GO:0046686","response to cadmium ion","4/178","63/18670",0.00307092251508559,0.0391811665539767,0.0328613847050078,"B2M/FOS/PRNP/CYBB",4
"GO:1904377","positive regulation of protein localization to cell periphery","4/178","63/18670",0.00307092251508559,0.0391811665539767,0.0328613847050078,"EZR/CIB1/ITGB1/PRNP",4
"GO:0014074","response to purine-containing compound","6/178","149/18670",0.00308103248665024,0.0391811665539767,0.0328613847050078,"DUSP1/EZR/JUNB/FOS/FOSB/PER1",6
"GO:1903900","regulation of viral life cycle","6/178","149/18670",0.00308103248665024,0.0391811665539767,0.0328613847050078,"CD74/ISG20/VPS37B/IFITM2/IFITM1/RESF1",6
"GO:0072678","T cell migration","4/178","65/18670",0.00343946020268722,0.0435391378038377,0.0365164307990989,"GPR183/CD99/SELENOK/ITGA4",4
"GO:0070371","ERK1 and ERK2 cascade","9/178","317/18670",0.00345499082752177,0.0435391378038377,0.0365164307990989,"CD74/DUSP1/EZR/ZFP36L2/GPR183/PTPRC/CIB1/SCIMP/LYN",9
"GO:0045766","positive regulation of angiogenesis","7/178","204/18670",0.00347622802006287,0.0436094370985365,0.0365753910693196,"BTG1/CXCR4/RHOB/CIB1/ITGB2/ITGB1/CYBB",7
"GO:0071222","cellular response to lipopolysaccharide","7/178","205/18670",0.00357085705972154,0.0445956812167018,0.0374025575431772,"CD55/VIM/ZFP36/MEF2C/LYN/LY86/PDE4B",7
"GO:0045428","regulation of nitric oxide biosynthetic process","4/178","66/18670",0.00363453297610172,0.0451882782966218,0.0378995708363239,"KLF2/ACP5/DDAH2/ITGB2",4
"GO:0002717","positive regulation of natural killer cell mediated immunity","3/178","33/18670",0.00376765352085959,0.046635178024862,0.0391130908200581,"HLA-E/HLA-F/NCR3",3
"GO:0051014","actin filament severing","2/178","10/18670",0.00386805062241376,0.0474560395745477,0.0398015503414613,"GMFG/MYH9",2
"GO:2000271","positive regulation of fibroblast apoptotic process","2/178","10/18670",0.00386805062241376,0.0474560395745477,0.0398015503414613,"BTG1/STK17B",2
"GO:0048545","response to steroid hormone","10/178","385/18670",0.00394039116633114,0.048131532448387,0.0403680886338357,"TXNIP/DUSP1/ZFP36L2/NR4A2/FOS/ZFP36/FOSB/PER1/ATP2B1/CYBB",10
"GO:1903829","positive regulation of cellular protein localization","9/178","324/18670",0.00398529408721758,0.0484674411917072,0.0406498164998199,"EZR/YWHAZ/OAZ1/CIB1/VAMP2/PPP3CC/ITGB2/ITGB1/PRNP",9
"GO:0010922","positive regulation of phosphatase activity","3/178","34/18670",0.00410359550007012,0.0494740842757372,0.0414940916594013,"CALM1/PTPRC/MEF2C",3
"GO:0043368","positive T cell selection","3/178","34/18670",0.00410359550007012,0.0494740842757372,0.0414940916594013,"CD74/LY9/PTPRC",3
"GO:0032970","regulation of actin filament-based process","10/178","388/18670",0.00416013044029048,0.0499394968802111,0.0418844348775162,"TMSB4X/COTL1/RHOB/SNX9/MEF2C/GMFG/MYADM/CAPG/PDE4B/MYH9",10


Unnamed: 0,Title,Conditions,Sponsor/Collaborators,Start Date,Locations,URL
0,Mental Activity During (TMS) Therapy for Depression,Cognitive Impairment,"Augusta University|Lumos Labs, Inc.","March 6, 2015","Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03701932
1,Durability and Impact of the Seasonal Influenza Vaccine on H5 Induced B Cell Response,Influenza A Subtype H5N1 Infection,Emory University|National Institute of Allergy and Infectious Diseases (NIAID),October 2018,"The Hope Clinic of Emory University, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT03701061
7,Youth Engagement Study: Intervention to Increase HIV Treatment Engagement and Adherence for Young People Living With HIV,HIV/AIDS,University of Connecticut|Mercer University,"July 1, 2017","Southeast HIV/AIDS Research & Evaluation Project, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03665532
9,"A Phase 2, Multicenter, Randomized, Double-blind, Placebo-controlled Study to Evaluate the Efficacy, Safety, and Tolerability of TAK-935 (OV935) as an Adjunctive Therapy in Pediatric Patients With Developmental and/or Epileptic Encephalopathies",Epilepsy|Dravet Syndrome|Lennox-Gastaut Syndrome,Takeda|Ovid Therapeutics,"August 8, 2018","Center for Rare Neurological Diseases, Norcross, Georgia, United States",https://ClinicalTrials.gov/show/NCT03650452
12,Music Therapy With Intubated and Sedated Pediatric Patients,Respiratory Syncytial Virus Infections,Children's Healthcare of Atlanta,"January 16, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03629145
14,Gabapentin Premedication to Reduce Postoperative Pain for Pediatric Tonsillectomy,Tonsillitis|Tonsillectomy,Children's Healthcare of Atlanta,"July 31, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03625011
16,A Sleep Intervention (SLEEP-Extend) for Young Adults At-Risk for Type 2 Diabetes,"Diabetes Mellitus, Type 2",Emory University|National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK),September 2018,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03616171
19,Long Term Comparative Effectiveness of Once Weekly Semaglutide Versus Standard of Care in a Real World Adult US Population With Type 2 Diabetes - a Randomized Pragmatic Trial,"Diabetes Mellitus, Type 2",Novo Nordisk A/S,"July 13, 2018","Novo Nordisk Investigational Site, Statesboro, Georgia, United States",https://ClinicalTrials.gov/show/NCT03596450
23,Adiposity and Endothelin Receptor Function,Hypertension,"Augusta University|National Heart, Lung, and Blood Institute (NHLBI)","May 21, 2018","Georgia Prevention Institute/ Laboratory of Integrative and Exercise Physiology, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03583866
25,Weight Loss Aid in an Exposed Population,Polybrominated Biphenyl Poisoning,Emory University|Healthway Compounding Pharmacy in central Michigan|Michigan Public Health Departments,"September 14, 2018","Michele Marcus, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03582722
30,Improving Health-Promoting Behaviors in Adolescent Cancer Survivors Using AWAKE: A Feasibility Trial,Health Behavior,Emory University,"June 20, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03564587
31,Cognitive Behavioral Therapy for African Americans With Uncontrolled Type-2 Diabetes,"Diabetes Mellitus, Type 2",Emory University|National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK),October 2018,"Emory Dunwoody Clinic, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03562767
32,The Effects of Contact Lenses With Experimental Dye on Visual Function,Ametropia,"Johnson & Johnson Vision Care, Inc.","May 15, 2018","Georgia Center for Sight, Statesboro, Georgia, United States",https://ClinicalTrials.gov/show/NCT03556579
36,Evaluating the Effects of Propofol vs. Dexmedetomidine,Sedative Adverse Reaction,Children's Healthcare of Atlanta|Morehouse School of Medicine,"July 24, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03552146
40,Effect of DASH Eating Pattern on Heart Failure Outcomes,Heart Failure NYHA Class III,University of Georgia|Emory University,June 2018,"University of Georgia Clinical and Translational Research Unit, Athens, Georgia, United States",https://ClinicalTrials.gov/show/NCT03538990
42,Rifaximin for Infection Prophylaxis in Hematopoietic Stem Cell Transplantation,Microbial Colonization,Emory University,"July 18, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03529825
46,"Prospective Psychometric Evaluation Study of a Patient-reported Outcomes (PRO) Instrument for Congenital Thrombotic Thrombocytopenic Purpura (cTTP, Upshaw-Schulman Syndrome [USS], Hereditary Thrombotic Thrombocytopenic Purpura [hTTP]",Congenital Thrombotic Thrombocytopenic Purpura,Baxalta now part of Shire|Shire,"July 12, 2018","AutoCruitment, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03519672
48,Sleep-Safe: A Strong African American Families Study,Weight Gain,University of Georgia|Augusta University|National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK),"March 4, 2018","University of Georgia, Athens, Georgia, United States",https://ClinicalTrials.gov/show/NCT03505203
49,Spironolactone & RAAS: Effect on Urinary Proteinuria & Mean Epidermal Growth Factor Receptor,"Renal Insufficiency, Chronic|Diabetic Nephropathy Type 2","NephroNet, Inc.","March 1, 2018","NephroNet, Buford, Georgia, United States",https://ClinicalTrials.gov/show/NCT03502031
50,Evaluation of Human Immune Responses to Influenza Virus Vaccination in Patients With Lymphoma,Chronic Lymphocytic Leukemia|Diffuse Large B-Cell Lymphoma|Follicular Lymphoma|Mantle Cell Lymphoma|Mature T-Cell and NK-Cell Non-Hodgkin Lymphoma,Emory University,"April 6, 2018","Emory University Hospital/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03501576
51,Meditation for Pain,Chronic Pain,Emory University,"June 5, 2018","Emory University Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03495726
52,Fludeoxyglucose F-18-PET in Planning Lung Cancer Radiation Therapy,Stage I Lung Cancer|Stage I Non-Small Cell Lung Cancer AJCC v7|Stage IA Non-Small Cell Lung Carcinoma AJCC v7|Stage IB Non-Small Cell Lung Carcinoma AJCC v7|Stage II Lung Cancer|Stage II Non-Small Cell Lung Cancer AJCC v7|Stage IIA Non-Small Cell Lung Carcinoma AJCC v7|Stage IIB Non-Small Cell Lung Carcinoma AJCC v7,Emory University|RefleXion Medical,"April 13, 2018","Emory University Hospital/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03493789
53,"Effect of Vibration on Muscle Properties, Physical Activity and Balance in Children With Cerebral Palsy","Cerebral Palsy, Spastic",University of Georgia|Emory University,"November 2, 2018","University of Georgia, Athens, Georgia, United States",https://ClinicalTrials.gov/show/NCT03484078
54,Smartphone-Enabled Supervised Exercise Therapy for the Treatment of Symptomatic Peripheral Arterial Disease,Peripheral Arterial Disease,Emory University|Woodruff Health Sciences Center Foundation,"August 24, 2018","Grady Health System (non-CRN), Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03479255
56,Effect of Ketorolac on Post Adenotonsillectomy Pain,Obstructive Sleep Apnea,Emory University,"July 19, 2018","Childrens Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03467750
57,Innovative Gait Biofeedback Strategies for Stroke Rehabilitation,"Stroke, Cardiovascular|Gait, Hemiplegic",Emory University,"March 22, 2018","Emory Univeristy, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03466372
59,"Compassion Meditation and ReliefLink App for Suicidal, Low-Income, African Americans",Suicidal Ideation,Emory University,"May 13, 2010","Grady Health System (non-CRN), Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03463980
60,GPR109A and Parkinson's Disease: Role of Niacin in Outcome Measures,Parkinson's Disease,VA Office of Research and Development,"September 28, 2016","Charlie Norwood VA Medical Center, Augusta, GA, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03462680
62,Achilles Tendinopathy Shear Wave Elastography Study,Achilles Tendinopathy,Emory University,"February 27, 2018","Emory Orthopaedics and Spine Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03456778
65,Contemplative Well-being Apps for the Workplace,Social Behavior|Depression|Inflammation,Emory University,"June 6, 2016","Emory University, Wesley Woods Health Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03452670
66,Chemotherapy-Induced Peripheral Neuropathy-Essential Oil Intervention,Breast Cancer|Peripheral Neuropathies,Augusta University|American Holistic Nurses Association|American Nurses Foundation|Ananda Apothecary|The Jojoba Company,"June 25, 2018","Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03449303
68,Living Well With a Disability Curriculum Adaptation Evaluation Plan,Health Education|Community Health Services|Health Services for Persons With Disabilities|Developmental Disabilities,Georgia Southern University,"March 24, 2018","B and B Care Services, Springfield, Georgia, United States",https://ClinicalTrials.gov/show/NCT03447119
69,Gemcabene for the Treatment of Pediatric NAFLD,Non-Alcoholic Fatty Liver Disease,"Emory University|Gemphire Therapeutics, Inc.","March 29, 2018","Children's Healthcare of Atlanta / Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03436420
70,Gabapentin Premedication for ACL Reconstruction: RCT,Anterior Cruciate Ligament (ACL) Reconstruction,Children's Healthcare of Atlanta,"October 9, 2015","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03417479
71,Exercise is Medicine at Emory Seavey Internal Medicine Clinic,Physical Activity,Emory University,"August 20, 2018","Paul W. Seavey Internal Medicine Clinic, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03416634
72,Paravertebral Nerve Blocks in Neonates,Congenital Heart Disease,Emory University,"July 18, 2018","Children's Healtcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03408340
74,ULTRAsound-assisted Catheter vs. STAndaRd Catheter Thrombolysis for Submassive Pulmonary Embolism,Submassive Pulmonary Embolism,Piedmont Healthcare,"December 6, 2017","Piedmont Healthcare, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03389971
76,CBT for African Americans With Cognitive Impairment,Alzheimer Disease,Emory University|Alzheimer's Association,"January 10, 2018","Emory Clinic, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03384069
77,iEAT 2.0 Open Trial,Gastrointestinal Disorders,Emory University,"November 29, 2017","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03383029
79,Exercise and RP (AVAMC and Emory),Retinitis Pigmentosa,Emory University,"February 23, 2018","Emory Clinic, Atlanta VA Medical Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03381235
80,VX15/2503 and Immunotherapy in Resectable Pancreatic and Colorectal Cancer,Colon Carcinoma Metastatic in the Liver|Colorectal Adenocarcinoma|Pancreatic Adenocarcinoma|Resectable Pancreatic Carcinoma|Stage I Pancreatic Cancer|Stage IA Pancreatic Cancer|Stage IB Pancreatic Cancer|Stage II Pancreatic Cancer|Stage IIA Pancreatic Cancer|Stage IIB Pancreatic Cancer|Stage III Pancreatic Cancer|Stage IV Colorectal Cancer|Stage IVA Colorectal Cancer|Stage IVB Colorectal Cancer,Emory University|Vaccinex Inc.,"December 15, 2017","Emory University Hospital/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03373188
81,Exercise Effects on Word Learning,Aging|Aphasia,VA Office of Research and Development,"December 9, 2016","Atlanta VA Medical and Rehab Center, Decatur, GA, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT03370471
83,HGNS on Cardiovascular Outcomes,Obstructive Sleep Apnea,Emory University|American Heart Association|American Academy of Sleep Medicine,"December 13, 2017","Raj C. Dedhia, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03359096
84,IAI for Persistent DME After Treatment With Bevacizumab And Ranibizumab,Diabetic Macular Edema,"Southeast Retina Center, Georgia",June 2015,"Southeast Retina Center, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03340610
85,Longitudinal Assessment of Exercise Capacity and Vascular Function in Patients With CF,Cystic Fibrosis,Augusta University|Vertex Pharmaceuticals Incorporated,May 2014,"Georgia Prevention Institute, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03338595
86,AflacLL1602 ENCERT,Lymphoblastic Leukemia|Lymphoblastic Lymphoma,Emory University,"July 24, 2018","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03328104
87,Neostigmine For Snoring During DISE,Snoring,Emory University,"November 14, 2017","Raj C. Dedhia, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03316963
88,Two-Phased Study of SPIRIT in Mild AD,Alzheimer Disease and Related Dementias,Emory University|National Institute on Aging (NIA),"May 4, 2018","Emory Brain Health Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03311711
89,Vitamin K to Slow Progression of Cardiovascular Disease Risk in Hemodialysis Patients,Cardiovascular Diseases|Chronic Kidney Disease Stage 3|Chronic Kidney Disease Stage 4|Chronic Kidney Disease Stage 5|Vitamin K Deficiency|Hemodialysis - Augusta University Study,Augusta University,"September 13, 2017","Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03311321
90,Thyroid Ultrasound Elasticity (TrUE) Imaging,"Cancer, Thyroid",Emory University,"October 23, 2017","Emory Univeristy Hospital Midtown, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03307694
91,Promoting Transactional Supports to Optimize Social Communication Outcomes for Infants and Their Families,Autism Spectrum Disorder,Emory University,"February 1, 2018","Marcus Autism Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03307057
92,Granulocyte-Macrophage Stimulating Factor (GM-CSF) in Peripheral Arterial Disease,Peripheral Artery Disease (PAD),"Emory University|National Heart, Lung, and Blood Institute (NHLBI)","December 19, 2017","Emory University Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03304821
96,Correlation of CO2 Measured by Blood Gas vs Transcutaneous Monitor,Respiratory Complication,Memorial Health University Medical Center,"August 29, 2017","Memorial University Medical Center, Savannah, Georgia, United States",https://ClinicalTrials.gov/show/NCT03268395
98,Pembrolizumab and Radiation Therapy in Patients With Relapsed or Refractory Multiple Myeloma,ISS Stage I Plasma Cell Myeloma|ISS Stage II Plasma Cell Myeloma|ISS Stage III Plasma Cell Myeloma|Recurrent Plasma Cell Myeloma|Refractory Plasma Cell Myeloma,Emory University|Merck Sharp & Dohme Corp.,"May 29, 2018","Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03267888
99,Pembrolizumab + Idelalisib for Lung Cancer Study,Non Small Cell Lung Cancer|Metastasis|Recurrence,Zhonglin Hao|Merck Sharp & Dohme Corp.|Gilead Sciences|Augusta University,"September 26, 2017","Georgia Cancer Center at Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03257722
100,Safety and Efficacy of Propranolol in the Treatment of Tardive Dyskinesia,Tardive Dyskinesia,Emory University|Atlanta Clinical and Translational Science Institute,"September 18, 2017","Emory Clinic, Executive Park, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03254186
101,Immunologic Responses to a Live Attenuated Oral Cholera Vaccine,Cholera,Emory University,"August 29, 2017","The Hope Clinic of Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03251495
102,App Reminder on ASA Adherence,Thromboembolic Event,Emory University|National Association of Orthopedic Nurses,"October 3, 2017","Emory Orthopedic and Spine Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03244267
103,Spinal Cord Stimulation to Augment Activity Based Therapy,Spinal Cord Stimulation|Walking|Spasticity|Human|Spinal Cord Injuries,"Shepherd Center, Atlanta GA|Foundation Wings For Life","July 1, 2017","Shepherd Center, Inc., Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03240601
104,Enhancing Corticospinal Activation for Improved Walking Function,Spinal Cord Injuries,"Shepherd Center, Atlanta GA|National Institute on Disability, Independent Living, and Rehabilitation Research","March 1, 2017","Shepherd Center, Inc., Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03237234
105,Enhancing Corticospinal Excitability to Improve Functional Recovery,Spinal Cord Injuries|Tetraplegia,"Shepherd Center, Atlanta GA|The Craig H. Neilsen Foundation","May 3, 2018","Shepherd Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03237091
107,A Randomized Study to Evaluate the Efficacy of Insulclock® in Patients With Uncontrolled Type 2 Diabetes,Diabetes,Emory University|Insulcoud S.L.,"November 29, 2017","Emory Clinic, Emory University Hospital (non-CRN), Emory University Hospital Clinical Research Network, Emory University Hospital Midtown, Grady Health System (non-CRN), Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03224234
108,Home Versus Office Biofeedback Therapy for Fecal Incontinence,Fecal Incontinence - Augusta University Study,Augusta University,October 2015,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03216291
110,Microneedle Patch Study in Healthy Infants/Young Children,Vaccination|Skin Absorption,Emory University|Micron Biomedical,"July 11, 2017","Emory Children's Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03207763
113,Encopresis & MIE (DoD #2),Encopresis|Autism Spectrum Disorder,Emory University|United States Department of Defense,"October 25, 2017","Marcus Autism Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03197922
115,"""Evaluation of MDMA on Startle Response",Startle Response,Multidisciplinary Association for Psychedelic Studies,"September 21, 2017","Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03181763
116,Dry Needling and Spinal Manipulation vs. Conventional PT for Lumbar Spinal Stenosis,Lumbar Spinal Stenosis,Alabama Physical Therapy & Acupuncture|Universidad Rey Juan Carlos,"March 15, 2017","Benchmark PT - Canton, Canton, Georgia, United States",https://ClinicalTrials.gov/show/NCT03167736
118,Glutathione (GSH) Supplementation After Hospitalization,Malnutrition,"Emory University|Your Energy Systems, LLC",September 2019,"Emory University Hospital Clinical Research Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03166371
120,SMS-Based Follow-Ups to Improve Post-Discharge Surgical Outcomes,Surgical Site Infection,Emory University,"June 9, 2017","Grady Health System, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03161262
123,Examination of Differential Valuation of Leisure Items and Attention as Reinforcers in Children With Autism,Autism,Emory University|National Institute of Mental Health (NIMH),"June 22, 2012","Marcus Autism Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03152383
125,Intranasal (NAS) Ketamine for Cancer Pain,Cancer|Pain,Emory University,"July 25, 2017","Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03146806
130,Overcoming Psychological Distress Through Hymns,Cancer,Emory University,"June 28, 2018","Grady Cancer Center for Excellence, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03082612
132,Evaluating Effectiveness of Powered Drill Bone Marrow Biopsy,Plasma Cell Myeloma,Emory University,"February 14, 2017","Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03078452
133,Stroke COunseling for Risk REduction,Stroke,Georgia State University,"March 1, 2017","Georgia State University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03076125
135,A Study of Pleiotropic Pioglitazone Effects on the Alcoholic Lung (APPEAL Study),Alcoholism,Emory University|National Institute on Alcohol Abuse and Alcoholism (NIAAA),"January 3, 2018","Atlanta VA Medical Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT03060772
138,Open Trial Obesity CHANGE Program ASD,Autism Spectrum Disorder|Obesity,Emory University,"October 6, 2017","Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03047018
139,Anti-LPS Antibody Treatment for Pediatric NAFLD,Nonalcoholic Fatty Liver Disease (NAFLD),"Miriam Vos, MD|Advanced MR Analytics AB|Immuron Ltd.|Emory University","February 1, 2017","Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03042767
140,"Delirium Prevention With Ketamine in Ear, Nose, and Throat (ENT) Patients",Otolaryngeal Cancer,Emory University,"March 17, 2017","Emory University Hospital Midtown, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03040024
143,"Testing Tele-Savvy, an On-line Psychoeducation Program for Dementia Family Caregivers",Alzheimer Disease|Dementia,Emory University|National Institute on Aging (NIA),"May 18, 2017","Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03033875
148,TMS for Suicidal Crisis in Active Duty SMs,Suicide|Suicidal Ideation|Suicidal Impulses|Suicidal Intention|Suicidal and Self-Injurious Behavior|Suicidal Depression,Eisenhower Army Medical Center|Congressionally Directed Medical Research Programs|Augusta University|The Geneva Foundation,"June 12, 2017","Eisenhower Army Medical Center, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03014362
149,Comparing Mesenchymal Stem Cell Counts in Unilateral vs. Bilateral Posterior Superior Iliac Spine Bone Marrow Aspiration,Osteoarthritis,Emory University,"September 7, 2017","The Emory Clinic, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03014037
150,A Feasibility Study of N-acetylcysteine for Self-injurious Behavior in Children With Autism Spectrum Disorder,Autism Spectrum Disorder,Emory University,"July 5, 2018","Marcus Autism Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03008889
151,Feasibility Study: fMRI Evaluation of Auricular PENFS for Fibromyalgia,Fibromyalgia,VA Office of Research and Development,"June 1, 2017","Atlanta VA Medical and Rehab Center, Decatur, GA, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT03008837
152,Dynamics of Inflammation and Its Blockade on Motivational Circuitry in Depression,Depression,Emory University,August 2016,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03006393
153,Inflammation-Induced CNS Glutamate Changes in Depression,Depression,Emory University,"May 15, 2017","Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT03004443
156,Closed Loop Vagal Nerve Stimulation for Patients With Posttraumatic Stress Disorder,PostTraumatic Stress Disorder,Emory University|Georgia Institute of Technology,"April 19, 2017","Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02992899
159,Endolaserless Vitrectomy With Intravitreal IAI for PDR-Related VH,Proliferative Diabetic Retinopathy,"Southeast Retina Center, Georgia",June 2016,"Southeast Retina Center, PC, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02976012
160,Pembrolizumab in Patients With Locally Advanced or Metastatic Skin Cancer,Recurrent Skin Carcinoma|Skin Squamous Cell Carcinoma,Emory University|Merck Sharp & Dohme Corp.,"January 27, 2017","Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02964559
161,Vitamin K to Slow Progression of Dyslipidemia and Diabetes Risk (Vita-K 'n' Kids Study II),Obesity|Insulin Resistance|Obesity in Diabetes|Nutritional and Metabolic Diseases|Hyperlipidemia|Hyperglycemia|Cardiovascular Diseases - Augusta University Study,Augusta University,October 2016,"Medical College of Georgia; Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02959762
165,Acupuncture for Postoperative Analgesia in Laparoscopic Surgery,Surgery,Emory University,September 2016,"Atlanta Veterans Affairs (VA) Medical Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02940288
167,FMT for MDRO Colonization After Infection in Renal Transplant Recipients,Infection Due to Resistant Organism,Emory University|Cepheid,"December 1, 2016","Emory University Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02922816
170,Adapting Project UPLIFT for Blacks in Georgia,Depressive Symptoms,Morehouse School of Medicine|Emory University,August 2016,"Demetrius Geiger, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02909387
171,Palbociclib With Cisplatin or Carboplatin in Advanced Solid Tumors,Solid Neoplasm|Stage III Pancreatic Cancer|Stage IIIA Breast Cancer|Stage IIIA Non-Small Cell Lung Cancer|Stage IIIB Breast Cancer|Stage IIIB Non-Small Cell Lung Cancer|Stage IIIC Breast Cancer|Stage IV Breast Cancer|Stage IV Non-Small Cell Lung Cancer|Stage IVA Pancreatic Cancer|Stage IVB Pancreatic Cancer|Sarcoma|Colorectal Cancer|Head and Neck Cancer|Cancer of Unknown Primary|Bladder Cancer|Ovarian Cancer,Emory University|Pfizer,October 2016,"Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02897375
179,Tocilizumab in Schizophrenia,Schizophrenia|Psychotic Disorders,Brian Miller|Brain & Behavior Research Foundation|Augusta University,September 2016,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02874573
184,Pembrolizumab + Poly-ICLC in MRP Colon Cancer,Metastatic Colon Cancer|Solid Tumor,"Asha Nayak|Oncovir, Inc.|Merck Sharp & Dohme Corp.|Augusta University","January 10, 2018","Georgia Cancer Center at Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02834052
191,Siltuximab in Schizophrenia,Schizophrenia|Psychotic Disorders,Brian Miller|Stanley Medical Research Institute|Augusta University,May 2016,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02796859
193,Smartphone Delivered In-home Cardiopulmonary Rehabilitation,Cardiovascular Disease|Coronary Artery Disease,Emory University|Atlanta VA Medical Center,May 2016,"Atlanta VA Medical Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02791685
194,Aerobic Exercise and Cognitive Training in Older Adults,Sedentary Lifestyle,VA Office of Research and Development,"February 1, 2013","Atlanta VA Medical and Rehab Center, Decatur, GA, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT02787655
196,Long Term Nitric Oxide Bioavailability on Vascular Health in Chronic Obstructive Pulmonary Disease,Chronic Obstructive Pulmonary Disease (COPD) - Augusta University Study,Augusta University,September 2015,"Georgia Prevention Institute, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02774226
199,Transfusion of Biotinylated Red Blood Cells,Anemia,Emory University,April 2016,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02757898
200,Transplantation Using Reduced Intensity Approach for Patients With Sickle Cell Disease From Mismatched Family Donors of Bone Marrow,Sickle Cell Disease,Emory University,April 2016,"Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02757885
202,Defining a PD-specific Breath Fingerprint of Underlying Inflammatory and Neurodegenerative Processes,Parkinson's Disease,Emory University|Michael J. Fox Foundation for Parkinson's Research,February 2016,"The Emory Clinic Executive Park, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02749214
204,Pioglitazone and Tyrosine Kinase Inhibitor in Treating Patients With Relapsed Chronic Myeloid Leukemia,"Chronic Myelogenous Leukemia, BCR-ABL1 Positive|Recurrent Chronic Myelogenous Leukemia, BCR-ABL1 Positive",Emory University,May 2016,"Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02730195
207,The Role of Endothelin-1 in Sickle Cell Disease,Sickle Cell Anemia,"Augusta University|Gilead Sciences|National Heart, Lung, and Blood Institute (NHLBI)",September 2015,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02712346
209,"Dasatinib or Nilotinib Followed by Imatinib in Patients With Newly Diagnosed, Chronic Phase Chronic Myeloid Leukemia",Chronic Myelogenous Leukemia|Chronic Myeloid Leukemia|Leukemia,Emory University,October 2016,"Emory University/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02709083
211,Evaluation of a CarePartner-Integrated Telehealth Rehabilitation Program for Persons With Stroke,Stroke,Emory University,January 2016,"Emory University Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02703532
215,Vibration Training for Preventing Falls in Healthy Population and Multiple Sclerosis,Falls Prevention,Georgia State University,April 2015,"Georgia State University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02694666
217,Mechanisms for Vascular Dysfunction and Exercise Tolerance in CF,Cystic Fibrosis - Augusta University Study,Augusta University,April 2015,"Georgia Prevention Institute, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02690064
221,Effects of Dry Needling Using Spinal and Peripheral Sites Versus Peripheral Sites Only,Plantar Fasciitis|Achilles Tendinitis|Patellofemoral Pain Syndrome,Emory University,"October 27, 2017","The Emory Clinic, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02646579
226,Canagliflozin-Mealtime Insulin Rescue,"Diabetes Mellitus, Type 2","Atlanta Research and Education Foundation|Janssen Scientific Affairs, LLC",April 2016,"Atlanta VA Medical Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT02624908
227,The Use of Ambulatory Blood Pressure Monitors to Assess Angiotensin Converting Enzyme Inhibitors,"Hypertension, Resistant to Conventional Therapy",Memorial Health University Medical Center,November 2015,"Memorial Family Medicine Center, Savannah, Georgia, United States",https://ClinicalTrials.gov/show/NCT02623036
231,Conditioning Neural Circuits to Improve Upper Extremity Function,Spinal Cord Injury|Tetraplegia,"Shepherd Center, Atlanta GA|United States Department of Defense",January 2017,"Shepherd Center, Inc., Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02611375
234,Suicidal Behavior in Patients Diagnosed With Bipolar Disorder,Depression|Alcoholism|Drug Abuse,Emory University,January 2016,"Grady Health System, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02604277
236,Low Pulse Amplitude Focal ECT (LAP Study),Depression - Augusta University Study,Augusta University,March 2015,"Medical Colleage of Georgia, Augusta University, Evans, Georgia, United States",https://ClinicalTrials.gov/show/NCT02583490
237,RIC Transplant Using Haplo Donors,Chronic Myelogenous Leukemia|Acute Myelogenous Leukemia|Myelodysplastic Syndrome|Acute Lymphocytic Leukemia|Chronic Lymphocytic Leukemia|Hodgkin's Lymphoma|Non-Hodgkin's Lymphoma|Myelofibrosis|CMML|Multiple Myeloma,"Northside Hospital, Inc.|Blood and Marrow Transplant Group of Georgia",November 2015,"Northside Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02581007
241,Human Milk for Congenital Gastrointestinal Disorders,Congenital Gastrointestinal Disorders,Emory University|Chatham Valley Foundation|Prolacta Bioscience,"July 26, 2018","Children's Healthcare of Atlanta-Egleston, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02567292
243,Premotor Cortex: A New Target for Stroke Motor Rehabilitation,Stroke,Emory University|American Heart Association,September 2015,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02565199
244,Role of Sympathetic Overactivity and Angiotensin II in PTSD and CV,"Stress Disorders, Post-Traumatic",Emory University|American Heart Association,October 2015,"Atlanta VA Medical Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT02560805
248,Inflammation-related Alterations in Neurocircuitry: Reversal With Levodopa,Depression,Emory University|National Institute of Mental Health (NIMH),July 2015,"Emory University Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02513485
249,Analysis of Bone Marrow and Blood B Cell Immune Responses to Influenza Vaccination,Influenza,National Institute of Allergy and Infectious Diseases (NIAID),"December 23, 2015","Emory Clinic - Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02485639
250,Direct Instruction Language for Learning in Autism Spectrum Disorder,Autism Spectrum Disorder|Moderate Language Delay,Emory University,October 2015,"Marcus Autism Center - Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02483910
253,Health Evaluation in African Americans Using RAS Therapy,Alzheimer's Disease,Emory University,April 2015,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02471833
258,Motor Training in PD,Parkinson Disease,VA Office of Research and Development,"November 3, 2014","Atlanta VA Medical and Rehab Center, Decatur, GA, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT02457832
260,Characterization of 3q29 Deletion Syndrome and 3q29 Duplication Syndrome,Microdeletion 3q29 Syndrome|Microduplication 3q29 Syndrome,Emory University,July 2013,"Internet-Based, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02447861
262,Effects of an Immunosuppressant Mycophenolate Mofetil or MMF on the Urinary Sodium Excretion Response to Mental Stress,"Psychological Stress|Hypertension, Renal - Augusta University Study",Augusta University,April 2014,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02432339
263,Effectiveness of Prazosin on the Urinary Sodium Excretion Response to Mental Stress,"Hypertension|Stress, Psychological|Blood Pressure",Augusta University|The University of Texas at Arlington,April 2015,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02431936
268,High Dose Chemotherapy Using BeEAM for Autologous Transplant in Multiple Myeloma,Multiple Myeloma,"Northside Hospital, Inc.|Teva Pharmaceuticals USA",April 2015,"Blood and Marrow Transplant Group of Georgia, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02416206
270,Sympatholysis in Chronic Kidney Disease,Chronic Kidney Disease,Emory University,May 2015,"Atlanta VA Medical Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT02411773
276,Simvastatin With Topotecan and Cyclophosphamide in Relapsed and/or Refractory Pediatric Solid and CNS Tumors,Retinoblastoma|Clear Cell Sarcoma|Renal Cell Carcinoma|Rhabdoid Tumor|Wilms Tumor|Hepatoblastoma|Neuroblastoma|Germ Cell Tumors|Ewings Sarcoma|Non-rhabdomyosarcoma Soft Tissue Sarcoma|Osteosarcoma|Rhabdomyosarcoma,Emory University|Children's Healthcare of Atlanta,February 2015,"Children's Healthcare of Atlanta/Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02390843
277,Effectiveness of Avapro in Obese Normotensive/Hypertensive African Americans,"Hypertension|Obesity|Stress, Psychological|Blood Pressure - Augusta University Study",Augusta University,September 2014,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02386293
278,Evaluation of Human Immune Responses to Influenza Virus Vaccination in Healthy Volunteers,Influenza,National Institute of Allergy and Infectious Diseases (NIAID),"April 1, 2015","Emory University Hospital - W. Dean Warren General Clinical Research Center (GCRC), Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02385123
287,Vitamin K and Glucose Metabolism in Adults at Risk for Diabetes (Vita-K 'n' Adults Study),Obesity|Insulin Resistance|Insulin Sensitivity|Beta-Cell Dysfunction|Prediabetes,Augusta University|University of Alabama at Birmingham|Yale University|Tufts University|Nattopharma ASA,February 2015,"Medical College of Georgia; Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02366481
288,BMT Auto MSCs GvHD Ph 1,Graft Versus Host Disease|Acute Graft Versus Host Disease|Chronic Graft Versus Host Disease,Emory University|CURE Foundation,January 2015,"Children's Healthcare of Atlanta/Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02359929
289,Role of Cardiometabolic Risk Factors in Childhood Bone Development,Obesity|Cardiovascular Disease|Type 2 Diabetes|Osteoporosis - Augusta University Study,Augusta University,December 2014,"Medical College of Georgia; Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02355717
290,Phase II Pegylated Interferon,Juvenile Pilocytic Astrocytomas|Optic Pathway Gliomas,"Emory University|CURE Childhood Cancer, Inc.",November 2014,"Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02343224
291,Dose-Response Effects of Whole Body Vibration on Spasticity and Walking in SCI,Spinal Cord Injury,"Shepherd Center, Atlanta GA|National Institutes of Health (NIH)",January 2015,"Shepherd Center, Inc., Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02340910
306,Researching Alveolar Macrophage Improvements With Supplements in HIV,HIV-1 Infection,"Emory University|National Institutes of Health (NIH)|National Heart, Lung, and Blood Institute (NHLBI)",October 2014,"Ponce De Leon Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02264860
317,BioEnergetics and Metabolomics in Cystic Fibrosis,Cystic Fibrosis,Emory University|National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK),September 2014,"Emory university Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02225899
318,Steroids in Total Knee Arthroplasty,Postoperative Pain|Inflammation|Osteoarthritis,Emory University,August 2014,"Emory Orthopedic and Spine Hospital, Tucker, Georgia, United States",https://ClinicalTrials.gov/show/NCT02219581
322,Redox Imbalance and the Development of Cystic Fibrosis Diabetes,"Diabetes Mellitus, Type 2|Cystic Fibrosis",Emory University|Cystic Fibrosis Foundation Therapeutics,November 2014,"Children's Healthcare of Atlanta and Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02202876
339,The ISLAND Study: InSuLa Assessed Needs for Depression,Depression,Emory University|National Institute of Mental Health (NIMH),September 2014,"12 Executive Park Drive, 3rd floor, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02137369
349,Endothelin Receptor Function and Acute Stress,Hypertension,"Augusta University|National Heart, Lung, and Blood Institute (NHLBI)",June 2015,"Georgia Regents University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02116335
350,Nitric Oxide Bioavailability and Early Life Stress (NO-Stress),Cardiovascular Disease,"Augusta University|National Heart, Lung, and Blood Institute (NHLBI)",April 2014,"Georgia Prevention Institute , Georgia Regents University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02115724
354,MOSTEGRA TRIAL:MO-(Dified) STE-(nt) GRA(-ft): Surgeon-modified Fenestrated-branched Stent-grafts,Complex Aortic Aneurysms,"Northside Hospital, Inc.",March 2012,"Northside Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02101463
356,Wall Shear Stress and Neointimal Healing Following PCI in Angulated Coronary Vessels,Coronary Artery Disease,Emory University|Medtronic,May 2014,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT02098876
385,Changing Developmental Trajectories Through Early Treatment,Autism Spectrum Disorders,Emory University|National Institute of Mental Health (NIMH),May 2013,"Marcus Autism Center, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01985022
386,DBS for TRD Medtronic Activa PC+S,Treatment Resistant Depression,Emory University|Hope for Depression Research Foundation|The Dana Foundation,September 2013,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01984710
390,Vitamin K and Glucose Metabolism in Children at Risk for Diabetes (Vita-K 'n' Kids Study),Obesity|Insulin Resistance|Insulin Sensitivity|Prediabetes|Dyslipidemia|Diabetes,Augusta University|University of Alabama at Birmingham|Yale University|Tufts University|Nattopharma ASA,September 2013,"Medical College of Georgia; Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01972113
397,Adjuvant Radiation for High Risk Bladder Cancer,Bladder Cancer|Squamous Cell Carcinoma of the Bladder|Stage III Bladder Cancer|Stage IV Bladder Cancer|Transitional Cell Carcinoma of the Bladder,Emory University,July 2013,"Emory University Hospital/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01954173
400,Mechanisms of Intradialytic Hypertension,Renal Failure Chronic Requiring Hemodialysis|Haemodialysis-induced Symptom|Hypertension,Emory University|Satellite Healthcare,September 2013,"Emory Dialysis Clinics, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01947673
409,BMT Abatacept for Non-Malignant Diseases,Hurler Syndrome|Fanconi Anemia|Glanzmann Thrombasthenia|Wiskott-Aldrich Syndrome|Chronic Granulomatous Disease|Severe Congenital Neutropenia|Leukocyte Adhesion Deficiency|Shwachman-Diamond Syndrome|Diamond-Blackfan Anemia|Dyskeratosis-congenita|Chediak-Higashi Syndrome|Severe Aplastic Anemia|Thalassemia Major|Hemophagocytic Lymphohistiocytosis|Sickle Cell Disease,Emory University,January 2014,"Children's Healthcare of Atlanta, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01917708
436,Effect of Increasing Motor Cortex Inhibition on Task Specific Dystonia,Dystonia,Emory University,February 2013,"Emory University School of Medicine, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01823237
437,DETECT and Retinal Outcomes in Hypertension,Hypertension|Retinal Disorder|Cognitive Impairment,Emory University,November 2012,"Grady Memorial Hospital, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01815567
453,The National Amyotrophic Lateral Sclerosis Registry,Amyotrophic Lateral Sclerosis,Centers for Disease Control and Prevention|VA Office of Research and Development|Centers for Medicare and Medicaid Services,October 2010,"CDC, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01772602
469,Hypofractionated Stereotactic Radiosurgery in Treating Patients With Large Brain Metastasis,"Metastatic Malignant Neoplasm to Brain|Unspecified Adult Solid Tumor, Protocol Specific",Emory University,September 2012,"Emory University Hospital/Winship Cancer Institute, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01705548
478,Stroke Gait Rehabilitation Using Functional Electrical Stimulation,Cerebrovascular Accident,Emory University|Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD)|American Heart Association,August 2013,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01668602
492,Sympathetic Overactivity in Post-traumatic Stress Disorder,Post-traumatic Stress Disorder|Prehypertension,Emory University,July 2012,"Atlanta VA Medical Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT01627301
505,Anti-3-[18F]FACBC Imaging of Parathyroid Adenomas,Parathyroid Disease,"David M. Schuster, MD|Emory University",August 2012,"Emory University, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01574287
595,Immune Responses to Yellow Fever Vaccine,Yellow Fever Vaccine,Emory University|National Institutes of Health (NIH),November 2010,"The Hope clinic of Emory Vaccine Center, Decatur, Georgia, United States",https://ClinicalTrials.gov/show/NCT01244802
638,Safety and Effectiveness of Cord Blood Stem Cell Infusion for the Treatment of Cerebral Palsy in Children,Cerebral Palsy - Augusta University Study,Augusta University,January 2010,"Augusta University, Augusta, Georgia, United States",https://ClinicalTrials.gov/show/NCT01072370
712,Emory Latino Diabetes Education Program,Diabetes,Emory University|Sanofi|Eli Lilly and Company|Takeda|Novo Nordisk A/S,October 2008,"Emory University School of Medicine, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT00793884
854,Cardiology Biobank Registry,Cardiovascular Disease,Emory University,December 2003,"Emory School Of Medicine, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT00378924
859,Deep Brain Stimulation for Treatment Resistant Depression,Major Depressive Disorder,Emory University|The Dana Foundation,September 2006,"Emory University School of Medicine, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT00367003
952,Molecular and Cellular Characterization of Cardiac Tissue in Postnatal Development,Congenital Heart Disease|Tetralogy of Fallot,"Emory University|National Heart, Lung, and Blood Institute (NHLBI)",April 2005,"Emory University School of Medicine, Atlanta, Georgia, United States",https://ClinicalTrials.gov/show/NCT00243776


sample,clinical_information,source_name,Assay Type,AvgSpotLen,Bases,BioProject,BioSample,Bytes,Center Name,Consent,DATASTORE filetype,DATASTORE provider,DATASTORE region,,Experiment,GEO_Accession (exp),gestational_age,Instrument,LibraryLayout,LibrarySelection,LibrarySource,Organism,Platform,ReleaseDate,Sample Name,SRA Study
PHNPR0003,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0006,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0008,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0009,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0010,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0011,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0014,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0016,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0017,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0018,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0019,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0021,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0023,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0024,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0025,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0026,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0027A,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0027B,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0028,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0029,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0030,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0031,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0032,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0033,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0034,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0035,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0036,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0037,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0038A,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0038B,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0041,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHNPR0043,preeclampsia,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0006,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0008,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0011,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0012,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0013,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0014,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0015,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0018,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0019,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0020A,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0020B,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0022,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0023,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0024,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0026,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0027,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0028,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0030,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0031,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0032,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0033,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0034A,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0034B,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0035,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0037,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0038,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0039,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0040,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0041,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0042,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0043A,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0043B,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
PHPR0045,control,Placenta,RNA-Seq,250,0,PRJNA0,SAMN0,1911697768,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX0,GSM0,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA0,2020-04-22T00:00:00Z,GSM0,SRP0
SRR10916911,preeclampsia,placenta,RNA-Seq,300,5851500900,PRJNA602315,SAMN13888095,2510035848,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584224,GSM4277245,38.2,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277245,SRP243468
SRR10916912,preeclampsia,placenta,RNA-Seq,300,6033315900,PRJNA602315,SAMN13888094,2603962819,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584225,GSM4277246,37.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277246,SRP243468
SRR10916913,preeclampsia,placenta,RNA-Seq,300,5837922300,PRJNA602315,SAMN13888093,2532024065,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584226,GSM4277247,37.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277247,SRP243468
SRR10916914,preeclampsia,placenta,RNA-Seq,300,5384850600,PRJNA602315,SAMN13888092,2333085166,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584227,GSM4277248,38.4,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277248,SRP243468
SRR10916915,control,placenta,RNA-Seq,300,5875015500,PRJNA602315,SAMN13888091,2528549701,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584228,GSM4277249,37.6,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277249,SRP243468
SRR10916916,control,placenta,RNA-Seq,300,5094186900,PRJNA602315,SAMN13888090,2203909044,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584229,GSM4277250,38.2,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277250,SRP243468
SRR10916917,control,placenta,RNA-Seq,300,6618529800,PRJNA602315,SAMN13888089,2860990328,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584230,GSM4277251,38.4,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277251,SRP243468
SRR10916918,control,placenta,RNA-Seq,300,5810447100,PRJNA602315,SAMN13888088,2535489561,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX7584231,GSM4277252,38.5,Illumina HiSeq 4000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-08-24T00:00:00Z,GSM4277252,SRP243468
SRR11498040,preeclampsia,Placenta,RNA-Seq,250,5228652000,PRJNA623568,SAMN14549360,2030883717,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073871,GSM4458411,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458411,SRP255609
SRR11498041,preeclampsia,Placenta,RNA-Seq,250,5841145500,PRJNA623568,SAMN14549359,2060468456,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073872,GSM4458412,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458412,SRP255609
SRR11498042,preeclampsia,Placenta,RNA-Seq,250,6134030000,PRJNA623568,SAMN14549358,2156037998,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073873,GSM4458413,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458413,SRP255609
SRR11498043,preeclampsia,Placenta,RNA-Seq,250,5857029000,PRJNA623568,SAMN14549357,2215784380,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073874,GSM4458414,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458414,SRP255609
SRR11498044,preeclampsia,Placenta,RNA-Seq,250,8260164000,PRJNA623568,SAMN14549356,2899528981,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073875,GSM4458415,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458415,SRP255609
SRR11498045,preeclampsia,Placenta,RNA-Seq,250,5756372750,PRJNA623568,SAMN14549355,2146283280,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073876,GSM4458416,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458416,SRP255609
SRR11498046,preeclampsia,Placenta,RNA-Seq,250,8774353750,PRJNA623568,SAMN14549354,3307261673,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073877,GSM4458417,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458417,SRP255609
SRR11498047,preeclampsia,Placenta,RNA-Seq,250,7575094250,PRJNA623568,SAMN14549353,2946094556,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073878,GSM4458418,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458418,SRP255609
SRR11498048,control,Placenta,RNA-Seq,250,6315704250,PRJNA623568,SAMN14549352,2388050889,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073879,GSM4458419,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458419,SRP255609
SRR11498049,control,Placenta,RNA-Seq,250,5234651000,PRJNA623568,SAMN14549351,2145819426,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073880,GSM4458420,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458420,SRP255609
SRR11498050,control,Placenta,RNA-Seq,250,5441768500,PRJNA623568,SAMN14549350,1912215837,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073881,GSM4458421,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458421,SRP255609
SRR11498051,control,Placenta,RNA-Seq,250,5248079500,PRJNA623568,SAMN14549349,1847537049,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073882,GSM4458422,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458422,SRP255609
SRR11498052,control,Placenta,RNA-Seq,250,5213271250,PRJNA623568,SAMN14549348,1859924155,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073883,GSM4458423,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458423,SRP255609
SRR11498053,control,Placenta,RNA-Seq,250,5175471250,PRJNA623568,SAMN14549347,1840323120,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073884,GSM4458424,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458424,SRP255609
SRR11498054,control,Placenta,RNA-Seq,250,5430952000,PRJNA623568,SAMN14549342,1911059637,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073885,GSM4458425,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458425,SRP255609
SRR11498055,control,Placenta,RNA-Seq,250,6592196750,PRJNA623568,SAMN14549341,2511179244,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073886,GSM4458426,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458426,SRP255609
SRR11498056,control,Placenta,RNA-Seq,250,7224091250,PRJNA623568,SAMN14549340,2705017283,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073887,GSM4458427,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458427,SRP255609
SRR11498057,control,Placenta,RNA-Seq,250,6361553750,PRJNA623568,SAMN14549346,2386401940,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073888,GSM4458428,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458428,SRP255609
SRR11498058,control,Placenta,RNA-Seq,250,5969768500,PRJNA623568,SAMN14549345,2218972389,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073889,GSM4458429,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458429,SRP255609
SRR11498059,control,Placenta,RNA-Seq,250,5862383500,PRJNA623568,SAMN14549344,2176535488,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073890,GSM4458430,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458430,SRP255609
SRR11498060,control,Placenta,RNA-Seq,250,5819301500,PRJNA623568,SAMN14549343,2191984914,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073891,GSM4458431,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458431,SRP255609
SRR11498061,control,Placenta,RNA-Seq,250,5334998000,PRJNA623568,SAMN14549339,2020553197,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073892,GSM4458432,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458432,SRP255609
SRR11498062,control,Placenta,RNA-Seq,250,7016941250,PRJNA623568,SAMN14549338,2624634563,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073893,GSM4458433,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458433,SRP255609
SRR11498063,control,Placenta,RNA-Seq,250,6992219750,PRJNA623568,SAMN14549337,2679010079,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073894,GSM4458434,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458434,SRP255609
SRR11498064,control,Placenta,RNA-Seq,250,8406434750,PRJNA623568,SAMN14549336,3274479182,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073895,GSM4458435,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458435,SRP255609
SRR11498065,control,Placenta,RNA-Seq,250,6372816000,PRJNA623568,SAMN14549335,2308349042,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073896,GSM4458436,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458436,SRP255609
SRR11498066,control,Placenta,RNA-Seq,250,5721086500,PRJNA623568,SAMN14549334,2081096448,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073897,GSM4458437,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458437,SRP255609
SRR11498067,control,Placenta,RNA-Seq,250,6320706250,PRJNA623568,SAMN14549333,2309138769,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073898,GSM4458438,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458438,SRP255609
SRR11498068,control,Placenta,RNA-Seq,250,6129292000,PRJNA623568,SAMN14549332,2223234786,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073899,GSM4458439,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458439,SRP255609
SRR11498069,control,Placenta,RNA-Seq,250,7914199250,PRJNA623568,SAMN14549331,2985305823,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073900,GSM4458440,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458440,SRP255609
SRR11498070,control,Placenta,RNA-Seq,250,10292518250,PRJNA623568,SAMN14549330,3881011504,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073901,GSM4458441,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458441,SRP255609
SRR11498071,control,Placenta,RNA-Seq,250,5258229500,PRJNA623568,SAMN14549412,1979383915,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073902,GSM4458442,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458442,SRP255609
SRR11498072,control,Placenta,RNA-Seq,250,5573051750,PRJNA623568,SAMN14549411,2036568739,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073903,GSM4458443,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458443,SRP255609
SRR11498073,control,Placenta,RNA-Seq,250,5084821500,PRJNA623568,SAMN14549410,1871457545,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073904,GSM4458444,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458444,SRP255609
SRR11498074,control,Placenta,RNA-Seq,250,6162808500,PRJNA623568,SAMN14549409,2276896798,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073905,GSM4458445,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458445,SRP255609
SRR11498075,control,Placenta,RNA-Seq,250,6505293000,PRJNA623568,SAMN14549408,2407887150,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073906,GSM4458446,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458446,SRP255609
SRR11498076,control,Placenta,RNA-Seq,250,6345172250,PRJNA623568,SAMN14549407,2369771884,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073907,GSM4458447,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458447,SRP255609
SRR11498077,control,Placenta,RNA-Seq,250,5411214250,PRJNA623568,SAMN14549406,2006719456,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073908,GSM4458448,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458448,SRP255609
SRR11498078,control,Placenta,RNA-Seq,250,6276562500,PRJNA623568,SAMN14549405,2407767646,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073909,GSM4458449,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458449,SRP255609
SRR11498079,control,Placenta,RNA-Seq,250,7387090250,PRJNA623568,SAMN14549404,2781772751,GEO,public,"fastq,sra","gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",,SRX8073910,GSM4458450,0,Illumina HiSeq 2500,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2020-04-22T00:00:00Z,GSM4458450,SRP255609


contentType,title,abstract,affiliations,authorization,authors,citation_text,count_accesses,count_altmetric,count_citations,documentType,doi,doi_url,focus,issue,journal_pcode,journal_title,publishedAt,publishedAtString,subjects,url,volume
editorial,Keep it simple?,,[],True,[],"Keep it simple?. Nature Phys7, 441 (2011).",464,0,0,aplusplus,10.1038/nphys2024,https://doi.org/10.1038/nphys2024,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2024,7
thesis,Geometric intuition,,[],True,"[""Mark Buchanan""]","Buchanan, M. Geometric intuition. Nature Phys7, 442 (2011).",378,1,7,aplusplus,10.1038/nphys2011,https://doi.org/10.1038/nphys2011,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2011,7
books & arts,Inside quantum information,,[],False,"[""Andreas Trabesinger""]","Trabesinger, A. Inside quantum information. Nature Phys7, 443–444 (2011).",13,1,0,aplusplus,10.1038/nphys2020,https://doi.org/10.1038/nphys2020,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2020,7
books & arts,From nowhere to everywhere,,[],False,"[""Peter Rodgers""]","Rodgers, P. From nowhere to everywhere. Nature Phys7, 444–445 (2011).",11,0,0,aplusplus,10.1038/nphys2017,https://doi.org/10.1038/nphys2017,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2017,7
research highlights,Our choice from the recent literature,,[],True,[],"Our choice from the recent literature. Nature Phys7, 446 (2011).",21,0,0,aplusplus,10.1038/nphys2023,https://doi.org/10.1038/nphys2023,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2023,7
news & views,Quantum bouncing ball resonates,,[],True,"[""Geoffrey L. Greene""]","Greene, G. Quantum bouncing ball resonates. Nature Phys7, 447–448 (2011).",47,3,1,aplusplus,10.1038/nphys1990,https://doi.org/10.1038/nphys1990,,6,nphys,nature physics,1302998400,2011-04-17,,https://www.nature.com/articles/nphys1990,7
news & views,Coherence in photosynthesis,,[],True,"[""Gregory D. Scholes""]","Scholes, G. Coherence in photosynthesis. Nature Phys7, 448–449 (2011).",232,0,22,aplusplus,10.1038/nphys2013,https://doi.org/10.1038/nphys2013,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2013,7
news & views,Stout fizz-ics,,[],True,"[""Ed Gerstner""]","Gerstner, E. Stout fizz-ics. Nature Phys7, 449 (2011).",133,0,5,aplusplus,10.1038/nphys2019,https://doi.org/10.1038/nphys2019,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2019,7
news & views,A bit of both,,[],True,"[""Smitha Vishveshwara""]","Vishveshwara, S. A bit of both. Nature Phys7, 450–451 (2011).",92,0,8,aplusplus,10.1038/nphys2014,https://doi.org/10.1038/nphys2014,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2014,7
news & views,Energy dissipation in extreme cold,,[],True,"[""Yuri Sergeev""]","Sergeev, Y. Energy dissipation in extreme cold. Nature Phys7, 451–452 (2011).",25,0,4,aplusplus,10.1038/nphys2015,https://doi.org/10.1038/nphys2015,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2015,7
news & views,Check with the BOSS,,[],True,"[""May Chiao""]","Chiao, M. Check with the BOSS. Nature Phys7, 453 (2011).",13,0,0,aplusplus,10.1038/nphys2018,https://doi.org/10.1038/nphys2018,,6,nphys,nature physics,1306886400,2011-06-01,,https://www.nature.com/articles/nphys2018,7
news & views,The sense of colour centres,,[],True,"[""Dmitry Budker""]","Budker, D. The sense of colour centres. Nature Phys7, 453–454 (2011).",74,0,6,aplusplus,10.1038/nphys1989,https://doi.org/10.1038/nphys1989,,6,nphys,nature physics,1302998400,2011-04-17,,https://www.nature.com/articles/nphys1989,7
letter,Phase-fluctuating superconductivity in overdoped La2−xSrxCuO4,,[],True,"[""Patrick M. C. Rourke"", ""Ioanna Mouzopoulou"", ""Xiaofeng Xu"", ""Christos Panagopoulos"", ""Yue Wang"", ""Baptiste Vignolle"", ""Cyril Proust"", ""Evgenia V. Kurganova"", ""Uli Zeitler"", ""Yoichi Tanabe"", ""Tadashi Adachi"", ""Yoji Koike"", ""Nigel E. Hussey""]","Rourke, P., Mouzopoulou, I., Xu, X. et al. Phase-fluctuating superconductivity in overdoped La2−xSrxCuO4. Nature Phys7, 455–458 (2011).",654,0,43,aplusplus,10.1038/nphys1945,https://doi.org/10.1038/nphys1945,,6,nphys,nature physics,1299974400,2011-03-13,,https://www.nature.com/articles/nphys1945,7
letter,Electric-field sensing using single diamond spins,,[],True,"[""F. Dolde"", ""H. Fedder"", ""M. W. Doherty"", ""T. N\u00f6bauer"", ""F. Rempp"", ""G. Balasubramanian"", ""T. Wolf"", ""F. Reinhard"", ""L. C. L. Hollenberg"", ""F. Jelezko"", ""J. Wrachtrup""]","Dolde, F., Fedder, H., Doherty, M. et al. Electric-field sensing using single diamond spins. Nature Phys7, 459–463 (2011).",5685,23,603,aplusplus,10.1038/nphys1969,https://doi.org/10.1038/nphys1969,,6,nphys,nature physics,1302998400,2011-04-17,,https://www.nature.com/articles/nphys1969,7
letter,Probing collective multi-electron dynamics in xenon with high-harmonic spectroscopy,,[],True,"[""A. D. Shiner"", ""B. E. Schmidt"", ""C. Trallero-Herrero"", ""H. J. W\u00f6rner"", ""S. Patchkovskii"", ""P. B. Corkum"", ""J-C. Kieffer"", ""F. L\u00e9gar\u00e9"", ""D. M. Villeneuve""]","Shiner, A., Schmidt, B., Trallero-Herrero, C. et al. Probing collective multi-electron dynamics in xenon with high-harmonic spectroscopy. Nature Phys7, 464–467 (2011).",1126,0,245,aplusplus,10.1038/nphys1940,https://doi.org/10.1038/nphys1940,,6,nphys,nature physics,1299369600,2011-03-06,,https://www.nature.com/articles/nphys1940,7
letter,Realization of a gravity-resonance-spectroscopy technique,,[],True,"[""Tobias Jenke"", ""Peter Geltenbort"", ""Hartmut Lemmel"", ""Hartmut Abele""]","Jenke, T., Geltenbort, P., Lemmel, H. et al. Realization of a gravity-resonance-spectroscopy technique. Nature Phys7, 468–472 (2011).",945,22,105,aplusplus,10.1038/nphys1970,https://doi.org/10.1038/nphys1970,,6,nphys,nature physics,1302998400,2011-04-17,,https://www.nature.com/articles/nphys1970,7
letter,Direct measurement of the energy dissipated by quantum turbulence,,[],True,"[""D. I. Bradley"", ""S. N. Fisher"", ""A. M. Gu\u00e9nault"", ""R. P. Haley"", ""G. R. Pickett"", ""D. Potts"", ""V. Tsepelin""]","Bradley, D., Fisher, S., Guénault, A. et al. Direct measurement of the energy dissipated by quantum turbulence. Nature Phys7, 473–476 (2011).",249,0,38,aplusplus,10.1038/nphys1963,https://doi.org/10.1038/nphys1963,,6,nphys,nature physics,1301788800,2011-04-03,,https://www.nature.com/articles/nphys1963,7
letter,Separating stretching from folding in fluid mixing,,[],True,"[""Douglas H. Kelley"", ""Nicholas T. Ouellette""]","Kelley, D., Ouellette, N. Separating stretching from folding in fluid mixing. Nature Phys7, 477–480 (2011).",451,0,33,aplusplus,10.1038/nphys1941,https://doi.org/10.1038/nphys1941,,6,nphys,nature physics,1299369600,2011-03-06,,https://www.nature.com/articles/nphys1941,7
letter,Dimension of spatially embedded networks,,[],True,"[""Li Daqing"", ""Kosmas Kosmidis"", ""Armin Bunde"", ""Shlomo Havlin""]","Daqing, L., Kosmidis, K., Bunde, A. et al. Dimension of spatially embedded networks. Nature Phys7, 481–484 (2011).",1042,4,152,aplusplus,10.1038/nphys1932,https://doi.org/10.1038/nphys1932,,6,nphys,nature physics,1298764800,2011-02-27,,https://www.nature.com/articles/nphys1932,7
article,Consistent model of magnetism in ferropnictides,"<p>The discovery of superconductivity in LaFeAsO introduced ferropnictides as a new class of superconducting compounds with critical temperatures second only to those of the cuprates. Although the presence of iron makes the ferropnictides radically different from the cuprates, antiferromagnetism in the parent compounds suggests that superconductivity and magnetism are interrelated in both of them. However, the character of magnetic interactions and spin fluctuations in ferropnictides is not reasonably described by conventional models of magnetism. Here we show that the most puzzling features can be naturally reconciled within a rather simple effective spin model with a biquadratic interaction, which is consistent with electronic structure calculations. By going beyond the Heisenberg model, our description explains numerous experimental observations, including the peculiarities of the spin-wave spectrum, thin domain walls and crossover from a first- to second-order phase transition under doping. The model also offers insight into the occurrence of the nematic phase above the antiferromagnetic phase transition.</p>",[],False,"[""Aleksander L. Wysocki"", ""Kirill D. Belashchenko"", ""Vladimir P. Antropov""]","Wysocki, A., Belashchenko, K. & Antropov, V. Consistent model of magnetism in ferropnictides. Nature Phys7, 485–489 (2011).",338,0,116,aplusplus,10.1038/nphys1933,https://doi.org/10.1038/nphys1933,,6,nphys,nature physics,1299369600,2011-03-06,,https://www.nature.com/articles/nphys1933,7
article,Floquet topological insulator in semiconductor quantum wells,"<p>Topological phases of matter have captured our imagination over the past few years, with tantalizing properties such as robust edge modes and exotic non-Abelian excitations, and potential applications ranging from semiconductor spintronics to topological quantum computation. Despite recent advancements in the field, our ability to control topological transitions remains limited, and usually requires changing material or structural properties. We show, using Floquet theory, that a topological state can be induced in a semiconductor quantum well, initially in the trivial phase. This can be achieved by irradiation with microwave frequencies, without changing the well structure, closing the gap and crossing the phase transition. We show that the quasi-energy spectrum exhibits a single pair of helical edge states. We discuss the necessary experimental parameters for our proposal. This proposal provides an example and a proof of principle of a new non-equilibrium topological state, the Floquet topological insulator, introduced in this paper.</p>",[],False,"[""Netanel H. Lindner"", ""Gil Refael"", ""Victor Galitski""]","Lindner, N., Refael, G. & Galitski, V. Floquet topological insulator in semiconductor quantum wells. Nature Phys7, 490–495 (2011).",4828,7,945,aplusplus,10.1038/nphys1926,https://doi.org/10.1038/nphys1926,,6,nphys,nature physics,1299974400,2011-03-13,,https://www.nature.com/articles/nphys1926,7
article,Time-resolved measurement of spin-transfer-driven ferromagnetic resonance and spin torque in magnetic tunnel junctions,"<p>The bias dependence of the torque that a spin-polarized current exerts on ferromagnetic elements is important for understanding fundamental spin physics in magnetic devices and for applications. Several experimental techniques have been introduced in recent years in attempts to measure spin-transfer torque in magnetic tunnel junctions. However, these techniques have provided only indirect measures of the torque and their results regarding bias dependence are qualitatively and quantitatively inconsistent. Here we demonstrate that spin torque in magnetic tunnel junctions can be measured directly by using time-domain techniques to detect resonant magnetic precession in response to an oscillating spin torque. The technique is accurate in the high-bias regime relevant for applications, and because it detects directly small-angle linear-response magnetic dynamics caused by spin torque it is relatively immune to artefacts affecting competing techniques. At high bias we find that the spin-torque vector differs markedly from the simple lowest-order Taylor series approximations commonly&#160;assumed.</p>",[],False,"[""Chen Wang"", ""Yong-Tao Cui"", ""Jordan A. Katine"", ""Robert A. Buhrman"", ""Daniel C. Ralph""]","Wang, C., Cui, YT., Katine, J. et al. Time-resolved measurement of spin-transfer-driven ferromagnetic resonance and spin torque in magnetic tunnel junctions. Nature Phys7, 496–501 (2011).",529,6,91,aplusplus,10.1038/nphys1928,https://doi.org/10.1038/nphys1928,,6,nphys,nature physics,1298764800,2011-02-27,,https://www.nature.com/articles/nphys1928,7
article,Controlling the quantum stereodynamics of ultracold bimolecular reactions,"<p>Molecular collisions in the quantum regime represent a new opportunity to explore chemical reactions. Recently, atom-exchangereactions were observed in a trapped ultracold gas of KRb molecules. In an external electric field, these polar molecules can easily be oriented and the exothermic and barrierless bimolecular reactions, KRb+KRb&#8594;K<sub>2</sub>+Rb<sub>2</sub>, occur at a rate that rises steeply with increasing dipole moment. Here we demonstrate the suppression of the bimolecular chemical reaction rate by nearly two orders of magnitude when we use an optical lattice trap to confine the fermionic polar molecules in a quasi-two-dimensional, pancake-like geometry, with the dipoles oriented along the tight confinement direction. With the combination of sufficiently tight confinement and Fermi statistics of the molecules, two polar molecules can approach each other only in a &#8216;side-by-side&#8217; collision under repulsive dipole&#8211;dipole interactions. The suppression of chemical reactions is a prerequisite for the realization of new molecule-based quantum systems.</p>",[],False,"[""M. H. G. de Miranda"", ""A. Chotia"", ""B. Neyenhuis"", ""D. Wang"", ""G. Qu\u00e9m\u00e9ner"", ""S. Ospelkaus"", ""J. L. Bohn"", ""J. Ye"", ""D. S. Jin""]","de Miranda, M., Chotia, A., Neyenhuis, B. et al. Controlling the quantum stereodynamics of ultracold bimolecular reactions. Nature Phys7, 502–507 (2011).",838,0,333,aplusplus,10.1038/nphys1939,https://doi.org/10.1038/nphys1939,,6,nphys,nature physics,1300579200,2011-03-20,,https://www.nature.com/articles/nphys1939,7
article,Random walks with barriers,"<p>Restrictions to molecular motion by barriers (membranes) are ubiquitous in porous media, composite materials and biological tissues. A major challenge is to characterize the microstructure of a material or an organism non-destructively using a bulk transport measurement. Here we demonstrate how the long-range structural correlations introduced by permeable membranes give rise to distinct features of transport. We consider Brownian motion restricted by randomly placed and oriented membranes (d&#8722;1-dimensional planes in d dimensions) and focus on the disorder-averaged diffusion propagator using a scattering approach. The renormalization group solution reveals a scaling behaviour of the diffusion coefficient for large times, with a characteristically slow inverse square root time dependence for any d. Its origin lies in the strong structural fluctuations introduced by the spatially extended random restrictions, representing a new universality class of the structural disorder. Our results agree well with Monte Carlo simulations in two dimensions. They can be used to identify permeable barriers as restrictions to transport, and to quantify their permeability and surface area.</p>",[],False,"[""Dmitry S. Novikov"", ""Els Fieremans"", ""Jens H. Jensen"", ""Joseph A. Helpern""]","Novikov, D., Fieremans, E., Jensen, J. et al. Random walks with barriers. Nature Phys7, 508–514 (2011).",546,0,128,aplusplus,10.1038/nphys1936,https://doi.org/10.1038/nphys1936,,6,nphys,nature physics,1299369600,2011-03-06,,https://www.nature.com/articles/nphys1936,7


patient_id,specimen_id,status,specimen_type_display,specimen_datetime,organism_code,organism_display_name,organism_id,drug_id,drug_display_name,rsi_code
99999999999,CCC2,,MRSA Screen,2017-02-14,NA,No growth,2300967,NA,NA,NA
99999999999,CCC1,,Blood Culture,2017-02-13,NA,No growth,2365356,NA,NA,NA
99999999999,BBB8,,MRSA Screen,2016-01-12,NA,No growth,2284807,NA,NA,NA
99999999999,BBB7,,Faeces,2016-05-27,NA,No growth,2392702,NA,NA,NA
99999999999,BBB6,,Urine,2015-04-11,NA,No growth,1960554,NA,NA,NA
99999999999,BBB5,,Blood Culture,2015-07-08,NA,No growth,2110922,NA,NA,NA
99999999999,BBB4,,MRSA Screen,2015-07-08,NA,No growth,2015253,NA,NA,NA
99999999999,BBB3,,MRSA Screen,2015-05-15,NA,No growth,1996884,NA,NA,NA
99999999999,BBB2,,MRSA Screen,2015-03-05,NA,No growth,1994380,NA,NA,NA
99999999999,BBB1,,Urine,2015-03-25,NA,No growth,1770706,NA,NA,NA
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Amp,Ampicillin,R
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Aug,Co-amoxiclav,R
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Caz,Ceftazidime,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Cet,Cefotaxime,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Cip,Ciprofloxacin,R
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Clx,Cefalexin,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Cxm,Cefuroxime,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Ert,Ertapenem,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Fos,Fosfomycin,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Gen,Gentamicin,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Mer,Meropenem,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Nit,Nitrofurantoin,S
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Taz,Piperacillin + Tazobactam,R
99999999999,AAA2,,Urine,2015-07-02,ECOL,Escherichia coli,1761696,Tri,Trimethoprim,R
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Amp,Ampicillin,R
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Aug,Co-amoxiclav,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Caz,Ceftazidime,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Cet,Cefotaxime,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Cip,Ciprofloxacin,R
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Clx,Cefalexin,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Cxm,Cefuroxime,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Ert,Ertapenem,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Fos,Fosfomycin,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Gen,Gentamicin,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Mer,Meropenem,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Nit,Nitrofurantoin,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Taz,Piperacillin + Tazobactam,S
99999999999,AAA1,,Urine,2014-08-03,ECOL,Escherichia coli,1519213,Tri,Trimethoprim,R